Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1024
(740 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 493 e-140
SB_56| Best HMM Match : Actin (HMM E-Value=0) 493 e-140
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 492 e-139
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 490 e-139
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 359 2e-99
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 333 1e-91
SB_54| Best HMM Match : Actin (HMM E-Value=0) 299 1e-81
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 269 1e-72
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 205 3e-53
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 173 1e-43
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 120 1e-27
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 111 6e-25
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 106 2e-23
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 71 7e-13
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 46 3e-05
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 43 2e-04
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 40 0.002
SB_30755| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.026
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.060
SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.080
SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19) 34 0.11
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.32
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.32
SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024) 33 0.32
SB_10963| Best HMM Match : DED (HMM E-Value=7.1e-12) 33 0.32
SB_11738| Best HMM Match : SH3_2 (HMM E-Value=3.7e-32) 32 0.42
SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45) 32 0.56
SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.56
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.74
SB_13911| Best HMM Match : PAN (HMM E-Value=0.033) 31 0.74
SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.74
SB_29377| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_14043| Best HMM Match : Extensin_1 (HMM E-Value=0.75) 31 1.3
SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1) 31 1.3
SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 30 1.7
SB_27518| Best HMM Match : RWD (HMM E-Value=0.015) 30 1.7
SB_23053| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_52278| Best HMM Match : Ery_res_leader1 (HMM E-Value=0.94) 30 2.3
SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4) 30 2.3
SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37) 30 2.3
SB_36880| Best HMM Match : DUF1337 (HMM E-Value=0.54) 29 3.0
SB_36012| Best HMM Match : DUF755 (HMM E-Value=0.064) 29 3.0
SB_48528| Best HMM Match : Extensin_2 (HMM E-Value=1) 29 4.0
SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062) 29 4.0
SB_35820| Best HMM Match : TRAP_240kDa (HMM E-Value=0.006) 29 5.2
SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_25899| Best HMM Match : Ribonuc_2-5A (HMM E-Value=0) 29 5.2
SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74) 29 5.2
SB_22949| Best HMM Match : rve (HMM E-Value=1.2e-19) 29 5.2
SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_6983| Best HMM Match : rve (HMM E-Value=0.011) 29 5.2
SB_4647| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20) 29 5.2
SB_46336| Best HMM Match : DUF1518 (HMM E-Value=5.6) 29 5.2
SB_42612| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_40683| Best HMM Match : VWD (HMM E-Value=2.4e-05) 29 5.2
SB_11585| Best HMM Match : TPR_MLP1_2 (HMM E-Value=2.2) 29 5.2
SB_1754| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42) 28 6.9
SB_34370| Best HMM Match : DUF1656 (HMM E-Value=0.59) 28 6.9
SB_10665| Best HMM Match : PT (HMM E-Value=6.2) 28 6.9
SB_8208| Best HMM Match : ShTK (HMM E-Value=1.2e-21) 28 6.9
SB_8145| Best HMM Match : RNA_pol_Rpb2_6 (HMM E-Value=0) 28 6.9
SB_7840| Best HMM Match : S-antigen (HMM E-Value=0.11) 28 6.9
SB_53874| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.1
SB_41475| Best HMM Match : HSA (HMM E-Value=7.5) 28 9.1
SB_30534| Best HMM Match : EGF (HMM E-Value=0.12) 28 9.1
SB_20112| Best HMM Match : EGF (HMM E-Value=0) 28 9.1
SB_12796| Best HMM Match : Radical_SAM (HMM E-Value=8.9e-24) 28 9.1
SB_6096| Best HMM Match : Chitin_bind_3 (HMM E-Value=1.9e-06) 28 9.1
SB_3565| Best HMM Match : ASC (HMM E-Value=1.1e-12) 28 9.1
SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0) 28 9.1
SB_11044| Best HMM Match : FMO-like (HMM E-Value=3.4) 28 9.1
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 493 bits (1216), Expect = e-140
Identities = 231/239 (96%), Positives = 236/239 (98%)
Frame = +2
Query: 23 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 202
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 203 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLD 382
TQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLD
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLD 180
Query: 383 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKS 562
LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM TAASSSSLEKS
Sbjct: 181 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMTTAASSSSLEKS 240
Query: 563 YELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDXRKDLYANTV 739
YELPDGQVITIGNERFRCPEA+FQPSFLGME+ GIHETTYNSIMKCDVD RKDLYANTV
Sbjct: 241 YELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTV 299
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 493 bits (1215), Expect = e-140
Identities = 231/239 (96%), Positives = 236/239 (98%)
Frame = +2
Query: 23 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 202
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 60 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 119
Query: 203 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLD 382
TQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLD
Sbjct: 120 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLD 179
Query: 383 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKS 562
LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM TAASSSSLEKS
Sbjct: 180 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSLEKS 239
Query: 563 YELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDXRKDLYANTV 739
YELPDGQVITIGNERFRCPEA+FQPSFLGME+ GIHETTYNSIMKCDVD RKDLYANTV
Sbjct: 240 YELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTV 298
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 492 bits (1213), Expect = e-139
Identities = 230/239 (96%), Positives = 236/239 (98%)
Frame = +2
Query: 23 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 202
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 203 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLD 382
TQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLD
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLD 180
Query: 383 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKS 562
LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM TAASSSSLEKS
Sbjct: 181 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMETAASSSSLEKS 240
Query: 563 YELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDXRKDLYANTV 739
YELPDGQVITIGNERFRCPEA+FQPSFLGME+ GIHETTYNSIMKCDVD RKDLYANTV
Sbjct: 241 YELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTV 299
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 490 bits (1208), Expect = e-139
Identities = 230/239 (96%), Positives = 236/239 (98%)
Frame = +2
Query: 23 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 202
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 60 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 119
Query: 203 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLD 382
TQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLD
Sbjct: 120 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLD 179
Query: 383 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKS 562
LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL YVALDFEQEMATAA+SSSLEKS
Sbjct: 180 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLAYVALDFEQEMATAAASSSLEKS 239
Query: 563 YELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDXRKDLYANTV 739
YELPDGQVITIGNERFRCPEA+FQPSFLGME+ GIHETTYNSIMKCDVD RKDLYANTV
Sbjct: 240 YELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTV 298
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 359 bits (882), Expect = 2e-99
Identities = 170/184 (92%), Positives = 178/184 (96%)
Frame = +2
Query: 188 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 367
N + M +IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHA
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHA 137
Query: 368 ILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSS 547
I+RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM TAASSS
Sbjct: 138 IIRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSS 197
Query: 548 SLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDXRKDLY 727
SLEKSYELPDGQVITIGNERFRCPEA+FQPSFLGME+ GIHETTYNSIMKCDVD RKDLY
Sbjct: 198 SLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLY 257
Query: 728 ANTV 739
ANTV
Sbjct: 258 ANTV 261
Score = 64.1 bits (149), Expect = 1e-10
Identities = 28/31 (90%), Positives = 28/31 (90%)
Frame = +2
Query: 23 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 115
SKRGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 60 SKRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 333 bits (818), Expect = 1e-91
Identities = 175/241 (72%), Positives = 190/241 (78%), Gaps = 2/241 (0%)
Frame = +2
Query: 23 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 202
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 203 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYE--GYALPHAILR 376
TQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGVSHTVPIYE GY+ R
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEERGYSFTTTAER 180
Query: 377 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLE 556
+ RD+ + L + + E+E+ + A ++SS +E
Sbjct: 181 EIV--RDIKEKLCYVALD--------FEQEM-----------------QTAASSSS--IE 211
Query: 557 KSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDXRKDLYANT 736
KSYELPDGQVITIGNERFRCPEAL QPSFLGME+ GIHETTYNSIMKCDVD RKDLYANT
Sbjct: 212 KSYELPDGQVITIGNERFRCPEALLQPSFLGMESSGIHETTYNSIMKCDVDIRKDLYANT 271
Query: 737 V 739
V
Sbjct: 272 V 272
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 299 bits (735), Expect = 1e-81
Identities = 136/215 (63%), Positives = 169/215 (78%)
Frame = +2
Query: 95 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 274
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 275 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 454
ASGRTTG V D GDGVSHTVP+Y+GY LPHA R+DLAGRDLT YL +++TERGYSF +T
Sbjct: 2189 ASGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLAGRDLTHYLQRLVTERGYSFQST 2248
Query: 455 AEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQ 634
AE++I+RD+KE LCY A+D+E+E+ A +S E Y LPDGQ I IG+ERFR E LFQ
Sbjct: 2249 AEQQIIRDLKETLCYCAMDYERELKEAETSDDCEAPYMLPDGQSIRIGSERFRAAEPLFQ 2308
Query: 635 PSFLGMEACGIHETTYNSIMKCDVDXRKDLYANTV 739
PS LG + GIHE+ + SI KCD+D R +L+ N V
Sbjct: 2309 PSLLGRDIDGIHESIFKSIKKCDIDLRAELFHNIV 2343
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 269 bits (660), Expect = 1e-72
Identities = 120/238 (50%), Positives = 166/238 (69%), Gaps = 1/238 (0%)
Frame = +2
Query: 29 RGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMT 205
R +L + YP+++GIV NWDDM+ +W +TF +++ + P VLLTE PLNP NREKM
Sbjct: 65 RYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNREKMI 124
Query: 206 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 385
++MFE + +Y+AIQAVL+LYA G TG+V+DSGDGV+H P+YEG+ALPH RLD+
Sbjct: 125 EVMFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGVTHICPVYEGFALPHLTRRLDI 184
Query: 386 AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY 565
AGRD+T YL+K++ RGY+F TA+ E VR +KEKLCYV + EQE A ++ L + Y
Sbjct: 185 AGRDITKYLIKLMLLRGYAFNHTADFETVRMMKEKLCYVGYNIEQEQKLALETTVLVEQY 244
Query: 566 ELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDXRKDLYANTV 739
LPDG+V+ + ERF PEALFQP + +E G+ E +N+I D+D R + Y + V
Sbjct: 245 TLPDGRVVKLSGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIV 302
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 205 bits (500), Expect = 3e-53
Identities = 96/106 (90%), Positives = 102/106 (96%)
Frame = +2
Query: 209 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 388
IMFE FN+PA+YVAIQAVLSLYASGRTTG+V DSGDGVSH VPIYEGYALPHAILRLDLA
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLA 60
Query: 389 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 526
GRDLTDYLMK++TERGYSFTTTAEREIVRDIKEKLCYVALDF QE+
Sbjct: 61 GRDLTDYLMKLMTERGYSFTTTAEREIVRDIKEKLCYVALDFYQEI 106
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 173 bits (421), Expect = 1e-43
Identities = 82/151 (54%), Positives = 112/151 (74%)
Frame = +2
Query: 143 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 322
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+GRTTG+VLD+GDGV
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGV 185
Query: 323 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 502
SH+VPIYEG+A+PH+I+R D+AGRD++ YL +L + G+ F +++E EIVR IKE+
Sbjct: 186 SHSVPIYEGFAMPHSIMRTDIAGRDVSRYLRLLLRKEGHCFHSSSELEIVRTIKEE---- 241
Query: 503 ALDFEQEMATAASSSSLEKSYELPDGQVITI 595
S S + Y LPDG +I +
Sbjct: 242 ------------SMESERQQYALPDGSIIEV 260
>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
Length = 149
Score = 120 bits (289), Expect = 1e-27
Identities = 54/68 (79%), Positives = 60/68 (88%)
Frame = +2
Query: 536 ASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDXR 715
A+S LEK+YELPDGQVI+IGNERFRCPEA+FQP+FLGMEA GIHE YN IMKCDVD R
Sbjct: 5 ANSPILEKTYELPDGQVISIGNERFRCPEAMFQPAFLGMEAPGIHEAIYNCIMKCDVDIR 64
Query: 716 KDLYANTV 739
KDLY+N V
Sbjct: 65 KDLYSNCV 72
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 111 bits (267), Expect = 6e-25
Identities = 57/132 (43%), Positives = 82/132 (62%), Gaps = 1/132 (0%)
Frame = +2
Query: 254 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE- 430
Q LSLYASG T G+ L SG + IYEG+ L H + L++ G LT+ L + L +
Sbjct: 767 QLSLSLYASGMTLGVCLSSGFSCTQAAVIYEGHTLNHTLQTLEIGGHHLTENLKQYLRDQ 826
Query: 431 RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERF 610
RG++FT+++ +IV DIKEK+CY++ D +E+ ++ L K Y LPDGQ+I+IG E
Sbjct: 827 RGHNFTSSSGWQIVNDIKEKICYLSKDHLKEVHNYKTNEGLTKFYTLPDGQMISIGYECI 886
Query: 611 RCPEALFQPSFL 646
E LF+P L
Sbjct: 887 SSMEPLFRPDLL 898
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 106 bits (254), Expect = 2e-23
Identities = 47/126 (37%), Positives = 80/126 (63%)
Frame = +2
Query: 53 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 232
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 233 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 412
PA ++ +VL+ +A+GR+ G+V+DSG + VP+++GY L AI+R LAG +T
Sbjct: 63 PAFFLCKNSVLTAFANGRSNGLVIDSGATQTSAVPVHDGYVLQQAIVRSPLAGDFITAQC 122
Query: 413 MKILTE 430
++ E
Sbjct: 123 RQMFEE 128
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 71.3 bits (167), Expect = 7e-13
Identities = 36/104 (34%), Positives = 56/104 (53%), Gaps = 1/104 (0%)
Frame = +2
Query: 221 TFNTPAMYVAIQAVLSLYASGRT-TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 397
++ T A+ + S RT TG V+DSGDGV+H +P+ EGY + I + +AGRD
Sbjct: 38 SYATKAVLALAASWTSRQVGERTLTGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRD 97
Query: 398 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMA 529
+T ++ ++L ER E + IKE+ Y+ D +E A
Sbjct: 98 ITFFVQQLLREREMGIPPEQSMETAKTIKERWGYICPDIAKEFA 141
Score = 36.3 bits (80), Expect = 0.026
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +2
Query: 587 ITIGNERFRCPEALFQPSFLGME-ACGIHETTYNSIMKCDVDXRKDLYANTV 739
+ + ERF PE F P F + + E N I C +D R+ LY N V
Sbjct: 196 VDVAYERFLGPEIFFHPEFSNPDFTTPLSEVVDNVIQNCPIDVRRPLYKNIV 247
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 46.0 bits (104), Expect = 3e-05
Identities = 18/38 (47%), Positives = 23/38 (60%)
Frame = +2
Query: 47 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 160
K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 299 KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 32.3 bits (70), Expect = 0.42
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +2
Query: 290 TGIVLDSGDGVSHTVPI 340
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 43.2 bits (97), Expect = 2e-04
Identities = 45/184 (24%), Positives = 76/184 (41%), Gaps = 9/184 (4%)
Frame = +2
Query: 53 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 232
P + G + NWD ++IW +TF E + M +I+FE +N
Sbjct: 292 PFQKGFLVNWDVEKQIWDYTFGKE--------------------GLEDAMDEILFEEYNF 331
Query: 233 PAMYVAIQAVLSLY------ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGR 394
A+ A LS Y S +V+D+G +H VP++ G + A+ R
Sbjct: 332 KALSRTTAAQLSAYKCHQDMVSKNPVCLVVDTGYSFTHIVPVFNGKVIKKAVRR------ 385
Query: 395 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA---ASSSSLEKSY 565
+ +L E +F ++ +KE CYV+ F ++M A +++ + Y
Sbjct: 386 -----QLHVLDE---TF-------VINQVKEDTCYVSSQFYKDMEIARQRGKENTIVREY 430
Query: 566 ELPD 577
LPD
Sbjct: 431 VLPD 434
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/68 (29%), Positives = 38/68 (55%)
Frame = +2
Query: 98 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 277
I H F + L+V P +H V++T +E++ +I+ F A+Y+ Q++L++Y+
Sbjct: 513 ILEHAFLS-LKVDPVKHKVIMTIPQNTGLQEKEELVEILLGYFRVQAVYLQEQSILAMYS 571
Query: 278 SGRTTGIV 301
+GIV
Sbjct: 572 YSAVSGIV 579
>SB_30755| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 906
Score = 36.3 bits (80), Expect = 0.026
Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Frame = +3
Query: 495 ATSLLTSSRKWPPL--HPAAPSRSLTNFP---TVRSSLSETKDSVAQRLSSNPRSWVWKL 659
+TS +T S K+PP+ +PA PS L P TV SLS T S+P S V L
Sbjct: 452 STSSITGSSKYPPVSPNPAKPSNILFEGPSSSTVFKSLSPTDQMSNSPSQSSPGSSVSDL 511
Query: 660 AASTRPHI 683
+ S+ P++
Sbjct: 512 SCSSDPNV 519
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 35.1 bits (77), Expect = 0.060
Identities = 17/46 (36%), Positives = 20/46 (43%)
Frame = +3
Query: 234 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 371
PP P P + TRP VP +T PTP P T P P+
Sbjct: 919 PPPLPPPPPPIQTTRPTVPTTPTTQASTTRPTPPPPTSALPPPIPA 964
Score = 28.3 bits (60), Expect = 6.9
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +3
Query: 213 CSKHSTRPPCTSPSKPCSRCTRPVVPPVSCW--TPATVSPTPCPSTKDTHSPTPSC 374
CS+HS +P C PSK C + V+PP + T ++ P C ++ P C
Sbjct: 1521 CSEHSCKPEC--PSKCCMK----VLPPTTLGQNTANSLCPVYCLTSCKPDCPIKCC 1570
Score = 27.9 bits (59), Expect = 9.1
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +3
Query: 234 PPCTSPSKPCSRCTRPVVPPVSC 302
PP P P T P +PP SC
Sbjct: 973 PPLPPPPPPVQTTTAPTLPPASC 995
>SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 336
Score = 34.7 bits (76), Expect = 0.080
Identities = 29/77 (37%), Positives = 34/77 (44%)
Frame = +1
Query: 244 RRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHRLPHEDP 423
RR S A R RS R R+ RRR RR R+P H S SRSR R P
Sbjct: 211 RRSHSPAHHRRSRSRSRSRSPRRRRRSRSPRRRRRSRSPSPHHRSHRSRSR-SRSPRRRH 269
Query: 424 HRARLLVHYHRRAGNRS 474
R+R H R+ + S
Sbjct: 270 SRSRSPTHRRHRSRSHS 286
>SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1202
Score = 34.3 bits (75), Expect = 0.11
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +3
Query: 234 PPCTSP-SKPCSRCTRPVVPPVSCWTPATVSPTP-CPSTKDTHSPTPS 371
P TSP + P +R P+ PP C + V PTP S+K + SP+PS
Sbjct: 316 PAFTSPPNTPTTRTFSPISPPAGC-AASPVPPTPPAISSKRSFSPSPS 362
>SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19)
Length = 1211
Score = 34.3 bits (75), Expect = 0.11
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 222 HSTRP-PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPC 335
H+T P P T PS P C + P C+T T+SP PC
Sbjct: 665 HTTHPSPATHPS-PSQPCPATHLSPKPCFTFVTLSPKPC 702
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +3
Query: 237 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPC 335
PC SPS P + P C+T T+SP PC
Sbjct: 510 PCFSPSNPSPASH---LSPKPCFTSLTLSPKPC 539
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 33.5 bits (73), Expect = 0.18
Identities = 23/52 (44%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +3
Query: 222 HSTRPPCTSPSKPCSRCTRPVVP--PVSCWTPATVSPTPCPSTKDTHSPTPS 371
HST ++PS P + CT P P P + TP+T S PST T S TPS
Sbjct: 63 HSTPSAPSTPSTPSTPCT-PSTPSTPSTPSTPSTPSTPSAPSTPSTPS-TPS 112
Score = 30.3 bits (65), Expect = 1.7
Identities = 25/56 (44%), Positives = 31/56 (55%), Gaps = 5/56 (8%)
Frame = +3
Query: 219 KHSTRPPCTSPSKPCSRCTRPVVP--PVSCWTPATVSPTPC-PSTKDTHSP--TPS 371
K+ R ++PS PC+ T P P P + TP+T S TPC PST T S TPS
Sbjct: 2 KNPHRLKLSTPSTPCTPST-PSTPSTPSTPRTPSTPS-TPCTPSTPSTPSTPITPS 55
Score = 28.7 bits (61), Expect = 5.2
Identities = 22/45 (48%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Frame = +3
Query: 243 TSPSKPCSRCTRPVVP--PVSCWTPATVSPTPC-PSTKDTHSPTP 368
++PS PC+ T P P P + TP+T S TPC PST T S TP
Sbjct: 375 STPSTPCTPST-PSTPSTPSTPRTPSTPS-TPCTPSTPSTPS-TP 416
Score = 28.3 bits (60), Expect = 6.9
Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +3
Query: 216 SKHSTRPPCTSPSKPCSRCTRPVVP--PVSCWTPATVSPTPCPSTKDTHSPTPS 371
S ST +PS P + CT P P P + TP+T S TPC + + TPS
Sbjct: 22 STPSTPSTPRTPSTPSTPCT-PSTPSTPSTPITPSTPS-TPCTHSTPSAPSTPS 73
Score = 27.9 bits (59), Expect = 9.1
Identities = 28/91 (30%), Positives = 34/91 (37%), Gaps = 4/91 (4%)
Frame = +3
Query: 111 PSTMSCVSPPRNTQSCSXXXXXXXXXXXXXXXXXCSKHSTRPPCTSPSKPCSRCTRPVVP 290
PST S S P ++ S + + PCT S P + T P P
Sbjct: 18 PSTPSTPSTPSTPRTPSTPSTPCTPSTPSTPSTPITPSTPSTPCTH-STPSAPST-PSTP 75
Query: 291 PVSCW--TPATVSPTPCPSTKDTHS--PTPS 371
C TP+T S PST T S TPS
Sbjct: 76 STPCTPSTPSTPSTPSTPSTPSTPSAPSTPS 106
>SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1071
Score = 32.7 bits (71), Expect = 0.32
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 9/51 (17%)
Frame = +3
Query: 237 PCTSPSKPC----SRCTRPVVPPVSCWTPATVSPTPC-----PSTKDTHSP 362
P T PC + CT+ +P +TP T TPC PST+ +H+P
Sbjct: 844 PSTKRYTPCYERYTPCTKRYIPSAKRYTPCTERYTPCTKRYTPSTEPSHAP 894
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
Frame = +3
Query: 213 CSKHSTRPPCTSPSKPCSR----CTRPVVPPVSCWTPATVSPTPC 335
C++ T PCT PC+ CT P +TP+T TPC
Sbjct: 626 CTERYT--PCTERYIPCTERYTPCTERYTPSTERYTPSTERYTPC 668
Score = 29.1 bits (62), Expect = 4.0
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 4/37 (10%)
Frame = +3
Query: 237 PCTSPSKPC----SRCTRPVVPPVSCWTPATVSPTPC 335
PCT PC + CT+ P +TP T TPC
Sbjct: 746 PCTERYTPCYERYTPCTKRYTPCTERYTPCTERYTPC 782
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 32.7 bits (71), Expect = 0.32
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = +3
Query: 234 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 371
P SP+ P P P + TP T +PT TK T + TP+
Sbjct: 56 PTTPSPTAPTQTTPTPATPTPTTPTPKTPTPTTSTLTKPTPATTPT 101
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +3
Query: 228 TRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 371
T P T+P++ T P + TP +PTP T T +PT S
Sbjct: 42 TTPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPTPTTS 89
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +3
Query: 234 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPT-PCPSTKDTHSPTPS 371
P +P+KP P + TP T SPT P +T +PTP+
Sbjct: 31 PTTHTPTKPSPTTPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPT 77
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = +3
Query: 225 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPT 365
+T P T K + T + P TP PTP T T +PT
Sbjct: 72 ATPTPTTPTPKTPTPTTSTLTKPTPATTPTPTKPTPTAHTPTTPTPT 118
Score = 29.5 bits (63), Expect = 3.0
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 6/52 (11%)
Frame = +3
Query: 228 TRP-PCTSPS--KPCSRCTRPVVPPVSCWTPATVSP-TPCPS--TKDTHSPT 365
T+P P T+P+ KP P P + TP +P TP P+ T H+PT
Sbjct: 92 TKPTPATTPTPTKPTPTAHTPTTPTPTAHTPTKPTPKTPTPTTPTPTAHTPT 143
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +3
Query: 228 TRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSP-TPS 371
T+P T+P+ T P S P +PTP T T +P TP+
Sbjct: 37 TKPSPTTPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPT 85
Score = 28.7 bits (61), Expect = 5.2
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 3/52 (5%)
Frame = +3
Query: 225 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSP---TPCPSTKDTHSPTPS 371
ST P T+P+ T P + TP +P TP P+T PTP+
Sbjct: 46 STAPTQTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPTPTTSTLTKPTPA 97
Score = 28.3 bits (60), Expect = 6.9
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +3
Query: 234 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPT 329
P +P+KP + P P + TP T +PT
Sbjct: 117 PTAHTPTKPTPKTPTPTTPTPTAHTPTTPTPT 148
>SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024)
Length = 286
Score = 32.7 bits (71), Expect = 0.32
Identities = 21/88 (23%), Positives = 30/88 (34%)
Frame = +3
Query: 108 IPSTMSCVSPPRNTQSCSXXXXXXXXXXXXXXXXXCSKHSTRPPCTSPSKPCSRCTRPVV 287
+PS M C PP S + T T+P+ P + T P
Sbjct: 86 LPSWMPCNCPPDEDDSKGGAAGAEEKEEGEGGGDTPTTAPTTA-ATTPTTPTTAPTTPTT 144
Query: 288 PPVSCWTPATVSPTPCPSTKDTHSPTPS 371
P + TP T + TP +P P+
Sbjct: 145 PTTAATTPTTAATTPAAGAAAAAAPPPA 172
>SB_10963| Best HMM Match : DED (HMM E-Value=7.1e-12)
Length = 349
Score = 32.7 bits (71), Expect = 0.32
Identities = 21/74 (28%), Positives = 34/74 (45%)
Frame = +2
Query: 398 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPD 577
+T+ L+++ +R + F + RD L V L + T ASS S +S LPD
Sbjct: 216 VTEELVQLAAKRTFVFKVEMDETEYRDALLDLLVVKLQANGLLKTIASSRSRRRSKSLPD 275
Query: 578 GQVITIGNERFRCP 619
+ + + R CP
Sbjct: 276 LASLVLNSSR-ECP 288
>SB_11738| Best HMM Match : SH3_2 (HMM E-Value=3.7e-32)
Length = 2436
Score = 32.3 bits (70), Expect = 0.42
Identities = 46/161 (28%), Positives = 60/161 (37%), Gaps = 2/161 (1%)
Frame = +1
Query: 232 ARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHRLP 411
ARH RH V + HR R GL R + H RIR GL+R HR+
Sbjct: 1263 ARHRIRH-GLXXXXHVLARHRIRHGLARHRIRHGLARHRIR-------HGLAR---HRIR 1311
Query: 412 HE-DPHRARLLVHYHRRAGNRS*HQGEAVLRRS*LRAG-NGHRCIQQLPREVLRTSRRSG 585
H HR R + H + H+ L R +R G HR L R +R
Sbjct: 1312 HGLALHRIRCGLARHTIRRGLARHRTRHGLARHTIRHGLTRHRTRHGLARHTIR--HGLA 1369
Query: 586 HHYRKRKIPLPRGSLPTLVLGYGSLRHPRDHI*LHHEVRRG 708
H + + R L + +G RH H H +R G
Sbjct: 1370 RHTIRHGLAEHRHGLAWHRIRHGLPRHRTRHGLARHRIRSG 1410
Score = 27.9 bits (59), Expect = 9.1
Identities = 44/145 (30%), Positives = 57/145 (39%), Gaps = 5/145 (3%)
Frame = +1
Query: 289 HRYRAGLRRRCLPHRAHLRRIRTP-PRHPAS-GLSRSRPHRLPHE-DPHRARLLVHYHRR 459
HR R GL R + H RIR RH GL+R HR+ H HR R + HR
Sbjct: 1184 HRIRHGLARHTIRHGLARHRIRHGLARHRIRLGLAR---HRIRHGLARHRIRHGLARHRT 1240
Query: 460 AGNRS*HQGEAVLRRS*LRAGNG-HRCIQQLPREVLRTSR-RSGHHYRKRKIPLPRGSLP 633
+ H+ L R +R G HR L +R R H + +I R L
Sbjct: 1241 RHGLARHRIRHGLARHRIRHGLARHRIRHGLXXXXHVLARHRIRHGLARHRI---RHGLA 1297
Query: 634 TLVLGYGSLRHPRDHI*LHHEVRRG 708
+ +G RH H H +R G
Sbjct: 1298 RHRIRHGLARHRIRHGLALHRIRCG 1322
>SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45)
Length = 649
Score = 31.9 bits (69), Expect = 0.56
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +3
Query: 231 RPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHS 359
+PP T+PSK T P+ P++ TP T T +TK T S
Sbjct: 383 KPPTTTPSK----ATAPISDPMTTTTPTTTKATTPTTTKATAS 421
>SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 40
Score = 31.9 bits (69), Expect = 0.56
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +2
Query: 617 PEALFQPSFLGMEACGIHET 676
PE +FQPS LG+E GI ET
Sbjct: 3 PEIIFQPSMLGLEQAGITET 22
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 31.5 bits (68), Expect = 0.74
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +2
Query: 44 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP--EEHPVLLTEAPLNPKANRE 196
L+ P + +VT+++ E++ H F + P HPV++TE NP R+
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_13911| Best HMM Match : PAN (HMM E-Value=0.033)
Length = 534
Score = 31.5 bits (68), Expect = 0.74
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +2
Query: 185 ANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 301
A +E++ +I+ F A+Y+ Q++L++Y+ +GIV
Sbjct: 420 AKKEELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIV 458
>SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 172
Score = 31.5 bits (68), Expect = 0.74
Identities = 16/73 (21%), Positives = 30/73 (41%)
Frame = -3
Query: 390 PAKSRRRMAWGSAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAWMATYMAGVLNVSNM 211
P+ + +W P T W +PSP+ T P ++T+W + +S++
Sbjct: 93 PSPQYKTTSWSLPLPQHKTTSWSSPSPKYKTTSWTSPSPQYKTTSWSSPLPQQTTFLSSL 152
Query: 210 IWVIFSLLALGLR 172
+I L + R
Sbjct: 153 YHIIGRLSGVHYR 165
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/46 (26%), Positives = 19/46 (41%)
Frame = -3
Query: 390 PAKSRRRMAWGSAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAW 253
P + S +P T W +PSP+ T P ++T+W
Sbjct: 57 PLSQYKTTFMSSTFPQHKTTSWTSPSPQYKTTSWTSPSPQYKTTSW 102
Score = 28.3 bits (60), Expect = 6.9
Identities = 12/46 (26%), Positives = 19/46 (41%)
Frame = -3
Query: 390 PAKSRRRMAWGSAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAW 253
P+ + +W S P T W P P+ T P ++T+W
Sbjct: 81 PSPQYKTTSWTSPSPQYKTTSWSLPLPQHKTTSWSSPSPKYKTTSW 126
>SB_29377| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 548
Score = 30.7 bits (66), Expect = 1.3
Identities = 40/127 (31%), Positives = 54/127 (42%)
Frame = +1
Query: 244 RRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHRLPHEDP 423
RR+ SR+ + R RS +R R+ R R R+ R+ S SRSR + P P
Sbjct: 147 RRYRSRSDS-RPRSRYRGRSRSRSRDRYRERRPRKSRSKSLD-RSRRSRSRSYSRPSPSP 204
Query: 424 HRARLLVHYHRRAGNRS*HQGEAVLRRS*LRAGNGHRCIQQLPREVLRTSRRSGHHYRKR 603
+R+R RR+ +RS RS R R + R R SRRS R R
Sbjct: 205 YRSRRSRSRTRRSRSRSRRS------RSRSRDRRPRRRSRDRERSRERRSRRSRDKSRSR 258
Query: 604 KIPLPRG 624
+ RG
Sbjct: 259 EKSRERG 265
>SB_14043| Best HMM Match : Extensin_1 (HMM E-Value=0.75)
Length = 568
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +3
Query: 222 HSTRPPCTSP--SKPCSRCTRPVVPPVSCWTPATVSP-TPCPSTKDTHSPTP 368
H+T+PP T P +KP + R PP + P T P T P T H+ P
Sbjct: 137 HTTKPPTTKPQTTKPHTTKPRTTKPPTT--KPHTTKPHTTKPHTTKPHTTKP 186
>SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1)
Length = 231
Score = 30.7 bits (66), Expect = 1.3
Identities = 31/125 (24%), Positives = 46/125 (36%)
Frame = +3
Query: 228 TRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*PVXXXXX 407
T P +P+ S P P + +T T S TP PS T S TP+ +T P
Sbjct: 15 TSTPSYTPTT--SYTPTPSYTPTTSYT-CTTSYTPTPSYTPTPSYTPTTSYT-PTTSYTP 70
Query: 408 XXXXXXXXXXXXXXXXXXGKSFVTSRRSCATSLLTSSRKWPPLHPAAPSRSLTNFPTVRS 587
S+ ++ T+ TS+ + P P+ S T P+ S
Sbjct: 71 TTSYTPTPSYTPTTSYTPTPSYTSTTSYTPTTSYTSTTSYTPTPSYTPTPSYTPTPSYTS 130
Query: 588 SLSET 602
+ S T
Sbjct: 131 TTSYT 135
Score = 27.9 bits (59), Expect = 9.1
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +3
Query: 213 CSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPAT-VSPTPCPSTKDTHSPTPS 371
C+ T P +P+ + T P + +TP T +PTP + +++PTPS
Sbjct: 40 CTTSYTPTPSYTPTPSYTPTTS--YTPTTSYTPTTSYTPTPSYTPTTSYTPTPS 91
>SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2149
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 243 TSPSKPCSRCTRPVVPPVSCWTPATVSP-TPCPSTK 347
+SP KP T+PVVP P+ + P P PS+K
Sbjct: 1511 SSPPKPVKPSTKPVVPVKPVKPPSPIKPKPPIPSSK 1546
>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +1
Query: 169 SPQPQGQQREDDPDHVRNIQHARHVRRHPSR 261
SP P+ R D+P V A HV HPSR
Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPSR 295
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +3
Query: 222 HSTRPPCT-SPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 371
H RPP S P +R T P P + PAT +PT +T + TP+
Sbjct: 27 HHQRPPLLPSQQLPHNRTTTPTTPTTTT-PPATTTPTKPTNTTPPATTTPT 76
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +3
Query: 225 STRPPCTSPSKPCSR---CTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 371
+T P T+P+KP + T P + PAT +PT +T + TP+
Sbjct: 137 TTPPATTTPTKPTTTTPPATTTPTKPTTTTPPATTTPTKSTTTTPPATTTPT 188
Score = 29.1 bits (62), Expect = 4.0
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
Frame = +3
Query: 225 STRPPCTSPSKPCSR---CTRPVVPPVSCWTPATVSPT-PCPSTKD-THSPTPSCVWT*P 389
+T P T+P+KP + T P + PAT +PT P +T T +PT S T P
Sbjct: 123 TTPPGTTTPTKPTTTTPPATTTPTKPTTTTPPATTTPTKPTTTTPPATTTPTKSTTTTPP 182
Score = 28.3 bits (60), Expect = 6.9
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = +3
Query: 225 STRPPC-TSPSKPCSR---CTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 371
+T PP T+P+KP + T P + PAT +PT +T + TP+
Sbjct: 52 TTTPPATTTPTKPTNTTPPATTTPTKPTTTTPPATTTPTTPTTTTPPATTTPT 104
Score = 28.3 bits (60), Expect = 6.9
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +3
Query: 225 STRPPCTSPSKPCSRC---TRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 371
+T P T+P+KP + T P + PAT +PT +T + TP+
Sbjct: 109 TTPPATTTPTKPTTTTPPGTTTPTKPTTTTPPATTTPTKPTTTTPPATTTPT 160
>SB_27518| Best HMM Match : RWD (HMM E-Value=0.015)
Length = 277
Score = 30.3 bits (65), Expect = 1.7
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +3
Query: 249 PSKPCSRCTRPVVPP 293
P++PCS CT+P +PP
Sbjct: 220 PTEPCSLCTKPALPP 234
>SB_23053| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 497
Score = 30.3 bits (65), Expect = 1.7
Identities = 23/83 (27%), Positives = 29/83 (34%)
Frame = +1
Query: 166 GSPQPQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLR 345
G G + PDH + R P L V R+ + GL +R PH
Sbjct: 320 GPDHTHGVSKRTAPDHPLGLSK----RTAPDHTLGVSKRTAPDHPHGLSKRTAPHHPLGL 375
Query: 346 RIRTPPRHPASGLSRSRPHRLPH 414
T P HP R+ P PH
Sbjct: 376 SKSTAPDHPHGVSKRTAPDH-PH 397
Score = 29.5 bits (63), Expect = 3.0
Identities = 20/71 (28%), Positives = 30/71 (42%)
Frame = +1
Query: 178 PQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRT 357
P G + PDH + ++H P L + R+ + G+ +R PH T
Sbjct: 192 PHGVSKRTAPDHPHGV--SKHTA--PDHTLGLSKRTGPDHTHGVSKRTAPHHPLGLSKHT 247
Query: 358 PPRHPASGLSR 390
P HP GLS+
Sbjct: 248 APDHP-HGLSK 257
>SB_52278| Best HMM Match : Ery_res_leader1 (HMM E-Value=0.94)
Length = 592
Score = 29.9 bits (64), Expect = 2.3
Identities = 30/103 (29%), Positives = 37/103 (35%)
Frame = +1
Query: 226 QHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHR 405
Q RRHP R R+ + G+R R P +RR RT R + R R H
Sbjct: 356 QRGERERRHPPGVAICRYRTRQVSQRGVRERRNPPGVAIRRYRT--RQVSQRGERERRHH 413
Query: 406 LPHEDPHRARLLVHYHRRAGNRS*HQGEAVLRRS*LRAGNGHR 534
P R R R R H G A+ R + G R
Sbjct: 414 -PGVAICRYRTRQVSQRGKRERRHHPGVAICRYRTRQTGESTR 455
>SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4)
Length = 1439
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = +3
Query: 234 PPCTSPSKPCSRCTRP-VVPPVSCWTPATVSPTPCPSTKDTHSPTP 368
PP T P+ P S P VP + P V+P P + PTP
Sbjct: 332 PPVTEPAPPSSVVAPPPAVPTPATAPPPVVAPPPSVFASSSGVPTP 377
>SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37)
Length = 1632
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 5/38 (13%)
Frame = +3
Query: 237 PCTSPSKPCSRCTRPVVPPVS-----CWTPATVSPTPC 335
PC P PC P V PV C P V+ TPC
Sbjct: 551 PCVDPVTPCVDPVTPYVDPVKVSVTPCVDPVKVAVTPC 588
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +3
Query: 237 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPS 341
PC P PC P V PV V P PS
Sbjct: 376 PCVDPVTPCVDPVTPYVDPVKVAVTPCVDPVKVPS 410
>SB_36880| Best HMM Match : DUF1337 (HMM E-Value=0.54)
Length = 367
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +1
Query: 208 DHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIR 354
DH + I+ V RH L R R+ H +R L+ + H+A LR ++
Sbjct: 277 DHTQKIKEENKVLRHELLMLIRRTRALHEHREELQAQ---HKALLREVQ 322
>SB_36012| Best HMM Match : DUF755 (HMM E-Value=0.064)
Length = 265
Score = 29.5 bits (63), Expect = 3.0
Identities = 24/95 (25%), Positives = 37/95 (38%), Gaps = 2/95 (2%)
Frame = +1
Query: 343 RRIRTPPRHPASGLSRSRPHRLPHEDPHRARLLVHYHRRAGNRS--*HQGEAVLRRS*LR 516
+R R +H + +S S P R + + R H HR + + S H+ + R R
Sbjct: 159 QRERRLHKHSSPSISPSPPRRQKYSNGQSDRKGKHRHRDSSSPSPPRHRSRSPFRNGNKR 218
Query: 517 AGNGHRCIQQLPREVLRTSRRSGHHYRKRKIPLPR 621
G +Q R V KR++P PR
Sbjct: 219 KGFPTHRNKQRSRSVSPVQSGQASQVMKRRVPSPR 253
Score = 28.3 bits (60), Expect = 6.9
Identities = 23/89 (25%), Positives = 32/89 (35%), Gaps = 3/89 (3%)
Frame = +1
Query: 166 GSPQPQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLR 345
G P ED D + ++ R S + R+++ + R R H R
Sbjct: 82 GGPSRHNNASEDSFDSGEEEKRNKNSARKMSPINGHKSSRKSRHKSDKKERASRKRRHSR 141
Query: 346 RIRTPPRHPASGLS--RSRPHRL-PHEDP 423
P RHP+ S R R RL H P
Sbjct: 142 SESPPVRHPSGSQSGDRQRERRLHKHSSP 170
>SB_48528| Best HMM Match : Extensin_2 (HMM E-Value=1)
Length = 329
Score = 29.1 bits (62), Expect = 4.0
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 547 LPREVLRTSRRSGHHYRKRKIPLPRGSLP 633
LPR ++R HY++ +PLPRG P
Sbjct: 132 LPRGGSPLTKRRESHYQEEGVPLPRGGSP 160
Score = 28.3 bits (60), Expect = 6.9
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 547 LPREVLRTSRRSGHHYRKRKIPLPRGSLP 633
LPR ++R HY++ +PLPRG P
Sbjct: 154 LPRGGSPLTKRRESHYQEEGVPLPRGGGP 182
>SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1831
Score = 29.1 bits (62), Expect = 4.0
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +3
Query: 270 CTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 371
C+RP PPV+ T +T S T +T T + TP+
Sbjct: 620 CSRPTTPPVTT-TKSTTSSTTKGTTASTTTSTPT 652
>SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062)
Length = 406
Score = 29.1 bits (62), Expect = 4.0
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 5/55 (9%)
Frame = +3
Query: 219 KHSTRPPCTSPSKPCSRCTRPVVPPVSC----WTPAT-VSPTPCPSTKDTHSPTP 368
KH + P PS P S ++P + P T + PTP P T +PTP
Sbjct: 205 KHPSYPSYKHPSYPSSHIQASLLPHIQASLLPLIPNTSIPPTPTPHTSIPPTPTP 259
>SB_35820| Best HMM Match : TRAP_240kDa (HMM E-Value=0.006)
Length = 1382
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +3
Query: 489 SCATSLLTSSRKWPPLHPAAPSRSLTNFPTVRSSLSETKDSV 614
SCA S+ + L PA+P+ S++ F T++ T+ S+
Sbjct: 970 SCAEPRSIDSKHYTALSPASPASSISCFSTLQLKQMPTRSSI 1011
>SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +2
Query: 173 LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 301
+ PK ++ ++F F P M +A++ + A+G TGI+
Sbjct: 174 ITPKRATSQIIFVLFCIFGLPVMMLALKTAGDIIAAGLKTGII 216
>SB_25899| Best HMM Match : Ribonuc_2-5A (HMM E-Value=0)
Length = 603
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +1
Query: 553 REVLRTSRRSGHHYRKRKIPLPR--GSLPTLVLGYGSLRHPR 672
R++LR R HHYR+ + R G++P + Y + R PR
Sbjct: 521 RDLLRALRNKKHHYRELPDEVKRSLGTIPDEYVRYFTSRFPR 562
>SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74)
Length = 483
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +3
Query: 231 RPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 368
RPP + C+ C P + P T PTP P + + +P P
Sbjct: 135 RPPVCPCKQECNFCCIEEEKPTTTKKPTT-KPTPAPHSSPSPTPPP 179
>SB_22949| Best HMM Match : rve (HMM E-Value=1.2e-19)
Length = 158
Score = 28.7 bits (61), Expect = 5.2
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 585 SSLSETKDSVAQRLSSNPRSWVWK 656
S+ SETK SV +R + + W+W+
Sbjct: 96 STKSETKASVVERFNRTSKEWMWR 119
>SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2644
Score = 28.7 bits (61), Expect = 5.2
Identities = 17/47 (36%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = +3
Query: 243 TSPSKPCS-RCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVW 380
T P P + + T P P T TV PT PS D T C W
Sbjct: 1691 TCPITPVNAKPTNPWTTPAPSPTATTVGPTLAPSQWDCSFETNLCSW 1737
>SB_6983| Best HMM Match : rve (HMM E-Value=0.011)
Length = 251
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +3
Query: 273 TRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCV 377
T VVPP+ P V P+P + + SPTPSC+
Sbjct: 207 TPAVVPPI----PTLVVPSPL-TQPEVESPTPSCI 236
>SB_4647| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2735
Score = 28.7 bits (61), Expect = 5.2
Identities = 21/75 (28%), Positives = 36/75 (48%)
Frame = +1
Query: 172 PQPQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRI 351
PQ G EDD D+V+ ++ +RH + +V+ S RA RR R +R
Sbjct: 647 PQVDGANDEDDTDNVQLESRSQGQQRHSNSKSSVQSSSELVKRARTTRRLGVSRVKIRVS 706
Query: 352 RTPPRHPASGLSRSR 396
+T + P+ +R++
Sbjct: 707 QTHSQ-PSQATARTQ 720
>SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20)
Length = 3489
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +2
Query: 482 KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPE 622
+EK+ L+ E E A ++ LEK +L + +G+ER RC +
Sbjct: 2983 REKIVTSDLESELETERALQANELEKQNKLLEKLSADLGHERSRCED 3029
>SB_46336| Best HMM Match : DUF1518 (HMM E-Value=5.6)
Length = 187
Score = 28.7 bits (61), Expect = 5.2
Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
Frame = +3
Query: 249 PSKPCSRCTRPV--VPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*PV 392
PS P S PV V T T +PT C T + P+C+ PV
Sbjct: 85 PSSPVSPLPSPVPAVAATPSQTYCTSTPTSCTPTTTCYLQVPTCILIPPV 134
>SB_42612| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 28.7 bits (61), Expect = 5.2
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +3
Query: 219 KHSTRPPCTSPSKPCSRCT--RPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 371
K TRP TS + S+ RP P++ +P S + P+ D HSPT S
Sbjct: 428 KPVTRPKTTSGTLSVSKSIPPRPSTEPITTSSPYRHSWSYVPNFVDYHSPTSS 480
>SB_40683| Best HMM Match : VWD (HMM E-Value=2.4e-05)
Length = 2200
Score = 28.7 bits (61), Expect = 5.2
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Frame = +1
Query: 223 IQHARHVRRHPSRALAVRVRSYHRYRAGLRRRC---LPHRAHLRRIRT-PPRHPASGLSR 390
I H++ RH S+ L R R HR + RR + H ++L R R P ++ +
Sbjct: 1588 IHHSKEYYRHSSKILKSRTRHLHRVKKYWHRRINHKINHISNLLRPRNWVPPFNSTAMIF 1647
Query: 391 SRPH 402
+PH
Sbjct: 1648 GKPH 1651
>SB_11585| Best HMM Match : TPR_MLP1_2 (HMM E-Value=2.2)
Length = 610
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +3
Query: 246 SPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 368
+PS+ S PV S + T++ P P + DT SPTP
Sbjct: 306 TPSRLVSLQNSPVKMMRSTLSAQTLAENPIPESTDTTSPTP 346
>SB_1754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1521
Score = 28.7 bits (61), Expect = 5.2
Identities = 22/61 (36%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Frame = -3
Query: 324 ETPSPESSTIPVVRPDAYSESTAWMATYMAGVLNVSNMIWVIFSLLALG--LRGASVSRT 151
ETPSP + P PDA TAW + L S + V S G LRGA +
Sbjct: 90 ETPSPALESAPAAMPDA--TDTAWTCLIVTYYLE-SEALHVSASASRSGRRLRGADAGKR 146
Query: 150 G 148
G
Sbjct: 147 G 147
>SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42)
Length = 382
Score = 28.3 bits (60), Expect = 6.9
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +3
Query: 270 CTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*P 389
CT P ++ P T + T P TK P PS + T P
Sbjct: 150 CTGTPEPTITSKPPVTETTTTKPETKPPKPPAPSTIPTPP 189
>SB_34370| Best HMM Match : DUF1656 (HMM E-Value=0.59)
Length = 764
Score = 28.3 bits (60), Expect = 6.9
Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +1
Query: 202 DPDHV-RNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRH 369
DP HV R +RHVRR PS + VR ++ +RR L R H+R RH
Sbjct: 224 DPRHVKRKTLDSRHVRRKPSDSRHVRRKTLDSRH--VRRNTLDSR-HVRCNTLDSRH 277
>SB_10665| Best HMM Match : PT (HMM E-Value=6.2)
Length = 215
Score = 28.3 bits (60), Expect = 6.9
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +1
Query: 325 PHRAHLRRIRTPPR-HPASGLSRSRPHRLPHEDPH 426
PHR H+ RTP R H + PH P +PH
Sbjct: 161 PHRPHMDPTRTPHRPHMDPTRTSHGPHTDPTRNPH 195
>SB_8208| Best HMM Match : ShTK (HMM E-Value=1.2e-21)
Length = 226
Score = 28.3 bits (60), Expect = 6.9
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = +3
Query: 213 CSKHSTRPPCTSPSKPCSRCTRPVVPPVS--CWTPATVSPTPCPSTKDTHSPT 365
C +H T K C C + PP+ T T +PT P TK T +PT
Sbjct: 167 CRRHKTYMNIYC-RKSCGFCGKAPHPPIQEPPVTKTTTAPTEPPVTKTTTAPT 218
>SB_8145| Best HMM Match : RNA_pol_Rpb2_6 (HMM E-Value=0)
Length = 893
Score = 28.3 bits (60), Expect = 6.9
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -2
Query: 583 LTVGKFVRLLEGAAGCSGGHF 521
+TVGK + L+ G AG GHF
Sbjct: 366 MTVGKLIELIAGKAGVLEGHF 386
>SB_7840| Best HMM Match : S-antigen (HMM E-Value=0.11)
Length = 231
Score = 28.3 bits (60), Expect = 6.9
Identities = 29/101 (28%), Positives = 42/101 (41%), Gaps = 6/101 (5%)
Frame = -2
Query: 520 LLEVKSDVAQLLLDVTNDFPLGGGSERVAALGEDLHEVVCEVATG*VQTQDGVGECVS-- 347
++ V V ++L V + G G + + + +D V + A G V GVG+
Sbjct: 16 VVSVMMVVLVMMLMVRDSDDGGVGDDAIGRVSDD--GGVGDDADGRVSDDGGVGDDADGR 73
Query: 346 FVDGHGVGDTVAGVQHDTGG----TTGRVQREHGLDGDVHG 236
D GVGD G D GG GRV + G+ D G
Sbjct: 74 VSDDGGVGDDADGRVSDDGGVGDNAEGRVSDDGGVGDDAIG 114
>SB_53874| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 174
Score = 27.9 bits (59), Expect = 9.1
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +3
Query: 537 HPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRSWVWKLAASTRPHI 683
HP SR +N P V S + V R+ SN V+ S +PH+
Sbjct: 113 HPHVYSRVKSNHPHVYSRVKSNHPHVYSRVKSN-HPHVYSRVKSNQPHV 160
>SB_41475| Best HMM Match : HSA (HMM E-Value=7.5)
Length = 195
Score = 27.9 bits (59), Expect = 9.1
Identities = 19/76 (25%), Positives = 25/76 (32%)
Frame = +1
Query: 211 HVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPASGLSR 390
H + R H R RVR H YR HR H R+ + +
Sbjct: 119 HEYRVHRVHEYRVH--RVHEYRVRRVHEYRVHRVHEYRVHRVHEYRVHRVHEYRVHRVHE 176
Query: 391 SRPHRLPHEDPHRARL 438
R HR+ HR +
Sbjct: 177 YRVHRVHEYRVHRVHV 192
>SB_30534| Best HMM Match : EGF (HMM E-Value=0.12)
Length = 521
Score = 27.9 bits (59), Expect = 9.1
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +3
Query: 216 SKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTK 347
S+ ST+ P T KP + RP+ P + P + P P T+
Sbjct: 252 SQVSTKQPATERPKPRTEKPRPITQPPTTQRPRPKTRRPEPRTE 295
>SB_20112| Best HMM Match : EGF (HMM E-Value=0)
Length = 2112
Score = 27.9 bits (59), Expect = 9.1
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +3
Query: 219 KHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSC 374
KH T PP S + P P+S TP+ SP S+ +HS +C
Sbjct: 2062 KHHT-PPSAHSYGTSSYDSSPQKLPISYLTPSPESPKDWSSSPSSHSDWSNC 2112
>SB_12796| Best HMM Match : Radical_SAM (HMM E-Value=8.9e-24)
Length = 676
Score = 27.9 bits (59), Expect = 9.1
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +3
Query: 537 HPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRSWVWKLAASTRPHI 683
HP SR +N P V S + V R+ SN V+ S +PH+
Sbjct: 615 HPHVYSRVKSNHPHVYSRVKSNHPHVYSRVKSN-HPHVYSRVKSNQPHV 662
>SB_6096| Best HMM Match : Chitin_bind_3 (HMM E-Value=1.9e-06)
Length = 295
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +3
Query: 234 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTP 332
PP +P+ P T P VPP + P T P P
Sbjct: 227 PPTKAPTDPPVPPTNPPVPPTNPPAPPTNPPKP 259
>SB_3565| Best HMM Match : ASC (HMM E-Value=1.1e-12)
Length = 575
Score = 27.9 bits (59), Expect = 9.1
Identities = 16/45 (35%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = +3
Query: 234 PPCTSPSKPCSRCTRPVVPPVSCWTP-ATVSPTPCPSTKDTHSPT 365
PP T+P P P + T AT PT P+T T PT
Sbjct: 1 PPVTTPVPTTESTAVPTTAPTTEQTTVATTIPTTIPTTVPTTEPT 45
>SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 1568
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/40 (32%), Positives = 15/40 (37%)
Frame = +3
Query: 255 KPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSC 374
K C R VPPVS +P PC P +C
Sbjct: 637 KAFGECGRTTVPPVSTSSPTPTPQDPCTGFNCDTPPYSTC 676
>SB_11044| Best HMM Match : FMO-like (HMM E-Value=3.4)
Length = 781
Score = 27.9 bits (59), Expect = 9.1
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = +3
Query: 237 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT 383
P +P+ P S+ T PP+ TP + TP P+ + + P T
Sbjct: 19 PAPTPTTPTSQATTASGPPII--TPIPLKETPTPALESAPAAMPDATDT 65
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,040,262
Number of Sequences: 59808
Number of extensions: 645908
Number of successful extensions: 3021
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 2379
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2934
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1998111622
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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