Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1022
         (700 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23511-7|AAC46795.1|  435|Caenorhabditis elegans Hypothetical pr...    30   1.8  
U39678-7|AAK39210.1|  193|Caenorhabditis elegans Hypothetical pr...    29   2.4  
Z78540-4|CAB01734.2|  624|Caenorhabditis elegans Hypothetical pr...    29   3.2  
U29380-1|AAA68740.1|  346|Caenorhabditis elegans Hypothetical pr...    29   3.2  
AL023828-26|CAA19455.2|  431|Caenorhabditis elegans Hypothetical...    29   3.2  
AL023828-12|CAA19456.1|  492|Caenorhabditis elegans Hypothetical...    29   3.2  
AC024838-7|AAF60820.1|  381|Caenorhabditis elegans Hypothetical ...    29   3.2  
AC024838-3|AAF60821.1|  381|Caenorhabditis elegans Hypothetical ...    29   3.2  

>U23511-7|AAC46795.1|  435|Caenorhabditis elegans Hypothetical
           protein C32D5.7 protein.
          Length = 435

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 17/47 (36%), Positives = 22/47 (46%)
 Frame = +2

Query: 134 SRLRMELPRLE*SMDGAARSGPPIRRLASSGCYXTRNFRRQIPVRAG 274
           S L   +  LE +M  A    PP+ R  S     + NF RQ P+R G
Sbjct: 344 STLESNISGLEEAMGKATGGTPPVHRNPSPPVIPSLNFSRQDPLRQG 390


>U39678-7|AAK39210.1|  193|Caenorhabditis elegans Hypothetical
           protein C39D10.5 protein.
          Length = 193

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 17/57 (29%), Positives = 26/57 (45%)
 Frame = -3

Query: 173 YFIPNVVAPYGVSSEFVHRVSXPRP*LCQS*GFLDCREXHRNQLPASREXPSARQTQ 3
           YF+PN++APY   +E +       P +  + G L   +   N  P S+  P    TQ
Sbjct: 17  YFVPNIMAPY--VTELMELAFRDVPGITVAAGILGASQDAVNGTPLSQAVPEPDSTQ 71


>Z78540-4|CAB01734.2|  624|Caenorhabditis elegans Hypothetical
           protein C33G3.6 protein.
          Length = 624

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 14/62 (22%), Positives = 28/62 (45%)
 Frame = +3

Query: 291 LDGELQRPYDATYVFAQVNADKILWKYSGEIQPLKLMERDTTVYRAEYFNQSDWKNGKRG 470
           L+ E+Q+ Y+  Y  + +N+ +   KY      +   +R+  VY  + + Q +W      
Sbjct: 295 LEPEMQKSYNNDYRQSSINSHQD--KYENSSNGINYTDRNQDVYNNKSYGQQEWLKNTSS 352

Query: 471 YH 476
            H
Sbjct: 353 DH 354


>U29380-1|AAA68740.1|  346|Caenorhabditis elegans Hypothetical
           protein ZK546.7 protein.
          Length = 346

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 14/41 (34%), Positives = 18/41 (43%)
 Frame = +1

Query: 148 GATTFGMKYGWSGQIWAPNTEAGKLWMLXHKKLQKTNSGAG 270
           G    G +YGW     A N +AGK+W   H    K +   G
Sbjct: 250 GPHVVGYEYGWIPFPEAANFDAGKIWKPVHVNNHKGDISVG 290


>AL023828-26|CAA19455.2|  431|Caenorhabditis elegans Hypothetical
           protein Y17G7B.10a protein.
          Length = 431

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
 Frame = +3

Query: 465 RGYHRHIQIPGTNARRENDNGKSVAQXREH--LRSVLF 572
           RGY  H+ I G  + R ND  ++V + R+   LR+V+F
Sbjct: 393 RGYDAHLVIDGGISYRFNDGSEAVMEVRDEDTLRTVVF 430


>AL023828-12|CAA19456.1|  492|Caenorhabditis elegans Hypothetical
           protein Y17G7B.10b protein.
          Length = 492

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
 Frame = +3

Query: 465 RGYHRHIQIPGTNARRENDNGKSVAQXREH--LRSVLF 572
           RGY  H+ I G  + R ND  ++V + R+   LR+V+F
Sbjct: 454 RGYDAHLVIDGGISYRFNDGSEAVMEVRDEDTLRTVVF 491


>AC024838-7|AAF60820.1|  381|Caenorhabditis elegans Hypothetical
           protein Y59E9AL.2 protein.
          Length = 381

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 14/41 (34%), Positives = 18/41 (43%)
 Frame = +1

Query: 148 GATTFGMKYGWSGQIWAPNTEAGKLWMLXHKKLQKTNSGAG 270
           G    G +YGW     A N +AGK+W   H    K +   G
Sbjct: 285 GPHVVGYEYGWIPFPEAANFDAGKIWKPVHVNNHKGDISVG 325


>AC024838-3|AAF60821.1|  381|Caenorhabditis elegans Hypothetical
           protein Y59E9AL.3 protein.
          Length = 381

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 14/41 (34%), Positives = 18/41 (43%)
 Frame = +1

Query: 148 GATTFGMKYGWSGQIWAPNTEAGKLWMLXHKKLQKTNSGAG 270
           G    G +YGW     A N +AGK+W   H    K +   G
Sbjct: 285 GPHVVGYEYGWIPFPEAANFDAGKIWKPVHVNNHKGDISVG 325


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,402,785
Number of Sequences: 27780
Number of extensions: 326038
Number of successful extensions: 846
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 829
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 846
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)