Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1022
         (700 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g52087.1 68414.m05877 hypothetical protein                          32   0.42 
At1g35110.1 68414.m04352 Ulp1 protease family protein similar to...    31   0.56 
At1g44880.1 68414.m05142 Ulp1 protease family protein similar to...    30   1.7  
At2g01100.3 68415.m00018 expressed protein                             29   3.9  
At2g01100.2 68415.m00017 expressed protein                             29   3.9  
At2g01100.1 68415.m00016 expressed protein                             29   3.9  
At2g10350.1 68415.m01087 Ulp1 protease family protein similar to...    28   5.2  
At4g03970.1 68417.m00561 Ulp1 protease family protein contains P...    28   6.8  
At5g22860.2 68418.m02673 serine carboxypeptidase S28 family prot...    27   9.0  
At5g22860.1 68418.m02672 serine carboxypeptidase S28 family prot...    27   9.0  
At3g42530.1 68416.m04410 Ulp1 protease family similar to At5g281...    27   9.0  

>At1g52087.1 68414.m05877 hypothetical protein
          Length = 671

 Score = 31.9 bits (69), Expect = 0.42
 Identities = 15/57 (26%), Positives = 29/57 (50%)
 Frame = +3

Query: 291 LDGELQRPYDATYVFAQVNADKILWKYSGEIQPLKLMERDTTVYRAEYFNQSDWKNG 461
           L+  L+RP D   +   +N D+   +++ E++  K+   +  +  A  F +SDW  G
Sbjct: 210 LESNLKRPVDPL-IGEDINVDQSWAEWNDEVKDRKVSYMNGLILTAHQFKKSDWPGG 265


>At1g35110.1 68414.m04352 Ulp1 protease family protein similar to
           At5g28170, At1g44880, At3g42530, At4g19320, At5g36020,
           At4g03970, At3g43010, At2g10350 ; contains Pfam profile
           PF02902: Ulp1 protease family, C-terminal catalytic
           domain
          Length = 1311

 Score = 31.5 bits (68), Expect = 0.56
 Identities = 15/57 (26%), Positives = 28/57 (49%)
 Frame = +3

Query: 291 LDGELQRPYDATYVFAQVNADKILWKYSGEIQPLKLMERDTTVYRAEYFNQSDWKNG 461
           L+  L+RP D   +   +N D+   ++  E++  K+   +  +  A  F +SDW  G
Sbjct: 441 LESNLKRPVDPL-IGEDINVDQSWAEWDDEVKDRKVSYMNGLILTAHQFKKSDWPGG 496


>At1g44880.1 68414.m05142 Ulp1 protease family protein similar to
           At5g28170, At1g35110, At3g42530, At4g19320, At5g36020,
           At4g03970, At3g43010, At2g10350; contains Pfam profile
           PF02902: Ulp1 protease family, C-terminal catalytic
           domain
          Length = 1038

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 14/57 (24%), Positives = 28/57 (49%)
 Frame = +3

Query: 291 LDGELQRPYDATYVFAQVNADKILWKYSGEIQPLKLMERDTTVYRAEYFNQSDWKNG 461
           L+  L+ P D   V   +NAD+   ++  E++  K+      ++ +  F ++DW  G
Sbjct: 314 LESNLKLPVDPLIV-GDLNADQSWAEWDDEVKDKKVAHMYNLIWSSHQFQKTDWPGG 369


>At2g01100.3 68415.m00018 expressed protein
          Length = 247

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
 Frame = +3

Query: 462 KRG-YHRHIQIPGTNARRENDNGKSVAQXREHLRSVLFE 575
           +RG YHRH +   +++  E D+GKS+ + R+H R  L E
Sbjct: 181 RRGKYHRHNRGSASSSGSEEDSGKSM-KRRQHKRHRLAE 218


>At2g01100.2 68415.m00017 expressed protein
          Length = 247

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
 Frame = +3

Query: 462 KRG-YHRHIQIPGTNARRENDNGKSVAQXREHLRSVLFE 575
           +RG YHRH +   +++  E D+GKS+ + R+H R  L E
Sbjct: 181 RRGKYHRHNRGSASSSGSEEDSGKSM-KRRQHKRHRLAE 218


>At2g01100.1 68415.m00016 expressed protein
          Length = 247

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
 Frame = +3

Query: 462 KRG-YHRHIQIPGTNARRENDNGKSVAQXREHLRSVLFE 575
           +RG YHRH +   +++  E D+GKS+ + R+H R  L E
Sbjct: 181 RRGKYHRHNRGSASSSGSEEDSGKSM-KRRQHKRHRLAE 218


>At2g10350.1 68415.m01087 Ulp1 protease family protein similar to
           At5g28170, At1g35110, At1g44880, At3g42530, At4g19320,
           At5g36020, At4g03970, At3g43010 ; contains Pfam profile
           PF02902: Ulp1 protease family, C-terminal catalytic
           domain
          Length = 1110

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 14/57 (24%), Positives = 28/57 (49%)
 Frame = +3

Query: 291 LDGELQRPYDATYVFAQVNADKILWKYSGEIQPLKLMERDTTVYRAEYFNQSDWKNG 461
           L+  L+ P D   V   +NAD+   ++  E++  K+      ++ +  F ++DW  G
Sbjct: 295 LESNLKLPMDPLIV-GDLNADQSWAEWDDEVKDKKVAYMYDLIWASHRFQKTDWPGG 350


>At4g03970.1 68417.m00561 Ulp1 protease family protein contains Pfam
           profile PF02902: Ulp1 protease family, C-terminal
           catalytic domain; similar to  At5g28170, At1g35110,
           At1g44880, At3g42530, At4g19320, At5g36020, At3g43010,
           At2g10350
          Length = 1043

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 14/57 (24%), Positives = 28/57 (49%)
 Frame = +3

Query: 291 LDGELQRPYDATYVFAQVNADKILWKYSGEIQPLKLMERDTTVYRAEYFNQSDWKNG 461
           L+  L+ P D   V   +NAD+   ++  E++  K+      ++ +  F ++DW  G
Sbjct: 256 LESNLKLPVDPLIV-GDLNADQSWAEWDDEVKDKKVAYMYDLIWVSHQFQKTDWPGG 311


>At5g22860.2 68418.m02673 serine carboxypeptidase S28 family protein
           contains Pfam profile: PF05577 serine carboxypeptidase
           S28
          Length = 439

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
 Frame = +3

Query: 315 YDATYVFAQVNADKILWKY---SGEIQPLKLMERDTTVYRAEYFNQSDWKNGKRGYH 476
           YD T +FAQ   + I W++   S  + P+   ++DT ++    FN + + +G + YH
Sbjct: 342 YD-TKMFAQPTNNNIAWRWQSCSEIVMPVGYDKQDT-MFPTAPFNMTSYIDGCKSYH 396


>At5g22860.1 68418.m02672 serine carboxypeptidase S28 family protein
           contains Pfam profile: PF05577 serine carboxypeptidase
           S28
          Length = 502

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
 Frame = +3

Query: 315 YDATYVFAQVNADKILWKY---SGEIQPLKLMERDTTVYRAEYFNQSDWKNGKRGYH 476
           YD T +FAQ   + I W++   S  + P+   ++DT ++    FN + + +G + YH
Sbjct: 342 YD-TKMFAQPTNNNIAWRWQSCSEIVMPVGYDKQDT-MFPTAPFNMTSYIDGCKSYH 396


>At3g42530.1 68416.m04410 Ulp1 protease family similar to At5g28170,
           At1g35110, At1g44880, At4g19320, At5g36020, At4g03970,
           At3g43010, At2g10350; contains Pfam profile PF02902:
           Ulp1 protease family, C-terminal catalytic domain
          Length = 889

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 14/57 (24%), Positives = 27/57 (47%)
 Frame = +3

Query: 291 LDGELQRPYDATYVFAQVNADKILWKYSGEIQPLKLMERDTTVYRAEYFNQSDWKNG 461
           L+  L+ P D   V   +NAD+   ++  E++  K+      +  +  F ++DW  G
Sbjct: 277 LESNLKLPVDPLIV-GDLNADQSWAEWDDEVKDKKVAYMYDLILASHQFQKTDWPRG 332


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,698,718
Number of Sequences: 28952
Number of extensions: 312961
Number of successful extensions: 893
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 880
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 893
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1496852856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)