Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1021
         (500 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    23   1.5  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   6.2  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   8.2  

>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = +1

Query: 310 YCIFVTREIIYEIRKSLFDLANVFDSVIIFSYVFI 414
           YC       I ++   L D  +V  S+ +FS+ F+
Sbjct: 188 YCFRNDNSEILKMATQLVDFKSVIRSISVFSFFFM 222


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 14/59 (23%), Positives = 30/59 (50%)
 Frame = +1

Query: 280 FVLISFHSLVYCIFVTREIIYEIRKSLFDLANVFDSVIIFSYVFIMLGRLKCVFVYIIV 456
           F+ +   ++V+ +F  R + Y+       +AN F  +   + +F++L +   VF  +IV
Sbjct: 84  FIALIVVNIVH-VFRKRRVNYKDSNIGLVVANAFFLLWTPAVIFVVLSKNGIVFAGLIV 141


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = +1

Query: 457 TYKVVINNQT 486
           TYK+ +NNQ+
Sbjct: 483 TYKITVNNQS 492


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,086
Number of Sequences: 336
Number of extensions: 2615
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11839801
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)