Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1021
         (500 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ320497-1|CAC60121.1| 4523|Homo sapiens axonemal beta heavy cha...    33   0.42 
AC005078-1|AAC78616.2| 1020|Homo sapiens Homo sapiens dynein, ax...    33   0.42 

>AJ320497-1|CAC60121.1| 4523|Homo sapiens axonemal beta heavy chain
            dynein type 11 protein.
          Length = 4523

 Score = 33.5 bits (73), Expect = 0.42
 Identities = 16/50 (32%), Positives = 27/50 (54%)
 Frame = +1

Query: 253  VLLTGP*MCFVLISFHSLVYCIFVTREIIYEIRKSLFDLANVFDSVIIFS 402
            +L +GP +    I+FH  + C F+   I +    +L DL+NVF  ++  S
Sbjct: 2682 ILRSGPTLIQATIAFHQTMMCNFLPTAIKFHYIFNLRDLSNVFQGILFAS 2731


>AC005078-1|AAC78616.2| 1020|Homo sapiens Homo sapiens dynein,
           axonemal, heavy polypeptide 11 (DNAH11) protein.
          Length = 1020

 Score = 33.5 bits (73), Expect = 0.42
 Identities = 16/50 (32%), Positives = 27/50 (54%)
 Frame = +1

Query: 253 VLLTGP*MCFVLISFHSLVYCIFVTREIIYEIRKSLFDLANVFDSVIIFS 402
           +L +GP +    I+FH  + C F+   I +    +L DL+NVF  ++  S
Sbjct: 661 ILRSGPTLIQATIAFHQTMMCNFLPTAIKFHYIFNLRDLSNVFQGILFAS 710


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,685,446
Number of Sequences: 237096
Number of extensions: 1158474
Number of successful extensions: 1524
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1466
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1521
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4593178062
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)