Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1021
         (500 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate isome...    23   1.8  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          23   2.4  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      23   2.4  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    23   2.4  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    23   2.4  
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    22   3.1  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   7.2  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   7.2  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    21   9.5  

>EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate
           isomerase protein.
          Length = 247

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = -1

Query: 305 SE*NDIRTKHIHGPVNSTIKNYALLRSIRIYYTRIILP 192
           SE NDI      GP++S ++    + SI + Y + ILP
Sbjct: 18  SEINDIVGFLKKGPLDSNVEVVVGVPSIYLTYAKNILP 55


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 8/19 (42%), Positives = 15/19 (78%)
 Frame = -2

Query: 163 NIITGIINNFSYLLNTLYS 107
           +++TG+ N  +Y++NT YS
Sbjct: 189 SVVTGMNNIETYIVNTNYS 207


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 8/19 (42%), Positives = 15/19 (78%)
 Frame = -2

Query: 163 NIITGIINNFSYLLNTLYS 107
           +++TG+ N  +Y++NT YS
Sbjct: 189 SVVTGMNNIETYIVNTNYS 207


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 10/25 (40%), Positives = 18/25 (72%), Gaps = 2/25 (8%)
 Frame = -1

Query: 89  TSVLIE--RVKGTHFVKI*SYELVP 21
           +S+++E   ++GTH+VKI  Y  +P
Sbjct: 280 SSIIMELHNIEGTHYVKIVYYLGIP 304


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 10/25 (40%), Positives = 18/25 (72%), Gaps = 2/25 (8%)
 Frame = -1

Query: 89  TSVLIE--RVKGTHFVKI*SYELVP 21
           +S+++E   ++GTH+VKI  Y  +P
Sbjct: 295 SSIIMELHNIEGTHYVKIVYYLGIP 319


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -1

Query: 212 YTRIILPLRTDNDTIL 165
           Y R+I P+  +NDT++
Sbjct: 32  YNRLIRPVSNNNDTVV 47


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 9/31 (29%), Positives = 12/31 (38%)
 Frame = +2

Query: 152 GDNVVILYRYQFVRVILYECNIYGWIVVVHN 244
           GD   +   Y  +   L   N  GW +  HN
Sbjct: 183 GDTADMKKTYNNIDYYLLAANYTGWYLTKHN 213


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 9/31 (29%), Positives = 12/31 (38%)
 Frame = +2

Query: 152 GDNVVILYRYQFVRVILYECNIYGWIVVVHN 244
           GD   +   Y  +   L   N  GW +  HN
Sbjct: 183 GDTADMKKTYNNIDYYLLAANYTGWYLTKHN 213


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -1

Query: 326 VTKIQYTSE*NDIRTKHIHGPVNSTIKN 243
           + K+ Y  + ND+  + +   VN  IKN
Sbjct: 383 IQKVIYGFDFNDVNFRILIANVNDLIKN 410


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,423
Number of Sequences: 438
Number of extensions: 3070
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13741392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)