Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1019
         (550 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   5.4  
EF222288-1|ABN79648.1|   73|Tribolium castaneum adipokinetic hor...    21   9.4  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   9.4  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = +1

Query: 19  AXTAPGNSFLQRHS 60
           A  APGNS   RHS
Sbjct: 347 ANAAPGNSASNRHS 360


>EF222288-1|ABN79648.1|   73|Tribolium castaneum adipokinetic
           hormone 1 protein.
          Length = 73

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +2

Query: 356 VIVAFIGTCAIQ 391
           V++AF+G C  Q
Sbjct: 9   VLIAFVGVCTAQ 20


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = -3

Query: 341 TVSWNCRNXAMKS 303
           T+ WNC+N  + S
Sbjct: 286 TILWNCQNTRVAS 298


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,223
Number of Sequences: 336
Number of extensions: 2008
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13516233
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)