Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1019
(550 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPB2B4.04c ||pmc1, pmc1|P-type ATPase, calcium transporting Pm... 75 5e-15
SPBC839.06 |cta3||P-type ATPase, calcium transporting Cta3|Schiz... 58 9e-10
SPBC31E1.02c |pmr1||P-type ATPase, calcium transporting Pmr1 |Sc... 54 1e-08
SPAC5D6.06c |||UDP-GlcNAc transferase associated protein Alg14|S... 31 0.085
SPAC1071.10c |pma1||P-type proton ATPase Pma1 |Schizosaccharomyc... 31 0.11
SPAC23D3.13c |||guanyl-nucleotide exchange factor|Schizosaccharo... 27 1.4
SPBC21H7.06c |||inositol metabolism protein Opi10 |Schizosacchar... 27 1.4
SPBC21.06c |cdc7|pld1, its10|serine/threonine protein kinase Cdc... 27 1.8
SPAC29A4.20 |||RNA polymerase II elongator complex, histone acet... 26 4.2
SPAC25B8.13c |isp7||2-OG-Fe|Schizosaccharomyces pombe|chr 1|||Ma... 25 5.6
SPBC428.14 |||1-acylglycerol-3-phosphate acyltransferase |Schizo... 25 7.3
SPBC14C8.07c |cdc18||MCM loader|Schizosaccharomyces pombe|chr 2|... 25 9.7
SPAC23G3.10c |ssr3||SWI/SNF and RSC complex subunit Ssr3|Schizos... 25 9.7
>SPAPB2B4.04c ||pmc1, pmc1|P-type ATPase, calcium transporting Pmc1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1292
Score = 75.4 bits (177), Expect = 5e-15
Identities = 34/48 (70%), Positives = 40/48 (83%)
Frame = +1
Query: 205 NSTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDFIAXFLQFQLTVNV 348
+ T+VAKEASDIIL DDNFSSIVKA+ WGR V D + FLQFQ+TVN+
Sbjct: 901 SGTEVAKEASDIILMDDNFSSIVKAIAWGRTVNDAVKKFLQFQITVNI 948
Score = 44.8 bits (101), Expect = 8e-06
Identities = 21/35 (60%), Positives = 29/35 (82%)
Frame = +3
Query: 390 RTAPLKAXQMLXVNLIMDTLASLALATEMPPPDLL 494
+++ L A Q+L VNLIMDTLA+LALAT+ P P++L
Sbjct: 964 QSSVLTAVQLLWVNLIMDTLAALALATDPPTPEVL 998
>SPBC839.06 |cta3||P-type ATPase, calcium transporting
Cta3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1037
Score = 58.0 bits (134), Expect = 9e-10
Identities = 28/48 (58%), Positives = 35/48 (72%)
Frame = +1
Query: 205 NSTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDFIAXFLQFQLTVNV 348
N +DVAK+ASDI+LTDDNFSSIV A+ GR ++D I F+ L NV
Sbjct: 723 NGSDVAKDASDIVLTDDNFSSIVNAIEEGRRMFDNIMRFVLHLLVSNV 770
Score = 25.4 bits (53), Expect = 5.6
Identities = 9/32 (28%), Positives = 18/32 (56%)
Frame = +3
Query: 399 PLKAXQMLXVNLIMDTLASLALATEMPPPDLL 494
P+ ++L N+I + S+ L E+ PD++
Sbjct: 792 PMSPVEILWCNMITSSFPSMGLGMELAQPDVM 823
>SPBC31E1.02c |pmr1||P-type ATPase, calcium transporting Pmr1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 899
Score = 54.4 bits (125), Expect = 1e-08
Identities = 24/46 (52%), Positives = 37/46 (80%)
Frame = +1
Query: 211 TDVAKEASDIILTDDNFSSIVKAVMWGRNVYDFIAXFLQFQLTVNV 348
TDVAKEA+D+ILTDD+F++I+ AV G+ +++ I F+ FQL+ +V
Sbjct: 649 TDVAKEAADMILTDDSFATILSAVEEGKGIFNNIKNFITFQLSTSV 694
>SPAC5D6.06c |||UDP-GlcNAc transferase associated protein
Alg14|Schizosaccharomyces pombe|chr 1|||Manual
Length = 210
Score = 31.5 bits (68), Expect = 0.085
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -3
Query: 221 ATSVLLSTFVYYVGSNT*RSTRRKPVSLHIRRFIGSFDFVG 99
A +VL S + VG N +S+++KP H+ F GS G
Sbjct: 8 AIAVLASLIILLVGRNAIKSSKKKPFQKHLLVFFGSGGHTG 48
>SPAC1071.10c |pma1||P-type proton ATPase Pma1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 919
Score = 31.1 bits (67), Expect = 0.11
Identities = 11/50 (22%), Positives = 30/50 (60%)
Frame = +1
Query: 199 VDNSTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDFIAXFLQFQLTVNV 348
V+ +TD A+ A+DI+ S+I+ A+ R ++ + ++ +++ +++
Sbjct: 649 VEGATDAARSAADIVFLAPGLSAIIDALKTSRQIFHRMYSYVVYRIALSL 698
>SPAC23D3.13c |||guanyl-nucleotide exchange
factor|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1616
Score = 27.5 bits (58), Expect = 1.4
Identities = 10/34 (29%), Positives = 22/34 (64%)
Frame = -2
Query: 150 ARLAPYKAFYRKFRFCRSLSLGRHVNLNVCAVPL 49
++L +AFY+ F FC + + RH+ +++ ++ L
Sbjct: 49 SKLKGNEAFYKPFLFCCAKKIERHIYISLNSIQL 82
>SPBC21H7.06c |||inositol metabolism protein Opi10
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 200
Score = 27.5 bits (58), Expect = 1.4
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +1
Query: 148 GLRRVLRHVLEPT*YTNVDNSTDVAKEASDIILTD-DNFSSIVKAVMWGRNVYDFIAXFL 324
G+ +L +EP TN + V+ AS++I +S+ + ++ N+Y+F+A F
Sbjct: 95 GITAMLGISVEPL--TNFTETPAVSTSASNVIAKPLPPVTSVAQKIL--TNLYNFLASFA 150
Query: 325 QFQLTVNVVG 354
QL N +G
Sbjct: 151 TSQLPPNSIG 160
>SPBC21.06c |cdc7|pld1, its10|serine/threonine protein kinase
Cdc7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1062
Score = 27.1 bits (57), Expect = 1.8
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1
Query: 253 DNFSSIVKAVMWGRNVYDFIAXFLQFQL 336
D F S++ + W V+D IA +LQF+L
Sbjct: 878 DFFLSLLSDLNWQSAVFDTIASWLQFEL 905
>SPAC29A4.20 |||RNA polymerase II elongator complex, histone
acetyltransferase subunit |Schizosaccharomyces pombe|chr
1|||Manual
Length = 544
Score = 25.8 bits (54), Expect = 4.2
Identities = 18/68 (26%), Positives = 26/68 (38%), Gaps = 3/68 (4%)
Frame = -3
Query: 470 RGQRQGRQRVHDQVHPQHLXRLERGCPE---WRMFXXXXXXXPTTLTVSWNCRNXAMKSY 300
R + G Q VH ++HP+ + L R W F L R + K+Y
Sbjct: 399 RAREVGMQEVHHKIHPEQVELLRRDYTANGGWETFLSYEDPKQDILIGLLRLRQCSDKTY 458
Query: 299 TLRPHITA 276
RP T+
Sbjct: 459 --RPEFTS 464
>SPAC25B8.13c |isp7||2-OG-Fe|Schizosaccharomyces pombe|chr
1|||Manual
Length = 397
Score = 25.4 bits (53), Expect = 5.6
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Frame = +3
Query: 351 GPSSWPLSEHAPFRTAPLK-AXQML-XVNLIMDTLA-SLALATE 473
GP+ WP + + FR A +K QML N +M LA SL L+ +
Sbjct: 203 GPNKWPSTAGSSFRKALVKYHDQMLAFANHVMSLLAESLELSPD 246
>SPBC428.14 |||1-acylglycerol-3-phosphate acyltransferase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 350
Score = 25.0 bits (52), Expect = 7.3
Identities = 13/57 (22%), Positives = 24/57 (42%)
Frame = +1
Query: 220 AKEASDIILTDDNFSSIVKAVMWGRNVYDFIAXFLQFQLTVNVVGRHRGLYRNMRHS 390
AK+ + + N + + WG ++ FI ++ + RH RN+R S
Sbjct: 118 AKQHGHVYIMLKNSLKWLPVIGWGMQLFRFIFLSRKWDKDYETMSRHFKFIRNVRDS 174
>SPBC14C8.07c |cdc18||MCM loader|Schizosaccharomyces pombe|chr
2|||Manual
Length = 577
Score = 24.6 bits (51), Expect = 9.7
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +1
Query: 46 LQRHSTDIKVNVPSE*KRPTKSKLP 120
LQ TD+ N P++ K K KLP
Sbjct: 72 LQEEKTDLYPNFPAQLKENKKPKLP 96
>SPAC23G3.10c |ssr3||SWI/SNF and RSC complex subunit
Ssr3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 425
Score = 24.6 bits (51), Expect = 9.7
Identities = 7/24 (29%), Positives = 16/24 (66%)
Frame = +1
Query: 250 DDNFSSIVKAVMWGRNVYDFIAXF 321
DD + +++A+ + ++ YDF+ F
Sbjct: 332 DDKLTELIQAITYSQSKYDFMKKF 355
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,971,318
Number of Sequences: 5004
Number of extensions: 33101
Number of successful extensions: 89
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 85
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 89
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 227943826
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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