Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1014
         (490 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF164153-1|AAD47077.1|  131|Anopheles gambiae ribosomal protein ...   200   2e-53
AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.     24   2.4  
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    24   2.4  
AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           23   4.2  

>AF164153-1|AAD47077.1|  131|Anopheles gambiae ribosomal protein S17
           protein.
          Length = 131

 Score =  200 bits (489), Expect = 2e-53
 Identities = 97/116 (83%), Positives = 106/116 (91%)
 Frame = +3

Query: 33  KPSXKAAKIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQV 212
           K   KA+K+IIEKYYTRLT+DFDTNKRI EE+AIIPTKPLRNKIAGF THLM+RLRHSQV
Sbjct: 7   KTIKKASKVIIEKYYTRLTMDFDTNKRIVEEVAIIPTKPLRNKIAGFVTHLMKRLRHSQV 66

Query: 213 RGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 380
           RGISIKLQEEERERRDNYVP+VSALE DIIEVDP+TK+MLK LDFNNI  +QLT P
Sbjct: 67  RGISIKLQEEERERRDNYVPDVSALEQDIIEVDPETKEMLKHLDFNNI-VVQLTNP 121



 Score = 25.0 bits (52), Expect = 1.4
 Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 4/30 (13%)
 Frame = +2

Query: 14 MGRVRTKTVKXSG----EDYY*KILYKINT 91
          MGRVRTKT+K +     E YY ++    +T
Sbjct: 1  MGRVRTKTIKKASKVIIEKYYTRLTMDFDT 30


>AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.
          Length = 260

 Score = 24.2 bits (50), Expect = 2.4
 Identities = 13/47 (27%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
 Frame = +3

Query: 216 GISIKLQEEERERRDNYVPEVSALE-HDIIEVDPDTKDMLKMLDFNN 353
           G + +L+EEE + +  + PE+   E  + ++V  + K+M+ + D +N
Sbjct: 87  GTTCELEEEEVDLQAKHAPEMDGSELMEAVDVAAELKNMV-LQDISN 132


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 24.2 bits (50), Expect = 2.4
 Identities = 11/36 (30%), Positives = 21/36 (58%)
 Frame = +1

Query: 193 VSDTRKCEESLSNFRKRSVRGVTTMSQKCLLSNMTS 300
           +++TR C E++S F+    R   T+ +K  + + TS
Sbjct: 356 INETRVCGENISTFQLEERRRRRTVIEKLNIEDGTS 391


>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 23.4 bits (48), Expect = 4.2
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +3

Query: 294 DIIEVDPDTKDMLKMLDFNNINGL 365
           DI +VDPD    L  +  NNI G+
Sbjct: 636 DIEDVDPDLHRSLTWILENNITGI 659


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 398,380
Number of Sequences: 2352
Number of extensions: 6799
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 43131618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)