Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1013
         (550 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q2THV7 Cluster: Membrane-associated DHHC8 zinc finger p...    34   2.5  
UniRef50_A5E618 Cluster: Putative uncharacterized protein; n=1; ...    34   2.5  
UniRef50_UPI0000F2B129 Cluster: PREDICTED: similar to CEP152 pro...    33   5.8  
UniRef50_Q8IQ18 Cluster: CG33196-PB; n=10; Endopterygota|Rep: CG...    33   5.8  
UniRef50_Q2KFN1 Cluster: Putative uncharacterized protein; n=2; ...    33   5.8  

>UniRef50_Q2THV7 Cluster: Membrane-associated DHHC8 zinc finger
           protein; n=2; Euteleostomi|Rep: Membrane-associated
           DHHC8 zinc finger protein - Fugu rubripes (Japanese
           pufferfish) (Takifugu rubripes)
          Length = 797

 Score = 33.9 bits (74), Expect = 2.5
 Identities = 17/45 (37%), Positives = 26/45 (57%)
 Frame = +3

Query: 33  HLPAVHPADQRTRLWQPSPSPSVLSYPNSTISYTSLILLDVSEAT 167
           HLPA+ P    +  ++   SP+ LS  N ++SY SL+   +S AT
Sbjct: 477 HLPALQPPTVTSTPYKSVFSPNTLSNRNGSLSYDSLLHPSISSAT 521


>UniRef50_A5E618 Cluster: Putative uncharacterized protein; n=1;
            Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
            uncharacterized protein - Lodderomyces elongisporus
            (Yeast) (Saccharomyces elongisporus)
          Length = 1911

 Score = 33.9 bits (74), Expect = 2.5
 Identities = 18/43 (41%), Positives = 26/43 (60%)
 Frame = +3

Query: 12   QSSQSQPHLPAVHPADQRTRLWQPSPSPSVLSYPNSTISYTSL 140
            Q S S P++  +H   Q + L Q SP+ S  SYPN +I+ T+L
Sbjct: 1702 QRSSSSPYVQTLHK--QSSLLSQHSPTASTFSYPNPSIAGTAL 1742


>UniRef50_UPI0000F2B129 Cluster: PREDICTED: similar to CEP152 protein;
            n=1; Monodelphis domestica|Rep: PREDICTED: similar to
            CEP152 protein - Monodelphis domestica
          Length = 1722

 Score = 32.7 bits (71), Expect = 5.8
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = +3

Query: 6    CQQSSQSQPHLPAVHPADQRTRLWQPSPSPSVLSYPNSTI 125
            C+Q      H+PAV   D+RT+  Q + SP   S+ NS +
Sbjct: 1638 CRQFQCQNDHIPAVKKEDKRTQTEQVNKSPGHASHHNSDV 1677


>UniRef50_Q8IQ18 Cluster: CG33196-PB; n=10; Endopterygota|Rep:
             CG33196-PB - Drosophila melanogaster (Fruit fly)
          Length = 23015

 Score = 32.7 bits (71), Expect = 5.8
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +2

Query: 23    KPTSPARGAPCRPTNEALATFPFPFCSLLPKF 118
             +P +P + +PC P +E   +   P CS LP+F
Sbjct: 14001 RPQNPCQPSPCGPNSECRVSGDSPSCSCLPEF 14032


>UniRef50_Q2KFN1 Cluster: Putative uncharacterized protein; n=2;
           Magnaporthe grisea|Rep: Putative uncharacterized protein
           - Magnaporthe grisea 70-15
          Length = 536

 Score = 32.7 bits (71), Expect = 5.8
 Identities = 18/57 (31%), Positives = 29/57 (50%)
 Frame = +2

Query: 272 HNHQIMTVYAHIGKI*GPGSVLSTKVKMLILRILPI*KFIGAVNSWSEAVCSISTIQ 442
           H+H++ +V    GK+ G G   + KV +++       K I +  SW EA  S+ T Q
Sbjct: 92  HDHRMQSVSRSWGKLVGKGPGDNAKVSLMLNDFEDADKLIDSAKSWREAWISLVTSQ 148


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 497,092,907
Number of Sequences: 1657284
Number of extensions: 8905494
Number of successful extensions: 24473
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 23409
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24435
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 35822246242
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)