Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1013
         (550 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P...    33   0.34 
BT023840-1|AAZ86761.1| 1078|Drosophila melanogaster LD10265p pro...    28   7.2  
BT001668-1|AAN71423.1|  962|Drosophila melanogaster RE49559p pro...    28   7.2  
AF222864-1|AAF34689.1| 1078|Drosophila melanogaster Dspt5 protein.     28   7.2  
AE013599-2886|AAS64808.1|  962|Drosophila melanogaster CG7626-PB...    28   7.2  
AE013599-2885|AAF57561.1| 1078|Drosophila melanogaster CG7626-PA...    28   7.2  

>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
             protein.
          Length = 23015

 Score = 32.7 bits (71), Expect = 0.34
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +2

Query: 23    KPTSPARGAPCRPTNEALATFPFPFCSLLPKF 118
             +P +P + +PC P +E   +   P CS LP+F
Sbjct: 14001 RPQNPCQPSPCGPNSECRVSGDSPSCSCLPEF 14032



 Score = 29.1 bits (62), Expect = 4.1
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = +2

Query: 5     LPTI*PKPTSPARGAPCRPTNEALATFPFPFCSLLPKFN 121
             +P +     +P + +PC P +E  AT     CS LP+++
Sbjct: 19943 IPPVERDEVNPCQPSPCGPNSECQATSGGARCSCLPQYH 19981



 Score = 28.3 bits (60), Expect = 7.2
 Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
 Frame = +2

Query: 5     LPTI*PK--PTSPARGAPCRPTNEALATFPFPFCSLLPKF 118
             LP I P+  P +P +  PC P ++  A      C  LP F
Sbjct: 19834 LPAIVPQRAPINPCQPTPCGPNSQCRAYHEQAICYCLPNF 19873


>BT023840-1|AAZ86761.1| 1078|Drosophila melanogaster LD10265p protein.
          Length = 1078

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +3

Query: 3    GCQQSSQSQPHLPA-VHPADQRTRLWQPSPSPSVLSYP 113
            G Q +SQ  P  P  ++ +D+    + PSPSP+   YP
Sbjct: 894  GYQMTSQFAPQTPGTLYGSDRSYSPFNPSPSPAPSPYP 931


>BT001668-1|AAN71423.1|  962|Drosophila melanogaster RE49559p
           protein.
          Length = 962

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +3

Query: 3   GCQQSSQSQPHLPA-VHPADQRTRLWQPSPSPSVLSYP 113
           G Q +SQ  P  P  ++ +D+    + PSPSP+   YP
Sbjct: 778 GYQMTSQFAPQTPGTLYGSDRSYSPFNPSPSPAPSPYP 815


>AF222864-1|AAF34689.1| 1078|Drosophila melanogaster Dspt5 protein.
          Length = 1078

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +3

Query: 3    GCQQSSQSQPHLPA-VHPADQRTRLWQPSPSPSVLSYP 113
            G Q +SQ  P  P  ++ +D+    + PSPSP+   YP
Sbjct: 894  GYQMTSQFAPQTPGTLYGSDRSYSPFNPSPSPAPSPYP 931


>AE013599-2886|AAS64808.1|  962|Drosophila melanogaster CG7626-PB,
           isoform B protein.
          Length = 962

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +3

Query: 3   GCQQSSQSQPHLPA-VHPADQRTRLWQPSPSPSVLSYP 113
           G Q +SQ  P  P  ++ +D+    + PSPSP+   YP
Sbjct: 778 GYQMTSQFAPQTPGTLYGSDRSYSPFNPSPSPAPSPYP 815


>AE013599-2885|AAF57561.1| 1078|Drosophila melanogaster CG7626-PA,
            isoform A protein.
          Length = 1078

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +3

Query: 3    GCQQSSQSQPHLPA-VHPADQRTRLWQPSPSPSVLSYP 113
            G Q +SQ  P  P  ++ +D+    + PSPSP+   YP
Sbjct: 894  GYQMTSQFAPQTPGTLYGSDRSYSPFNPSPSPAPSPYP 931


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,436,528
Number of Sequences: 53049
Number of extensions: 419957
Number of successful extensions: 1264
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1264
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2089831299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)