Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1010
         (700 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023035-1|AAY55451.1|  345|Drosophila melanogaster IP11040p pro...    60   4e-09
AE014297-1419|AAF54729.1|  345|Drosophila melanogaster CG18547-P...    60   4e-09
AY118797-1|AAM50657.1|  342|Drosophila melanogaster GH17980p pro...    56   5e-08
AE014297-1421|AAF54731.1|  342|Drosophila melanogaster CG3397-PA...    56   5e-08
AE014297-1420|AAF54730.1|  294|Drosophila melanogaster CG12224-P...    47   2e-05

>BT023035-1|AAY55451.1|  345|Drosophila melanogaster IP11040p
           protein.
          Length = 345

 Score = 59.7 bits (138), Expect = 4e-09
 Identities = 25/47 (53%), Positives = 35/47 (74%)
 Frame = +3

Query: 129 KEAWXSLKESLNLGIXYLETGPWYGQGSSEKVIGKALFGVPRDSYYI 269
           +E   ++ E++  GI Y++T PWYGQG SE+V+G AL  VPR+SYYI
Sbjct: 53  EEGIKTVHEAVKSGINYIDTAPWYGQGRSEEVLGLALKDVPRESYYI 99



 Score = 48.8 bits (111), Expect = 7e-06
 Identities = 21/53 (39%), Positives = 34/53 (64%)
 Frame = +2

Query: 419 RTLRYVLKETLPXXEQAXRDGKARFIGIADYDIDLMXEXVXESXVXISTILSY 577
           + L  V+ ETLP  EQ  ++GKARFIG++ Y I ++ E +  +   + T+L+Y
Sbjct: 149 KDLDIVINETLPTLEQLVKEGKARFIGVSAYPISVLKEFLTRTAGRLDTVLTY 201



 Score = 48.4 bits (110), Expect = 9e-06
 Identities = 24/53 (45%), Positives = 29/53 (54%)
 Frame = +1

Query: 274 SKVXRYDXDTLKMXDFSAXKTAXXXXXXXXXXXXXYVDLIQVHDITFAPDTSV 432
           +KV RY+ D  KM DFSA KT              YVD+IQ+HDI FA D  +
Sbjct: 101 TKVARYELDYDKMFDFSAKKTRESVEKSLKLLGLDYVDVIQIHDIEFAKDLDI 153


>AE014297-1419|AAF54729.1|  345|Drosophila melanogaster CG18547-PA
           protein.
          Length = 345

 Score = 59.7 bits (138), Expect = 4e-09
 Identities = 25/47 (53%), Positives = 35/47 (74%)
 Frame = +3

Query: 129 KEAWXSLKESLNLGIXYLETGPWYGQGSSEKVIGKALFGVPRDSYYI 269
           +E   ++ E++  GI Y++T PWYGQG SE+V+G AL  VPR+SYYI
Sbjct: 53  EEGIKTVHEAVKSGINYIDTAPWYGQGRSEEVLGLALKDVPRESYYI 99



 Score = 48.8 bits (111), Expect = 7e-06
 Identities = 21/53 (39%), Positives = 34/53 (64%)
 Frame = +2

Query: 419 RTLRYVLKETLPXXEQAXRDGKARFIGIADYDIDLMXEXVXESXVXISTILSY 577
           + L  V+ ETLP  EQ  ++GKARFIG++ Y I ++ E +  +   + T+L+Y
Sbjct: 149 KDLDIVINETLPTLEQLVKEGKARFIGVSAYPISVLKEFLTRTAGRLDTVLTY 201



 Score = 48.4 bits (110), Expect = 9e-06
 Identities = 24/53 (45%), Positives = 29/53 (54%)
 Frame = +1

Query: 274 SKVXRYDXDTLKMXDFSAXKTAXXXXXXXXXXXXXYVDLIQVHDITFAPDTSV 432
           +KV RY+ D  KM DFSA KT              YVD+IQ+HDI FA D  +
Sbjct: 101 TKVARYELDYDKMFDFSAKKTRESVEKSLKLLGLDYVDVIQIHDIEFAKDLDI 153


>AY118797-1|AAM50657.1|  342|Drosophila melanogaster GH17980p
           protein.
          Length = 342

 Score = 56.0 bits (129), Expect = 5e-08
 Identities = 22/47 (46%), Positives = 37/47 (78%)
 Frame = +3

Query: 129 KEAWXSLKESLNLGIXYLETGPWYGQGSSEKVIGKALFGVPRDSYYI 269
           +E   +++E++  GI Y++T P+YGQG SE+++G+AL  VPR++YYI
Sbjct: 55  EEGILTVQEAIRSGINYIDTAPFYGQGKSEELLGQALKDVPREAYYI 101



 Score = 47.6 bits (108), Expect = 2e-05
 Identities = 21/52 (40%), Positives = 31/52 (59%)
 Frame = +2

Query: 422 TLRYVLKETLPXXEQAXRDGKARFIGIADYDIDLMXEXVXESXVXISTILSY 577
           +L  VL ET+P  E+  + GKARFIG+  YD+D++ E        I  +L+Y
Sbjct: 152 SLDMVLNETIPVLEEYVQAGKARFIGVTAYDVDVLKECAERGKGRIQVVLNY 203


>AE014297-1421|AAF54731.1|  342|Drosophila melanogaster CG3397-PA
           protein.
          Length = 342

 Score = 56.0 bits (129), Expect = 5e-08
 Identities = 22/47 (46%), Positives = 37/47 (78%)
 Frame = +3

Query: 129 KEAWXSLKESLNLGIXYLETGPWYGQGSSEKVIGKALFGVPRDSYYI 269
           +E   +++E++  GI Y++T P+YGQG SE+++G+AL  VPR++YYI
Sbjct: 55  EEGILTVQEAIRSGINYIDTAPFYGQGKSEELLGQALKDVPREAYYI 101



 Score = 47.6 bits (108), Expect = 2e-05
 Identities = 21/52 (40%), Positives = 31/52 (59%)
 Frame = +2

Query: 422 TLRYVLKETLPXXEQAXRDGKARFIGIADYDIDLMXEXVXESXVXISTILSY 577
           +L  VL ET+P  E+  + GKARFIG+  YD+D++ E        I  +L+Y
Sbjct: 152 SLDMVLNETIPVLEEYVQAGKARFIGVTAYDVDVLKECAERGKGRIQVVLNY 203


>AE014297-1420|AAF54730.1|  294|Drosophila melanogaster CG12224-PA
           protein.
          Length = 294

 Score = 47.2 bits (107), Expect = 2e-05
 Identities = 21/51 (41%), Positives = 30/51 (58%)
 Frame = +2

Query: 425 LRYVLKETLPXXEQAXRDGKARFIGIADYDIDLMXEXVXESXVXISTILSY 577
           L  VL ET+P  E+  + GKARFIG+  YD+D++ E        I  +L+Y
Sbjct: 124 LDIVLNETIPVLEEYVQAGKARFIGVTAYDVDVLKECAERGKGRIQVVLNY 174



 Score = 37.1 bits (82), Expect = 0.023
 Identities = 18/53 (33%), Positives = 25/53 (47%)
 Frame = +1

Query: 274 SKVXRYDXDTLKMXDFSAXKTAXXXXXXXXXXXXXYVDLIQVHDITFAPDTSV 432
           +KV RY  D   M D+SA K                VD++QVHD+  AP+  +
Sbjct: 74  TKVARYGLDPKNMFDYSADKARESVKRSLERLQLDRVDILQVHDVDAAPNLDI 126


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,147,405
Number of Sequences: 53049
Number of extensions: 329335
Number of successful extensions: 409
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 385
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 409
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)