Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1009
(700 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q49AN0 Cluster: Cryptochrome-2; n=106; Eumetazoa|Rep: C... 266 3e-70
UniRef50_Q7ZYX5 Cluster: Cry4 protein; n=13; Euteleostomi|Rep: C... 237 2e-61
UniRef50_Q4T244 Cluster: Chromosome undetermined SCAF10345, whol... 236 3e-61
UniRef50_A7S6B3 Cluster: Predicted protein; n=3; Nematostella ve... 210 2e-53
UniRef50_Q52Z99 Cluster: 6-4 photolyase; n=4; Viridiplantae|Rep:... 203 4e-51
UniRef50_O48652 Cluster: 6-4 photolyase; n=3; Arabidopsis thalia... 200 2e-50
UniRef50_Q019Z4 Cluster: Cryptochrome-like protein 1; n=4; Ostre... 194 1e-48
UniRef50_A7P7Q6 Cluster: Chromosome chr9 scaffold_7, whole genom... 192 7e-48
UniRef50_Q4SAM2 Cluster: Chromosome undetermined SCAF14682, whol... 182 1e-44
UniRef50_Q4PCL9 Cluster: Putative uncharacterized protein; n=1; ... 168 1e-40
UniRef50_Q4T243 Cluster: Chromosome undetermined SCAF10345, whol... 167 2e-40
UniRef50_A2R6W6 Cluster: Cofactor: FAD; n=1; Aspergillus niger|R... 162 9e-39
UniRef50_A4QZX5 Cluster: Putative uncharacterized protein; n=1; ... 161 2e-38
UniRef50_A1CJL8 Cluster: DNA photolyase, putative; n=4; Pezizomy... 159 5e-38
UniRef50_O77059 Cluster: CG3772-PA; n=15; Coelomata|Rep: CG3772-... 145 1e-33
UniRef50_Q8N7D9 Cluster: CDNA FLJ25749 fis, clone TST06111, high... 134 2e-30
UniRef50_Q6HWS5 Cluster: Deoxyribodipyrimidine photolyase family... 126 5e-28
UniRef50_Q3E438 Cluster: DNA photolyase, FAD-binding:DNA photoly... 126 5e-28
UniRef50_Q04449 Cluster: Deoxyribodipyrimidine photo-lyase; n=13... 124 2e-27
UniRef50_A5UYV1 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;... 122 8e-27
UniRef50_Q6MDF3 Cluster: Putative photolyase; n=1; Candidatus Pr... 115 1e-24
UniRef50_Q21MT8 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 114 2e-24
UniRef50_A1KB68 Cluster: Deoxyribodipyrimidine photo-lyase; n=24... 114 2e-24
UniRef50_Q9KNA8 Cluster: Deoxyribodipyrimidine photo-lyase; n=25... 111 1e-23
UniRef50_Q83CE4 Cluster: Deoxyribodipyrimidine photolyase-class ... 111 2e-23
UniRef50_Q834P4 Cluster: Deoxyribodipyrimidine photolyase; n=14;... 109 5e-23
UniRef50_Q42696 Cluster: CPH1; n=4; Viridiplantae|Rep: CPH1 - Ch... 109 5e-23
UniRef50_Q5FS98 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 106 5e-22
UniRef50_Q43125 Cluster: Cryptochrome-1; n=55; Streptophyta|Rep:... 105 1e-21
UniRef50_A3QCZ8 Cluster: Deoxyribodipyrimidine photo-lyase; n=9;... 104 2e-21
UniRef50_Q0GKU4 Cluster: Cryptochrome 1 protein; n=1; Brassica r... 104 2e-21
UniRef50_Q4FL16 Cluster: Deoxyribodipyrimidine photolyase; n=4; ... 103 3e-21
UniRef50_A1WVH9 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;... 103 3e-21
UniRef50_Q86RA1 Cluster: Photolyase related protein; n=1; Aphroc... 102 7e-21
UniRef50_Q0C191 Cluster: Deoxyribodipyrimidine photolyase family... 102 1e-20
UniRef50_Q0APK4 Cluster: Deoxyribodipyrimidine photo-lyase; n=2;... 101 2e-20
UniRef50_A4A8B3 Cluster: Deoxyribodipyrimidine photo-lyase; n=4;... 101 2e-20
UniRef50_P25078 Cluster: Deoxyribodipyrimidine photo-lyase; n=43... 101 2e-20
UniRef50_Q41CV5 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 100 3e-20
UniRef50_Q116U8 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 100 3e-20
UniRef50_A6WVR6 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;... 100 4e-20
UniRef50_A0L6R4 Cluster: Deoxyribodipyrimidine photo-lyase; n=4;... 100 4e-20
UniRef50_Q39EN4 Cluster: Deoxyribodipyrimidine photolyase; n=42;... 100 7e-20
UniRef50_Q3VTE5 Cluster: Deoxyribodipyrimidine photolyase; n=3; ... 100 7e-20
UniRef50_Q6EAM9 Cluster: Cryptochrome 2A apoprotein; n=4; rosids... 98 2e-19
UniRef50_Q0VRI4 Cluster: DNA photolyase; n=1; Alcanivorax borkum... 97 5e-19
UniRef50_UPI0000E87D35 Cluster: deoxyribodipyrimidine photo-lyas... 96 6e-19
UniRef50_A4SQP9 Cluster: Deoxyribodipyrimidine photolyase; n=2; ... 95 1e-18
UniRef50_P12768 Cluster: Deoxyribodipyrimidine photo-lyase; n=6;... 95 1e-18
UniRef50_Q5ZYZ9 Cluster: Deoxyribodipyrimidine photolyase; n=4; ... 95 2e-18
UniRef50_Q0BXN5 Cluster: Deoxyribodipyrimidine photolyase family... 94 3e-18
UniRef50_Q8EBW1 Cluster: Deoxyribodipyrimidine photolyase; n=7; ... 94 3e-18
UniRef50_A3D723 Cluster: Deoxyribodipyrimidine photo-lyase; n=8;... 93 4e-18
UniRef50_A6GPG1 Cluster: Deoxyribodipyrimidine photolyase family... 93 8e-18
UniRef50_A4TUK0 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;... 93 8e-18
UniRef50_Q9RIY2 Cluster: Deoxiribopirymidine photolyase; n=1; St... 92 1e-17
UniRef50_Q2JW81 Cluster: Deoxyribodipyrimidine photolyase; n=2; ... 92 1e-17
UniRef50_P57386 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;... 92 1e-17
UniRef50_Q712D5 Cluster: Cryptochrome 2; n=7; Oryza sativa|Rep: ... 92 1e-17
UniRef50_Q5QV18 Cluster: Deoxyribodipyrimidine photolyase; n=2; ... 91 2e-17
UniRef50_A7D5J0 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;... 91 2e-17
UniRef50_Q2S050 Cluster: Deoxyribodipyrimidine photolyase, putat... 90 6e-17
UniRef50_A7SYS9 Cluster: Predicted protein; n=1; Nematostella ve... 89 1e-16
UniRef50_Q6FCZ9 Cluster: Deoxyribodipyrimidine photolyase (Photo... 88 2e-16
UniRef50_A3ETQ4 Cluster: Deoxyribodipyrimidine photolyase; n=2; ... 88 2e-16
UniRef50_A0Q6Z2 Cluster: Deoxyribodipyrimidine photolyase; n=6; ... 88 2e-16
UniRef50_Q087D0 Cluster: Deoxyribodipyrimidine photo-lyase; n=3;... 87 3e-16
UniRef50_A7HMU7 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;... 87 3e-16
UniRef50_Q3W0H9 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 87 4e-16
UniRef50_A7D4K1 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;... 87 4e-16
UniRef50_Q2SQU0 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 86 9e-16
UniRef50_Q1MZD6 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 86 9e-16
UniRef50_Q4P1D4 Cluster: Putative uncharacterized protein; n=1; ... 86 9e-16
UniRef50_Q4KML2 Cluster: Cryptochrome DASH; n=11; cellular organ... 85 1e-15
UniRef50_A6VUF2 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;... 85 2e-15
UniRef50_A0JYK6 Cluster: Deoxyribodipyrimidine photo-lyase; n=11... 85 2e-15
UniRef50_Q55081 Cluster: Deoxyribodipyrimidine photo-lyase; n=15... 85 2e-15
UniRef50_Q7UJB1 Cluster: Cryptochrome DASH; n=7; cellular organi... 85 2e-15
UniRef50_Q9HVD2 Cluster: Deoxyribodipyrimidine photolyase; n=22;... 85 2e-15
UniRef50_Q4T4M6 Cluster: Chromosome undetermined SCAF9582, whole... 84 3e-15
UniRef50_Q15TU1 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 84 3e-15
UniRef50_A0YDZ0 Cluster: Deoxyribodipyrimidine photolyase; n=3; ... 84 4e-15
UniRef50_Q2S3C6 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 83 5e-15
UniRef50_Q5V0Z1 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 83 6e-15
UniRef50_Q5V438 Cluster: Photolyase/cryptochrome; n=3; Halobacte... 83 8e-15
UniRef50_Q9HQ46 Cluster: Deoxyribodipyrimidine photo-lyase; n=5;... 83 8e-15
UniRef50_Q31DQ9 Cluster: Deoxyribodipyrimidine photolyase family... 81 3e-14
UniRef50_Q0S6Q2 Cluster: Deoxyribodipyrimidine photo-lyase; n=3;... 81 3e-14
UniRef50_A3X5Z0 Cluster: Deoxyribodipyrimidine photolyase; n=3; ... 81 3e-14
UniRef50_Q4P1U6 Cluster: Putative uncharacterized protein; n=1; ... 81 3e-14
UniRef50_Q0I8L2 Cluster: Deoxyribodipyrimidine photolyase family... 80 4e-14
UniRef50_Q46H89 Cluster: Deoxyribodipyrimidine photolyase; n=7; ... 80 6e-14
UniRef50_A0UAX4 Cluster: Deoxyribodipyrimidine photo-lyase; n=2;... 80 6e-14
UniRef50_Q89AJ9 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;... 80 6e-14
UniRef50_Q4PFI2 Cluster: Putative uncharacterized protein; n=1; ... 79 1e-13
UniRef50_Q5NMI6 Cluster: DNA photolyase; n=1; Zymomonas mobilis|... 79 1e-13
UniRef50_A1ZF62 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 79 1e-13
UniRef50_A1SV40 Cluster: Deoxyribodipyrimidine photo-lyase; n=9;... 78 2e-13
UniRef50_Q5DZH3 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 78 2e-13
UniRef50_Q1VSH5 Cluster: Putative deoxyribodipyrimidine photolya... 77 3e-13
UniRef50_Q2G0A6 Cluster: Deoxyribodipyrimidine photolyase, putat... 77 4e-13
UniRef50_A4M6R0 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;... 77 4e-13
UniRef50_A2BUZ7 Cluster: Putative deoxyribodipyrimidine photolya... 77 6e-13
UniRef50_Q5U9C7 Cluster: Cryptochrome 2; n=1; Erithacus rubecula... 76 1e-12
UniRef50_P27526 Cluster: Deoxyribodipyrimidine photo-lyase; n=16... 76 1e-12
UniRef50_Q1RKC7 Cluster: Deoxyribodipyrimidine photo-lyase; n=2;... 75 1e-12
UniRef50_A4BJR5 Cluster: Putative deoxyribodipyrimidine photolya... 75 1e-12
UniRef50_Q0IDI4 Cluster: Deoxyribodipyrimidine photolyase; n=10;... 75 2e-12
UniRef50_Q2BAD6 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 75 2e-12
UniRef50_A1ZPZ8 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 75 2e-12
UniRef50_Q2S3L9 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 72 1e-11
UniRef50_A3JA18 Cluster: Deoxyribodipyrimidine photolyase; n=2; ... 72 1e-11
UniRef50_Q18K78 Cluster: Deoxyribodipyrimidine photolyase; n=2; ... 72 1e-11
UniRef50_A5WDG4 Cluster: Deoxyribodipyrimidine photo-lyase; n=3;... 72 2e-11
UniRef50_Q1N8J8 Cluster: Deoxyribodipyrimidine photolyase; n=5; ... 71 4e-11
UniRef50_A1SER8 Cluster: Deoxyribodipyrimidine photo-lyase; n=12... 71 4e-11
UniRef50_A1U5B0 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;... 70 5e-11
UniRef50_Q12TR5 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 70 5e-11
UniRef50_A6H180 Cluster: Deoxyribodipyrimidine photolyase PhrB2;... 70 6e-11
UniRef50_Q8D319 Cluster: PhrB protein; n=1; Wigglesworthia gloss... 69 8e-11
UniRef50_Q4USX1 Cluster: Photolyase-like protein; n=6; Xanthomon... 69 8e-11
UniRef50_Q6BZK7 Cluster: Similar to tr|O93963 Trichoderma harzia... 69 1e-10
UniRef50_Q28R72 Cluster: Deoxyribodipyrimidine photolyase; n=5; ... 68 2e-10
UniRef50_A3J6I6 Cluster: Deoxyribodipyrimidine photolyase; n=4; ... 68 2e-10
UniRef50_A0Z3E3 Cluster: Deoxyribodipyrimidine photolyase, putat... 68 2e-10
UniRef50_Q1VSH4 Cluster: Deoxyribodipyrimidine photolyase-class ... 63 3e-10
UniRef50_A5GT79 Cluster: Deoxyribodipyrimidine photolyase; n=7; ... 67 3e-10
UniRef50_Q1EKB9 Cluster: Putative cryptochrome; n=4; Picea abies... 67 4e-10
UniRef50_Q389M9 Cluster: Deoxyribodipyrimidine photolyase, putat... 67 4e-10
UniRef50_Q30Q43 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 66 6e-10
UniRef50_A4S782 Cluster: Predicted protein; n=3; Ostreococcus|Re... 66 6e-10
UniRef50_A6EZB3 Cluster: Deoxyribodipyrimidine photolyase family... 66 8e-10
UniRef50_Q2BJV5 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 66 1e-09
UniRef50_Q7M8M8 Cluster: DEOXYRIBODIPYRIMIDINE PHOTOLYASE DNA PH... 65 1e-09
UniRef50_A6DFN1 Cluster: Deoxyribodipyrimidine photolyase; n=3; ... 65 1e-09
UniRef50_A5GQG9 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 65 2e-09
UniRef50_A4IYV0 Cluster: Deoxyribodipyrimidine photolyase; n=14;... 65 2e-09
UniRef50_Q6ML17 Cluster: Deoxyribodipyrimidine photolyase-class ... 64 2e-09
UniRef50_Q0V6S3 Cluster: Putative uncharacterized protein; n=1; ... 63 6e-09
UniRef50_Q6L055 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 63 6e-09
UniRef50_Q8FRW1 Cluster: Deoxyribodipyrimidine photolyase; n=5; ... 61 3e-08
UniRef50_Q23DL8 Cluster: FAD binding domain of DNA photolyase fa... 60 4e-08
UniRef50_A0YV59 Cluster: Deoxyribodipyrimidine photolyase; n=4; ... 60 7e-08
UniRef50_A0LR66 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;... 60 7e-08
UniRef50_Q47SJ5 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 59 1e-07
UniRef50_Q4QHY9 Cluster: DNA photolyase, putative; n=3; Leishman... 58 2e-07
UniRef50_Q4E3Z7 Cluster: DNA photolyase, putative; n=4; Trypanos... 58 2e-07
UniRef50_A3JAL3 Cluster: Deoxyribodipyrimidine photolyase; n=4; ... 56 6e-07
UniRef50_Q5IFN2 Cluster: Cryptochrome DASH, chloroplast/mitochon... 56 8e-07
UniRef50_Q14N08 Cluster: Putative deoxyribodipyrimidine photolya... 56 1e-06
UniRef50_Q84KJ5 Cluster: Cryptochrome DASH, chloroplast/mitochon... 56 1e-06
UniRef50_A3JBH1 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 55 1e-06
UniRef50_A7P504 Cluster: Chromosome chr4 scaffold_6, whole genom... 55 1e-06
UniRef50_Q4Q4G2 Cluster: Deoxyribodipyrimidine photolyase, putat... 55 1e-06
UniRef50_Q97VY1 Cluster: Deoxyribodipyrimidine photolyase (DNA p... 54 3e-06
UniRef50_Q9KK82 Cluster: Hypothetical DNA photolyase; n=3; Actin... 54 3e-06
UniRef50_Q1GUF7 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 54 4e-06
UniRef50_Q15ZK4 Cluster: Deoxyribodipyrimidine photolyase; n=2; ... 53 6e-06
UniRef50_Q6CSJ7 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 53 8e-06
UniRef50_UPI0000E0FEC6 Cluster: deoxyribodipyrimidine photolyase... 52 1e-05
UniRef50_Q9KS67 Cluster: Cryptochrome-like protein cry2; n=15; G... 51 2e-05
UniRef50_P61496 Cluster: Deoxyribodipyrimidine photo-lyase; n=2;... 50 4e-05
UniRef50_Q41DS7 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 50 7e-05
UniRef50_A6CY79 Cluster: Deoxyribodipyrimidine photolyase; n=3; ... 50 7e-05
UniRef50_A1IU21 Cluster: Deoxyribodopyrimidine photolyase; n=3; ... 50 7e-05
UniRef50_Q5LS53 Cluster: Deoxyribodipyrimidine photolyase; n=25;... 49 1e-04
UniRef50_A4CAK2 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 49 1e-04
UniRef50_A1SV39 Cluster: DNA photolyase, FAD-binding-domain prot... 49 1e-04
UniRef50_Q5QXE0 Cluster: Cryptochrome DASH; n=4; Gammaproteobact... 48 2e-04
UniRef50_A0Y3K3 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 48 3e-04
UniRef50_UPI0000E0FEEE Cluster: Deoxyribodipyrimidine photolyase... 47 5e-04
UniRef50_P05066 Cluster: Deoxyribodipyrimidine photo-lyase, mito... 47 5e-04
UniRef50_A4A625 Cluster: Deoxyribodipyrimidine photolyase; n=2; ... 46 7e-04
UniRef50_Q0UKK2 Cluster: Putative uncharacterized protein; n=1; ... 46 0.001
UniRef50_Q9KR33 Cluster: Cryptochrome DASH; n=22; Gammaproteobac... 46 0.001
UniRef50_Q1MZA5 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 44 0.003
UniRef50_A7R122 Cluster: Chromosome undetermined scaffold_334, w... 44 0.004
UniRef50_A7QH40 Cluster: Chromosome chr3 scaffold_95, whole geno... 44 0.004
UniRef50_Q6NKC0 Cluster: Putative riboflavin biosynthesis protei... 42 0.011
UniRef50_A4WX50 Cluster: Deoxyribodipyrimidine photo-lyase; n=3;... 42 0.011
UniRef50_A3Y1I2 Cluster: Deoxyribodipyrimidine photolyase; n=3; ... 42 0.019
UniRef50_Q11W86 Cluster: Deoxyribodipyrimidine photolyase; n=2; ... 41 0.025
UniRef50_Q7SI68 Cluster: Putative cryptochrome DASH, mitochondri... 41 0.034
UniRef50_A0HIH4 Cluster: DNA photolyase, FAD-binding; n=1; Comam... 40 0.078
UniRef50_Q1G0Y2 Cluster: Cryptochrome dash; n=1; Karenia brevis|... 39 0.10
UniRef50_Q4I1Q6 Cluster: Putative cryptochrome DASH; n=1; Gibber... 39 0.10
UniRef50_A6EG08 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 39 0.14
UniRef50_A6S5S9 Cluster: Putative uncharacterized protein; n=2; ... 39 0.14
UniRef50_A4CPD0 Cluster: Deoxyribodipyrimidine photolyase; n=4; ... 38 0.18
UniRef50_A2QZX5 Cluster: Contig An12c0190, complete genome; n=2;... 38 0.24
UniRef50_Q0C4R4 Cluster: Putative uncharacterized protein; n=1; ... 38 0.31
UniRef50_A4BCW2 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 38 0.31
UniRef50_A4B8N9 Cluster: Deoxyribodipyrimidine photolyase, putat... 37 0.55
UniRef50_Q67G26 Cluster: Membrane transport protein; n=2; Actino... 36 0.72
UniRef50_Q947B4 Cluster: Cryptochrome 1a; n=7; Poaceae|Rep: Cryp... 36 0.72
UniRef50_A5GIC8 Cluster: FAD binding domain of DNA photolyase; n... 36 0.96
UniRef50_A0M4X6 Cluster: Cryptochrome-like DNA photolyase family... 36 0.96
UniRef50_Q4PJE0 Cluster: Predicted deoxyribodipyrimidine photoly... 36 1.3
UniRef50_UPI0001555137 Cluster: PREDICTED: hypothetical protein,... 35 1.7
UniRef50_A2C3R3 Cluster: DNA photolyase-like protein; n=2; Proch... 35 2.2
UniRef50_A4GI46 Cluster: Deoxyribodipyrimidine photolyase; n=2; ... 34 2.9
UniRef50_Q6SFP7 Cluster: Deoxyribodipyrimidine photolyase family... 34 3.9
UniRef50_A6GLE5 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 34 3.9
UniRef50_A0VAK1 Cluster: Uncharacterized protein UPF0065 precurs... 33 6.7
UniRef50_Q96SB4 Cluster: Serine/threonine-protein kinase SRPK1; ... 33 6.7
UniRef50_UPI0000E23955 Cluster: PREDICTED: similar to heat shock... 33 8.9
UniRef50_UPI0000DA3FAC Cluster: PREDICTED: similar to Zinc finge... 33 8.9
UniRef50_Q8DLE3 Cluster: Tll0552 protein; n=1; Synechococcus elo... 33 8.9
UniRef50_A2X003 Cluster: Putative uncharacterized protein; n=3; ... 33 8.9
>UniRef50_Q49AN0 Cluster: Cryptochrome-2; n=106; Eumetazoa|Rep:
Cryptochrome-2 - Homo sapiens (Human)
Length = 593
Score = 266 bits (653), Expect = 3e-70
Identities = 110/165 (66%), Positives = 135/165 (81%)
Frame = +3
Query: 60 ARGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADW 239
A GK +PW DAIM QLR+EGWIHHL+RHAVACFLTRGDLW+SWE G++VFDELLLDAD+
Sbjct: 350 AEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWESGVRVFDELLLDADF 409
Query: 240 SVNAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMA 419
SVNAG WMW HCYCPV FGR+TDP+GD+IR+Y+P LK P+RYI+EPW A
Sbjct: 410 SVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYIRRYLPKLKAFPSRYIYEPWNA 469
Query: 420 PESVQAAAQCSIGRDYPMPMVDHTKASQINIERIKQVYAQLARYK 554
PES+Q AA+C IG DYP P+V+H + S++NIER+KQ+Y QL+RY+
Sbjct: 470 PESIQKAAKCIIGVDYPRPIVNHAETSRLNIERMKQIYQQLSRYR 514
>UniRef50_Q7ZYX5 Cluster: Cry4 protein; n=13; Euteleostomi|Rep: Cry4
protein - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 579
Score = 237 bits (579), Expect = 2e-61
Identities = 98/151 (64%), Positives = 120/151 (79%)
Frame = +3
Query: 78 YPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSVNAGM 257
+PW DAIM QLR+EGWIHHL+RHAVACFLTRGDLWI+WEEGMKVF+E LLDAD+SVNAG
Sbjct: 355 FPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWITWEEGMKVFEEFLLDADYSVNAGN 414
Query: 258 WMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMAPESVQA 437
WMW +CPVRFGR+TDP G+++RKY+P LKN P++YI+EPW APE VQ
Sbjct: 415 WMWLSASAFFHKYTRIFCPVRFGRRTDPQGEYLRKYLPVLKNFPSQYIYEPWKAPEDVQL 474
Query: 438 AAQCSIGRDYPMPMVDHTKASQINIERIKQV 530
+A C IG+DYP P+V H +ASQ N+ ++QV
Sbjct: 475 SAGCIIGKDYPRPIVSHIEASQRNLALMRQV 505
>UniRef50_Q4T244 Cluster: Chromosome undetermined SCAF10345, whole
genome shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome undetermined SCAF10345, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 662
Score = 236 bits (578), Expect = 3e-61
Identities = 108/186 (58%), Positives = 129/186 (69%), Gaps = 21/186 (11%)
Frame = +3
Query: 60 ARGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKV---------- 209
A G+ +PW DAIM QLR+EGWIHH +R A ACFLTRGDLWISWE GMKV
Sbjct: 466 AEGRTGFPWIDAIMTQLRQEGWIHHQARRASACFLTRGDLWISWECGMKVGGPPWSRRRR 525
Query: 210 -----------FDELLLDADWSVNAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFI 356
F+ELLLDADWSVNAG WMW CYCPV FGR+TDP+GD+I
Sbjct: 526 RRLSARLLPQVFEELLLDADWSVNAGSWMWLSCSAFFQQFFKCYCPVGFGRRTDPSGDYI 585
Query: 357 RKYIPALKNMPTRYIHEPWMAPESVQAAAQCSIGRDYPMPMVDHTKASQINIERIKQVYA 536
R+YIP LK+ P RYI+EPW APE+VQ AA C +G DYP PM++H + S++NIER+KQVY
Sbjct: 586 RRYIPILKDYPNRYIYEPWNAPEAVQKAANCVVGVDYPRPMINHAEGSRLNIERMKQVYQ 645
Query: 537 QLARYK 554
QL+ Y+
Sbjct: 646 QLSHYR 651
>UniRef50_A7S6B3 Cluster: Predicted protein; n=3; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 513
Score = 210 bits (514), Expect = 2e-53
Identities = 86/159 (54%), Positives = 111/159 (69%)
Frame = +3
Query: 66 GKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSV 245
GK +PW DAIM QLREEGWIHHL+R AV CFLTRG LW+SWEEG K FDEL LDA+WS+
Sbjct: 346 GKTGFPWIDAIMRQLREEGWIHHLARQAVGCFLTRGCLWVSWEEGFKAFDELQLDAEWSL 405
Query: 246 NAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMAPE 425
NA W+W YCPV G+K DP GD+I++Y+P ++ +P+ Y+ EPW AP
Sbjct: 406 NASNWLWLSCSSYVHGAVPWYCPVEVGKKVDPTGDYIKRYVPEVRGLPSEYVCEPWNAPL 465
Query: 426 SVQAAAQCSIGRDYPMPMVDHTKASQINIERIKQVYAQL 542
SVQ A +C +G DYP P+VDH + I ++R++Q+ L
Sbjct: 466 SVQKACRCVVGEDYPSPIVDHMEQRMICVQRMQQLSIDL 504
>UniRef50_Q52Z99 Cluster: 6-4 photolyase; n=4; Viridiplantae|Rep:
6-4 photolyase - Dunaliella salina
Length = 600
Score = 203 bits (495), Expect = 4e-51
Identities = 88/156 (56%), Positives = 108/156 (69%)
Frame = +3
Query: 66 GKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSV 245
G YPW DA M QLRE GW+HHL+RH+VACFLTRGDL++SWE G +VF+ELLLDAD+ +
Sbjct: 379 GATGYPWIDAAMTQLREWGWMHHLARHSVACFLTRGDLYLSWESGKEVFEELLLDADYFI 438
Query: 246 NAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMAPE 425
NA WMW Y PV FG+K D G +IRK++P LK+MP +YI+EPW AP+
Sbjct: 439 NAANWMWLSASAFFAQYFRVYSPVVFGKKYDKEGAYIRKFLPVLKDMPAKYIYEPWTAPK 498
Query: 426 SVQAAAQCSIGRDYPMPMVDHTKASQINIERIKQVY 533
VQ A C IGRDYP P+VDH AS+ I R+ Y
Sbjct: 499 EVQQRANCIIGRDYPAPIVDHAVASKECIARMGAAY 534
>UniRef50_O48652 Cluster: 6-4 photolyase; n=3; Arabidopsis
thaliana|Rep: 6-4 photolyase - Arabidopsis thaliana
(Mouse-ear cress)
Length = 537
Score = 200 bits (489), Expect = 2e-50
Identities = 83/157 (52%), Positives = 109/157 (69%)
Frame = +3
Query: 66 GKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSV 245
GK YPW DAIM+QL + GW+HHL+RH VACFLTRGDL+I WE+G VF+ LL+D+DW++
Sbjct: 342 GKTGYPWIDAIMVQLLKWGWMHHLARHCVACFLTRGDLFIHWEQGRDVFERLLIDSDWAI 401
Query: 246 NAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMAPE 425
N G WMW Y P+ FG+K DP+G +IR ++P LK+MP +YI+EPW AP
Sbjct: 402 NNGNWMWLSCSSFFYQFNRIYSPISFGKKYDPDGKYIRHFLPVLKDMPKQYIYEPWTAPL 461
Query: 426 SVQAAAQCSIGRDYPMPMVDHTKASQINIERIKQVYA 536
SVQ A C +G+DYP PMV H AS+ ++ + YA
Sbjct: 462 SVQTKANCIVGKDYPKPMVLHDSASKECKRKMGEAYA 498
>UniRef50_Q019Z4 Cluster: Cryptochrome-like protein 1; n=4;
Ostreococcus|Rep: Cryptochrome-like protein 1 -
Ostreococcus tauri
Length = 1646
Score = 194 bits (474), Expect = 1e-48
Identities = 85/178 (47%), Positives = 115/178 (64%), Gaps = 2/178 (1%)
Frame = +3
Query: 9 ANCGELTQRRANQLQFRA--RGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLW 182
A C ++ ++ +L F A + +PW DA M QLR EGW+HHL+RHAVACFLTRGDL+
Sbjct: 1453 AICRQIPWKKDREL-FAAWENAQTGFPWIDAAMTQLRREGWLHHLARHAVACFLTRGDLF 1511
Query: 183 ISWEEGMKVFDELLLDADWSVNAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRK 362
I WE G FD L+DADW++N G WMW Y P+ F +K D +G ++R
Sbjct: 1512 IHWEWGRDAFDRDLVDADWALNNGNWMWLSCSAFFYQYFRVYSPIAFAKKYDKDGQYVRH 1571
Query: 363 YIPALKNMPTRYIHEPWMAPESVQAAAQCSIGRDYPMPMVDHTKASQINIERIKQVYA 536
Y+P LKNMP++Y++EPW+AP VQ A C +G DYP P+VDH+ AS+ ++ I YA
Sbjct: 1572 YLPVLKNMPSKYVYEPWLAPLDVQKKAGCVVGVDYPAPIVDHSAASKRCVDDIATAYA 1629
>UniRef50_A7P7Q6 Cluster: Chromosome chr9 scaffold_7, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr9 scaffold_7, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 547
Score = 192 bits (468), Expect = 7e-48
Identities = 75/133 (56%), Positives = 99/133 (74%)
Frame = +3
Query: 78 YPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSVNAGM 257
YPW DAIM+QLR+ GW+HHL+RH VACFLTRGDL++ WE+G VF+ LL+D+DW++N G
Sbjct: 346 YPWIDAIMVQLRKWGWMHHLARHCVACFLTRGDLFVHWEKGRDVFERLLIDSDWAINNGN 405
Query: 258 WMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMAPESVQA 437
W+W Y P+ FG+K DPNG++IR ++P LK+MP YI+EPW AP S+QA
Sbjct: 406 WLWLSCSSFFYQYNRIYSPISFGKKYDPNGNYIRHFLPILKDMPKEYIYEPWTAPPSIQA 465
Query: 438 AAQCSIGRDYPMP 476
A+C IG+DYP P
Sbjct: 466 KAKCIIGKDYPKP 478
>UniRef50_Q4SAM2 Cluster: Chromosome undetermined SCAF14682, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF14682,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 606
Score = 182 bits (442), Expect = 1e-44
Identities = 80/137 (58%), Positives = 96/137 (70%), Gaps = 5/137 (3%)
Frame = +3
Query: 60 ARGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADW 239
A K +PW DAIM QLR+EGWIHHL+RHAVACFLTRGDLWISWEEGMKVF+ELLLDADW
Sbjct: 298 AEAKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADW 357
Query: 240 SVNAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPAL-----KNMPTRYIH 404
SVNAG WMW HCYCPV FGR+TDPNGDFI + + A ++ R +
Sbjct: 358 SVNAGSWMWLSCSSFFQQFFHCYCPVGFGRRTDPNGDFISRSLLASSSDGGRSPSVRLLP 417
Query: 405 EPWMAPESVQAAAQCSI 455
P ++ S+ + +C +
Sbjct: 418 RPALSTPSISDSQRCIV 434
>UniRef50_Q4PCL9 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 684
Score = 168 bits (408), Expect = 1e-40
Identities = 75/156 (48%), Positives = 94/156 (60%)
Frame = +3
Query: 66 GKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSV 245
G+ +PW DA+M QLR EGW+HHL RH+VA FLTRG WISWE G ++FDE L+D D
Sbjct: 415 GQTGFPWIDALMRQLRLEGWMHHLGRHSVAAFLTRGQCWISWERGAEIFDEYLIDWDPCS 474
Query: 246 NAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMAPE 425
N G WMW Y F K D G +RKY P L P +YI+EP+ AP+
Sbjct: 475 NPGNWMWLSCSAFFTQYFRLYGLATFPAKYDKTGALVRKYCPELAKFPDKYIYEPFNAPK 534
Query: 426 SVQAAAQCSIGRDYPMPMVDHTKASQINIERIKQVY 533
VQ A C IG+DYP+PM+D +A N+ R+K Y
Sbjct: 535 EVQQKAGCIIGKDYPLPMLDEKEAKAENMARMKICY 570
>UniRef50_Q4T243 Cluster: Chromosome undetermined SCAF10345, whole
genome shotgun sequence; n=2; Tetraodontidae|Rep:
Chromosome undetermined SCAF10345, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 642
Score = 167 bits (407), Expect = 2e-40
Identities = 80/143 (55%), Positives = 92/143 (64%), Gaps = 21/143 (14%)
Frame = +3
Query: 138 SRHAVACFLTRGDLWISWEEGMKV---------------------FDELLLDADWSVNAG 254
+R AVACFLTRGDLWISWE GMKV F+ELLLDADWSVNAG
Sbjct: 453 ARRAVACFLTRGDLWISWECGMKVGGAAWSRRRRRRLSARLLPQVFEELLLDADWSVNAG 512
Query: 255 MWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMAPESVQ 434
WMW CYCPV FGR+TDP+GD+IR+YIP LK+ P RYI+EPW APE+VQ
Sbjct: 513 SWMWLSCSAFFQQFFKCYCPVGFGRRTDPSGDYIRRYIPILKDYPNRYIYEPWNAPEAVQ 572
Query: 435 AAAQCSIGRDYPMPMVDHTKASQ 503
AA C +G DYP PM+ + Q
Sbjct: 573 KAANCVVGVDYPRPMIQPRRGQQ 595
>UniRef50_A2R6W6 Cluster: Cofactor: FAD; n=1; Aspergillus niger|Rep:
Cofactor: FAD - Aspergillus niger
Length = 567
Score = 162 bits (393), Expect = 9e-39
Identities = 72/156 (46%), Positives = 94/156 (60%)
Frame = +3
Query: 66 GKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSV 245
G+ +PW DA+M QL+ EGWIHHL RH+VACFLTRG ++ WE G +VF+E L+D + +
Sbjct: 345 GRTGFPWIDALMRQLKNEGWIHHLGRHSVACFLTRGGCYVHWERGAEVFEEWLIDHETAS 404
Query: 246 NAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMAPE 425
N G WMW CY PV FG+K DP G FIR YIP L++ +YI+EPW AP
Sbjct: 405 NVGNWMWLSCTAFFTQYNRCYSPVAFGKKWDPEGRFIRHYIPELEHYDKKYIYEPWKAPL 464
Query: 426 SVQAAAQCSIGRDYPMPMVDHTKASQINIERIKQVY 533
Q + YP PM D + Q I ++K+ Y
Sbjct: 465 EDQKR-----WKSYPEPMFDFDERRQTCIAQMKEAY 495
>UniRef50_A4QZX5 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 614
Score = 161 bits (390), Expect = 2e-38
Identities = 74/167 (44%), Positives = 102/167 (61%), Gaps = 11/167 (6%)
Frame = +3
Query: 66 GKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSV 245
G+ +PW DA+M QLR EGWIHHL RH+VACFLTRG ++SWE G+ VF+ELLLD + +
Sbjct: 350 GQTGFPWIDALMRQLRVEGWIHHLGRHSVACFLTRGGCYVSWERGLDVFEELLLDHEPAC 409
Query: 246 NAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMAPE 425
NAG W W CY P+ FG+K DP+G FIRK++P L ++ +YI+EPW APE
Sbjct: 410 NAGNWQWLSCTAFFSQYFRCYSPISFGKKWDPDGTFIRKWVPELASLDKKYIYEPWKAPE 469
Query: 426 S------VQAAAQCSIG-----RDYPMPMVDHTKASQINIERIKQVY 533
+ V ++ +G Y PM D + ++ + +KQ Y
Sbjct: 470 AELRRAGVVMVSEGGVGGGGASGTYFTPMFDFDERRRVCMRLMKQAY 516
>UniRef50_A1CJL8 Cluster: DNA photolyase, putative; n=4;
Pezizomycotina|Rep: DNA photolyase, putative -
Aspergillus clavatus
Length = 613
Score = 159 bits (387), Expect = 5e-38
Identities = 71/171 (41%), Positives = 98/171 (57%), Gaps = 14/171 (8%)
Frame = +3
Query: 66 GKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSV 245
G+ +PW DA+M QL+ EGWIHHL RH+VACFLTRG ++SWE G +VF++ L+D + +
Sbjct: 397 GRTGFPWIDALMRQLKLEGWIHHLGRHSVACFLTRGGCYVSWERGAEVFEDWLVDHETAC 456
Query: 246 NAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMAPE 425
N G W W HCY P+ FG+K DP G+F+R+Y P L N +YI+EPW AP
Sbjct: 457 NVGNWQWLSCTAFYSQYYHCYSPIAFGKKWDPEGEFVRRYCPELANFDKKYIYEPWKAPL 516
Query: 426 SVQAAAQCSIGRD--------------YPMPMVDHTKASQINIERIKQVYA 536
Q C + D YP PM D + +I ++ +K Y+
Sbjct: 517 PDQKKWGCRVTGDGSGSDDSKHEGLAVYPKPMFDFDERRRICLDGMKHAYS 567
>UniRef50_O77059 Cluster: CG3772-PA; n=15; Coelomata|Rep: CG3772-PA
- Drosophila melanogaster (Fruit fly)
Length = 542
Score = 145 bits (351), Expect = 1e-33
Identities = 70/174 (40%), Positives = 95/174 (54%), Gaps = 2/174 (1%)
Frame = +3
Query: 42 NQLQFRARGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDEL 221
N LQ G+ +P D M QL EGW+HH R+ VA FLTRG LW SWE G++ F +
Sbjct: 348 NLLQSWRLGQTGFPLIDGAMRQLLAEGWLHHTLRNTVATFLTRGGLWQSWEHGLQHFLKY 407
Query: 222 LLDADWSVNAGMWMWXXXXXXXXXXXHCY--CPVRFGRKTDPNGDFIRKYIPALKNMPTR 395
LLDADWSV AG WMW CPV ++ DP+G +I++Y+P L N+P
Sbjct: 408 LLDADWSVCAGNWMWVSSSAFERLLDSSLVTCPVALAKRLDPDGTYIKQYVPELMNVPKE 467
Query: 396 YIHEPWMAPESVQAAAQCSIGRDYPMPMVDHTKASQINIERIKQVYAQLARYKP 557
++HEPW Q +C IG YP ++D + A + N+ +K + L P
Sbjct: 468 FVHEPWRMSAEQQEQYECLIGVHYPERIIDLSMAVKRNMLAMKSLRNSLITPPP 521
>UniRef50_Q8N7D9 Cluster: CDNA FLJ25749 fis, clone TST06111, highly
similar to Homo sapiens photolyase; n=2; Homo
sapiens|Rep: CDNA FLJ25749 fis, clone TST06111, highly
similar to Homo sapiens photolyase - Homo sapiens
(Human)
Length = 194
Score = 134 bits (324), Expect = 2e-30
Identities = 55/99 (55%), Positives = 75/99 (75%)
Frame = +3
Query: 300 HCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMAPESVQAAAQCSIGRDYPMPM 479
HCYCPV FGR+TDPNGD+IR+Y+P L+ P +YI++ W APE +Q A+C IG +YP PM
Sbjct: 19 HCYCPVGFGRRTDPNGDYIRRYLPVLRGFPAKYIYDLWNAPEGIQKVAKCLIGVNYPKPM 78
Query: 480 VDHTKASQINIERIKQVYAQLARYKPQATLNANAVQRPN 596
V+H +AS++NIER+KQ+Y QL+RY+ L A+ PN
Sbjct: 79 VNHAEASRLNIERMKQIYQQLSRYRGLGLL-ASVPSNPN 116
>UniRef50_Q6HWS5 Cluster: Deoxyribodipyrimidine photolyase family
protein; n=8; Bacillus cereus group|Rep:
Deoxyribodipyrimidine photolyase family protein -
Bacillus anthracis
Length = 476
Score = 126 bits (304), Expect = 5e-28
Identities = 61/148 (41%), Positives = 87/148 (58%), Gaps = 1/148 (0%)
Frame = +3
Query: 63 RGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWS 242
+G YP+ DA M +L + G++H+ +R AVA FL + L I W+EG K F + LLDAD +
Sbjct: 317 KGDTGYPFIDAGMRELWQTGFMHNRTRMAVASFLVK-HLLIPWQEGAKWFMDTLLDADIA 375
Query: 243 VNAGMWMWXXXXXXXXXXX-HCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMA 419
N W W + P+ G K D NG++IRK++P LK+MP +YIH+PW A
Sbjct: 376 NNTMGWQWVAGSGADASPYFRIFNPITQGEKFDKNGEYIRKWVPELKDMPNKYIHKPWEA 435
Query: 420 PESVQAAAQCSIGRDYPMPMVDHTKASQ 503
PE + A +G YP+P+VDH A +
Sbjct: 436 PEHILQKANIQLGHTYPLPVVDHKAARE 463
>UniRef50_Q3E438 Cluster: DNA photolyase, FAD-binding:DNA
photolyase, N-terminal; n=4; Chloroflexi (class)|Rep:
DNA photolyase, FAD-binding:DNA photolyase, N-terminal -
Chloroflexus aurantiacus J-10-fl
Length = 534
Score = 126 bits (304), Expect = 5e-28
Identities = 64/143 (44%), Positives = 82/143 (57%), Gaps = 1/143 (0%)
Frame = +3
Query: 63 RGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWS 242
+G YP DA M QL+ EGW+H+ +R VA FLT+ DL I W G + F LL+D D +
Sbjct: 367 QGLTGYPIVDAAMRQLQREGWMHNRARMIVASFLTK-DLLIDWRWGERHFMHLLIDGDPA 425
Query: 243 VNAGMWMWXXXXXXXXXXX-HCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMA 419
N G W W + PV G+K DP G ++R+Y+P L N+PTRYIHEP
Sbjct: 426 ANNGGWQWAAGTGTDAQPFFRIFNPVSQGQKFDPEGAYVRRYVPELVNVPTRYIHEPHKM 485
Query: 420 PESVQAAAQCSIGRDYPMPMVDH 488
+ Q A IGRDYP P+VDH
Sbjct: 486 SLAEQRKAGVLIGRDYPAPIVDH 508
>UniRef50_Q04449 Cluster: Deoxyribodipyrimidine photo-lyase; n=13;
Bacilli|Rep: Deoxyribodipyrimidine photo-lyase -
Bacillus pseudofirmus
Length = 339
Score = 124 bits (299), Expect = 2e-27
Identities = 60/145 (41%), Positives = 80/145 (55%), Gaps = 1/145 (0%)
Frame = +3
Query: 63 RGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWS 242
RG+ +P DA M QL EGW+H+ R A FLT+ DL I W G + F+ +L+D D S
Sbjct: 181 RGETGFPIVDAGMRQLLNEGWMHNRLRMITASFLTK-DLLIDWRLGERYFERMLIDYDPS 239
Query: 243 VNAGMWMWXXXXXXXXXXX-HCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMA 419
N G W W + PV ++ D NG +IR YIP L ++P YIHEPW
Sbjct: 240 SNIGGWQWAASVGTDAVPYFRIFNPVTQSKRFDENGTYIRTYIPELNHVPDHYIHEPWKM 299
Query: 420 PESVQAAAQCSIGRDYPMPMVDHTK 494
E Q +C + DYP+P+VDH+K
Sbjct: 300 SEEEQVKYKCRLDEDYPLPIVDHSK 324
>UniRef50_A5UYV1 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;
Roseiflexus sp. RS-1|Rep: Deoxyribodipyrimidine
photo-lyase - Roseiflexus sp. RS-1
Length = 491
Score = 122 bits (294), Expect = 8e-27
Identities = 59/144 (40%), Positives = 79/144 (54%), Gaps = 1/144 (0%)
Frame = +3
Query: 66 GKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSV 245
G+ YP DA M QL E W+H+ +R VA FLT+ DL I W G + F + L+D D +
Sbjct: 334 GRTGYPVVDAAMRQLNREAWMHNRARMIVASFLTK-DLLIDWRWGERYFMQQLVDGDHAA 392
Query: 246 NAGMWMWXXXXXXXXXXX-HCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMAP 422
N G W W + PV G+ DP G ++R+Y+P L+ +P RYIH PW P
Sbjct: 393 NNGGWQWSAGTGTDAQPYFRIFNPVSQGQTFDPKGAYVRRYLPELEAVPDRYIHAPWTMP 452
Query: 423 ESVQAAAQCSIGRDYPMPMVDHTK 494
+ Q IGRDYP P+VDH +
Sbjct: 453 YAEQQRCGVIIGRDYPAPVVDHAE 476
>UniRef50_Q6MDF3 Cluster: Putative photolyase; n=1; Candidatus
Protochlamydia amoebophila UWE25|Rep: Putative
photolyase - Protochlamydia amoebophila (strain UWE25)
Length = 471
Score = 115 bits (276), Expect = 1e-24
Identities = 59/161 (36%), Positives = 88/161 (54%), Gaps = 1/161 (0%)
Frame = +3
Query: 63 RGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWS 242
+G+ YP DA M QL + GW+H+ R V FL + DL I W EG K F + L+DAD +
Sbjct: 316 KGQTGYPIIDAGMRQLWKIGWMHNRVRLIVGSFLVK-DLMIHWIEGAKWFWDTLVDADLA 374
Query: 243 VNAGMWMWXXXXXXXXXXX-HCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMA 419
N W W + P+ G K DP G++++K++P L N+P ++H+PW A
Sbjct: 375 NNTMGWQWIAGCGADAAPYFRIFNPITQGEKFDPEGNYVKKWVPELINLPKEWLHQPWEA 434
Query: 420 PESVQAAAQCSIGRDYPMPMVDHTKASQINIERIKQVYAQL 542
PE + + +G +YP P+V+H KA E Q Y++L
Sbjct: 435 PEEILRQSGIELGINYPKPIVNHAKAR----EEALQAYSRL 471
>UniRef50_Q21MT8 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Saccharophagus degradans 2-40|Rep: Deoxyribodipyrimidine
photolyase - Saccharophagus degradans (strain 2-40 /
ATCC 43961 / DSM 17024)
Length = 483
Score = 114 bits (274), Expect = 2e-24
Identities = 61/167 (36%), Positives = 88/167 (52%), Gaps = 3/167 (1%)
Frame = +3
Query: 39 ANQLQFRARGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDE 218
A QL G YP DA M QL + GW+H+ R VA FLT+ L I W EG K F +
Sbjct: 315 AKQLHAWQTGTTGYPIVDAGMRQLWQTGWMHNRVRMIVASFLTK-HLRIHWHEGAKWFWD 373
Query: 219 LLLDADWSVNAGMWMWXXXXXXXXXXX-HCYCPVRFGRKTDPNGDFIRKYIPALKNMPTR 395
L+DAD + N W W + PV G K D G++I+ ++P L +P +
Sbjct: 374 TLVDADLANNTAGWQWVAGCGADAAPYFRIFNPVLQGEKFDKQGEYIKTWVPELAALPAK 433
Query: 396 YIHEPWMAPESVQAAAQCSIGRD--YPMPMVDHTKASQINIERIKQV 530
+IH PW+AP+ + A S+G + YP+P+VDH A + + +Q+
Sbjct: 434 FIHAPWLAPQDILQTAGISLGNNSTYPLPIVDHKYAREAALAAYQQL 480
>UniRef50_A1KB68 Cluster: Deoxyribodipyrimidine photo-lyase; n=24;
Betaproteobacteria|Rep: Deoxyribodipyrimidine
photo-lyase - Azoarcus sp. (strain BH72)
Length = 503
Score = 114 bits (274), Expect = 2e-24
Identities = 60/152 (39%), Positives = 79/152 (51%), Gaps = 1/152 (0%)
Frame = +3
Query: 66 GKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSV 245
G+ YP DA M QL G++H+ R VA FLT+ DL + W G + F L D D +
Sbjct: 346 GRTGYPIVDAGMRQLLRSGYMHNRLRMIVASFLTK-DLGVDWRLGERHFAAHLNDYDLAA 404
Query: 246 NAGMWMWXXXXXXXXXXX-HCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMAP 422
N G W W + PV +K DP G FIR+Y+P L +P R+IH PW
Sbjct: 405 NNGGWQWAASTGCDAQPYFRIFNPVTQSQKFDPEGRFIRRYVPELARVPDRHIHAPWQMD 464
Query: 423 ESVQAAAQCSIGRDYPMPMVDHTKASQINIER 518
+ Q+ A IGRDYP P+VDH A + + R
Sbjct: 465 AATQSRACVQIGRDYPAPVVDHALARERTLAR 496
>UniRef50_Q9KNA8 Cluster: Deoxyribodipyrimidine photo-lyase; n=25;
Gammaproteobacteria|Rep: Deoxyribodipyrimidine
photo-lyase - Vibrio cholerae
Length = 469
Score = 111 bits (268), Expect = 1e-23
Identities = 59/161 (36%), Positives = 84/161 (52%), Gaps = 1/161 (0%)
Frame = +3
Query: 45 QLQFRARGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELL 224
+ Q GK YP DA M QL + GW+H+ R VA FLT+ DL I W G + F L
Sbjct: 314 KFQLWCEGKTGYPIVDAAMRQLNQTGWMHNRLRMIVASFLTK-DLHIDWRWGERYFMSRL 372
Query: 225 LDADWSVNAGMWMWXXXXXXXXXXX-HCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYI 401
+D D++ N G W W + PV G K DPNGDFIR+++P L+++ + YI
Sbjct: 373 IDGDYAANNGGWQWCASTGCDGQPYFRIFNPVSQGEKFDPNGDFIRRWVPELRSVSSAYI 432
Query: 402 HEPWMAPESVQAAAQCSIGRDYPMPMVDHTKASQINIERIK 524
H+PW P +V + YP +VDH + ++ + K
Sbjct: 433 HQPWTYP-AVNSVL-------YPARLVDHKQEREVTLRLYK 465
>UniRef50_Q83CE4 Cluster: Deoxyribodipyrimidine photolyase-class I;
n=4; Coxiella burnetii|Rep: Deoxyribodipyrimidine
photolyase-class I - Coxiella burnetii
Length = 472
Score = 111 bits (266), Expect = 2e-23
Identities = 58/166 (34%), Positives = 93/166 (56%), Gaps = 1/166 (0%)
Frame = +3
Query: 30 QRRANQLQFRARGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKV 209
++ N L+ +G YP DA M +L G++H+ R VA FL + DL I W EG K
Sbjct: 302 KKNKNWLRAWQKGLTGYPIVDAGMRELWCTGYMHNRVRMIVASFLVK-DLMIDWREGEKW 360
Query: 210 FDELLLDADWSVNAGMWMWXXXXXXXXXXX-HCYCPVRFGRKTDPNGDFIRKYIPALKNM 386
F LLDAD + NA W W + P+ +K DP+G +I+++IP L +
Sbjct: 361 FWNTLLDADLANNALGWQWIAGCGPDAAPYFRIFNPILQSKKFDPDGTYIKRWIPELAKV 420
Query: 387 PTRYIHEPWMAPESVQAAAQCSIGRDYPMPMVDHTKASQINIERIK 524
P++YIH P P+++ +++ ++G DYP P+V+H KA ++ ++ K
Sbjct: 421 PSKYIHYPADMPDNISESSKVNLGVDYPFPIVNHHKAKELALKAYK 466
>UniRef50_Q834P4 Cluster: Deoxyribodipyrimidine photolyase; n=14;
Bacilli|Rep: Deoxyribodipyrimidine photolyase -
Enterococcus faecalis (Streptococcus faecalis)
Length = 477
Score = 109 bits (263), Expect = 5e-23
Identities = 54/164 (32%), Positives = 89/164 (54%), Gaps = 4/164 (2%)
Frame = +3
Query: 63 RGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWS 242
+G+ YP DA M QL + GW+H+ R A FL + +L I W G K F ++L+D D +
Sbjct: 309 KGETGYPIIDAAMRQLNQTGWMHNRLRMITASFLVK-NLHIDWRWGEKYFQKMLIDYDAA 367
Query: 243 VNAGMWMWXXXXXXXXXXX-HCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMA 419
N G W W + P+ +K D +G FI+KY+P LK +P +YIH+P +
Sbjct: 368 NNIGGWQWAASTGTDAVPYFRIFNPIIQSKKFDNDGQFIKKYVPELKQVPQKYIHQPNLM 427
Query: 420 PESVQAAAQCSIGRDYPMPMVDHTKASQINI---ERIKQVYAQL 542
E++Q +G +YP P+VD+ + + + E K+++ ++
Sbjct: 428 NEALQTQYHVHLGENYPKPIVDYASSKKQTLFLYEASKEIHQEM 471
>UniRef50_Q42696 Cluster: CPH1; n=4; Viridiplantae|Rep: CPH1 -
Chlamydomonas reinhardtii
Length = 1008
Score = 109 bits (263), Expect = 5e-23
Identities = 56/157 (35%), Positives = 87/157 (55%), Gaps = 3/157 (1%)
Frame = +3
Query: 36 RANQLQFRA--RGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKV 209
R +Q F+A +G+ YP DA M QL GW H+ R A FL + DL + W+ G+K
Sbjct: 322 RIDQHAFKAWRQGQTGYPIVDAAMRQLWSSGWCHNRGRVVAASFLVK-DLLLPWQWGLKH 380
Query: 210 FDELLLDADWSVNAGMWMWXXXXXXXXXXXHCYCPV-RFGRKTDPNGDFIRKYIPALKNM 386
+ + +DAD +A W + + + R+ DP+G+++R+++PAL +
Sbjct: 381 YWDAQIDADLECDALGWQYVSGGMSDAHPFSYMMDLEKEARRFDPDGEYVRRWLPALSRL 440
Query: 387 PTRYIHEPWMAPESVQAAAQCSIGRDYPMPMVDHTKA 497
PT YIH PW AP SV AAA +G +YP+P++ + A
Sbjct: 441 PTEYIHAPWKAPASVLAAADVELGCNYPLPIITRSDA 477
>UniRef50_Q5FS98 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Gluconobacter oxydans|Rep: Deoxyribodipyrimidine
photolyase - Gluconobacter oxydans (Gluconobacter
suboxydans)
Length = 479
Score = 106 bits (255), Expect = 5e-22
Identities = 56/153 (36%), Positives = 82/153 (53%), Gaps = 1/153 (0%)
Frame = +3
Query: 30 QRRANQLQFRARGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKV 209
+R A L+ RG+ P DA M QL + GW+H+ +R V FLT+ L I W+EG
Sbjct: 313 RRSAADLKAWQRGQTGVPIVDAGMRQLWQTGWMHNRARMIVGSFLTK-HLLIDWKEGDAW 371
Query: 210 FDELLLDADWSVNAGMWMWXXXXXXXXXXX-HCYCPVRFGRKTDPNGDFIRKYIPALKNM 386
F + L+DAD++ NA W W + P R K DPNGD+IR+++P L+ +
Sbjct: 372 FRDTLVDADFANNAMNWQWVAGTGIEATPFFRIFNPTRQAEKFDPNGDYIRQWVPELRRL 431
Query: 387 PTRYIHEPWMAPESVQAAAQCSIGRDYPMPMVD 485
+ + EPW A + A +G+ YP P+VD
Sbjct: 432 SGKALFEPWAAKDEELEKAGVRLGKSYPRPIVD 464
>UniRef50_Q43125 Cluster: Cryptochrome-1; n=55; Streptophyta|Rep:
Cryptochrome-1 - Arabidopsis thaliana (Mouse-ear cress)
Length = 681
Score = 105 bits (251), Expect = 1e-21
Identities = 57/158 (36%), Positives = 84/158 (53%), Gaps = 1/158 (0%)
Frame = +3
Query: 63 RGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWS 242
+G+ YP DA M +L GW+H R V+ F + L + W GMK F + LLDAD
Sbjct: 336 QGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKV-LQLPWRWGMKYFWDTLLDADLE 394
Query: 243 VNAGMWMWXXXXXXXXXXXHCYCPVRF-GRKTDPNGDFIRKYIPALKNMPTRYIHEPWMA 419
+A W + +F G K DPNG+++R+++P L +PT +IH PW A
Sbjct: 395 SDALGWQYITGTLPDSREFDRIDNPQFEGYKFDPNGEYVRRWLPELSRLPTDWIHHPWNA 454
Query: 420 PESVQAAAQCSIGRDYPMPMVDHTKASQINIERIKQVY 533
PESV AA +G +YP+P+V +A E + Q++
Sbjct: 455 PESVLQAAGIELGSNYPLPIVGLDEAKARLHEALSQMW 492
>UniRef50_A3QCZ8 Cluster: Deoxyribodipyrimidine photo-lyase; n=9;
Gammaproteobacteria|Rep: Deoxyribodipyrimidine
photo-lyase - Shewanella loihica (strain BAA-1088 /
PV-4)
Length = 478
Score = 104 bits (250), Expect = 2e-21
Identities = 58/157 (36%), Positives = 83/157 (52%), Gaps = 3/157 (1%)
Frame = +3
Query: 42 NQLQFRA--RGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFD 215
N+ F+A G+ YP DA M QLR GW+H+ R VA FLT+ L + W +G + F
Sbjct: 320 NEAHFQAWCEGRTGYPIVDAAMKQLRRTGWMHNRLRMIVASFLTK-HLLVDWHKGERFFM 378
Query: 216 ELLLDADWSVNAGMWMWXXXXXXXXXXX-HCYCPVRFGRKTDPNGDFIRKYIPALKNMPT 392
+ L+D D+S N G W W + P+ +K DP G+FIRKY+P L+ +P
Sbjct: 379 QQLIDGDFSANNGGWQWAASTGCDAQPYFRIFNPITQSQKFDPRGEFIRKYLPELREVPD 438
Query: 393 RYIHEPWMAPESVQAAAQCSIGRDYPMPMVDHTKASQ 503
+ IH P + + + + I YP P+VDH A Q
Sbjct: 439 KQIHFP---HDYLASQGKAEI---YPAPIVDHKAARQ 469
>UniRef50_Q0GKU4 Cluster: Cryptochrome 1 protein; n=1; Brassica
rapa|Rep: Cryptochrome 1 protein - Brassica campestris
(Field mustard)
Length = 704
Score = 104 bits (250), Expect = 2e-21
Identities = 57/158 (36%), Positives = 83/158 (52%), Gaps = 1/158 (0%)
Frame = +3
Query: 63 RGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWS 242
+G+ YP DA M +L GW+H R V+ F + L + W GMK F + LLDAD
Sbjct: 358 QGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKV-LQLPWRWGMKYFWDTLLDADLE 416
Query: 243 VNAGMWMWXXXXXXXXXXXHCYCPVRF-GRKTDPNGDFIRKYIPALKNMPTRYIHEPWMA 419
+A W + +F G K DPNG+++R+++P L +PT +IH PW A
Sbjct: 417 SDALGWQYITGTLPDSREFDRIDNPQFEGYKFDPNGEYVRRWLPELSRLPTEWIHHPWNA 476
Query: 420 PESVQAAAQCSIGRDYPMPMVDHTKASQINIERIKQVY 533
PESV AA +G +YP P+V +A E + Q++
Sbjct: 477 PESVLQAAGIELGSNYPRPIVGLDEAKARLHEALSQMW 514
>UniRef50_Q4FL16 Cluster: Deoxyribodipyrimidine photolyase; n=4;
Bacteria|Rep: Deoxyribodipyrimidine photolyase -
Pelagibacter ubique
Length = 473
Score = 103 bits (248), Expect = 3e-21
Identities = 51/156 (32%), Positives = 79/156 (50%), Gaps = 1/156 (0%)
Frame = +3
Query: 66 GKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSV 245
G YP DA M +L E GW+H+ R VA FL + L I W EG K F L+D + +
Sbjct: 316 GMTGYPIVDAGMRELYETGWMHNRVRMIVASFLVK-HLRIHWMEGEKHFKNCLVDYNEAS 374
Query: 246 NAGMWMWXXXXXXXXXXX-HCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMAP 422
N W W + P+ G K D +G + +K++P LKNMP +++++PW
Sbjct: 375 NVAQWQWVAGCGADAAPYFRIFNPILQGEKFDKDGIYTKKWVPELKNMPNKFLYKPWELE 434
Query: 423 ESVQAAAQCSIGRDYPMPMVDHTKASQINIERIKQV 530
Q + +G +YP P++DH +A ++ K +
Sbjct: 435 TKYQEQIKVIVGINYPKPIIDHVEARNAALDAFKTI 470
>UniRef50_A1WVH9 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;
Halorhodospira halophila SL1|Rep: Deoxyribodipyrimidine
photo-lyase - Halorhodospira halophila (strain DSM 244 /
SL1) (Ectothiorhodospirahalophila (strain DSM 244 /
SL1))
Length = 477
Score = 103 bits (248), Expect = 3e-21
Identities = 50/142 (35%), Positives = 75/142 (52%), Gaps = 1/142 (0%)
Frame = +3
Query: 63 RGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWS 242
RG P DA M +L GW+H+ R V FL + +L + W+ G F + L+D D +
Sbjct: 321 RGATGIPLVDAGMRELWATGWMHNRVRMVVGSFLVK-NLRLPWQHGEAHFRDTLVDWDLA 379
Query: 243 VNAGMWMWXXXXXXXXXXX-HCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMA 419
N+ W W + PVR G + DP+GD++R ++P + +P +IH+PW A
Sbjct: 380 SNSMGWQWVSGCGADAAPYFRIFNPVRQGERFDPDGDYVRHWVPEVAGLPKSHIHQPWAA 439
Query: 420 PESVQAAAQCSIGRDYPMPMVD 485
P +A +GRDYP P+VD
Sbjct: 440 PADARARCGLHLGRDYPEPLVD 461
>UniRef50_Q86RA1 Cluster: Photolyase related protein; n=1;
Aphrocallistes vastus|Rep: Photolyase related protein -
Aphrocallistes vastus
Length = 563
Score = 102 bits (245), Expect = 7e-21
Identities = 53/165 (32%), Positives = 89/165 (53%), Gaps = 2/165 (1%)
Frame = +3
Query: 78 YPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSVNAGM 257
+P+ DA + QL+ EG++ + A+A F+T LW+SWEEG F + L+ D +++
Sbjct: 386 FPFFDAAITQLKTEGYVINEVSEALATFVTNSLLWVSWEEGQNFFSQHLICFDLAMSTHS 445
Query: 258 WMWXXXXXXXXXXXHCYC-PVRF-GRKTDPNGDFIRKYIPALKNMPTRYIHEPWMAPESV 431
W+ Y P+ F +K DPNG++I++Y+P N P +IH+P A
Sbjct: 446 WLEASGSTMVTGRQKSYQDPLLFVSKKLDPNGEYIKRYLPKFINFPIEFIHKPGNASLEA 505
Query: 432 QAAAQCSIGRDYPMPMVDHTKASQINIERIKQVYAQLARYKPQAT 566
Q AA C I DYP P+ ++ + I +R++ V+ ++ +AT
Sbjct: 506 QQAANCVIDIDYPKPLFEYECRNGICCKRLR-VFMEVVDSAAKAT 549
>UniRef50_Q0C191 Cluster: Deoxyribodipyrimidine photolyase family
protein; n=2; Alphaproteobacteria|Rep:
Deoxyribodipyrimidine photolyase family protein -
Hyphomonas neptunium (strain ATCC 15444)
Length = 485
Score = 102 bits (244), Expect = 1e-20
Identities = 51/156 (32%), Positives = 81/156 (51%), Gaps = 1/156 (0%)
Frame = +3
Query: 60 ARGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADW 239
+RG+ YP DA M +L GW+H+ R VA FLT+ L + W++G + F + L+DAD
Sbjct: 322 SRGQTGYPIVDAGMRELWHTGWMHNRVRMIVASFLTK-HLLLPWQQGEQWFWDTLVDADP 380
Query: 240 SVNAGMWMWXXXXXXXXXXX-HCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWM 416
+ N W W + P+ G+K D +G ++R + P L +P +Y+H P+
Sbjct: 381 AANPASWQWTAGSGADAAPYFRVFNPISQGQKFDEDGAYVRHWCPELAGLPDKYLHAPFE 440
Query: 417 APESVQAAAQCSIGRDYPMPMVDHTKASQINIERIK 524
A A+ +G DYP P++DH Q ++ K
Sbjct: 441 ADAQTLKRARVMLGTDYPEPIIDHPVGRQRALDAYK 476
>UniRef50_Q0APK4 Cluster: Deoxyribodipyrimidine photo-lyase; n=2;
Rhodobacterales|Rep: Deoxyribodipyrimidine photo-lyase -
Maricaulis maris (strain MCS10)
Length = 499
Score = 101 bits (241), Expect = 2e-20
Identities = 53/170 (31%), Positives = 84/170 (49%), Gaps = 1/170 (0%)
Frame = +3
Query: 63 RGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWS 242
RG+ P DA M QL GW+H+ R A FL + L + W +GM F++ L+DAD +
Sbjct: 325 RGQTGIPIVDAGMRQLWTTGWMHNRVRMITASFLIK-HLGVHWRDGMAWFEDTLVDADLN 383
Query: 243 VNAGMWMWXXXXXXXXXXX-HCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMA 419
VNA W W + PV G + DP G ++ +++P L + + +H PW
Sbjct: 384 VNAASWQWVAGSGADAAPYFRIFNPVTQGERFDPQGLYVHRWVPELTGLSGKAVHAPWTR 443
Query: 420 PESVQAAAQCSIGRDYPMPMVDHTKASQINIERIKQVYAQLARYKPQATL 569
P + AA S+G+ YP P+ D + ++ + + A+ A A+L
Sbjct: 444 PANELIAAGISLGQTYPAPVTDLKTGREQALDAYQTMKARAAETPEAASL 493
>UniRef50_A4A8B3 Cluster: Deoxyribodipyrimidine photo-lyase; n=4;
Bacteria|Rep: Deoxyribodipyrimidine photo-lyase -
Congregibacter litoralis KT71
Length = 482
Score = 101 bits (241), Expect = 2e-20
Identities = 50/157 (31%), Positives = 80/157 (50%), Gaps = 1/157 (0%)
Frame = +3
Query: 63 RGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWS 242
+G+ YP DA M +L G +H+ R VA FL + L W G F + L+DAD +
Sbjct: 319 QGQTGYPIVDAGMRELWATGTMHNRIRMVVASFLCK-HLLQHWRSGEDWFWDTLVDADMA 377
Query: 243 VNAGMWMWXXXXXXXXXXX-HCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMA 419
N W W + P+ G K D +GD++R+++P + +P +Y+H+PW A
Sbjct: 378 SNGCSWQWVAGSGADAAPYFRIFNPITQGEKFDKHGDYVRQWVPEIARLPNKYLHKPWEA 437
Query: 420 PESVQAAAQCSIGRDYPMPMVDHTKASQINIERIKQV 530
+ A +G DYP P+VDH +A Q ++ + +
Sbjct: 438 SKEALEEAGIKLGSDYPEPIVDHKEARQAALDAYEDI 474
>UniRef50_P25078 Cluster: Deoxyribodipyrimidine photo-lyase; n=43;
Gammaproteobacteria|Rep: Deoxyribodipyrimidine
photo-lyase - Salmonella typhimurium
Length = 473
Score = 101 bits (241), Expect = 2e-20
Identities = 54/157 (34%), Positives = 80/157 (50%), Gaps = 1/157 (0%)
Frame = +3
Query: 30 QRRANQLQFRARGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKV 209
Q + Q +G+ YP DA M QL GW+H+ R A FL + DL I W G +
Sbjct: 309 QENPHYFQAWQKGETGYPIVDAAMRQLNATGWMHNRLRMITASFLVK-DLLIDWRLGERY 367
Query: 210 FDELLLDADWSVNAGMWMWXXXXXXXXXXX-HCYCPVRFGRKTDPNGDFIRKYIPALKNM 386
F L+D D + N G W W + P G + D +G+FIR+++PAL+++
Sbjct: 368 FMSQLIDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGERFDRDGEFIRQWLPALRDI 427
Query: 387 PTRYIHEPWMAPESVQAAAQCSIGRDYPMPMVDHTKA 497
P + IHEPW + A + + DYP P+V+H +A
Sbjct: 428 PGKAIHEPW------RWAEKAGVVLDYPRPIVEHKQA 458
>UniRef50_Q41CV5 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Exiguobacterium sibiricum 255-15|Rep:
Deoxyribodipyrimidine photolyase - Exiguobacterium
sibiricum 255-15
Length = 451
Score = 100 bits (240), Expect = 3e-20
Identities = 58/156 (37%), Positives = 78/156 (50%), Gaps = 1/156 (0%)
Frame = +3
Query: 60 ARGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADW 239
A GK YP DA M QL GW+H+ R VA FLT+ DL + W++G + F + L+D +
Sbjct: 306 AEGKTGYPIVDAAMRQLNTTGWMHNRLRMIVASFLTK-DLLVDWQKGERYFQQKLVDYEA 364
Query: 240 SVNAGMWMW-XXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWM 416
+ N G W W + P +K D +G FIR Y+P LK++P IHEP
Sbjct: 365 ASNIGGWQWAASVGTDAVPYFRVFNPTTQSKKFDKDGTFIRTYLPELKDLPKTSIHEP-- 422
Query: 417 APESVQAAAQCSIGRDYPMPMVDHTKASQINIERIK 524
Q DYPMP+V+H A + I R K
Sbjct: 423 -------TEQQRKDYDYPMPIVEHDMARKRAIARFK 451
>UniRef50_Q116U8 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Trichodesmium erythraeum IMS101|Rep:
Deoxyribodipyrimidine photolyase - Trichodesmium
erythraeum (strain IMS101)
Length = 474
Score = 100 bits (240), Expect = 3e-20
Identities = 57/157 (36%), Positives = 84/157 (53%), Gaps = 2/157 (1%)
Frame = +3
Query: 42 NQLQFRA--RGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFD 215
N+ F+A G YP DA M QL E GW+H+ R VA FLT+ DL I+W+ G K F
Sbjct: 316 NKAHFQAWCEGNTGYPIVDAAMRQLNETGWMHNRCRMIVASFLTK-DLIINWQWGEKYFM 374
Query: 216 ELLLDADWSVNAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTR 395
+ L+D D N G W W + PV +K DP G++IR+++ L+++ T+
Sbjct: 375 QNLIDGDLCANNGGWQWSASSGMDPKPLRIFNPVSQTQKYDPEGEYIRQWVCELRSVDTQ 434
Query: 396 YIHEPWMAPESVQAAAQCSIGRDYPMPMVDHTKASQI 506
Y + + A + +IG YP+P+VDH K Q+
Sbjct: 435 Y-----LVTGKIPAEEREAIG--YPLPIVDHKKQQQL 464
>UniRef50_A6WVR6 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;
Ochrobactrum anthropi ATCC 49188|Rep:
Deoxyribodipyrimidine photo-lyase - Ochrobactrum
anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168)
Length = 484
Score = 100 bits (239), Expect = 4e-20
Identities = 51/148 (34%), Positives = 81/148 (54%), Gaps = 1/148 (0%)
Frame = +3
Query: 63 RGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWS 242
RG+ +P DA M QL GW+H+ R VA FLT+ +L I W +G + F + L+D D +
Sbjct: 328 RGQTGFPIIDAGMRQLWATGWMHNRVRMLVASFLTK-NLLIDWRKGEEWFWDTLVDGDIA 386
Query: 243 VNAGMWMWXXXXXXXXXXX-HCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMA 419
N G W W + P+ G K D G ++R ++P L + +++H+P+ A
Sbjct: 387 SNPGSWQWVAGCGMDAAPYFRVFNPILQGEKFDAEGQYVRHWVPELSGLSNKWLHKPFEA 446
Query: 420 PESVQAAAQCSIGRDYPMPMVDHTKASQ 503
P+ V +A ++G YP P++D +ASQ
Sbjct: 447 PKDVLTSAGIALGSTYPKPIID-LQASQ 473
>UniRef50_A0L6R4 Cluster: Deoxyribodipyrimidine photo-lyase; n=4;
Proteobacteria|Rep: Deoxyribodipyrimidine photo-lyase -
Magnetococcus sp. (strain MC-1)
Length = 476
Score = 100 bits (239), Expect = 4e-20
Identities = 49/141 (34%), Positives = 75/141 (53%), Gaps = 1/141 (0%)
Frame = +3
Query: 66 GKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSV 245
G+ P DA M +L + G +H+ R V FL + +L + W G F + L+D D ++
Sbjct: 320 GQTGIPIVDAGMRELWQTGVMHNRVRMLVGSFLVK-NLLLDWRAGAAWFKDCLVDYDLAI 378
Query: 246 NAGMWMWXXXXXXXXXXX-HCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMAP 422
N+ W W + PV G K D NG + R+++P L N+P +Y+ +PWMAP
Sbjct: 379 NSASWQWVAGCGADAAPYFRIFNPVTQGEKFDRNGTYTRRFVPELANLPDQYLFKPWMAP 438
Query: 423 ESVQAAAQCSIGRDYPMPMVD 485
S+ A +G+DYP P+VD
Sbjct: 439 ASILRQAGVRLGQDYPEPLVD 459
>UniRef50_Q39EN4 Cluster: Deoxyribodipyrimidine photolyase; n=42;
Bacteria|Rep: Deoxyribodipyrimidine photolyase -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 518
Score = 99.5 bits (237), Expect = 7e-20
Identities = 53/146 (36%), Positives = 74/146 (50%), Gaps = 1/146 (0%)
Frame = +3
Query: 63 RGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWS 242
RG+ YP DA + +L GW+H+ R VA FL + L I W G F + L+DAD +
Sbjct: 359 RGRTGYPLVDAGLRELWTTGWMHNRVRMVVASFLIK-HLLIDWRAGEAWFWDTLVDADPA 417
Query: 243 VNAGMWMWXXXXXXXXXXX-HCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMA 419
NA W W + PV G+K DP+G ++R+++P L + IH PW A
Sbjct: 418 NNAASWQWVAGCGADAAPYFRIFNPVAQGQKFDPDGAYVRRWVPELAGLDNASIHAPWEA 477
Query: 420 PESVQAAAQCSIGRDYPMPMVDHTKA 497
AA +G DYP P+V+H A
Sbjct: 478 SPLELDAAGVRLGVDYPAPLVEHAAA 503
>UniRef50_Q3VTE5 Cluster: Deoxyribodipyrimidine photolyase; n=3;
Bacteria|Rep: Deoxyribodipyrimidine photolyase -
Prosthecochloris aestuarii DSM 271
Length = 477
Score = 99.5 bits (237), Expect = 7e-20
Identities = 53/167 (31%), Positives = 85/167 (50%), Gaps = 1/167 (0%)
Frame = +3
Query: 63 RGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWS 242
+G YP DA M +L + G++H+ R FL + +L + W G + F + LLDAD +
Sbjct: 314 QGMTGYPLVDAGMRELWQTGYMHNRVRMITGSFLVK-NLLLHWHYGQQWFHDCLLDADLA 372
Query: 243 VNAGMWMWXXXXXXXXXXX-HCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMA 419
N+ W W + PVR G K DP+G + +++P L +P +Y+ PW A
Sbjct: 373 NNSAGWQWIAGCGVDAAPYFRVFNPVRQGEKFDPDGTYTLRFVPELAKLPKKYLFNPWEA 432
Query: 420 PESVQAAAQCSIGRDYPMPMVDHTKASQINIERIKQVYAQLARYKPQ 560
P+++ A ++G+ YP P+VD I+ R YA + + K Q
Sbjct: 433 PKNILQEAGITLGKTYPEPIVD----LAISRNRALSAYASIRKKKIQ 475
>UniRef50_Q6EAM9 Cluster: Cryptochrome 2A apoprotein; n=4;
rosids|Rep: Cryptochrome 2A apoprotein - Pisum sativum
(Garden pea)
Length = 629
Score = 97.9 bits (233), Expect = 2e-19
Identities = 51/142 (35%), Positives = 76/142 (53%), Gaps = 1/142 (0%)
Frame = +3
Query: 63 RGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWS 242
+G+ YP DA M +L GW+H+ R V+ F + L + W+ GMK F + LLDAD
Sbjct: 329 QGRTGYPLVDAGMRELWATGWMHNRIRVIVSSFAVKM-LLLPWKWGMKYFWDTLLDADLE 387
Query: 243 VNAGMWMWXXXXXXXXXXXHCYC-PVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMA 419
+ W + P G K DP G+++R+++P L MPT +IH PW A
Sbjct: 388 CDILGWQYISGCLPDGHELERLDDPEILGAKFDPEGEYVRQWLPELARMPTEWIHHPWNA 447
Query: 420 PESVQAAAQCSIGRDYPMPMVD 485
P SV A+ +G++YP P++D
Sbjct: 448 PLSVLRASGVELGQNYPNPIID 469
>UniRef50_Q0VRI4 Cluster: DNA photolyase; n=1; Alcanivorax
borkumensis SK2|Rep: DNA photolyase - Alcanivorax
borkumensis (strain SK2 / ATCC 700651 / DSM 11573)
Length = 484
Score = 96.7 bits (230), Expect = 5e-19
Identities = 50/142 (35%), Positives = 71/142 (50%), Gaps = 1/142 (0%)
Frame = +3
Query: 66 GKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSV 245
G+ YP DA M QL GW+H+ R A FL++ LW+ W G F L+D D++
Sbjct: 331 GRTGYPLVDAAMRQLVATGWMHNRLRMVTAMFLSK-HLWLDWRRGEAFFMTHLIDGDFAA 389
Query: 246 NAGMWMWXXXXXXXXXXX-HCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMAP 422
N G W W + PVR G++ D G FI ++P L+++ ++ IHEPW P
Sbjct: 390 NNGGWQWSASSGTDAVPYFRVFNPVRQGQRFDSEGRFIAHWVPQLRDLDSKQIHEPWKQP 449
Query: 423 ESVQAAAQCSIGRDYPMPMVDH 488
+ RDYP P+V H
Sbjct: 450 ---------LLARDYPPPVVPH 462
>UniRef50_UPI0000E87D35 Cluster: deoxyribodipyrimidine photo-lyase;
n=1; Methylophilales bacterium HTCC2181|Rep:
deoxyribodipyrimidine photo-lyase - Methylophilales
bacterium HTCC2181
Length = 465
Score = 96.3 bits (229), Expect = 6e-19
Identities = 51/142 (35%), Positives = 70/142 (49%), Gaps = 1/142 (0%)
Frame = +3
Query: 66 GKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSV 245
G+ +P DA M QL + G++H+ R VA FL + DL I W G F E L+D D+S
Sbjct: 311 GRTGFPIIDAAMHQLNKTGFMHNRLRMIVASFLVK-DLLIDWRWGESYFAEKLIDFDFSA 369
Query: 246 NAGMWMWXXXXXXXXXXX-HCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMAP 422
N G W W + P+ K DP G FI+KY+P L + + IH P
Sbjct: 370 NNGGWQWAASTGCDAQPWFRIFNPLLQSEKFDPEGLFIKKYLPQLTPLSAKEIHRPHFFY 429
Query: 423 ESVQAAAQCSIGRDYPMPMVDH 488
E + +G DYP P++DH
Sbjct: 430 EKDPDTFKVKLGEDYPFPIIDH 451
>UniRef50_A4SQP9 Cluster: Deoxyribodipyrimidine photolyase; n=2;
Aeromonas|Rep: Deoxyribodipyrimidine photolyase -
Aeromonas salmonicida (strain A449)
Length = 473
Score = 95.5 bits (227), Expect = 1e-18
Identities = 56/158 (35%), Positives = 75/158 (47%), Gaps = 3/158 (1%)
Frame = +3
Query: 66 GKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSV 245
G+ YP DA M L GW+H+ R VA FLT+ DL I W G F L+D D +
Sbjct: 324 GRTGYPIVDAAMRCLHATGWMHNRLRMIVASFLTK-DLHIHWRLGEDYFMSQLIDGDLAA 382
Query: 246 NAGMWMWXXXXXXXXXXX-HCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEP--WM 416
N G W W + P G++ DP GDFIR ++ L ++P Y+H+P W+
Sbjct: 383 NNGGWQWAAGTGADAAPYFRVFNPTTQGQRFDPQGDFIRTWVTELADIPAAYVHQPHDWL 442
Query: 417 APESVQAAAQCSIGRDYPMPMVDHTKASQINIERIKQV 530
+ GR YP PMVDH A IE + +
Sbjct: 443 RLKG---------GRGYPAPMVDHALARVKAIEMFRNL 471
>UniRef50_P12768 Cluster: Deoxyribodipyrimidine photo-lyase; n=6;
Actinomycetales|Rep: Deoxyribodipyrimidine photo-lyase -
Streptomyces griseus
Length = 455
Score = 95.5 bits (227), Expect = 1e-18
Identities = 53/153 (34%), Positives = 76/153 (49%)
Frame = +3
Query: 39 ANQLQFRARGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDE 218
A+++ G YP DA M QL EGW+H+ +R A FLT+ L++ W EG + F +
Sbjct: 299 ADEMHAWKSGLTGYPLVDAAMRQLAHEGWMHNRARMLAASFLTK-TLYVDWREGARHFLD 357
Query: 219 LLLDADWSVNAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRY 398
LL+D D + N W W PV G++ D GD++R ++P L +
Sbjct: 358 LLVDGDVANNQLNWQWVAGTGTDTRPNRVLNPVIQGKRFDARGDYVRGWVPELAEVEGSA 417
Query: 399 IHEPWMAPESVQAAAQCSIGRDYPMPMVDHTKA 497
IHEPW +A G DYP P+VD +A
Sbjct: 418 IHEPWKLQGLDRA------GLDYPDPVVDLAEA 444
>UniRef50_Q5ZYZ9 Cluster: Deoxyribodipyrimidine photolyase; n=4;
Legionella pneumophila|Rep: Deoxyribodipyrimidine
photolyase - Legionella pneumophila subsp. pneumophila
(strain Philadelphia 1 /ATCC 33152 / DSM 7513)
Length = 471
Score = 94.7 bits (225), Expect = 2e-18
Identities = 51/157 (32%), Positives = 83/157 (52%), Gaps = 1/157 (0%)
Frame = +3
Query: 63 RGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWS 242
+G YP DA M +L G++H+ R VA FLT+ DL I W G + F + L+DAD +
Sbjct: 315 KGMTGYPIIDAGMRELWATGYMHNRVRMIVASFLTK-DLLIDWRSGAQWFLDTLVDADLA 373
Query: 243 VNAGMWMWXXXXXXXXXXX-HCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMA 419
N+ W W + P+ +K DP+G +IR++IP L + ++ IH+PW
Sbjct: 374 NNSASWQWVAGCGADAAPYFRIFNPILQSQKFDPDGVYIRQWIPELAQLNSQSIHQPWTD 433
Query: 420 PESVQAAAQCSIGRDYPMPMVDHTKASQINIERIKQV 530
+ A+ +G+ YP P++DH +A + +Q+
Sbjct: 434 AD----ASSIFLGKKYPKPIIDHQEARTKALSYYQQI 466
>UniRef50_Q0BXN5 Cluster: Deoxyribodipyrimidine photolyase family
protein; n=2; Rhodobacterales|Rep: Deoxyribodipyrimidine
photolyase family protein - Hyphomonas neptunium (strain
ATCC 15444)
Length = 536
Score = 94.3 bits (224), Expect = 3e-18
Identities = 49/152 (32%), Positives = 77/152 (50%)
Frame = +3
Query: 66 GKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSV 245
G+ +P+ DA M LRE GW++ R V F + LW+ W++ + L D + +
Sbjct: 323 GRTGFPFLDACMRSLRETGWLNFRMRAMVMGFASH-HLWLDWKQPAEHLAALFTDFEPGI 381
Query: 246 NAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMAPE 425
+ Y PV+ + DP+G FIR+++P L +P ++H PW AP
Sbjct: 382 HYPQAQMQSATTGMNTP-RIYNPVKQSQDQDPDGAFIRRWVPELSGLPAEWLHAPWEAPA 440
Query: 426 SVQAAAQCSIGRDYPMPMVDHTKASQINIERI 521
SV+A A +G+ YPM +VDH A++ RI
Sbjct: 441 SVRARAGIVLGQTYPMRIVDHMAAAEEARSRI 472
>UniRef50_Q8EBW1 Cluster: Deoxyribodipyrimidine photolyase; n=7;
Shewanella|Rep: Deoxyribodipyrimidine photolyase -
Shewanella oneidensis
Length = 512
Score = 93.9 bits (223), Expect = 3e-18
Identities = 57/158 (36%), Positives = 77/158 (48%), Gaps = 4/158 (2%)
Frame = +3
Query: 36 RANQLQFRA--RGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKV 209
R NQ +F A GK YP DA M QL + GW+H+ R VA FLT+ L I W G +
Sbjct: 342 RNNQSEFLAWCEGKTGYPIVDAAMRQLNQTGWMHNRLRMVVASFLTK-HLLIDWRWGERY 400
Query: 210 FDELLLDADWSVNAGMWMW-XXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNM 386
F + L+D D + N G W W + P+ K DP+G FIRKY+P L +
Sbjct: 401 FRQHLIDGDLAANNGGWQWSAGCGCDAQPYFRIFNPMSQSEKFDPDGRFIRKYLPELASW 460
Query: 387 PTRYIHEP-WMAPESVQAAAQCSIGRDYPMPMVDHTKA 497
+H+P S+ A + DYP +V+H A
Sbjct: 461 GVTRLHQPNQQKMPSLFEAPLFASQADYPNAIVEHNAA 498
>UniRef50_A3D723 Cluster: Deoxyribodipyrimidine photo-lyase; n=8;
Alteromonadales|Rep: Deoxyribodipyrimidine photo-lyase -
Shewanella baltica OS155
Length = 505
Score = 93.5 bits (222), Expect = 4e-18
Identities = 56/160 (35%), Positives = 79/160 (49%), Gaps = 4/160 (2%)
Frame = +3
Query: 30 QRRANQLQFRA--RGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGM 203
Q R N +F A G+ YP DA M QL + GW+H+ R VA FLT+ L I W G
Sbjct: 330 QWRNNPQEFAAWCEGRTGYPIVDAAMRQLNQTGWMHNRLRMVVASFLTK-HLLIDWRWGE 388
Query: 204 KVFDELLLDADWSVNAGMWMW-XXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALK 380
+ F + L+D D + N G W W + P+ K DP+G FIRKY+P L
Sbjct: 389 RYFRQKLIDGDLAANNGGWQWSAGCGCDAQPYFRIFNPMSQSEKFDPDGSFIRKYLPELA 448
Query: 381 NMPTRYIHEPWMA-PESVQAAAQCSIGRDYPMPMVDHTKA 497
+ + +H+P A S+ +I YP +V+H+ A
Sbjct: 449 SWGIKQLHQPSTAQTPSLFEQPLFNIKTAYPSAIVEHSAA 488
>UniRef50_A6GPG1 Cluster: Deoxyribodipyrimidine photolyase family
protein; n=1; Limnobacter sp. MED105|Rep:
Deoxyribodipyrimidine photolyase family protein -
Limnobacter sp. MED105
Length = 559
Score = 92.7 bits (220), Expect = 8e-18
Identities = 52/175 (29%), Positives = 79/175 (45%), Gaps = 3/175 (1%)
Frame = +3
Query: 12 NCGELTQRRANQLQFRARGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISW 191
N EL+ + G+ +P DA M LR GW++ R + F + LW+ W
Sbjct: 336 NFAELSPEENQKALAWIEGRTGFPMVDACMRMLRATGWVNFRMRAMLVAFASY-QLWLDW 394
Query: 192 EEGMKVFDELLLDADWSVNAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIP 371
+ LD + ++ + Y PV+ + DP G FIR++IP
Sbjct: 395 RHTAPMLAREFLDYEPGIHYPQFQMQSGVTGINTL-RIYNPVKQAKDHDPQGVFIRRWIP 453
Query: 372 ALKNMPTRYIHEPWMAPESVQAAAQCSIGRDYPMPMVDHTKA---SQINIERIKQ 527
LKN+P +I EPW P+ +Q C +G DYP P+VD A ++ NI +Q
Sbjct: 454 ELKNIPDPWIGEPWNTPQLIQQECGCIVGEDYPWPVVDPDTAISKARSNITEFRQ 508
>UniRef50_A4TUK0 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;
Magnetospirillum gryphiswaldense|Rep:
Deoxyribodipyrimidine photo-lyase - Magnetospirillum
gryphiswaldense
Length = 457
Score = 92.7 bits (220), Expect = 8e-18
Identities = 51/145 (35%), Positives = 73/145 (50%), Gaps = 1/145 (0%)
Frame = +3
Query: 66 GKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSV 245
G+ YP DA + QL + GW+H+ R VA FL + DL I W+ G F + L+DAD +
Sbjct: 303 GRTGYPIIDAGLRQLWQTGWMHNRVRMIVASFLIK-DLLIPWQAGEAWFWDTLVDADSAN 361
Query: 246 NAGMWMWXXXXXXXXXXX-HCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMAP 422
NA W W + PV G K DP+G ++R ++P L ++P ++H+PW
Sbjct: 362 NAASWQWVAGSGADAAPFFRIFNPVTQGEKFDPDGTYVRTWVPELAHLPKAFVHQPW--- 418
Query: 423 ESVQAAAQCSIGRDYPMPMVDHTKA 497
+ YP PMVDH A
Sbjct: 419 -------KMGRAPGYPPPMVDHALA 436
>UniRef50_Q9RIY2 Cluster: Deoxiribopirymidine photolyase; n=1;
Streptomyces coelicolor|Rep: Deoxiribopirymidine
photolyase - Streptomyces coelicolor
Length = 415
Score = 92.3 bits (219), Expect = 1e-17
Identities = 49/143 (34%), Positives = 77/143 (53%)
Frame = +3
Query: 57 RARGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDAD 236
R G+ YP DA M QLR +GW+H+ +R VA FLT+ L++ W G + F +LL+D D
Sbjct: 265 RLAGRTGYPVVDAAMRQLRHQGWMHNRARLLVASFLTK-TLYVDWRIGARHFLDLLVDGD 323
Query: 237 WSVNAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWM 416
N W W P+ R+ DP+G ++R+++P L+++ +HEPW
Sbjct: 324 VVNNQLNWQWAAGTGTDTRPHRVLNPLVQARRFDPDGVYVRRWVPELRSVEGGKVHEPW- 382
Query: 417 APESVQAAAQCSIGRDYPMPMVD 485
+ AA + + DYP P+V+
Sbjct: 383 ---RLAAAERGEL--DYPDPLVE 400
>UniRef50_Q2JW81 Cluster: Deoxyribodipyrimidine photolyase; n=2;
Cyanobacteria|Rep: Deoxyribodipyrimidine photolyase -
Synechococcus sp. (strain JA-3-3Ab) (Cyanobacteria
bacteriumYellowstone A-Prime)
Length = 479
Score = 92.3 bits (219), Expect = 1e-17
Identities = 57/169 (33%), Positives = 79/169 (46%), Gaps = 1/169 (0%)
Frame = +3
Query: 36 RANQLQFRARGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFD 215
R + Q G+ YP DA M QL E GW+H+ R VA FLT+ DL I W G + F
Sbjct: 309 RQDWFQAWCAGQTGYPIVDAAMRQLNETGWMHNRCRMIVASFLTK-DLLIDWRWGERYFM 367
Query: 216 ELLLDADWSVNAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTR 395
+ L+D D + N G W W + P + DP G++IR+Y+P L + T
Sbjct: 368 QKLVDGDLAANNGGWQWSAGVGTDPRPLRIFNPATQAARYDPEGEYIRRYLPELAGLDTP 427
Query: 396 YIHEPWMAPESVQAAAQCSIGR-DYPMPMVDHTKASQINIERIKQVYAQ 539
+ W+ + + A R YP P+VDH K Q +R Q Q
Sbjct: 428 AL--LWVGDDPKGSWALQERRRCGYPDPIVDH-KVQQQEFKRRYQAVQQ 473
>UniRef50_P57386 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;
Buchnera aphidicola (Acyrthosiphon pisum)|Rep:
Deoxyribodipyrimidine photo-lyase - Buchnera aphidicola
subsp. Acyrthosiphon pisum (Acyrthosiphon pisumsymbiotic
bacterium)
Length = 483
Score = 92.3 bits (219), Expect = 1e-17
Identities = 50/160 (31%), Positives = 85/160 (53%), Gaps = 1/160 (0%)
Frame = +3
Query: 66 GKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSV 245
G +P DA M QL E GW+H+ R + FL + +L I+W EG + F L+D D ++
Sbjct: 323 GNTGFPIIDAGMRQLNELGWMHNRLRMITSSFLVK-NLLINWREGEEHFISNLIDGDLAL 381
Query: 246 NAGMWMWXXXXXXXXXXX-HCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMAP 422
N G W W + P+ + D +G+FI+K+IP LKN+P +IH+P
Sbjct: 382 NNGGWQWSASVGCDSVPYIRIFNPLHQSKTFDESGNFIKKFIPELKNVPNHHIHQPH--- 438
Query: 423 ESVQAAAQCSIGRDYPMPMVDHTKASQINIERIKQVYAQL 542
+ + Q + DYP P+++++++ + ++ KQ +L
Sbjct: 439 ---EWSKQKNFKIDYPNPIINYSESRKTSLSLFKQARLKL 475
>UniRef50_Q712D5 Cluster: Cryptochrome 2; n=7; Oryza sativa|Rep:
Cryptochrome 2 - Oryza sativa (Rice)
Length = 651
Score = 91.9 bits (218), Expect = 1e-17
Identities = 58/176 (32%), Positives = 85/176 (48%), Gaps = 1/176 (0%)
Frame = +3
Query: 63 RGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWS 242
+G YP DA M +L GW H+ R ++ F + L I W GMK F ++LLDAD
Sbjct: 333 QGMTGYPLVDAGMRELWATGWTHNRIRVIISSFAVKF-LLIPWTWGMKYFWDVLLDADLE 391
Query: 243 VNAGMWMWXXXXXXXXXXX-HCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMA 419
+ W + P G+K DP+G ++R +IP L MPT +IH PW A
Sbjct: 392 SDILGWQYISGSLPDGHELSRLDNPEVQGQKYDPDGVYVRTWIPELARMPTEWIHHPWDA 451
Query: 420 PESVQAAAQCSIGRDYPMPMVDHTKASQINIERIKQVYAQLARYKPQATLNANAVQ 587
P + A +G +YP P+VD A + + I ++ QL + A L+ V+
Sbjct: 452 PSCILEVAGVELGFNYPKPIVDLHIARECLDDSISTMW-QLDTAEKLAELDGEVVE 506
>UniRef50_Q5QV18 Cluster: Deoxyribodipyrimidine photolyase; n=2;
Idiomarina|Rep: Deoxyribodipyrimidine photolyase -
Idiomarina loihiensis
Length = 468
Score = 91.5 bits (217), Expect = 2e-17
Identities = 54/158 (34%), Positives = 77/158 (48%), Gaps = 3/158 (1%)
Frame = +3
Query: 66 GKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSV 245
G+ YP DA M QL GW+H+ R A FL + DL + W +G F + L+D +
Sbjct: 318 GRTGYPIVDAGMRQLTSTGWMHNRLRMITANFLVK-DLLVDWRKGEAFFMQHLIDGSFPA 376
Query: 246 NAGMWMWXXXXXXXXXXX-HCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEP--WM 416
N G W W + PV+ K DP+G +IRK++ LK +PT+YIH P W+
Sbjct: 377 NNGGWQWSASVGTDAVPYFRVFNPVKQSEKFDPDGQYIRKWVEELKEVPTKYIHWPHSWL 436
Query: 417 APESVQAAAQCSIGRDYPMPMVDHTKASQINIERIKQV 530
+S +Y PMV+H A + + KQV
Sbjct: 437 QQQS---------SNNYCDPMVEHKFARERFLTTFKQV 465
>UniRef50_A7D5J0 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;
Halorubrum lacusprofundi ATCC 49239|Rep:
Deoxyribodipyrimidine photo-lyase - Halorubrum
lacusprofundi ATCC 49239
Length = 514
Score = 91.1 bits (216), Expect = 2e-17
Identities = 51/145 (35%), Positives = 75/145 (51%), Gaps = 1/145 (0%)
Frame = +3
Query: 63 RGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWS 242
RG+ YP DA M QLREE ++H+ R VA FLT+ DL W G F E L D D +
Sbjct: 356 RGETGYPIVDAGMRQLREEAFMHNRVRMIVASFLTK-DLLADWRHGYDYFRETLADHDTA 414
Query: 243 VNAGMWMW-XXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMA 419
++G W W + P+ G + DP+ ++I++Y+P L+ + IHE W
Sbjct: 415 NDSGGWQWAASTGTDAQPYFRIFNPMTQGERYDPDAEYIKRYVPELRGLDADLIHE-WHE 473
Query: 420 PESVQAAAQCSIGRDYPMPMVDHTK 494
Q A + +YP P+VDH++
Sbjct: 474 LSPTQRA---NAAPNYPAPIVDHSE 495
>UniRef50_Q2S050 Cluster: Deoxyribodipyrimidine photolyase,
putative; n=1; Salinibacter ruber DSM 13855|Rep:
Deoxyribodipyrimidine photolyase, putative -
Salinibacter ruber (strain DSM 13855)
Length = 537
Score = 89.8 bits (213), Expect = 6e-17
Identities = 47/145 (32%), Positives = 70/145 (48%), Gaps = 1/145 (0%)
Frame = +3
Query: 66 GKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSV 245
G+ +P DA M LR GW++ R A+ C D W+ W + L+ D +
Sbjct: 363 GRTGFPMVDACMRHLRATGWLNFRMR-AMLCSFAAYDCWLDWRRFAPTYGGLMADYVPGI 421
Query: 246 NAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTR-YIHEPWMAP 422
+ + Y PV+ G++ DP+G FIR+++P L ++ T Y+H PW
Sbjct: 422 HYPQ-VQMQSGTTGINRVRIYNPVKQGKEQDPDGTFIRRWVPELSHLDTTAYVHAPWKMS 480
Query: 423 ESVQAAAQCSIGRDYPMPMVDHTKA 497
Q AA C IG+DYP +VDH A
Sbjct: 481 PIEQQAAGCVIGKDYPERVVDHNDA 505
>UniRef50_A7SYS9 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 524
Score = 89.0 bits (211), Expect = 1e-16
Identities = 46/139 (33%), Positives = 69/139 (49%)
Frame = +3
Query: 66 GKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSV 245
GK P+ DA M +L+E GW+ + R VA FL + DL + W G + F+ LLLD D
Sbjct: 344 GKTGVPFVDANMRELKETGWMSNRGRQNVASFLIK-DLGLDWRYGAEWFESLLLDHDVCS 402
Query: 246 NAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMAPE 425
N G W + + V+ G DP+GD+I+ ++P L +P +H PW
Sbjct: 403 NYGNWNYAAGIGNDPREGRKFNMVKQGLDYDPDGDYIKTWVPELAKIPGAKVHVPWTLKP 462
Query: 426 SVQAAAQCSIGRDYPMPMV 482
++ +G YP P+V
Sbjct: 463 GELRSSGVELGVTYPNPIV 481
>UniRef50_Q6FCZ9 Cluster: Deoxyribodipyrimidine photolyase
(Photoreactivation), FAD-binding; n=2;
Acinetobacter|Rep: Deoxyribodipyrimidine photolyase
(Photoreactivation), FAD-binding - Acinetobacter sp.
(strain ADP1)
Length = 477
Score = 88.2 bits (209), Expect = 2e-16
Identities = 55/157 (35%), Positives = 84/157 (53%), Gaps = 2/157 (1%)
Frame = +3
Query: 63 RGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWS 242
+GK P DA M QL+ GW+H+ R A FL++ +L I W +G K F + L+D D +
Sbjct: 327 QGKTGIPIVDAGMRQLKATGWMHNRVRMICAMFLSK-NLLIDWRKGEKWFMQHLIDGDLA 385
Query: 243 VNAGMWMWXXXXXXXXXXX-HCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMA 419
N G W W + PV +K DP G F++K+IP LK++ +++IH+P+
Sbjct: 386 ANDGGWQWSASTGTDASPYFRIFNPVTQSQKFDPEGVFLKKWIPELKHLDSKHIHDPY-- 443
Query: 420 PESVQAAAQCSIGRDYPMPMVDHTKASQIN-IERIKQ 527
A Q +YP P++D KA++ N IE K+
Sbjct: 444 ------AYQHKTELNYPKPIID-LKATRKNAIEVFKK 473
>UniRef50_A3ETQ4 Cluster: Deoxyribodipyrimidine photolyase; n=2;
Bacteria|Rep: Deoxyribodipyrimidine photolyase -
Leptospirillum sp. Group II UBA
Length = 536
Score = 87.8 bits (208), Expect = 2e-16
Identities = 51/144 (35%), Positives = 73/144 (50%), Gaps = 3/144 (2%)
Frame = +3
Query: 63 RGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWS 242
+G+ P DA M QLR G++ + R FL + +L I W +G + F + L+D D +
Sbjct: 373 KGRTGIPLVDAGMRQLRRLGFLPNRVRMVAGSFLVK-NLLIDWRKGREWFSDNLVDHDPA 431
Query: 243 VNAGMWMWXXXXXXXXXXX-HCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMA 419
NA W W + PV G K DP G +++ Y+P L +P RY+H PW A
Sbjct: 432 NNAASWQWISGYGADAAPWFRIFNPVLQGEKFDPEGRYVKTYLPELARIPPRYLHCPWTA 491
Query: 420 PESVQAAAQCSIGRDYPM--PMVD 485
P S+ A IG+D P P+VD
Sbjct: 492 PSSLLDNA--GIGKDSPYRNPIVD 513
>UniRef50_A0Q6Z2 Cluster: Deoxyribodipyrimidine photolyase; n=6;
Francisella tularensis|Rep: Deoxyribodipyrimidine
photolyase - Francisella tularensis subsp. novicida
(strain U112)
Length = 464
Score = 87.8 bits (208), Expect = 2e-16
Identities = 52/157 (33%), Positives = 81/157 (51%), Gaps = 1/157 (0%)
Frame = +3
Query: 63 RGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWS 242
+G+ P DA M +L + G++H+ R VA FL + L I W+ G K F + L DAD++
Sbjct: 309 KGQTGIPIVDAGMRELWQTGYMHNRVRMIVASFLIKNCL-IHWKYGEKWFFDTLFDADFA 367
Query: 243 VNAGMWMWXXXXXXXXXXX-HCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMA 419
N W W + PV K + ++IRKY+P LK +P + I +PW A
Sbjct: 368 SNNANWQWVAGCGLDAAPYFRIFNPVLQAEKFEAY-EYIRKYVPELKLLPNKLIAKPWEA 426
Query: 420 PESVQAAAQCSIGRDYPMPMVDHTKASQINIERIKQV 530
E V A ++G++YP P+VD K+ ++ Q+
Sbjct: 427 SELVLQEAGITLGQNYPKPIVDLKKSRDRALQLHNQI 463
>UniRef50_Q087D0 Cluster: Deoxyribodipyrimidine photo-lyase; n=3;
Alteromonadales|Rep: Deoxyribodipyrimidine photo-lyase -
Shewanella frigidimarina (strain NCIMB 400)
Length = 504
Score = 87.4 bits (207), Expect = 3e-16
Identities = 51/158 (32%), Positives = 75/158 (47%)
Frame = +3
Query: 48 LQFRARGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLL 227
+Q A G+ P DA M L+E G+I+ R + F+T L I+W+ L
Sbjct: 315 IQRWADGQTGIPIIDACMRCLKETGYINFRMRAMLVSFVTH-HLNIAWQHASLPLANYFL 373
Query: 228 DADWSVNAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHE 407
D + ++ + Y PV+ + DP G+FIR + P L N+P YIH+
Sbjct: 374 DFEPGIHYPQ-LQMQASVTGINTIRLYNPVKQSQDQDPRGEFIRLWCPELTNLPNEYIHQ 432
Query: 408 PWMAPESVQAAAQCSIGRDYPMPMVDHTKASQINIERI 521
PW P +GRDYP PM+D T+ASQ +R+
Sbjct: 433 PWQQPPMEAIFNDIILGRDYPEPMIDLTQASQTARDRL 470
>UniRef50_A7HMU7 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;
Fervidobacterium nodosum Rt17-B1|Rep:
Deoxyribodipyrimidine photo-lyase - Fervidobacterium
nodosum Rt17-B1
Length = 436
Score = 87.4 bits (207), Expect = 3e-16
Identities = 46/111 (41%), Positives = 58/111 (52%)
Frame = +3
Query: 78 YPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSVNAGM 257
YP DA + QL++E W+H+ R VA FL + DL I W G K F E LLD D +N G
Sbjct: 297 YPIVDAGIRQLKQENWMHNRVRLIVANFLVK-DLLIDWRIGEKFFREYLLDYDEVLNVGN 355
Query: 258 WMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEP 410
W W + P+ K DPN ++I+KYIP LKN IH P
Sbjct: 356 WQWSASVGPDPKPLRIFNPMIQSEKFDPNCEYIKKYIPELKNEENYKIHNP 406
>UniRef50_Q3W0H9 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Frankia sp. EAN1pec|Rep: Deoxyribodipyrimidine
photolyase - Frankia sp. EAN1pec
Length = 409
Score = 87.0 bits (206), Expect = 4e-16
Identities = 50/152 (32%), Positives = 73/152 (48%), Gaps = 1/152 (0%)
Frame = +3
Query: 66 GKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSV 245
G+ YP DA M QL EGW+H+ R A F+ + DL + G + + E L+D D +
Sbjct: 259 GRTGYPIVDAGMRQLLAEGWVHNRVRMIEASFVCK-DLNVHRTHGARWYLERLVDGDLAS 317
Query: 246 NAGMWMWXXXXXXXXXXX-HCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMAP 422
N W W + PV GRK DP G++IR+++P L+ +P +HEPW P
Sbjct: 318 NNHGWQWTAGTGTDAAPYFRVFNPVSQGRKFDPAGEYIRRWVPELRGLPPDAVHEPWKLP 377
Query: 423 ESVQAAAQCSIGRDYPMPMVDHTKASQINIER 518
YP P+VDH + ++R
Sbjct: 378 AGPP--------NGYPRPVVDHAVERREALDR 401
>UniRef50_A7D4K1 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;
Halorubrum lacusprofundi ATCC 49239|Rep:
Deoxyribodipyrimidine photo-lyase - Halorubrum
lacusprofundi ATCC 49239
Length = 498
Score = 87.0 bits (206), Expect = 4e-16
Identities = 50/159 (31%), Positives = 78/159 (49%)
Frame = +3
Query: 63 RGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWS 242
RG+ YP DA M QL EG++H+ R VA FLT+ L I W G + F L+D D +
Sbjct: 344 RGETGYPLVDAGMRQLNAEGYVHNRPRQVVASFLTK-HLLIDWRRGARYFTTQLIDHDHA 402
Query: 243 VNAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMAP 422
N G W W + PV K D + F+++Y+P L+++P I + W
Sbjct: 403 SNHGAWQWTASTGTDSVDVRIFDPVAQMAKYDADATFVKEYVPELRDVPAEEIVD-WPTL 461
Query: 423 ESVQAAAQCSIGRDYPMPMVDHTKASQINIERIKQVYAQ 539
V+ ++ +YP P+VD + ER ++V+ +
Sbjct: 462 SRVERE---TLAPEYPHPIVDRNE----GYERAQRVFEE 493
>UniRef50_Q2SQU0 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Hahella chejuensis KCTC 2396|Rep: Deoxyribodipyrimidine
photolyase - Hahella chejuensis (strain KCTC 2396)
Length = 491
Score = 85.8 bits (203), Expect = 9e-16
Identities = 51/169 (30%), Positives = 79/169 (46%), Gaps = 2/169 (1%)
Frame = +3
Query: 24 LTQRRANQLQFRA--RGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEE 197
L + + ++ +F A G+ +P DA M L GWI++ R + F LW+ W E
Sbjct: 299 LREHQFDEAKFEAWKNGETGFPLIDAAMKALINYGWINYQLRGLLMSFAAN-QLWLHWRE 357
Query: 198 GMKVFDELLLDADWSVNAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPAL 377
L D D +V+ + Y PV + DP G FIR AL
Sbjct: 358 PALHMARLSTDYDPAVHFPLTQ-QFAGTTGMFEQKIYNPVTESHRLDPAGKFIRAECSAL 416
Query: 378 KNMPTRYIHEPWMAPESVQAAAQCSIGRDYPMPMVDHTKASQINIERIK 524
+ + Y+H PW P + Q + C +G+DYPMP++++ AS I +R+K
Sbjct: 417 REVSDAYLHAPWKMPHAEQIMSGCVLGQDYPMPIINNEDASLIAGQRLK 465
>UniRef50_Q1MZD6 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Oceanobacter sp. RED65|Rep: Deoxyribodipyrimidine
photolyase - Oceanobacter sp. RED65
Length = 478
Score = 85.8 bits (203), Expect = 9e-16
Identities = 53/169 (31%), Positives = 82/169 (48%), Gaps = 1/169 (0%)
Frame = +3
Query: 66 GKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSV 245
G+ YP DA M QL + GW+H+ R A FL++ L+I W G F + L+D D +
Sbjct: 319 GRTGYPLVDAAMRQLNQTGWMHNRLRMVAAMFLSK-HLFIDWRLGEAYFMQQLIDGDLAS 377
Query: 246 NAGMWMW-XXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMAP 422
N G W W + P+R + D G F+R+Y+P L ++ + IH P P
Sbjct: 378 NNGGWQWSASTGVDAVPYFRIFNPIRQSERFDSKGTFLRQYVPELASLDDKRIHNP--DP 435
Query: 423 ESVQAAAQCSIGRDYPMPMVDHTKASQINIERIKQVYAQLARYKPQATL 569
+V+ +G YP P+VDH +A + K++ A + Q +L
Sbjct: 436 ITVK-----KLG--YPAPIVDHKQAVVQTKQWFKELDASNKEFYSQESL 477
>UniRef50_Q4P1D4 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 655
Score = 85.8 bits (203), Expect = 9e-16
Identities = 50/155 (32%), Positives = 77/155 (49%), Gaps = 1/155 (0%)
Frame = +3
Query: 63 RGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWS 242
+G+ YP DA Q ++G+IH+ R A FLT+ L W G + F +D D++
Sbjct: 502 QGRTGYPIVDAAQRQCIQQGYIHNRGRMISAMFLTK-HLLHDWRHGERHFSLNFIDQDFA 560
Query: 243 VNAGMWMWXXXXXXXXXXX-HCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMA 419
N G W W + P+ K DP+GD+IR ++P LKN+ IH+P+
Sbjct: 561 SNNGGWQWSASTGTDPQPYFRIFNPLSQSEKCDPHGDYIRHFVPELKNVKGNAIHDPF-- 618
Query: 420 PESVQAAAQCSIGRDYPMPMVDHTKASQINIERIK 524
+ A +G YP P+V+H +A Q ++R K
Sbjct: 619 -HRLSKAEFEKLG--YPKPIVEHAQARQRALKRYK 650
>UniRef50_Q4KML2 Cluster: Cryptochrome DASH; n=11; cellular
organisms|Rep: Cryptochrome DASH - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 520
Score = 85.4 bits (202), Expect = 1e-15
Identities = 43/139 (30%), Positives = 72/139 (51%)
Frame = +3
Query: 66 GKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSV 245
G+ P+ DA M +L G++ + R VA FLT+ DL + W G + F+ LL+D D
Sbjct: 336 GRTGVPFVDANMRELALTGFMSNRGRQNVASFLTK-DLGLDWRLGAEWFEYLLVDHDVCS 394
Query: 246 NAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMAPE 425
N G W++ + ++ G D NGD++R+++P L+ + +H PW
Sbjct: 395 NYGNWLYSAGIGNDPRENRKFNMIKQGLDYDNNGDYVRQWVPELRGIKGGDVHTPWTLSN 454
Query: 426 SVQAAAQCSIGRDYPMPMV 482
S + AQ S+ + YP P++
Sbjct: 455 SALSHAQVSLNQTYPCPII 473
>UniRef50_A6VUF2 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;
Marinomonas sp. MWYL1|Rep: Deoxyribodipyrimidine
photo-lyase - Marinomonas sp. MWYL1
Length = 470
Score = 85.0 bits (201), Expect = 2e-15
Identities = 50/157 (31%), Positives = 76/157 (48%), Gaps = 3/157 (1%)
Frame = +3
Query: 36 RANQLQFRA--RGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKV 209
R N+ +F+A G+ +P DA M QL + GW+H+ R A F T+ ++ W G
Sbjct: 310 RQNEEEFQAWCEGRTGFPIVDAAMRQLNQTGWMHNRLRMVAASFFTKL-MFADWRRGEAY 368
Query: 210 FDELLLDADWSVNAGMWMWXXXXXXXXXXX-HCYCPVRFGRKTDPNGDFIRKYIPALKNM 386
F L+D +++ N G W W + P R + D NGDFIR+++P L +
Sbjct: 369 FMSKLIDGEFAANNGGWQWSASTGCDAAPYFRVFNPTRQSQTYDKNGDFIRRFVPELTKL 428
Query: 387 PTRYIHEPWMAPESVQAAAQCSIGRDYPMPMVDHTKA 497
+ IH+P PE QC YP P++D+ A
Sbjct: 429 DAKSIHDP--KPEQ---RKQC----HYPEPIIDYKPA 456
>UniRef50_A0JYK6 Cluster: Deoxyribodipyrimidine photo-lyase; n=11;
Bacteria|Rep: Deoxyribodipyrimidine photo-lyase -
Arthrobacter sp. (strain FB24)
Length = 474
Score = 85.0 bits (201), Expect = 2e-15
Identities = 45/128 (35%), Positives = 66/128 (51%), Gaps = 1/128 (0%)
Frame = +3
Query: 45 QLQFRARGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELL 224
+L+ +G+ YP DA M QL + GW+H+ R A A FL + +L W G F + L
Sbjct: 319 ELEAWQQGRTGYPLVDAGMRQLWQTGWMHNRVRMAAASFLVK-NLLADWRLGEAWFWDTL 377
Query: 225 LDADWSVNAGMWMWXXXXXXXXXXX-HCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYI 401
+DAD + N W W + PV +K D G ++R++IP + N+ + I
Sbjct: 378 VDADSASNPANWQWVAGSGADASPYFRIFNPVTQSKKFDAAGRYLREFIPEIANLSEKEI 437
Query: 402 HEPWMAPE 425
HEPW APE
Sbjct: 438 HEPWKAPE 445
>UniRef50_Q55081 Cluster: Deoxyribodipyrimidine photo-lyase; n=15;
Cyanobacteria|Rep: Deoxyribodipyrimidine photo-lyase -
Synechocystis sp. (strain PCC 6803)
Length = 488
Score = 85.0 bits (201), Expect = 2e-15
Identities = 50/153 (32%), Positives = 74/153 (48%), Gaps = 2/153 (1%)
Frame = +3
Query: 42 NQLQFRA--RGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFD 215
NQ F+A G+ YP DA M QL + GW+H+ R VA FL + DL ++W+ G F
Sbjct: 331 NQDHFQAWCEGRTGYPIIDAAMAQLNQTGWMHNRCRMIVASFLIK-DLILNWQWGELYFM 389
Query: 216 ELLLDADWSVNAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTR 395
+ L D D + N G W W + P +K DP G++IR ++P L T
Sbjct: 390 QTLYDGDLAANNGGWQWSASSGMDPKPLRIFNPHTQAQKFDPEGEYIRTWLPQLARFDTG 449
Query: 396 YIHEPWMAPESVQAAAQCSIGRDYPMPMVDHTK 494
+ + P S ++ +YP P+VDH +
Sbjct: 450 DLLTGKLTPGSRRSV-------NYPEPIVDHNQ 475
>UniRef50_Q7UJB1 Cluster: Cryptochrome DASH; n=7; cellular
organisms|Rep: Cryptochrome DASH - Rhodopirellula
baltica
Length = 488
Score = 85.0 bits (201), Expect = 2e-15
Identities = 46/141 (32%), Positives = 73/141 (51%), Gaps = 1/141 (0%)
Frame = +3
Query: 66 GKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSV 245
G YP DA M +LR G++ + R VA FLT+ +L I W G + F+ L+D D +
Sbjct: 330 GTTGYPLVDANMRELRTTGYMSNRGRQNVASFLTK-NLGIDWRWGARWFESQLVDYDVAS 388
Query: 246 NAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPW-MAP 422
N G W + + + R D G++ + ++P L+++ IHEPW M+P
Sbjct: 389 NYGNWNYAAGVGNDARGFRFFNITKQSRDYDSQGEYAKHWLPELRDLDVTEIHEPWKMSP 448
Query: 423 ESVQAAAQCSIGRDYPMPMVD 485
E Q ++G++YP P+VD
Sbjct: 449 ERQQEVG-ATLGKEYPHPIVD 468
>UniRef50_Q9HVD2 Cluster: Deoxyribodipyrimidine photolyase; n=22;
Proteobacteria|Rep: Deoxyribodipyrimidine photolyase -
Pseudomonas aeruginosa
Length = 481
Score = 84.6 bits (200), Expect = 2e-15
Identities = 52/154 (33%), Positives = 76/154 (49%), Gaps = 1/154 (0%)
Frame = +3
Query: 45 QLQFRARGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELL 224
+L+ +G+ P DA M QL GW+H+ R VA FL++ +L I W EG + F L
Sbjct: 321 ELEAWQQGRTGIPIIDAAMRQLLATGWMHNRLRMVVAMFLSK-NLLIDWREGERWFMRHL 379
Query: 225 LDADWSVNAGMWMW-XXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYI 401
+D D + N G W W + P+ + DP G+FIR ++P L + + I
Sbjct: 380 IDGDLAANNGGWQWSASTGTDAVPYFRLFNPLSQSERFDPRGEFIRHWLPELAGLERKAI 439
Query: 402 HEPWMAPESVQAAAQCSIGRDYPMPMVDHTKASQ 503
H+P ++ G DYP PMVD KAS+
Sbjct: 440 HDP--------SSLGLFAGVDYPRPMVD-LKASR 464
>UniRef50_Q4T4M6 Cluster: Chromosome undetermined SCAF9582, whole
genome shotgun sequence; n=3; Clupeocephala|Rep:
Chromosome undetermined SCAF9582, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 755
Score = 84.2 bits (199), Expect = 3e-15
Identities = 55/175 (31%), Positives = 81/175 (46%), Gaps = 12/175 (6%)
Frame = +3
Query: 63 RGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFD--------- 215
RG YP DA M QL GW+++ RH VA FL L + W+EG + F
Sbjct: 439 RGGTGYPLVDAAMRQLWLTGWMNNYMRHVVASFLI-AYLHLPWQEGYRWFQVRNGCRGDT 497
Query: 216 --ELLLDADWSVNAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMP 389
+ L+DAD +++A MW + PV DP+G ++RK+ P L +P
Sbjct: 498 GQDTLVDADVAIDAMMWQNGGMCGLDHWNFVMH-PVDAAMTCDPDGSYVRKWCPELSGLP 556
Query: 390 TRYIHEPWMAPESVQAAAQCSIGRDYPMPMV-DHTKASQINIERIKQVYAQLARY 551
IH+PW P SV A +G+ YP +V D + ++ + V Q +Y
Sbjct: 557 DELIHKPWKCPASVLRRAGVVLGQTYPERIVTDLEERRSRSLRDVALVRKQFGQY 611
>UniRef50_Q15TU1 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Pseudoalteromonas atlantica T6c|Rep:
Deoxyribodipyrimidine photolyase - Pseudoalteromonas
atlantica (strain T6c / BAA-1087)
Length = 481
Score = 84.2 bits (199), Expect = 3e-15
Identities = 54/172 (31%), Positives = 80/172 (46%), Gaps = 4/172 (2%)
Frame = +3
Query: 39 ANQLQFRA--RGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVF 212
+NQ F A GK YP DA MI LRE GW+H+ R VA F + L + W+ F
Sbjct: 319 SNQHHFDAWKAGKTGYPIVDAAMIALRETGWMHNRLRMIVASFYCK-HLLLPWKWAEDYF 377
Query: 213 DELLLDADWSVNAGMWMW-XXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMP 389
L+D D++ N G W W + P + DP G+FI+ ++P L+++
Sbjct: 378 MSQLIDGDYASNNGGWQWSASVGTDAAPYFRIFNPTTQSERFDPKGEFIKTWLPELEHLS 437
Query: 390 TRYIHEPWMAPESVQAAAQCSIGR-DYPMPMVDHTKASQINIERIKQVYAQL 542
+ IHEP + C + R Y +P+V+H + E+ K A L
Sbjct: 438 PKQIHEP---------SKHCDVQRIGYALPIVEHKASVMRTKEQFKGFLAAL 480
>UniRef50_A0YDZ0 Cluster: Deoxyribodipyrimidine photolyase; n=3;
Proteobacteria|Rep: Deoxyribodipyrimidine photolyase -
marine gamma proteobacterium HTCC2143
Length = 528
Score = 83.8 bits (198), Expect = 4e-15
Identities = 46/157 (29%), Positives = 75/157 (47%)
Frame = +3
Query: 60 ARGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADW 239
A G YP+ DA M L +GWI R + F + LW+ W L D +
Sbjct: 335 ATGHTGYPFIDACMRNLIADGWITFRMRAMLVSFASY-QLWLDWRVIGDHLARLFTDFEP 393
Query: 240 SVNAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMA 419
++ + Y PV+ + DPNGD+IRK++P L ++P +IHEPW
Sbjct: 394 GIHYSQ-LQMQSGVTGINAMRVYNPVKQSIEHDPNGDYIRKWVPELADLPIEFIHEPWTW 452
Query: 420 PESVQAAAQCSIGRDYPMPMVDHTKASQINIERIKQV 530
+++ A C +G Y P+VD+ A++ E++ ++
Sbjct: 453 GKNLIDDASCILGTVYSEPIVDNASAAKDAKEKLAEI 489
>UniRef50_Q2S3C6 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Salinibacter ruber DSM 13855|Rep: Deoxyribodipyrimidine
photolyase - Salinibacter ruber (strain DSM 13855)
Length = 483
Score = 83.4 bits (197), Expect = 5e-15
Identities = 45/148 (30%), Positives = 73/148 (49%)
Frame = +3
Query: 60 ARGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADW 239
A G P+ DA M +L G++ + R VA L++ L + W G F+ L+D D
Sbjct: 331 AAGTTGIPFVDANMRELNRTGYMSNRGRQNVASMLSQS-LKLDWRMGAAYFESRLVDYDV 389
Query: 240 SVNAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMA 419
+ N G W + + + V+ ++ D NG+++R ++P L ++P +Y+HEP
Sbjct: 390 ASNWGNWAYNSRVGNDPRARY-FNIVKQAKRYDENGEYVRYWLPELADVPDKYVHEPNRM 448
Query: 420 PESVQAAAQCSIGRDYPMPMVDHTKASQ 503
Q C +G DYP P+VD K Q
Sbjct: 449 SHEQQKKYGCVLGADYPKPVVDLDKTYQ 476
>UniRef50_Q5V0Z1 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Haloarcula marismortui|Rep: Deoxyribodipyrimidine
photolyase - Haloarcula marismortui (Halobacterium
marismortui)
Length = 534
Score = 83.0 bits (196), Expect = 6e-15
Identities = 49/155 (31%), Positives = 75/155 (48%)
Frame = +3
Query: 66 GKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSV 245
G+ +P DA M LR+ GW++ R +++ + L W G F L+DA ++
Sbjct: 326 GQTGFPMVDASMRCLRQTGWLNFRMR-SMSASVYYHLLQQPWRIGADWFYHHLIDASAAI 384
Query: 246 NAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMAPE 425
N W Y P + R DP+G+FIR+++P L+++P Y+ P P
Sbjct: 385 NYTQWQ-SQCGLVGKPALRLYNPRKQVRDQDPDGEFIRQWVPELESLPDEYLDRPEQTPV 443
Query: 426 SVQAAAQCSIGRDYPMPMVDHTKASQINIERIKQV 530
VQA+ IG DYP P+VD+ A Q R + V
Sbjct: 444 HVQASCGVDIGDDYPHPVVDYDAARQAFHRRYEAV 478
>UniRef50_Q5V438 Cluster: Photolyase/cryptochrome; n=3;
Halobacteriaceae|Rep: Photolyase/cryptochrome -
Haloarcula marismortui (Halobacterium marismortui)
Length = 464
Score = 82.6 bits (195), Expect = 8e-15
Identities = 47/144 (32%), Positives = 72/144 (50%)
Frame = +3
Query: 66 GKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSV 245
G+ YP+ DA M QL +EG+IH+ R VA FLT+ L + W EG + F + L+D D +
Sbjct: 311 GETGYPFIDAGMRQLEQEGYIHNRPRQNVASFLTK-HLLVDWREGARHFRKRLVDHDPAN 369
Query: 246 NAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMAPE 425
NA W W + PV K D D++ +Y+P L+ +P+ I + W
Sbjct: 370 NAASWQWTASTGTDSVDVRIFDPVAQMSKYDSGADYVTEYVPELRGVPSTKIVD-W---P 425
Query: 426 SVQAAAQCSIGRDYPMPMVDHTKA 497
++ + + DY P+VD A
Sbjct: 426 TLSDGEREELAPDYYHPIVDRNAA 449
>UniRef50_Q9HQ46 Cluster: Deoxyribodipyrimidine photo-lyase; n=5;
Halobacteriaceae|Rep: Deoxyribodipyrimidine photo-lyase
- Halobacterium salinarium (Halobacterium halobium)
Length = 481
Score = 82.6 bits (195), Expect = 8e-15
Identities = 49/150 (32%), Positives = 75/150 (50%), Gaps = 1/150 (0%)
Frame = +3
Query: 48 LQFRARGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLL 227
LQ G+ YP DA M QLR E ++H+ R VA FLT+ DL + W G F E L
Sbjct: 321 LQAWKDGETGYPIVDAGMRQLRAEAYMHNRVRMIVAAFLTK-DLLVDWRAGYDWFREKLA 379
Query: 228 DADWSVNAGMWMW-XXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIH 404
D D + + G W W + P+ G + DP+ D+I +++P L+++P IH
Sbjct: 380 DHDTANDNGGWQWAASTGTDAQPYFRVFNPMTQGERYDPDADYITEFVPELRDVPADAIH 439
Query: 405 EPWMAPESVQAAAQCSIGRDYPMPMVDHTK 494
W + + + +YP P+VDH++
Sbjct: 440 S-W---HELSLSERRRHAPEYPDPIVDHSQ 465
>UniRef50_Q31DQ9 Cluster: Deoxyribodipyrimidine photolyase family
protein; n=1; Thiomicrospira crunogena XCL-2|Rep:
Deoxyribodipyrimidine photolyase family protein -
Thiomicrospira crunogena (strain XCL-2)
Length = 479
Score = 81.0 bits (191), Expect = 3e-14
Identities = 42/118 (35%), Positives = 63/118 (53%), Gaps = 1/118 (0%)
Frame = +3
Query: 66 GKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSV 245
G+ P DA M QL E GW+H+ R VA +LT+ + I W G + F++ L+DAD +
Sbjct: 328 GRTGVPIIDAGMKQLWETGWMHNRVRMLVASWLTK-NADIDWRAGAQWFNDTLVDADPAN 386
Query: 246 NAGMWMWXXXXXXXXXXXH-CYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWM 416
N W W + + PVR K D NG ++R+++P LK ++IH PW+
Sbjct: 387 NTLGWQWVAGCGVDAAPYYRLFNPVRQSEKFDANGQYLRQWLPELKTYSNKHIHAPWL 444
>UniRef50_Q0S6Q2 Cluster: Deoxyribodipyrimidine photo-lyase; n=3;
Corynebacterineae|Rep: Deoxyribodipyrimidine photo-lyase
- Rhodococcus sp. (strain RHA1)
Length = 446
Score = 81.0 bits (191), Expect = 3e-14
Identities = 47/158 (29%), Positives = 74/158 (46%), Gaps = 1/158 (0%)
Frame = +3
Query: 66 GKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSV 245
G+ +P DA M QL+ E W+H+ R VA F + DL + W G + F L+D D +
Sbjct: 300 GRTGFPIVDAGMRQLKAEAWMHNRVRMIVASFFVK-DLHLPWWRGARYFMNQLVDGDLAN 358
Query: 246 NAGMWMWXXXXXXXXXXX-HCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMAP 422
N W W + P G K DP+G+++R+++P L+ +P + +H
Sbjct: 359 NQHGWQWTAGSGTDASPYFRVFNPTTQGEKFDPDGEYVRRWVPELRGIPGKAVH------ 412
Query: 423 ESVQAAAQCSIGRDYPMPMVDHTKASQINIERIKQVYA 536
A + DYP P+VDH Q + R ++ A
Sbjct: 413 -----ALKDGRPEDYPPPIVDHAHERQEALARYGEIKA 445
>UniRef50_A3X5Z0 Cluster: Deoxyribodipyrimidine photolyase; n=3;
Alphaproteobacteria|Rep: Deoxyribodipyrimidine
photolyase - Roseobacter sp. MED193
Length = 502
Score = 80.6 bits (190), Expect = 3e-14
Identities = 50/164 (30%), Positives = 77/164 (46%)
Frame = +3
Query: 39 ANQLQFRARGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDE 218
A +LQ +G+ YP+ DA M LR GW++ R A+ + LW+ W +
Sbjct: 301 AARLQAWEKGETGYPFLDACMRCLRSTGWLNFRMR-AMLMAVAAYHLWLDWRAPGQHLAR 359
Query: 219 LLLDADWSVNAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRY 398
+ D + ++ + Y PV+ G DP G FIR ++P L +P R+
Sbjct: 360 MFTDYEPGIHWSQ-VQMQSGTTGINTVRIYNPVKQGFDQDPTGIFIRIWLPELAQIPDRH 418
Query: 399 IHEPWMAPESVQAAAQCSIGRDYPMPMVDHTKASQINIERIKQV 530
+HEPW A S + IGR YP + DH A++ E+I +V
Sbjct: 419 LHEPWAADNSAEV-----IGRHYPERIFDHMAAAKAAREKIWEV 457
>UniRef50_Q4P1U6 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 623
Score = 80.6 bits (190), Expect = 3e-14
Identities = 40/135 (29%), Positives = 69/135 (51%)
Frame = +3
Query: 81 PWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSVNAGMW 260
P DA M+++ + G++ + R VA FLT+ DL +W G + F+ L+D + + N G W
Sbjct: 437 PLIDANMVEMVQTGFMSNRGRQNVASFLTK-DLGWNWRHGAEFFESWLVDYEPNSNWGNW 495
Query: 261 MWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMAPESVQAA 440
+ + P++ G D NG+++ ++P L +MP +Y H PW P++ A
Sbjct: 496 QYVAGVGNDPRSSRQFNPIKQGNDYDANGEYVATWLPLLSDMPPQYRHHPWTCPDAAW-A 554
Query: 441 AQCSIGRDYPMPMVD 485
Q P P+V+
Sbjct: 555 EQAHSAHYPPTPIVE 569
>UniRef50_Q0I8L2 Cluster: Deoxyribodipyrimidine photolyase family
protein; n=4; Bacteria|Rep: Deoxyribodipyrimidine
photolyase family protein - Synechococcus sp. (strain
CC9311)
Length = 504
Score = 80.2 bits (189), Expect = 4e-14
Identities = 45/154 (29%), Positives = 71/154 (46%)
Frame = +3
Query: 60 ARGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADW 239
A G+ P+ DA M LR GWI+ R + F + LW+ W + +D +
Sbjct: 300 AEGRTGVPFVDACMRALRAHGWINFRMRAMLMSFASY-HLWLPWRDSGLHLARQFVDYEP 358
Query: 240 SVNAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMA 419
++ Y P++ G+ D NG+FIR ++P L + Y+HEPW
Sbjct: 359 GIHWSQCQMQSGSTAINTV-RVYNPIKQGQDHDLNGEFIRTWVPELHLVSNVYVHEPWKL 417
Query: 420 PESVQAAAQCSIGRDYPMPMVDHTKASQINIERI 521
+ Q A +G DYP+PMV+ A++ +RI
Sbjct: 418 STAAQRQAGLQLGVDYPLPMVEPALAAREAKQRI 451
>UniRef50_Q46H89 Cluster: Deoxyribodipyrimidine photolyase; n=7;
Prochlorococcus marinus|Rep: Deoxyribodipyrimidine
photolyase - Prochlorococcus marinus (strain NATL2A)
Length = 493
Score = 79.8 bits (188), Expect = 6e-14
Identities = 52/171 (30%), Positives = 79/171 (46%)
Frame = +3
Query: 30 QRRANQLQFRARGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKV 209
Q R + + G P DA M QL+ GW+H+ R VA FL + DL I W G
Sbjct: 336 QNRPDWFEAWGDGLTGIPIIDAAMRQLKCSGWMHNRCRMIVASFLVK-DLLIDWRLGELF 394
Query: 210 FDELLLDADWSVNAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMP 389
F + L+D D + N G W W + P R K D +G++IRK+IP L ++
Sbjct: 395 FMKSLVDGDLAANNGGWQWSASSGMDPKPMRIFNPFRQASKFDEDGEYIRKWIPELSHIS 454
Query: 390 TRYIHEPWMAPESVQAAAQCSIGRDYPMPMVDHTKASQINIERIKQVYAQL 542
T P + + +A + S YP P++ H + I K++Y+ +
Sbjct: 455 T-----PNLLSGEISSAERNS----YPKPIISHKNQTSI----FKELYSNI 492
>UniRef50_A0UAX4 Cluster: Deoxyribodipyrimidine photo-lyase; n=2;
Proteobacteria|Rep: Deoxyribodipyrimidine photo-lyase -
Burkholderia multivorans ATCC 17616
Length = 476
Score = 79.8 bits (188), Expect = 6e-14
Identities = 56/169 (33%), Positives = 79/169 (46%), Gaps = 1/169 (0%)
Frame = +3
Query: 45 QLQFRARGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELL 224
QL +G+ P DA M QL + GW+H+ R VA FLT+ +L W G + F + L
Sbjct: 315 QLARWQQGRTGIPLVDAGMRQLWQTGWMHNRVRMVVASFLTK-NLRQHWRHGARWFWDTL 373
Query: 225 LDADWSVNAGMWMW-XXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYI 401
+DAD + N W W + P K DP+ ++++++P L +P +
Sbjct: 374 VDADLANNTLGWQWVAGCGADAAPYFRVFNPYLQAAKFDPDAAYLKRWLPELSRLPADVL 433
Query: 402 HEPWMAPESVQAAAQCSIGRDYPMPMVDHTKASQINIERIKQVYAQLAR 548
H PW + A A C YP PMVD AS+ E YAQL R
Sbjct: 434 HRPW---KHSAALAACG----YPTPMVD-LAASR---EAALAAYAQLPR 471
>UniRef50_Q89AJ9 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;
Buchnera aphidicola (Baizongia pistaciae)|Rep:
Deoxyribodipyrimidine photo-lyase - Buchnera aphidicola
subsp. Baizongia pistaciae
Length = 478
Score = 79.8 bits (188), Expect = 6e-14
Identities = 44/117 (37%), Positives = 59/117 (50%), Gaps = 1/117 (0%)
Frame = +3
Query: 63 RGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWS 242
+G YP DA M QL++ GWI + R A FL + +L I W +G + F L+D D++
Sbjct: 323 QGNTGYPIIDAGMRQLKQLGWISNRLRMITASFLVK-NLLIDWRKGEEYFMSQLIDGDFA 381
Query: 243 VNAGMWMWXXXXXXXXXXX-HCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEP 410
N G W W + P+ +K D N FIRKYIP L N+ T IH P
Sbjct: 382 SNNGNWQWIASVGTDSMPYFRIFNPMLQSKKFDINAKFIRKYIPELSNVSTYNIHNP 438
>UniRef50_Q4PFI2 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 881
Score = 79.0 bits (186), Expect = 1e-13
Identities = 37/117 (31%), Positives = 63/117 (53%)
Frame = +3
Query: 66 GKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSV 245
G+ P+ DA +++LRE G++ + R VA FL++ DL W G + F L+D D +
Sbjct: 481 GRTGIPFIDANILELRESGFMSNRGRQNVASFLSK-DLGYDWRIGAEFFQSHLIDYDPTS 539
Query: 246 NAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWM 416
N G W + + V+ + D +GD+++ +IPAL+N+ Y+H PW+
Sbjct: 540 NYGNWQYVAGVGNDPRASRQFNTVKQAKDYDSHGDYVKLWIPALRNLHADYVHTPWL 596
>UniRef50_Q5NMI6 Cluster: DNA photolyase; n=1; Zymomonas
mobilis|Rep: DNA photolyase - Zymomonas mobilis
Length = 469
Score = 78.6 bits (185), Expect = 1e-13
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 1/168 (0%)
Frame = +3
Query: 30 QRRANQLQFRARGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKV 209
++ ++ LQ G+ YP+ DA M L + G++ + R A FL + L I W EG K
Sbjct: 309 KKASDNLQRWKEGQTGYPFIDAGMRALWQTGFMPNRLRMVTASFLVK-HLLIDWREGKKW 367
Query: 210 FDELLLDADWSVNAGMWMWXXXXXXXXXXX-HCYCPVRFGRKTDPNGDFIRKYIPALKNM 386
F + L+D D + NA W W P+ +K DP+G +IR+++ L ++
Sbjct: 368 FAQTLVDYDPACNATNWQWVAGSGIESAPYFRIMNPILQSQKFDPDGQYIREWVKELADV 427
Query: 387 PTRYIHEPWMAPESVQAAAQCSIGRDYPMPMVDHTKASQINIERIKQV 530
T +IH PW A + Q A +YP+P++ H + + K++
Sbjct: 428 STAFIHTPWKADK--QPA-------NYPLPIIAHEEGRNRALRAWKEI 466
>UniRef50_A1ZF62 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Microscilla marina ATCC 23134|Rep: Deoxyribodipyrimidine
photolyase - Microscilla marina ATCC 23134
Length = 545
Score = 78.6 bits (185), Expect = 1e-13
Identities = 45/156 (28%), Positives = 74/156 (47%), Gaps = 1/156 (0%)
Frame = +3
Query: 21 ELTQRRANQL-QFRARGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEE 197
+L Q N L + G+ +P DA M +R+ G+++ R + FLT LW SW
Sbjct: 331 QLEQNHKNDLLEAWKNGQTGFPLVDASMRCIRQTGYLNFQMRSLIVSFLTH-HLWQSWHT 389
Query: 198 GMKVFDELLLDADWSVNAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPAL 377
G+ + LD + V+ + P++ +K DP FI+K++P L
Sbjct: 390 GVHYLGQQFLDYEPGVHFVRFQ-AQAGAVDTHKVKILNPIKVSKKCDPKAQFIKKWVPEL 448
Query: 378 KNMPTRYIHEPWMAPESVQAAAQCSIGRDYPMPMVD 485
KN+P IH+ Q +C+IG+DYP P+++
Sbjct: 449 KNIPAGLIHDLSKMTTIEQIFYKCTIGQDYPAPIIN 484
>UniRef50_A1SV40 Cluster: Deoxyribodipyrimidine photo-lyase; n=9;
Gammaproteobacteria|Rep: Deoxyribodipyrimidine
photo-lyase - Psychromonas ingrahamii (strain 37)
Length = 517
Score = 78.2 bits (184), Expect = 2e-13
Identities = 47/165 (28%), Positives = 74/165 (44%)
Frame = +3
Query: 12 NCGELTQRRANQLQFRARGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISW 191
+CG + R N+ + G YP DA M+ L + G+I+ R + FL L + W
Sbjct: 313 HCGLSVETRLNKWKTAQTG---YPLVDACMLCLIKTGYINFRMRAMLVSFLCH-HLLLDW 368
Query: 192 EEGMKVFDELLLDADWSVNAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIP 371
G+ +L LD + ++ + Y PV+ + D +G FIR ++P
Sbjct: 369 RLGVSYLAKLFLDFEPGIHYPQFQMQSGVTGTNII-RVYNPVKQSLEKDKDGLFIRTWLP 427
Query: 372 ALKNMPTRYIHEPWMAPESVQAAAQCSIGRDYPMPMVDHTKASQI 506
L +P IH PW Q QC +G YP+P+VD + +I
Sbjct: 428 QLSELPNEIIHTPWQLSPMEQQLYQCQLGETYPLPIVDINETGKI 472
>UniRef50_Q5DZH3 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Vibrio fischeri ES114|Rep: Deoxyribodipyrimidine
photolyase - Vibrio fischeri (strain ATCC 700601 /
ES114)
Length = 479
Score = 77.8 bits (183), Expect = 2e-13
Identities = 50/156 (32%), Positives = 72/156 (46%), Gaps = 1/156 (0%)
Frame = +3
Query: 63 RGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWS 242
+G+ +P DA M QL GW+H+ R A FL + DL I W G + F L+D D++
Sbjct: 325 KGETGFPIVDAAMKQLNTTGWMHNRLRMITASFLVK-DLHIDWRWGEQYFMSKLIDGDFA 383
Query: 243 VNAGMWMW-XXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMA 419
N G W W + P+ G+K D + FI+ ++P LK + + IH P A
Sbjct: 384 SNNGGWQWCASVGCDSSPYFRIFNPITQGKKFDADCTFIKHWLPELKALSNKEIHHPNPA 443
Query: 420 PESVQAAAQCSIGRDYPMPMVDHTKASQINIERIKQ 527
P +YP +VDH + IE KQ
Sbjct: 444 P--------LLKSDNYPDQIVDHAQQRIKVIEVYKQ 471
>UniRef50_Q1VSH5 Cluster: Putative deoxyribodipyrimidine photolyase;
n=1; Psychroflexus torquis ATCC 700755|Rep: Putative
deoxyribodipyrimidine photolyase - Psychroflexus torquis
ATCC 700755
Length = 485
Score = 77.4 bits (182), Expect = 3e-13
Identities = 45/176 (25%), Positives = 83/176 (47%), Gaps = 1/176 (0%)
Frame = +3
Query: 63 RGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWS 242
+G+ +P DA M L + G+++ R + F T LW +W+E L LD +
Sbjct: 309 KGETGFPLVDASMKCLIQTGYLNFRMRALLVSFFTHL-LWQTWQEASSHLASLFLDFEPG 367
Query: 243 VNAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMAP 422
++ + Y PV+ K D +G+FI Y+P+LK +P ++HEPW
Sbjct: 368 IHYPQ-LQMQAGTTGIHTLRIYNPVKNSYKHDLDGEFILTYLPSLKGIPLEFVHEPWKLT 426
Query: 423 ESVQAAAQCSIGRDYPMPMVDHTKASQINIERI-KQVYAQLARYKPQATLNANAVQ 587
Q+ +G+DYP P+++ Q + I K + +Q ++ + + L + ++
Sbjct: 427 AMEQSMYNFELGKDYPRPIIEMATTRQHASDSIWKIIQSQKSKIEGKKILKRHTLR 482
>UniRef50_Q2G0A6 Cluster: Deoxyribodipyrimidine photolyase,
putative; n=15; Staphylococcus|Rep:
Deoxyribodipyrimidine photolyase, putative -
Staphylococcus aureus (strain NCTC 8325)
Length = 457
Score = 77.0 bits (181), Expect = 4e-13
Identities = 47/159 (29%), Positives = 76/159 (47%), Gaps = 4/159 (2%)
Frame = +3
Query: 42 NQLQFRA--RGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFD 215
N+ F A G+ +P DA +++L + G++H+ R V+ FLT+ DL+I W G K F
Sbjct: 293 NEADFNAWCEGQTGFPIIDAAIMELTQTGFMHNRMRMVVSQFLTK-DLFIDWTWGEKFFR 351
Query: 216 ELLLDADWSVNAGMWMW-XXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPT 392
+ L+D D + N W W + P+R + D +I+ Y+P +
Sbjct: 352 KHLIDYDAASNIHGWQWSASTGTDAVPYFRMFNPIRQSERFDAKALYIKTYLPIFNQIDA 411
Query: 393 RYIHEPWMAPESVQAAAQCSIGRDYPMPMVDH-TKASQI 506
+Y+H+ ES +G YP MVDH K +Q+
Sbjct: 412 KYLHDT-QRNESNLFEQGIELGSHYPRQMVDHQEKRTQV 449
>UniRef50_A4M6R0 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;
Petrotoga mobilis SJ95|Rep: Deoxyribodipyrimidine
photo-lyase - Petrotoga mobilis SJ95
Length = 462
Score = 77.0 bits (181), Expect = 4e-13
Identities = 51/157 (32%), Positives = 74/157 (47%), Gaps = 1/157 (0%)
Frame = +3
Query: 66 GKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSV 245
G+ YP DA M QL GW+H+ R FL + DL I W G K F + L+D D ++
Sbjct: 320 GRTGYPIVDAGMRQLNLTGWMHNRVRMITGSFLVK-DLHIDWRWGEKYFAQRLVDYDPAI 378
Query: 246 NAGMWMW-XXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMAP 422
N G W W + P+ +K DP ++I+ ++P L N+ IH P
Sbjct: 379 NNGNWQWVASTGCDAQPFFRIFNPILQQQKFDPECNYIKTWLPELTNLNLEQIH-TLNIP 437
Query: 423 ESVQAAAQCSIGRDYPMPMVDHTKASQINIERIKQVY 533
+ + DYP P+VDH AS E+ K++Y
Sbjct: 438 KDI----------DYPTPIVDHKVAS----EKAKKLY 460
>UniRef50_A2BUZ7 Cluster: Putative deoxyribodipyrimidine photolyase;
n=3; Prochlorococcus marinus|Rep: Putative
deoxyribodipyrimidine photolyase - Prochlorococcus
marinus (strain MIT 9515)
Length = 503
Score = 76.6 bits (180), Expect = 6e-13
Identities = 40/170 (23%), Positives = 85/170 (50%)
Frame = +3
Query: 21 ELTQRRANQLQFRARGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEG 200
++ ++ ++ L+ + GK +P+ DA M L GW++ R + F + +LWI W+E
Sbjct: 287 KIRKKDSHLLKLWSEGKTGFPFLDACMRSLNFHGWLNFRMRAMLMSFASY-NLWIPWQES 345
Query: 201 MKVFDELLLDADWSVNAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALK 380
LD + ++ Y P++ G+ DP G+FI+K++P ++
Sbjct: 346 GSELASKFLDYEPGIHWNQCQMQAGTTSINVN-RIYNPIKQGKDHDPKGNFIKKWVPEIQ 404
Query: 381 NMPTRYIHEPWMAPESVQAAAQCSIGRDYPMPMVDHTKASQINIERIKQV 530
N P ++HEPW+ + + S +Y P+++ ++ ++ +RI+++
Sbjct: 405 NYPENFVHEPWLMEKFNSKEYENS---EYIKPIINLSETTKNARKRIQEI 451
>UniRef50_Q5U9C7 Cluster: Cryptochrome 2; n=1; Erithacus
rubecula|Rep: Cryptochrome 2 - Erithacus rubecula
(European robin)
Length = 128
Score = 75.8 bits (178), Expect = 1e-12
Identities = 31/50 (62%), Positives = 40/50 (80%)
Frame = +3
Query: 405 EPWMAPESVQAAAQCSIGRDYPMPMVDHTKASQINIERIKQVYAQLARYK 554
EPW APESVQ A+C IG DYP PMV+H + S++NIER+KQ+Y QL+ Y+
Sbjct: 1 EPWNAPESVQKEAKCIIGVDYPKPMVNHAETSRLNIERMKQIYQQLSHYR 50
>UniRef50_P27526 Cluster: Deoxyribodipyrimidine photo-lyase; n=16;
Pezizomycotina|Rep: Deoxyribodipyrimidine photo-lyase -
Neurospora crassa
Length = 642
Score = 75.8 bits (178), Expect = 1e-12
Identities = 49/167 (29%), Positives = 84/167 (50%), Gaps = 8/167 (4%)
Frame = +3
Query: 63 RGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWS 242
+G+ +P DA M Q+ G++H+ R VA FL + DL + W G + F E L+D D++
Sbjct: 478 QGRTGFPIIDAAMRQVLSTGYMHNRLRMIVASFLAK-DLLVDWRMGERYFMEHLIDGDFA 536
Query: 243 VNAGMWMWXXXXXXXXXXX-HCYCPVRFGRKTDPNGDFIRKYIPALKNMPT------RYI 401
N G W + + P+ K DP+GD+IRK++ L+++P I
Sbjct: 537 SNNGGWGFAASVGVDPQPYFRVFNPLLQSEKFDPDGDYIRKWVEELRDLPELKGGKGGEI 596
Query: 402 HEPW-MAPESVQAAAQCSIGRDYPMPMVDHTKASQINIERIKQVYAQ 539
H+P+ E V+ + + YP P+V+H+ A ++ K+ A+
Sbjct: 597 HDPYGRGSEKVKKKLE---EKGYPRPIVEHSGARDRALDAYKRGLAR 640
>UniRef50_Q1RKC7 Cluster: Deoxyribodipyrimidine photo-lyase; n=2;
Rickettsia bellii|Rep: Deoxyribodipyrimidine photo-lyase
- Rickettsia bellii (strain RML369-C)
Length = 475
Score = 75.4 bits (177), Expect = 1e-12
Identities = 36/110 (32%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
Frame = +3
Query: 78 YPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSVNAGM 257
YP DA + QL +GW+H+ +R VA F ++ +L + W +G + F + L+D + + N G
Sbjct: 334 YPIIDAAVKQLVGDGWMHNRARMIVASFFSK-NLLLDWRKGEEFFAQYLMDYELASNVGG 392
Query: 258 WMWXXXXXXXXXXX-HCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIH 404
W W + P G+ DP+ ++I+KY+P LKN+ IH
Sbjct: 393 WQWASSCGTDAQPYFRIFNPYTQGKNFDPDAEYIKKYLPILKNVQPHIIH 442
>UniRef50_A4BJR5 Cluster: Putative deoxyribodipyrimidine photolyase;
n=1; Reinekea sp. MED297|Rep: Putative
deoxyribodipyrimidine photolyase - Reinekea sp. MED297
Length = 465
Score = 75.4 bits (177), Expect = 1e-12
Identities = 49/173 (28%), Positives = 77/173 (44%), Gaps = 1/173 (0%)
Frame = +3
Query: 30 QRRANQLQFRARGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKV 209
Q+ L+ GK P DA M QLRE GW+H+ R +L + L W +G
Sbjct: 303 QKNETWLERWREGKTGVPIVDAAMRQLRETGWMHNRLRMVTGMYLVK-ILQQDWRQGEAW 361
Query: 210 FDELLLDADWSVNAGMWMW-XXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNM 386
F E L D D++ N G W W + P + ++ DPNG FI ++ L ++
Sbjct: 362 FAEHLADFDFAANNGGWQWVASTGVDAVPYFRIFNPYQQSKRFDPNGQFILTFVTELNDV 421
Query: 387 PTRYIHEPWMAPESVQAAAQCSIGRDYPMPMVDHTKASQINIERIKQVYAQLA 545
+H+ + A S YP P+ D++KA Q +++ K + + A
Sbjct: 422 KPALLHDH-------KRALSVS---SYPKPLTDYSKARQDTLDKFKALGSHAA 464
>UniRef50_Q0IDI4 Cluster: Deoxyribodipyrimidine photolyase; n=10;
Synechococcus|Rep: Deoxyribodipyrimidine photolyase -
Synechococcus sp. (strain CC9311)
Length = 492
Score = 74.9 bits (176), Expect = 2e-12
Identities = 37/110 (33%), Positives = 55/110 (50%)
Frame = +3
Query: 66 GKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSV 245
G+ P DA M QL + GW+H+ R VA FL + DL W G + F EL +D D +
Sbjct: 346 GQTGMPIIDAAMRQLNQSGWMHNRCRMIVASFLVK-DLICDWRWGERAFMELEVDGDLAA 404
Query: 246 NAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTR 395
N G W W + P K D G++IR+++P L+++ T+
Sbjct: 405 NNGGWQWSASSGMDPKPLRIFNPATQATKFDAEGEYIREWVPELRHVNTK 454
>UniRef50_Q2BAD6 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Bacillus sp. NRRL B-14911|Rep: Deoxyribodipyrimidine
photolyase - Bacillus sp. NRRL B-14911
Length = 474
Score = 74.5 bits (175), Expect = 2e-12
Identities = 56/192 (29%), Positives = 87/192 (45%), Gaps = 3/192 (1%)
Frame = +3
Query: 9 ANCGELTQRRANQLQFRAR---GKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDL 179
AN + RA+ + + G P DA M LR+ GW+++ SR +A F L
Sbjct: 280 ANAADSNSARAHDAELLEKWRTGNTGIPSVDASMRCLRKTGWLNYSSRRMLAGFACN-IL 338
Query: 180 WISWEEGMKVFDELLLDADWSVNAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIR 359
+ WE+ L LD + +V+ M PV++G++ D +G FIR
Sbjct: 339 LLDWEKAALELALLFLDHEPAVHMKE-MGILAGKSGSKTVKIIDPVKWGKELDTDGSFIR 397
Query: 360 KYIPALKNMPTRYIHEPWMAPESVQAAAQCSIGRDYPMPMVDHTKASQINIERIKQVYAQ 539
+Y+P LK++ YIHEPW+ P Q YP P+ D KA + + +Q+ Q
Sbjct: 398 RYVPELKDVDAAYIHEPWLYPGFFQLG--------YPAPICDVRKAIK---QAKRQIEDQ 446
Query: 540 LARYKPQATLNA 575
KP+ L +
Sbjct: 447 KKDQKPKDILKS 458
>UniRef50_A1ZPZ8 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Microscilla marina ATCC 23134|Rep: Deoxyribodipyrimidine
photolyase - Microscilla marina ATCC 23134
Length = 483
Score = 74.5 bits (175), Expect = 2e-12
Identities = 41/153 (26%), Positives = 72/153 (47%)
Frame = +3
Query: 21 ELTQRRANQLQFRARGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEG 200
E++ R + G+ P+ DA M +L G++ + R VA +LT+ DL I+W G
Sbjct: 328 EMSSNRKRTFKRWKNGETGIPFIDANMRELNATGFMSNRGRQNVASYLTK-DLKINWVHG 386
Query: 201 MKVFDELLLDADWSVNAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALK 380
F+ L+D D S N W + + + + D G +++ ++P L
Sbjct: 387 AMYFESQLIDYDVSSNWCNWNYVAGVGNDPRKDRYFDILSQANRYDNKGAYVKHWLPELA 446
Query: 381 NMPTRYIHEPWMAPESVQAAAQCSIGRDYPMPM 479
++P +HEP + Q A + +G+DYP P+
Sbjct: 447 SIPENKVHEPHQLKATEQQAYEMILGQDYPKPI 479
>UniRef50_Q2S3L9 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Salinibacter ruber DSM 13855|Rep: Deoxyribodipyrimidine
photolyase - Salinibacter ruber (strain DSM 13855)
Length = 463
Score = 72.1 bits (169), Expect = 1e-11
Identities = 45/144 (31%), Positives = 70/144 (48%)
Frame = +3
Query: 66 GKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSV 245
G P+ DA M +LRE G++H+ R VA FLT+ DL + W G + F L D D +V
Sbjct: 310 GATGVPFVDAGMRELRETGYMHNRVRMVVASFLTK-DLLVDWRWGAQHFARTLTDYDPAV 368
Query: 246 NAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMAPE 425
NAG W W Y P K DP ++I++++P +++ + +A
Sbjct: 369 NAGNWQW-AASVGTDYRLRIYNPYSQAEKHDPEAEYIKRWVPEVRD-----VDADRLASG 422
Query: 426 SVQAAAQCSIGRDYPMPMVDHTKA 497
+ + + + G YP P+VD A
Sbjct: 423 TQEDFSDAAPG--YPAPIVDRNDA 444
>UniRef50_A3JA18 Cluster: Deoxyribodipyrimidine photolyase; n=2;
Marinobacter|Rep: Deoxyribodipyrimidine photolyase -
Marinobacter sp. ELB17
Length = 488
Score = 72.1 bits (169), Expect = 1e-11
Identities = 38/116 (32%), Positives = 55/116 (47%), Gaps = 1/116 (0%)
Frame = +3
Query: 66 GKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSV 245
G+ P DA M QL E W+H+ R A FLT+ +L+I W G F L D +
Sbjct: 341 GRTGIPMVDAAMRQLNETSWMHNRLRMVAAMFLTK-NLFIDWRRGEAYFMSKLADGYLAS 399
Query: 246 NAGMWMW-XXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEP 410
N G W W + P+ G + D +G+FIR ++P L + ++ IH P
Sbjct: 400 NNGGWQWSASTGTDASPYFRVFNPMTQGERFDADGEFIRHWVPELAKLDSKRIHNP 455
>UniRef50_Q18K78 Cluster: Deoxyribodipyrimidine photolyase; n=2;
Halobacteriaceae|Rep: Deoxyribodipyrimidine photolyase -
Haloquadratum walsbyi (strain DSM 16790)
Length = 719
Score = 72.1 bits (169), Expect = 1e-11
Identities = 43/140 (30%), Positives = 63/140 (45%)
Frame = +3
Query: 66 GKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSV 245
G+ +P DA M LRE GW++ R T L W G F L+D+D +
Sbjct: 417 GQTGFPMVDASMRCLRETGWLNFRMRAMCVSIFTH-ILQQPWWIGADWFHHHLIDSDVGI 475
Query: 246 NAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMAPE 425
N W Y P + R D +G++I K++P L ++P ++ P P
Sbjct: 476 NYTQWQ-SQAGLIGKPSQRVYNPRKQVRDHDSDGEWITKWVPELSDLPAQHFPRPERTPL 534
Query: 426 SVQAAAQCSIGRDYPMPMVD 485
+VQ+ IG DYP P+VD
Sbjct: 535 AVQSECNVIIGDDYPRPVVD 554
>UniRef50_A5WDG4 Cluster: Deoxyribodipyrimidine photo-lyase; n=3;
Psychrobacter|Rep: Deoxyribodipyrimidine photo-lyase -
Psychrobacter sp. PRwf-1
Length = 550
Score = 71.7 bits (168), Expect = 2e-11
Identities = 42/155 (27%), Positives = 74/155 (47%), Gaps = 1/155 (0%)
Frame = +3
Query: 63 RGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWS 242
+G P DA M L + G++H+ R A FLT+ DL+I W G + F + L+D D++
Sbjct: 395 QGMTGVPLIDAAMRCLNQTGFMHNRLRMVTAMFLTK-DLFIDWRLGERYFMQNLIDGDFA 453
Query: 243 VNAGMWMW-XXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMA 419
N G W W P + D + FI+ ++P L ++ +H+
Sbjct: 454 SNNGGWQWSASTGTDAAPYFRIMNPFSQAKTHDKDAIFIKSWLPELTDITANILHDENKL 513
Query: 420 PESVQAAAQCSIGRDYPMPMVDHTKASQINIERIK 524
+++ + +YP+PM++H +A + IE+ K
Sbjct: 514 RKALSKQGAFA-HVNYPLPMIEHKQARRYAIEQFK 547
>UniRef50_Q1N8J8 Cluster: Deoxyribodipyrimidine photolyase; n=5;
Sphingomonadales|Rep: Deoxyribodipyrimidine photolyase -
Sphingomonas sp. SKA58
Length = 458
Score = 70.5 bits (165), Expect = 4e-11
Identities = 42/131 (32%), Positives = 65/131 (49%), Gaps = 1/131 (0%)
Frame = +3
Query: 21 ELTQRRANQLQFRARGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEG 200
+L + R + + ++ +G+ YP DA M QL GW+H+ R A FL + L I W G
Sbjct: 298 DLREARGDFVAWK-KGRTGYPIVDAGMRQLWTTGWMHNRVRMIAASFLIK-HLLIDWRHG 355
Query: 201 MKVFDELLLDADWSVNAGMWMW-XXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPAL 377
K F + L+DAD++ N+ W W P+ K D GD+IR+++P L
Sbjct: 356 AKWFWDTLVDADYANNSVNWQWVAGSGIDANMFSRIMAPLTQSEKFDA-GDYIRQWVPEL 414
Query: 378 KNMPTRYIHEP 410
+ IH+P
Sbjct: 415 AALSNEVIHDP 425
>UniRef50_A1SER8 Cluster: Deoxyribodipyrimidine photo-lyase; n=12;
Actinomycetales|Rep: Deoxyribodipyrimidine photo-lyase -
Nocardioides sp. (strain BAA-499 / JS614)
Length = 453
Score = 70.5 bits (165), Expect = 4e-11
Identities = 45/143 (31%), Positives = 67/143 (46%), Gaps = 2/143 (1%)
Frame = +3
Query: 66 GKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSV 245
G+ + DA M QLR GW+H+ R A FL + DL + W+ G + F L+D D +
Sbjct: 306 GRTGFSVVDAGMRQLRATGWMHNRVRMITASFLVK-DLHLEWQLGARHFLRWLVDGDLAS 364
Query: 246 NAGMWMW-XXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMP-TRYIHEPWMA 419
N W W + P GR+ DP G+++R+++P L + H+P +
Sbjct: 365 NQHGWQWTAGCGTDAAPYFRVFNPTAQGRRFDPRGEYVRRWVPELADPDVVADPHDP--S 422
Query: 420 PESVQAAAQCSIGRDYPMPMVDH 488
P QA YP P+VDH
Sbjct: 423 PSERQAVG-------YPEPIVDH 438
>UniRef50_A1U5B0 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;
Marinobacter aquaeolei VT8|Rep: Deoxyribodipyrimidine
photo-lyase - Marinobacter aquaeolei (strain ATCC 700491
/ DSM 11845 / VT8)(Marinobacter hydrocarbonoclasticus
(strain DSM 11845))
Length = 505
Score = 70.1 bits (164), Expect = 5e-11
Identities = 50/199 (25%), Positives = 81/199 (40%), Gaps = 1/199 (0%)
Frame = +3
Query: 66 GKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSV 245
G+ +P DA M L GWI+ R A+ + LW+ W + L D + +
Sbjct: 312 GQTGWPLVDACMRSLEHTGWINFRMR-AMLMAVASYQLWLHWRDPALHLARLFTDFEPGI 370
Query: 246 NAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMAPE 425
+ Y PV +K DP G+FIR++IP L +P IH PW+
Sbjct: 371 HYPQAQMQSGLTGINAL-RIYNPVLQSQKLDPEGEFIRRWIPELAGVPAEMIHTPWL--- 426
Query: 426 SVQAAAQCSIGRDYPMPMVDHTKASQINIERIKQV-YAQLARYKPQATLNANAVQRPNVL 602
A Q G Y P+ DH +A+++ + + + Q+++ + LN + ++
Sbjct: 427 MTPAQKQRFGGNTYISPVCDHEQAARVARKAVGEFRKRQVSQTETDRVLNRHGSRKGPTQ 486
Query: 603 ASRXPVXHQ*SPXSTXPTF 659
H P S P F
Sbjct: 487 NRPRTGSHDSEPASQLPLF 505
>UniRef50_Q12TR5 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Methanococcoides burtonii DSM 6242|Rep:
Deoxyribodipyrimidine photolyase - Methanococcoides
burtonii (strain DSM 6242)
Length = 467
Score = 70.1 bits (164), Expect = 5e-11
Identities = 46/154 (29%), Positives = 72/154 (46%), Gaps = 1/154 (0%)
Frame = +3
Query: 66 GKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSV 245
GK +P DA M +L G++H+ R VA FL + DL I W+ G + F L+D D V
Sbjct: 316 GKTGFPIVDAGMRELNTTGYMHNRVRMIVASFLVK-DLHIDWKRGERYFASKLVDYDPCV 374
Query: 246 NAGMWMW-XXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMAP 422
N G W W + P +K D + +I+K+IP L+++ + IH+
Sbjct: 375 NNGNWQWAASTGADSQPYFRIFNPWLQQKKFDKDCKYIKKWIPELEDIEPQRIHKLEKGD 434
Query: 423 ESVQAAAQCSIGRDYPMPMVDHTKASQINIERIK 524
+ YP P+VDH+K ++ + K
Sbjct: 435 MDIPG---------YPAPIVDHSKEREVALFMFK 459
>UniRef50_A6H180 Cluster: Deoxyribodipyrimidine photolyase PhrB2;
n=1; Flavobacterium psychrophilum JIP02/86|Rep:
Deoxyribodipyrimidine photolyase PhrB2 - Flavobacterium
psychrophilum (strain JIP02/86 / ATCC 49511)
Length = 502
Score = 69.7 bits (163), Expect = 6e-11
Identities = 42/140 (30%), Positives = 62/140 (44%)
Frame = +3
Query: 66 GKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSV 245
GK P DA M L G+I+ R V F T +LW W E + LD + +
Sbjct: 315 GKTGVPIVDACMRCLVTTGYINFRMRAMVVSFFTF-NLWQDWRE-LHFLARQFLDYEPGI 372
Query: 246 NAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMAPE 425
+ + Y P++ + DP G FI++++P L +P +HEPW +
Sbjct: 373 HYPQ-IQMQSGTTGINTIRIYNPIKNSEEHDPEGIFIKQWLPELAEIPLSLLHEPWKMND 431
Query: 426 SVQAAAQCSIGRDYPMPMVD 485
Q C IG DYP P+V+
Sbjct: 432 MEQQFYNCKIGEDYPTPIVN 451
>UniRef50_Q8D319 Cluster: PhrB protein; n=1; Wigglesworthia
glossinidia endosymbiont of Glossina brevipalpis|Rep:
PhrB protein - Wigglesworthia glossinidia brevipalpis
Length = 475
Score = 69.3 bits (162), Expect = 8e-11
Identities = 45/163 (27%), Positives = 76/163 (46%), Gaps = 3/163 (1%)
Frame = +3
Query: 30 QRRANQLQFRARGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKV 209
+ + ++Q G +P DA M QL++ GW+H+ R + FL + DL + W+ G K
Sbjct: 306 ENKIKKIQAWKNGTTGFPIIDAAMRQLKKTGWMHNRLRMITSSFLVK-DLLVDWKIGEKY 364
Query: 210 FDELLLDADWSVNAGMWMWXXXXXXXXXXX-HCYCPVRFGRKTDPNGDFIRKYIPALKNM 386
F L+D + ++N W W P+ +K +I+ +IP LKN+
Sbjct: 365 FYYHLIDGNSAINNFNWQWISSSGICSSPYFRMINPITQSKKFKSIYKYIKFWIPELKNI 424
Query: 387 PTRYIHEP--WMAPESVQAAAQCSIGRDYPMPMVDHTKASQIN 509
P IHEP W+ + +YP +++H K ++IN
Sbjct: 425 PFNEIHEPYNWIIKNKI----------NYPNQIIEH-KTAKIN 456
>UniRef50_Q4USX1 Cluster: Photolyase-like protein; n=6;
Xanthomonas|Rep: Photolyase-like protein - Xanthomonas
campestris pv. campestris (strain 8004)
Length = 484
Score = 69.3 bits (162), Expect = 8e-11
Identities = 41/128 (32%), Positives = 59/128 (46%), Gaps = 1/128 (0%)
Frame = +3
Query: 63 RGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWS 242
RG+ P DA + QL GW+H+ R VA L + L + W EG + F + L+DAD +
Sbjct: 331 RGRTGIPIVDAGLRQLWHTGWMHNRVRMIVASLLCK-HLRVHWLEGARWFWDTLVDADLA 389
Query: 243 VNAGMWMWXXXXXXXXXXX-HCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMA 419
N W W + PV K DP +I ++IP L +P + PW+
Sbjct: 390 NNTMGWQWVAGTGADAAPYFRVFNPVTQAEKFDPQATYITRWIPELAALPVKERFAPWLH 449
Query: 420 PESVQAAA 443
P S+ A
Sbjct: 450 PLSLARLA 457
>UniRef50_Q6BZK7 Cluster: Similar to tr|O93963 Trichoderma harzianum
DNA photolyase; n=2; Saccharomycetaceae|Rep: Similar to
tr|O93963 Trichoderma harzianum DNA photolyase -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 555
Score = 68.9 bits (161), Expect = 1e-10
Identities = 46/156 (29%), Positives = 73/156 (46%), Gaps = 2/156 (1%)
Frame = +3
Query: 63 RGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWS 242
+GK +P DA M QL + G++H+ R VA FL++ L I W+ G F E L+D D++
Sbjct: 402 QGKTGFPIVDAAMRQLNQTGYLHNRCRMIVASFLSK-HLLIDWKYGEYYFMEHLIDGDFA 460
Query: 243 VNAGMWMW-XXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNM-PTRYIHEPWM 416
N G W + + P + D G +IR ++P LK++ + IH P+
Sbjct: 461 SNNGGWGFSSSTGVDPQPYFRIFNPWLQSERFDKKGTYIRTWVPELKDIQDEKGIHNPY- 519
Query: 417 APESVQAAAQCSIGRDYPMPMVDHTKASQINIERIK 524
+ + YP P+VDH + + R K
Sbjct: 520 ----EKGYGHIAEKNGYPKPIVDHKYCRERALNRFK 551
>UniRef50_Q28R72 Cluster: Deoxyribodipyrimidine photolyase; n=5;
Bacteria|Rep: Deoxyribodipyrimidine photolyase -
Jannaschia sp. (strain CCS1)
Length = 517
Score = 68.1 bits (159), Expect = 2e-10
Identities = 45/160 (28%), Positives = 70/160 (43%)
Frame = +3
Query: 39 ANQLQFRARGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDE 218
A +L +G+ P+ DA M L GWI+ R +A + LW+ W
Sbjct: 305 ATRLSAWEKGETGIPFVDACMRSLIATGWINFRMRAMLAAVASY-HLWLDWRRTGPHLAR 363
Query: 219 LLLDADWSVNAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRY 398
+ D + ++ M Y PV+ G DP G F R + P L+ +P
Sbjct: 364 MFTDYEPGIHWPQ-MQMQAGTTGMNTIRIYNPVKQGLDHDPTGTFTRTWCPELREVPDAC 422
Query: 399 IHEPWMAPESVQAAAQCSIGRDYPMPMVDHTKASQINIER 518
+ PW E+ AA+ +GR YP P+VD T+A++ +R
Sbjct: 423 LQTPWAWAETGSPAAR-RLGRRYPAPIVDVTQAARAARDR 461
>UniRef50_A3J6I6 Cluster: Deoxyribodipyrimidine photolyase; n=4;
Flavobacteriales|Rep: Deoxyribodipyrimidine photolyase -
Flavobacteria bacterium BAL38
Length = 486
Score = 68.1 bits (159), Expect = 2e-10
Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 2/161 (1%)
Frame = +3
Query: 33 RRANQLQFRA--RGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMK 206
+R N+ +A GK P DA M L G+++ R V F T L+ W+
Sbjct: 296 QRVNEKYHKAWITGKTGVPLVDACMRCLNTTGYLNFRMRALVVSFYTH-HLFQPWQNCSP 354
Query: 207 VFDELLLDADWSVNAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNM 386
+ LD + ++ + Y PV+ + D +G FI+K++P L +
Sbjct: 355 HLAQQFLDFEPGIHYPQ-IQMQAGVTGINTLRVYNPVKNSYEHDADGTFIKKWVPELATI 413
Query: 387 PTRYIHEPWMAPESVQAAAQCSIGRDYPMPMVDHTKASQIN 509
P +IHEPW Q IG+DYP+P+V+ +A + +
Sbjct: 414 PAEFIHEPWKLTPIEQILYNFEIGKDYPLPIVNLEEARKFS 454
>UniRef50_A0Z3E3 Cluster: Deoxyribodipyrimidine photolyase,
putative; n=3; Gammaproteobacteria|Rep:
Deoxyribodipyrimidine photolyase, putative - marine
gamma proteobacterium HTCC2080
Length = 490
Score = 68.1 bits (159), Expect = 2e-10
Identities = 39/140 (27%), Positives = 63/140 (45%)
Frame = +3
Query: 66 GKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSV 245
G+ +P+ DA M L G++H +R + FLT LW W G+ L LD + +
Sbjct: 312 GQTGFPYVDACMRCLEATGYLHFRARAMLVSFLTH-HLWQDWRLGVTWLGSLFLDFEPGI 370
Query: 246 NAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMAPE 425
+ M Y PV+ + DP FIR+++P + ++PT +H+PW+
Sbjct: 371 HYPQ-MQMQAGVTGINTIRIYNPVKQSLEHDPTASFIRRWVPEIADLPTPLVHQPWLRSP 429
Query: 426 SVQAAAQCSIGRDYPMPMVD 485
DYP P+V+
Sbjct: 430 LEHVLHPV----DYPEPIVN 445
>UniRef50_Q1VSH4 Cluster: Deoxyribodipyrimidine photolyase-class I;
n=13; Bacteroidetes|Rep: Deoxyribodipyrimidine
photolyase-class I - Psychroflexus torquis ATCC 700755
Length = 457
Score = 63.3 bits (147), Expect(2) = 3e-10
Identities = 39/113 (34%), Positives = 51/113 (45%), Gaps = 1/113 (0%)
Frame = +3
Query: 42 NQLQFRARGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDEL 221
N+ + +GK YP DA M QL E GW+H+ R V FL + L I W G F E
Sbjct: 317 NEFEKWKKGKTGYPIVDAGMRQLNETGWMHNRLRMVVGSFLCK-HLLIDWRWGEAYFAEK 375
Query: 222 LLDADWSVNAGMWMW-XXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPAL 377
LLD + S N G W W + P + D + +I K+IP L
Sbjct: 376 LLDYEMSSNVGGWQWVAGSGVDAAPYFRIFNPYSQTDRFDKDKKYIMKWIPEL 428
Score = 24.2 bits (50), Expect(2) = 3e-10
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 465 YPMPMVDHTKASQINIERIKQ 527
YP PMVDH A + +E K+
Sbjct: 433 YPKPMVDHKIARERCLETYKE 453
>UniRef50_A5GT79 Cluster: Deoxyribodipyrimidine photolyase; n=7;
Synechococcus|Rep: Deoxyribodipyrimidine photolyase -
Synechococcus sp. (strain RCC307)
Length = 503
Score = 67.3 bits (157), Expect = 3e-10
Identities = 39/146 (26%), Positives = 66/146 (45%)
Frame = +3
Query: 66 GKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSV 245
G+ +P+ DA M LR GWI+ R A+ + LW+ W + + L +D + +
Sbjct: 321 GRTGWPFVDACMRALRHHGWINFRMR-AMLMSVASYQLWLPWRQSGEALARLFVDYEPGI 379
Query: 246 NAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMAPE 425
+ Y P++ G DP G FIR+++P L+ +P IH PW+ +
Sbjct: 380 HWNQCQMQSGTSGINTV-RIYNPIKQGLDHDPEGAFIRQWLPELQGVPVSGIHTPWLLAQ 438
Query: 426 SVQAAAQCSIGRDYPMPMVDHTKASQ 503
+ YP P+VD+ A++
Sbjct: 439 PPET---------YPHPVVDYEAAAR 455
>UniRef50_Q1EKB9 Cluster: Putative cryptochrome; n=4; Picea
abies|Rep: Putative cryptochrome - Picea abies (Norway
spruce) (Picea excelsa)
Length = 259
Score = 66.9 bits (156), Expect = 4e-10
Identities = 27/74 (36%), Positives = 48/74 (64%)
Frame = +3
Query: 324 GRKTDPNGDFIRKYIPALKNMPTRYIHEPWMAPESVQAAAQCSIGRDYPMPMVDHTKASQ 503
G K DP G+++R+++P L +PT +IH PW AP +V AA +G +YP+P+V+ + A +
Sbjct: 32 GYKFDPAGEYVRRWLPELARLPTEWIHHPWDAPRAVLQAAGVELGSNYPLPIVEISTAKE 91
Query: 504 INIERIKQVYAQLA 545
E + +++ + A
Sbjct: 92 RLQEGLSEMWQREA 105
>UniRef50_Q389M9 Cluster: Deoxyribodipyrimidine photolyase,
putative; n=1; Trypanosoma brucei|Rep:
Deoxyribodipyrimidine photolyase, putative - Trypanosoma
brucei
Length = 568
Score = 66.9 bits (156), Expect = 4e-10
Identities = 37/125 (29%), Positives = 62/125 (49%), Gaps = 3/125 (2%)
Frame = +3
Query: 42 NQLQFRA--RGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFD 215
N +F A G +P DA + L + GW H+ R +A FL + L++ W EG + +
Sbjct: 371 NDAEFTAFKSGATGFPLVDAAVRCLTKTGWCHNRCRMLIANFLVKV-LFVDWREGERWYA 429
Query: 216 ELLLDADWSVNAGMWMWXXXXXXXXXXX-HCYCPVRFGRKTDPNGDFIRKYIPALKNMPT 392
+ +D D + N+G W+W + P R + DP FI++++P L+N+
Sbjct: 430 TVAVDYDVANNSGGWLWSSGQGADAQPYFRFFNPFRQSAQHDPQAVFIKQWVPELRNVSV 489
Query: 393 RYIHE 407
R IH+
Sbjct: 490 RTIHK 494
>UniRef50_Q30Q43 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Thiomicrospira denitrificans ATCC 33889|Rep:
Deoxyribodipyrimidine photolyase - Thiomicrospira
denitrificans (strain ATCC 33889 / DSM 1351)
Length = 445
Score = 66.5 bits (155), Expect = 6e-10
Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 1/154 (0%)
Frame = +3
Query: 69 KPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSVN 248
K P DA + +L + G++H+ R VA F T+ DL + W+ G + F E LLD D + N
Sbjct: 300 KTGVPIVDAGVRELLKTGYMHNRVRMVVASFFTK-DLLLPWQWGERFFAEHLLDYDKASN 358
Query: 249 AGMWMW-XXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMAPE 425
W W + P +K D +I++Y+ L + + IH+
Sbjct: 359 VLSWQWSAGTGVDPQPYFRIFNPYLQSKKFDKEALYIKRYVSELSTIEIKNIHK------ 412
Query: 426 SVQAAAQCSIGRDYPMPMVDHTKASQINIERIKQ 527
+ C+ +DYP P+V H +AS+ +E K+
Sbjct: 413 --EEYLLCADIKDYPKPIVTHKEASKRAVELFKK 444
>UniRef50_A4S782 Cluster: Predicted protein; n=3; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 565
Score = 66.5 bits (155), Expect = 6e-10
Identities = 43/142 (30%), Positives = 60/142 (42%), Gaps = 3/142 (2%)
Frame = +3
Query: 66 GKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSV 245
G +P DA M +L GW+H R A FL + W G F + L+DAD ++
Sbjct: 258 GTTGFPTVDAGMRRLWATGWMHQSERMIAATFLV-DYCGVHWTHGADWFLDTLVDADLAI 316
Query: 246 NAGMWM--WXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYI-HEPWM 416
N+ MW P R DP G+ I ++IP L +P ++ H PW
Sbjct: 317 NSMMWQNAGKSGLDQWDVFAGSLTPDGSSRAHDPEGESIARWIPELAALPKGHLRHRPWE 376
Query: 417 APESVQAAAQCSIGRDYPMPMV 482
A AA +G YP M+
Sbjct: 377 ASAKQLDAAGVELGSTYPTRMI 398
>UniRef50_A6EZB3 Cluster: Deoxyribodipyrimidine photolyase family
protein; n=1; Marinobacter algicola DG893|Rep:
Deoxyribodipyrimidine photolyase family protein -
Marinobacter algicola DG893
Length = 507
Score = 66.1 bits (154), Expect = 8e-10
Identities = 43/155 (27%), Positives = 67/155 (43%)
Frame = +3
Query: 39 ANQLQFRARGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDE 218
+ +LQ G+ +P DA M L+ GWI+ R A+ + LW+ W +
Sbjct: 303 SERLQRWQEGQTGWPLVDACMRALQHTGWINFRMR-AMLMAVASYQLWLHWRDPALHLAR 361
Query: 219 LLLDADWSVNAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRY 398
D + ++ Y PV +K DP G+FIR++IP L +P
Sbjct: 362 QFTDFEPGIHYPQAQMQSGLTGINAL-RIYNPVLQSQKLDPQGEFIRRWIPELAGVPAEM 420
Query: 399 IHEPWMAPESVQAAAQCSIGRDYPMPMVDHTKASQ 503
IH PW+ + Q Q G Y P+ DH +A++
Sbjct: 421 IHTPWLLTPAQQ---QRFGGNTYIAPVCDHEQAAR 452
>UniRef50_Q2BJV5 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Neptuniibacter caesariensis|Rep: Deoxyribodipyrimidine
photolyase - Neptuniibacter caesariensis
Length = 468
Score = 65.7 bits (153), Expect = 1e-09
Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 1/155 (0%)
Frame = +3
Query: 63 RGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWS 242
+G+ + DA M +L E GW+H+ R A FLT+ L W G + F + L+D D++
Sbjct: 323 KGETGFAIVDAGMKELLETGWMHNRVRMITASFLTK-LLRQDWRLGARFFMQHLIDGDFA 381
Query: 243 VNAGMWMW-XXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMA 419
N G W W + P+R + D G ++ +Y+P+L+ + + H+P A
Sbjct: 382 SNLGGWQWSASVGADAAPYFRIFNPMRQAERFDAKGRYVGQYVPSLQGLTSVQQHDPMFA 441
Query: 420 PESVQAAAQCSIGRDYPMPMVDHTKASQINIERIK 524
S R P P++D+ Q +++ K
Sbjct: 442 ---------ASYSR--PTPIIDYAYERQYSLDAYK 465
>UniRef50_Q7M8M8 Cluster: DEOXYRIBODIPYRIMIDINE PHOTOLYASE DNA
PHOTOLYASEPHOTOREACTIVATING ENZYME; n=1; Wolinella
succinogenes|Rep: DEOXYRIBODIPYRIMIDINE PHOTOLYASE DNA
PHOTOLYASEPHOTOREACTIVATING ENZYME - Wolinella
succinogenes
Length = 447
Score = 65.3 bits (152), Expect = 1e-09
Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 1/112 (0%)
Frame = +3
Query: 63 RGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWS 242
+G+ P DA M +L G++H+ +R A FLT+ +L + W G + F LLD D +
Sbjct: 297 KGECGVPLVDAGMRELNHTGFMHNRARMVCASFLTK-NLHLHWSWGERYFASKLLDYDVA 355
Query: 243 VNAGMWMW-XXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTR 395
NAG W W + P K DP G++++++IP L+ + T+
Sbjct: 356 QNAGNWQWCAGSGADAQPFFRIFNPYTQSLKFDPKGEYVKRWIPELRGISTQ 407
>UniRef50_A6DFN1 Cluster: Deoxyribodipyrimidine photolyase; n=3;
Bacteria|Rep: Deoxyribodipyrimidine photolyase -
Lentisphaera araneosa HTCC2155
Length = 481
Score = 65.3 bits (152), Expect = 1e-09
Identities = 44/153 (28%), Positives = 67/153 (43%), Gaps = 1/153 (0%)
Frame = +3
Query: 66 GKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSV 245
GK YP DA M L GWI+ R + F L W +G+ +L LD + +
Sbjct: 310 GKTGYPLVDACMRCLHATGWINFRMRAMLTSFFCH-HLAQDWRDGVYHLAKLFLDYEPGI 368
Query: 246 NAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMAPE 425
+ + Y P++ DP G+FIR++IP LK++ IHEPW E
Sbjct: 369 HFPQFQMQAGTTGINTV-RIYNPIKQSMDNDPEGEFIRQWIPELKDLSNDEIHEPWKI-E 426
Query: 426 SVQAAAQCSIGRD-YPMPMVDHTKASQINIERI 521
++A + YP P++D + +RI
Sbjct: 427 IMEAKMKGYTNLHLYPAPIIDIKDTYSLARDRI 459
>UniRef50_A5GQG9 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Synechococcus sp. RCC307|Rep: Deoxyribodipyrimidine
photolyase - Synechococcus sp. (strain RCC307)
Length = 467
Score = 64.9 bits (151), Expect = 2e-09
Identities = 48/161 (29%), Positives = 68/161 (42%)
Frame = +3
Query: 66 GKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSV 245
G P DA M QL + G++H+ R VA FL + DL W G F +D D +
Sbjct: 321 GLTGVPIVDAAMRQLVQTGFMHNRCRMIVASFLVK-DLICDWRHGEAFFMAHEVDGDLAA 379
Query: 246 NAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMAPE 425
N G W W + P K DP +IR+++P L ++ T+ +
Sbjct: 380 NNGGWQWSASSGMDPKPLRIFNPFTQASKFDPEATYIRRWLPELAHINTK---------D 430
Query: 426 SVQAAAQCSIGRDYPMPMVDHTKASQINIERIKQVYAQLAR 548
+ R YP P+V+H K Q R K +YA L R
Sbjct: 431 LISGDIGALERRGYPEPIVNH-KQQQ---ARFKALYAALPR 467
>UniRef50_A4IYV0 Cluster: Deoxyribodipyrimidine photolyase; n=14;
Bacteria|Rep: Deoxyribodipyrimidine photolyase -
Francisella tularensis subsp. tularensis (strain
WY96-3418)
Length = 499
Score = 64.9 bits (151), Expect = 2e-09
Identities = 44/172 (25%), Positives = 70/172 (40%), Gaps = 2/172 (1%)
Frame = +3
Query: 21 ELTQRRANQLQFRA--RGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWE 194
+L NQ F A G YP DA M L GW++ R + F + LW+ W
Sbjct: 298 QLRTEPLNQQCFEAWKTGNTGYPMIDACMRALIATGWLNFRMRAMLMSFASY-HLWLDWR 356
Query: 195 EGMKVFDELLLDADWSVNAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPA 374
L D + ++ + Y P++ DPNG+FIR+++P
Sbjct: 357 VTSLYLARLFTDYEPGIHYSQ-VQMQSGTTGINSIRIYNPIKQSIDQDPNGEFIRRWLPE 415
Query: 375 LKNMPTRYIHEPWMAPESVQAAAQCSIGRDYPMPMVDHTKASQINIERIKQV 530
L+N+ IH PW+ + DYP P +D +A + + I ++
Sbjct: 416 LENVSNENIHTPWLEKHN---------SLDYPDPTIDEKQARKFAADNIYKI 458
>UniRef50_Q6ML17 Cluster: Deoxyribodipyrimidine photolyase-class I;
n=1; Bdellovibrio bacteriovorus|Rep:
Deoxyribodipyrimidine photolyase-class I - Bdellovibrio
bacteriovorus
Length = 435
Score = 64.5 bits (150), Expect = 2e-09
Identities = 36/103 (34%), Positives = 51/103 (49%), Gaps = 1/103 (0%)
Frame = +3
Query: 66 GKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSV 245
G+ YP DA M +L G++H+ R VA FL + L I W EG + F + LLD D S
Sbjct: 303 GRTGYPLVDAGMRELNATGYMHNRVRMVVASFLCK-HLLIHWYEGERYFAKKLLDYDLSA 361
Query: 246 NAGMWMW-XXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIP 371
N G W W + P K DP+G +++K++P
Sbjct: 362 NNGNWQWAAGSGCDAAPYFRIFNPQTQFEKFDPDGKYVQKWVP 404
>UniRef50_Q0V6S3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 642
Score = 63.3 bits (147), Expect = 6e-09
Identities = 46/155 (29%), Positives = 75/155 (48%)
Frame = +3
Query: 63 RGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWS 242
+G+ P+ DA M QL E ++H+ R V+ +L +L + + G + F E L+D D S
Sbjct: 496 KGETGEPFIDAGMRQLNHEAYMHNRLRMNVSSYLYC-NLLLDYRRGERYFAETLIDWDLS 554
Query: 243 VNAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMAP 422
N W + PV + DP+GD+IRK++P LK++ + + P+
Sbjct: 555 NNTQGW---------EPSYTVFNPVSQAERNDPDGDYIRKWVPELKDVQGKAVFAPY--- 602
Query: 423 ESVQAAAQCSIGRDYPMPMVDHTKASQINIERIKQ 527
+ A +G YP P VD + Q +ER K+
Sbjct: 603 ARLSKAEFEKLG--YPKPHVDWKQTKQRCMERFKR 635
>UniRef50_Q6L055 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Picrophilus torridus|Rep: Deoxyribodipyrimidine
photolyase - Picrophilus torridus
Length = 431
Score = 63.3 bits (147), Expect = 6e-09
Identities = 44/145 (30%), Positives = 64/145 (44%), Gaps = 1/145 (0%)
Frame = +3
Query: 66 GKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSV 245
G YP DA M L E G+I++ R V+ FL + DL + W G K F + L+D D +
Sbjct: 283 GLTGYPIVDAAMRSLNETGYINNRLRMIVSSFLVK-DLHVDWRIGEKYFAQKLIDYDPAS 341
Query: 246 NAGMWMWXXXXXXXXXXXHCYC-PVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMAP 422
N G W W + P +K DP FI++Y+ L ++ IH +
Sbjct: 342 NNGNWQWVASTGVNSRGMYRIINPWIQQKKFDPECKFIKRYVNELSDLEPEIIHNLYKIR 401
Query: 423 ESVQAAAQCSIGRDYPMPMVDHTKA 497
+ +YP P+VDH A
Sbjct: 402 LN-----------NYPAPLVDHKTA 415
>UniRef50_Q8FRW1 Cluster: Deoxyribodipyrimidine photolyase; n=5;
Corynebacterium|Rep: Deoxyribodipyrimidine photolyase -
Corynebacterium efficiens
Length = 492
Score = 60.9 bits (141), Expect = 3e-08
Identities = 38/103 (36%), Positives = 52/103 (50%), Gaps = 1/103 (0%)
Frame = +3
Query: 66 GKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSV 245
G+ P DA M +L G +H+ SR VA FLT+ +L I W G + F E L+DAD +
Sbjct: 362 GRTGIPLVDAGMRELWATGSMHNRSRMVVASFLTK-NLQIHWRHGEEWFWETLVDADPAS 420
Query: 246 NAGMWMW-XXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIP 371
NA W W + P RK DP+ +IR++IP
Sbjct: 421 NAFNWQWAAGSGDDASPYFRIFNPETQARKFDPDETYIRRWIP 463
>UniRef50_Q23DL8 Cluster: FAD binding domain of DNA photolyase
family protein; n=9; cellular organisms|Rep: FAD binding
domain of DNA photolyase family protein - Tetrahymena
thermophila SB210
Length = 486
Score = 60.5 bits (140), Expect = 4e-08
Identities = 42/117 (35%), Positives = 55/117 (47%), Gaps = 3/117 (2%)
Frame = +3
Query: 36 RANQLQFRA--RGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKV 209
R N +F A GK Y DA M QL + G++H+ R VA FLT+ L I W+ G +
Sbjct: 342 RNNVDEFMAWCEGKTGYHLVDAGMRQLNQTGYMHNRVRMVVASFLTK-HLLIDWKWGERY 400
Query: 210 FDELLLDADWSVNAGMWMW-XXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPAL 377
F LLD D S N G W W + P +K DPN +I+ +I L
Sbjct: 401 FASKLLDYDLSANNGGWQWAAGTGTDAQPYFRIFNPDSQQKKFDPNYTYIKTWIKDL 457
>UniRef50_A0YV59 Cluster: Deoxyribodipyrimidine photolyase; n=4;
Cyanobacteria|Rep: Deoxyribodipyrimidine photolyase -
Lyngbya sp. PCC 8106
Length = 512
Score = 59.7 bits (138), Expect = 7e-08
Identities = 46/178 (25%), Positives = 78/178 (43%), Gaps = 1/178 (0%)
Frame = +3
Query: 18 GELTQRRANQLQFRARGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEE 197
GEL + Q +GK +P DA M QL+ GW++ R A FLT +SW
Sbjct: 308 GELEGEKLEYFQAWQQGKTGFPLVDASMKQLQSMGWMNFRMRAMCANFLT-VICGVSWHH 366
Query: 198 GMKVFDELLLDADWSVNAGMWM-WXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPA 374
G + + L+D D ++N W Y P + + DP +F+R +IP
Sbjct: 367 GARHYMNYLVDGDIAINHWQWQAQAGVTNPLSSTFRIYNPTKNLTEKDPKFEFVRDWIPE 426
Query: 375 LKNMPTRYIHEPWMAPESVQAAAQCSIGRDYPMPMVDHTKASQINIERIKQVYAQLAR 548
L++ I ++ E + + YP PM+D + +IN + + ++ Q+ +
Sbjct: 427 LRDCTDEQI----LSGEIGELSG-------YPEPMLDWYEMRKINGKVVSELRKQVKK 473
>UniRef50_A0LR66 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;
Acidothermus cellulolyticus 11B|Rep:
Deoxyribodipyrimidine photo-lyase - Acidothermus
cellulolyticus (strain ATCC 43068 / 11B)
Length = 497
Score = 59.7 bits (138), Expect = 7e-08
Identities = 36/103 (34%), Positives = 49/103 (47%), Gaps = 1/103 (0%)
Frame = +3
Query: 60 ARGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADW 239
ARG+ Y DA M QL EGW+H+ R A FL + DL + W G + F L+D D
Sbjct: 358 ARGETGYGLVDAGMRQLLSEGWMHNRVRMVSASFLVK-DLHLDWRWGARWFLWHLVDGDI 416
Query: 240 SVNAGMWMWXXXXXXXXXXXH-CYCPVRFGRKTDPNGDFIRKY 365
+ N W W H + P R + DP+G + R+Y
Sbjct: 417 ASNNLNWQWVAGIGTDAAPYHRIFNPDRQAERFDPDGAYRRRY 459
>UniRef50_Q47SJ5 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Thermobifida fusca YX|Rep: Deoxyribodipyrimidine
photolyase - Thermobifida fusca (strain YX)
Length = 419
Score = 58.8 bits (136), Expect = 1e-07
Identities = 35/115 (30%), Positives = 54/115 (46%)
Frame = +3
Query: 66 GKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSV 245
G+ P DA M QL EG++ R A +LT+ L I W+ G F LL+D D +
Sbjct: 293 GRTGVPIVDAGMRQLLWEGYVPGRIRMLTATYLTQV-LRIHWKRGADHFYSLLVDGDVAN 351
Query: 246 NAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEP 410
N G W R + DP+GD++R+++P L+++ +H P
Sbjct: 352 NYGNWQQIAGTGGVPRPARRINLYRQAERYDPSGDYVRRFVPELRSISGSAVHHP 406
>UniRef50_Q4QHY9 Cluster: DNA photolyase, putative; n=3;
Leishmania|Rep: DNA photolyase, putative - Leishmania
major
Length = 934
Score = 58.4 bits (135), Expect = 2e-07
Identities = 38/138 (27%), Positives = 59/138 (42%)
Frame = +3
Query: 66 GKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSV 245
G P+ DA M +L G++ R A+A LTRG W G + + LD D V
Sbjct: 688 GLTGIPFADAAMRELVGTGFVAQEGRQALAWLLTRG-YGQDWRLGAEWMERCSLDYDPFV 746
Query: 246 NAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMAPE 425
G + + D G +++K++P L +P YIH P + E
Sbjct: 747 CYGNYAHSCGLMLDDFGEPVRNVYYLAHQHDQTGIYVKKWLPQLSKVPPVYIHRPHVLTE 806
Query: 426 SVQAAAQCSIGRDYPMPM 479
+QA +G++YP P+
Sbjct: 807 RMQAMHGVYLGKNYPYPL 824
>UniRef50_Q4E3Z7 Cluster: DNA photolyase, putative; n=4;
Trypanosoma|Rep: DNA photolyase, putative - Trypanosoma
cruzi
Length = 875
Score = 58.4 bits (135), Expect = 2e-07
Identities = 37/138 (26%), Positives = 58/138 (42%)
Frame = +3
Query: 66 GKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSV 245
G P+ DA M +L G++ H R A+A LTRG W G + + LD D +
Sbjct: 634 GLTGVPFADAAMRELLTTGFVAHEGRQALAWLLTRG-YGQDWRLGAEWLERCSLDYDPFL 692
Query: 246 NAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMAPE 425
G + + D G +++K++P L +P YIH P +
Sbjct: 693 CYGNFAYFSELILDDFGEPVRSVHWLAHHHDQTGIYVKKWLPLLSKIPPVYIHRPHVLTP 752
Query: 426 SVQAAAQCSIGRDYPMPM 479
+QA +G+ YP P+
Sbjct: 753 RMQAMHGVRLGKTYPYPL 770
>UniRef50_A3JAL3 Cluster: Deoxyribodipyrimidine photolyase; n=4;
Bacteria|Rep: Deoxyribodipyrimidine photolyase -
Marinobacter sp. ELB17
Length = 441
Score = 56.4 bits (130), Expect = 6e-07
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 1/101 (0%)
Frame = +3
Query: 66 GKPXYPWXDAIMIQLREEGWIHHLSRHAVA-CFLTRGDLWISWEEGMKVFDELLLDADWS 242
G YP +A M QLRE G+I + SR VA CF+ +L + W G F++ L+D D +
Sbjct: 322 GNTSYPLVNAAMNQLRETGYISNRSRQLVASCFI--NELELDWRYGAAWFEQQLIDYDVA 379
Query: 243 VNAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKY 365
N G W + + + ++ DPNG F+ ++
Sbjct: 380 SNYGNWQYLAGVGADPRGLRRFNLDKQAQQYDPNGTFVERW 420
>UniRef50_Q5IFN2 Cluster: Cryptochrome DASH,
chloroplast/mitochondrial precursor; n=5; Eukaryota|Rep:
Cryptochrome DASH, chloroplast/mitochondrial precursor -
Ostreococcus tauri
Length = 546
Score = 56.0 bits (129), Expect = 8e-07
Identities = 38/143 (26%), Positives = 61/143 (42%)
Frame = +3
Query: 66 GKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSV 245
G YP DA M +L G++ + R VA +L D I W G F+ LLD D +
Sbjct: 364 GTTGYPLIDANMRELAATGFMSNRGRQNVASWLAL-DAGIDWRHGADWFEHHLLDYDTAS 422
Query: 246 NAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMAPE 425
N G W + + + + DP G++I+ ++ L +P YI +P AP
Sbjct: 423 NWG--NWCAAAGMTGGRINRFNIAKQTKDYDPAGEYIKTWVKELAEVPAAYIADPNQAPR 480
Query: 426 SVQAAAQCSIGRDYPMPMVDHTK 494
++ + +P D T+
Sbjct: 481 ELRDRIGLNYPNKLALPRRDFTE 503
>UniRef50_Q14N08 Cluster: Putative deoxyribodipyrimidine photolyase
protein; n=1; Spiroplasma citri|Rep: Putative
deoxyribodipyrimidine photolyase protein - Spiroplasma
citri
Length = 435
Score = 55.6 bits (128), Expect = 1e-06
Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 1/110 (0%)
Frame = +3
Query: 66 GKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSV 245
G+ Y + DA M +L+E G +H+ +R A FL + +L I W +G + F + L+D D +
Sbjct: 305 GETGYDFIDAGMKELKETGLLHNRARMVCASFLVK-NLQIDWHKGEQYFAQQLIDYDPII 363
Query: 246 NAGMWMW-XXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPT 392
N W W + P +K DP + K+ LKN PT
Sbjct: 364 NQCSWQWVAGTGFDAQPFFRIFNPELQQKKYDPTSSYCNKF---LKNRPT 410
>UniRef50_Q84KJ5 Cluster: Cryptochrome DASH,
chloroplast/mitochondrial precursor; n=8;
Magnoliophyta|Rep: Cryptochrome DASH,
chloroplast/mitochondrial precursor - Arabidopsis
thaliana (Mouse-ear cress)
Length = 569
Score = 55.6 bits (128), Expect = 1e-06
Identities = 31/114 (27%), Positives = 50/114 (43%)
Frame = +3
Query: 69 KPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSVN 248
K YP DA M +L G++ + R V FL R D+ + W G + F+ LLD D N
Sbjct: 414 KTGYPLIDANMKELSTTGFMSNRGRQIVCSFLVR-DMGLDWRMGAEWFETCLLDYDPCSN 472
Query: 249 AGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEP 410
G W + + + + DP G+++ ++ L+ +P H P
Sbjct: 473 YGNWTYGAGVGNDPREDRYFSIPKQAQNYDPEGEYVAFWLQQLRRLPKEKRHWP 526
>UniRef50_A3JBH1 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Marinobacter sp. ELB17|Rep: Deoxyribodipyrimidine
photolyase - Marinobacter sp. ELB17
Length = 519
Score = 55.2 bits (127), Expect = 1e-06
Identities = 41/158 (25%), Positives = 72/158 (45%), Gaps = 2/158 (1%)
Frame = +3
Query: 63 RGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWS 242
+G +P+ DA M L + GWI+ R + F T +LWI + + LD +
Sbjct: 339 QGLTGFPYIDAAMRFLNQTGWINMRLRATLVSFATM-NLWIPTTKVAEYLATEFLDYEPG 397
Query: 243 VNAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMAP 422
++ + Y PV+ GR D +G FIRK++P L ++P +H+ +A
Sbjct: 398 IHHVIHQ-IIAGTTEFNELMVYDPVKQGRDHDLDGHFIRKWVPELADVPGSELHD--LAK 454
Query: 423 ESVQAAAQCSIG--RDYPMPMVDHTKASQINIERIKQV 530
+ + + Q I YP +VDH ++ +R+ +
Sbjct: 455 TAFRLSKQAEIRGYMPYPEAIVDHRATAKKAKDRVSDL 492
>UniRef50_A7P504 Cluster: Chromosome chr4 scaffold_6, whole genome
shotgun sequence; n=4; Magnoliophyta|Rep: Chromosome
chr4 scaffold_6, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 564
Score = 55.2 bits (127), Expect = 1e-06
Identities = 31/108 (28%), Positives = 49/108 (45%)
Frame = +3
Query: 66 GKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSV 245
G YP DA M +L G++ + R V FL R D+ I W G + F+ LLD D
Sbjct: 409 GCTGYPLIDANMKELSATGFMSNRGRQIVCSFLVR-DMGIDWRMGAEWFETCLLDYDPCS 467
Query: 246 NAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMP 389
N G W + + + + DP G+++ ++P L+ +P
Sbjct: 468 NYGNWTYGAGVGNDPREDRYFSIPKQAKTYDPEGEYVAFWLPELQALP 515
>UniRef50_Q4Q4G2 Cluster: Deoxyribodipyrimidine photolyase,
putative; n=3; Leishmania|Rep: Deoxyribodipyrimidine
photolyase, putative - Leishmania major
Length = 541
Score = 55.2 bits (127), Expect = 1e-06
Identities = 46/178 (25%), Positives = 73/178 (41%), Gaps = 14/178 (7%)
Frame = +3
Query: 36 RANQLQFRARGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFD 215
+A + G+ P DA + L GW H+ R ++ F + L I W E + F
Sbjct: 358 KAEHFEAFKEGRTGVPLVDAAVRCLTATGWCHNRCRLVISNFAVKV-LGIDWRECERWFA 416
Query: 216 ELLLDADWSVNAGMWMW-XXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPT 392
+ +D D + N G W+W + R + DP+ FI +++P L +P
Sbjct: 417 TVAVDYDVASNNGGWLWSSGQGADAQPYFRTFNAFRQSERFDPDCKFIFQWVPELAKVPP 476
Query: 393 RYIH--EPWMAPESVQAAAQCSIGR-----------DYPMPMVDHTKASQINIERIKQ 527
+H E + A +A A S R YP P+VD A++ IE K+
Sbjct: 477 SVVHHWEEYCAKARGRATATHSRKRSGQVKAKEYPTSYPAPIVDIKAATKAIIEEFKK 534
>UniRef50_Q97VY1 Cluster: Deoxyribodipyrimidine photolyase (DNA
photolyase) (Photoreactivating enzyme); n=5;
Sulfolobaceae|Rep: Deoxyribodipyrimidine photolyase (DNA
photolyase) (Photoreactivating enzyme) - Sulfolobus
solfataricus
Length = 433
Score = 54.4 bits (125), Expect = 3e-06
Identities = 39/126 (30%), Positives = 55/126 (43%), Gaps = 2/126 (1%)
Frame = +3
Query: 42 NQLQFRA--RGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFD 215
N+ F+A GK YP DA M QL G + + R A FL + L I W G K F
Sbjct: 276 NERLFQAWLEGKTGYPIIDAGMRQLNRTGDMPNRVRMLTAFFLVKV-LIIDWRIGEKYFA 334
Query: 216 ELLLDADWSVNAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTR 395
L+D D SVN G W W + P + DP +I++++ L++
Sbjct: 335 SKLIDYDPSVNNGNWQW-IASVGTDYIFRVFDPWKQQVTYDPEAKYIKRWVDELESYDAE 393
Query: 396 YIHEPW 413
IH +
Sbjct: 394 IIHNAY 399
>UniRef50_Q9KK82 Cluster: Hypothetical DNA photolyase; n=3;
Actinomycetales|Rep: Hypothetical DNA photolyase -
Brevibacterium linens
Length = 487
Score = 54.0 bits (124), Expect = 3e-06
Identities = 33/103 (32%), Positives = 48/103 (46%), Gaps = 1/103 (0%)
Frame = +3
Query: 66 GKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSV 245
G YP DA M QL + GW+H+ R A FLT+ +L W G + F + L+DAD +
Sbjct: 346 GTTGYPLIDAGMAQLWQTGWMHNRVRMVTASFLTK-NLLQHWWFGEQWFWDTLVDADEAN 404
Query: 246 NAGMWMW-XXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIP 371
N W W + P R + DP+ +I ++P
Sbjct: 405 NPVSWQWVAGSGADAAPYFRVFNPERQRERFDPDDAYIEDWLP 447
>UniRef50_Q1GUF7 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Sphingopyxis alaskensis|Rep: Deoxyribodipyrimidine
photolyase - Sphingopyxis alaskensis (Sphingomonas
alaskensis)
Length = 457
Score = 53.6 bits (123), Expect = 4e-06
Identities = 28/68 (41%), Positives = 37/68 (54%)
Frame = +3
Query: 63 RGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWS 242
RG+ YP DA M +L + GW+H+ R A FL + L I W G + F + LLDAD
Sbjct: 310 RGRTGYPVVDAGMRELWQTGWMHNRVRMVTASFLVK-HLLIDWRRGERWFWDTLLDADLG 368
Query: 243 VNAGMWMW 266
NA W +
Sbjct: 369 SNAMNWQY 376
>UniRef50_Q15ZK4 Cluster: Deoxyribodipyrimidine photolyase; n=2;
Alteromonadales|Rep: Deoxyribodipyrimidine photolyase -
Pseudoalteromonas atlantica (strain T6c / BAA-1087)
Length = 445
Score = 53.2 bits (122), Expect = 6e-06
Identities = 28/101 (27%), Positives = 49/101 (48%)
Frame = +3
Query: 63 RGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWS 242
+G+ YP +A M QL G++ + R VA L +L + W G F++ L+D D +
Sbjct: 326 QGETPYPIVNACMKQLNHTGYMSNRGRQLVASCLVN-ELGVDWRFGAAYFEQQLVDFDVA 384
Query: 243 VNAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKY 365
N G W + + + ++ DPNG+F+R++
Sbjct: 385 SNWGNWQYLSGVGVDPRGHRRFDLAKQAQQYDPNGEFVRQW 425
>UniRef50_Q6CSJ7 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome D of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome D of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 595
Score = 52.8 bits (121), Expect = 8e-06
Identities = 35/116 (30%), Positives = 57/116 (49%), Gaps = 1/116 (0%)
Frame = +3
Query: 66 GKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSV 245
G+ P DAIM+++ + G+I++ SR A FL + +L I W G + F + L+D D +
Sbjct: 459 GETGIPIVDAIMLKMLKTGYINNRSRMITASFLAK-NLLIDWRWGERWFRKHLIDYDTAS 517
Query: 246 NAGMWMWXXXXXXXXXXXHCYCPVRF-GRKTDPNGDFIRKYIPALKNMPTRYIHEP 410
N G W + ++ K DP G FIR ++ +N + +HEP
Sbjct: 518 NVGGWGFCASTGIDCQPYFRVFNMKLQSEKYDPEGKFIRHWLENDEN-DSDNVHEP 572
>UniRef50_UPI0000E0FEC6 Cluster: deoxyribodipyrimidine photolyase,
putative; n=1; alpha proteobacterium HTCC2255|Rep:
deoxyribodipyrimidine photolyase, putative - alpha
proteobacterium HTCC2255
Length = 501
Score = 52.0 bits (119), Expect = 1e-05
Identities = 37/153 (24%), Positives = 67/153 (43%), Gaps = 1/153 (0%)
Frame = +3
Query: 66 GKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSV 245
G P DA M + G+I+ R + L+ + W G+K LD + +
Sbjct: 326 GTTGIPIVDANMRAVIATGYINFRMRAMLVSVLSH-HFNLDWRLGVKHLAAQFLDFEPGI 384
Query: 246 NAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPW-MAP 422
+ + Y P++ ++ DP G FI++++P L+ P +H PW ++P
Sbjct: 385 HYPQFQMQAGVTGTNTI-RLYNPIKQSQEKDPQGRFIKQWVPELREYPDDMVHTPWAISP 443
Query: 423 ESVQAAAQCSIGRDYPMPMVDHTKASQINIERI 521
Q G +YP P+VD A+++ +R+
Sbjct: 444 MERQLFGIDEAG-EYPTPVVDIEDAAKMARDRL 475
>UniRef50_Q9KS67 Cluster: Cryptochrome-like protein cry2; n=15;
Gammaproteobacteria|Rep: Cryptochrome-like protein cry2
- Vibrio cholerae
Length = 504
Score = 51.2 bits (117), Expect = 2e-05
Identities = 37/163 (22%), Positives = 66/163 (40%)
Frame = +3
Query: 39 ANQLQFRARGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDE 218
A QL G P DA M L + G+++ R + LT + + W G+ +
Sbjct: 305 AAQLAAWQTGHTGIPLVDACMRCLIQTGYLNFRMRAMLVSVLTH-HMNVDWRAGVTYLAQ 363
Query: 219 LLLDADWSVNAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRY 398
L LD + ++ + Y P + ++ D G FI K++P L +P
Sbjct: 364 LFLDFEPGIHYPQFQMQAGVTGTNTI-RIYNPTKQAQEHDSEGQFIHKWVPELAQVPVPL 422
Query: 399 IHEPWMAPESVQAAAQCSIGRDYPMPMVDHTKASQINIERIKQ 527
+ EPW+ Q + Y P++D +++ +R+ Q
Sbjct: 423 LFEPWLMTPLEAQMYQVPLESPYLKPVMDLEASAKQARDRLWQ 465
>UniRef50_P61496 Cluster: Deoxyribodipyrimidine photo-lyase; n=2;
Thermus thermophilus|Rep: Deoxyribodipyrimidine
photo-lyase - Thermus thermophilus (strain HB27 / ATCC
BAA-163 / DSM 7039)
Length = 420
Score = 50.4 bits (115), Expect = 4e-05
Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Frame = +3
Query: 54 FRA--RGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLL 227
FRA G+ P DA M +L G++ + +R A F + L + W+ + F LLL
Sbjct: 282 FRAWYEGRTGVPLVDAAMRELHATGFLSNRARMNAAQFAVK-HLLLPWKRCEEAFRHLLL 340
Query: 228 DADWSVNAGMWMW-XXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIP 371
D D +VN W W + PV G + DP G +++++ P
Sbjct: 341 DGDRAVNLQGWQWAGGLGVDAAPYFRVFNPVLQGERHDPEGRWLKRWAP 389
>UniRef50_Q41DS7 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Exiguobacterium sibiricum 255-15|Rep:
Deoxyribodipyrimidine photolyase - Exiguobacterium
sibiricum 255-15
Length = 400
Score = 49.6 bits (113), Expect = 7e-05
Identities = 28/101 (27%), Positives = 48/101 (47%)
Frame = +3
Query: 66 GKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSV 245
G+ P+ DA M ++++ GW+ + R A +L DL W G + F++ L+D D +
Sbjct: 295 GETGEPFVDAFMREIKDTGWMSNRGRQITASYLIH-DLKQDWRIGARYFEQQLIDYDVAS 353
Query: 246 NAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYI 368
N G W + + P +K DPN IR+++
Sbjct: 354 NYGNWAYIAGVGNATRTPR-FNPEFQQQKYDPNRALIRRWM 393
>UniRef50_A6CY79 Cluster: Deoxyribodipyrimidine photolyase; n=3;
Vibrio|Rep: Deoxyribodipyrimidine photolyase - Vibrio
shilonii AK1
Length = 472
Score = 49.6 bits (113), Expect = 7e-05
Identities = 33/114 (28%), Positives = 50/114 (43%)
Frame = +3
Query: 24 LTQRRANQLQFRARGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGM 203
LT A++L+ G +P +A M QLRE G++ + R VA L +L + W G
Sbjct: 339 LTTFYASRLRQWVEGNTPFPIVNACMNQLRETGYMSNRGRQLVASCLVH-ELSLDWRYGA 397
Query: 204 KVFDELLLDADWSVNAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKY 365
F +L+D D N G W + + + + DP FIRK+
Sbjct: 398 CYFQHMLIDYDVGSNWGNWQYLAGVGADPRGNRKFDLDKQSQLYDPESVFIRKW 451
>UniRef50_A1IU21 Cluster: Deoxyribodopyrimidine photolyase; n=3;
Neisseria|Rep: Deoxyribodopyrimidine photolyase -
Neisseria meningitidis serogroup A
Length = 433
Score = 49.6 bits (113), Expect = 7e-05
Identities = 35/117 (29%), Positives = 49/117 (41%)
Frame = +3
Query: 63 RGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWS 242
+G+ P DA M L + G +H R A F L + EG F L D D +
Sbjct: 304 QGRTGIPIIDAAMRCLHKTGSLHPALRRLSADFFCHV-LNLPRREGEIWFARQLTDFDAA 362
Query: 243 VNAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPW 413
+N G W C KTDP+G F+R++IP L ++ +H PW
Sbjct: 363 INQGNWRLAASRHT------CPDIAAAAHKTDPDGTFVRRHIPELAHLSADTVHTPW 413
>UniRef50_Q5LS53 Cluster: Deoxyribodipyrimidine photolyase; n=25;
Proteobacteria|Rep: Deoxyribodipyrimidine photolyase -
Silicibacter pomeroyi
Length = 481
Score = 48.8 bits (111), Expect = 1e-04
Identities = 32/112 (28%), Positives = 49/112 (43%), Gaps = 1/112 (0%)
Frame = +3
Query: 63 RGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWS 242
RG+ P DA M ++ G +H+ +R A +LT+ L + W+ GM F + L D D +
Sbjct: 319 RGRTGVPLVDAAMREMYVTGRMHNRARMIAASYLTK-HLMVHWKLGMDWFADCLTDWDPA 377
Query: 243 VNAGMWMW-XXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTR 395
NA W W + P +K DP G + +I + P R
Sbjct: 378 ANAMGWQWVAGCGPDAAPYFRIFNPETQAKKFDPKGRYRNHWIAEGQAEPPR 429
>UniRef50_A4CAK2 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Pseudoalteromonas tunicata D2|Rep: Deoxyribodipyrimidine
photolyase - Pseudoalteromonas tunicata D2
Length = 437
Score = 48.8 bits (111), Expect = 1e-04
Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 1/98 (1%)
Frame = +3
Query: 66 GKPXYPWXDAIMIQLREEGWIHHLSRHAVA-CFLTRGDLWISWEEGMKVFDELLLDADWS 242
G YP +A+M +L E GW+ + R VA CF+ +L + W G F++ L+D D
Sbjct: 317 GSTPYPLVNALMRELNETGWMSNRGRQIVASCFV--NELELDWRYGAAYFEQRLIDYDVG 374
Query: 243 VNAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFI 356
N G W + + + DPN F+
Sbjct: 375 SNWGNWQYLAGVGPDPRGGRHFHIKKQAALYDPNNAFV 412
>UniRef50_A1SV39 Cluster: DNA photolyase, FAD-binding-domain
protein; n=1; Psychromonas ingrahamii 37|Rep: DNA
photolyase, FAD-binding-domain protein - Psychromonas
ingrahamii (strain 37)
Length = 448
Score = 48.8 bits (111), Expect = 1e-04
Identities = 29/101 (28%), Positives = 46/101 (45%)
Frame = +3
Query: 66 GKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSV 245
G Y +A M +LR+ G++ + R VA L +L + W G F+E L+D D +V
Sbjct: 324 GNTPYSLVNAFMHELRQTGYLSNRGRQIVASCLVN-ELSVDWRYGAAWFEEQLIDYDAAV 382
Query: 246 NAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYI 368
N G W + + + DPNGD+ ++I
Sbjct: 383 NWGNWQYIAGVGVDPRGGRHFNIEKQTTLYDPNGDYQAQWI 423
>UniRef50_Q5QXE0 Cluster: Cryptochrome DASH; n=4;
Gammaproteobacteria|Rep: Cryptochrome DASH - Idiomarina
loihiensis
Length = 449
Score = 48.4 bits (110), Expect = 2e-04
Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 1/109 (0%)
Frame = +3
Query: 66 GKPXYPWXDAIMIQLREEGWIHHLSRHAVA-CFLTRGDLWISWEEGMKVFDELLLDADWS 242
G YP +A M QL G++ + R VA CF+ +L + W G F++ L+D D S
Sbjct: 331 GNTPYPIVNACMKQLNATGYMSNRGRQLVASCFVH--ELSLDWRYGAAYFEQQLIDYDVS 388
Query: 243 VNAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMP 389
N G W + + + + DP+ +FI ++ L P
Sbjct: 389 SNWGNWQYLAGVGADPRGHRQFNLEKQTERYDPDNEFIERWAGDLSGQP 437
>UniRef50_A0Y3K3 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Alteromonadales bacterium TW-7|Rep:
Deoxyribodipyrimidine photolyase - Alteromonadales
bacterium TW-7
Length = 436
Score = 47.6 bits (108), Expect = 3e-04
Identities = 27/81 (33%), Positives = 40/81 (49%)
Frame = +3
Query: 24 LTQRRANQLQFRARGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGM 203
LT N+ +G YP +AIM +L G+I + SR VA L +L + W G
Sbjct: 304 LTTFMPNRFAAWCQGTTPYPLVNAIMKELNATGFITNRSRQIVASCLVN-ELGLDWRYGA 362
Query: 204 KVFDELLLDADWSVNAGMWMW 266
F++ L+D D + N G W +
Sbjct: 363 AYFEQQLIDHDVAANWGNWQY 383
>UniRef50_UPI0000E0FEEE Cluster: Deoxyribodipyrimidine photolyase;
n=1; alpha proteobacterium HTCC2255|Rep:
Deoxyribodipyrimidine photolyase - alpha proteobacterium
HTCC2255
Length = 441
Score = 46.8 bits (106), Expect = 5e-04
Identities = 29/98 (29%), Positives = 47/98 (47%), Gaps = 1/98 (1%)
Frame = +3
Query: 66 GKPXYPWXDAIMIQLREEGWIHHLSRHAVA-CFLTRGDLWISWEEGMKVFDELLLDADWS 242
G YP +A M QL+ G++ + R VA CF+ +L + W+ G F+E L+D D +
Sbjct: 336 GDTAYPIINACMRQLKYTGFMSNRGRQLVASCFIH--ELGLDWQYGAAYFEEALIDFDPA 393
Query: 243 VNAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFI 356
N G W + + + + DP+G+FI
Sbjct: 394 SNWGNWQYLAGVGSDPRGCRQFNLNKQTQTYDPHGEFI 431
>UniRef50_P05066 Cluster: Deoxyribodipyrimidine photo-lyase,
mitochondrial precursor; n=2; Saccharomyces
cerevisiae|Rep: Deoxyribodipyrimidine photo-lyase,
mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 565
Score = 46.8 bits (106), Expect = 5e-04
Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 1/105 (0%)
Frame = +3
Query: 66 GKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSV 245
G P DAIM +L G+I++ SR A FL++ +L I W G + F + L+D D S
Sbjct: 429 GNTGIPIVDAIMRKLLYTGYINNRSRMITASFLSK-NLLIDWRWGERWFMKHLIDGDSSS 487
Query: 246 NAGMWMWXXXXXXXXXXXHCYCPVRF-GRKTDPNGDFIRKYIPAL 377
N G W + + +K DP F+++++P L
Sbjct: 488 NVGGWGFCSSTGIDAQPYFRVFNMDIQAKKYDPQMIFVKQWVPEL 532
>UniRef50_A4A625 Cluster: Deoxyribodipyrimidine photolyase; n=2;
unclassified Gammaproteobacteria|Rep:
Deoxyribodipyrimidine photolyase - Congregibacter
litoralis KT71
Length = 434
Score = 46.4 bits (105), Expect = 7e-04
Identities = 28/100 (28%), Positives = 42/100 (42%)
Frame = +3
Query: 66 GKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSV 245
G +P +A+M QL GW+ + R A L D I W G F++ L+D D
Sbjct: 312 GDTNHPLVNALMHQLVATGWMSNRGRQIAASCLIH-DFGIDWRYGAAFFEKHLIDYDVGS 370
Query: 246 NAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKY 365
N G W + + + + DP+G FI K+
Sbjct: 371 NYGNWQYIAGVGADPRGGRAFNIEKQTAQYDPDGVFIAKW 410
>UniRef50_Q0UKK2 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 677
Score = 45.6 bits (103), Expect = 0.001
Identities = 30/112 (26%), Positives = 53/112 (47%)
Frame = +3
Query: 51 QFRARGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLD 230
+FR+ G+ DA +L G+ + +R VA FL+ L I W G + ++ LL+D
Sbjct: 449 RFRS-GRTGVGLIDASNRELFCTGYTSNRARQNVASFLS-SHLDIDWRIGAEWYEMLLID 506
Query: 231 ADWSVNAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNM 386
D + N G W + + PV+ D G++I+ ++P L+ +
Sbjct: 507 YDVASNWGNWQYVAGVGNDPRQGRIFNPVKQAFDYDGKGEYIKAWVPELRQL 558
>UniRef50_Q9KR33 Cluster: Cryptochrome DASH; n=22;
Gammaproteobacteria|Rep: Cryptochrome DASH - Vibrio
cholerae
Length = 461
Score = 45.6 bits (103), Expect = 0.001
Identities = 28/106 (26%), Positives = 47/106 (44%)
Frame = +3
Query: 48 LQFRARGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLL 227
LQ++ G+ +P +A M QL + G++ + R VA L +L + W G F+ L+
Sbjct: 314 LQWK-HGETPFPIVNACMRQLNQTGYMSNRGRQLVASCLVH-ELGLDWRYGAAYFETQLV 371
Query: 228 DADWSVNAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKY 365
D D N G W + + + DP G+F+ K+
Sbjct: 372 DYDVGSNWGNWQYLAGVGADPRGSRQFNLEKQAHTYDPKGEFVAKW 417
>UniRef50_Q1MZA5 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Oceanobacter sp. RED65|Rep: Deoxyribodipyrimidine
photolyase - Oceanobacter sp. RED65
Length = 440
Score = 44.4 bits (100), Expect = 0.003
Identities = 23/67 (34%), Positives = 34/67 (50%)
Frame = +3
Query: 66 GKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSV 245
G +P +A M QLR G++ + R VA L +L + W G + F+ LLD D +
Sbjct: 320 GHTEWPLVNACMNQLRTTGYMSNRGRQIVASCLLN-ELKVDWRAGAQAFEHYLLDYDVAA 378
Query: 246 NAGMWMW 266
N G W +
Sbjct: 379 NWGNWQY 385
>UniRef50_A7R122 Cluster: Chromosome undetermined scaffold_334,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_334, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 200
Score = 44.0 bits (99), Expect = 0.004
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = +3
Query: 336 DPNGDFIRKYIPALKNMPTRYIHEPWMAPESV 431
DP G+++R ++P L +PT +IH PW AP +V
Sbjct: 130 DPEGEYVRHWLPELARVPTEWIHHPWDAPFTV 161
>UniRef50_A7QH40 Cluster: Chromosome chr3 scaffold_95, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr3 scaffold_95, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 161
Score = 44.0 bits (99), Expect = 0.004
Identities = 16/40 (40%), Positives = 27/40 (67%)
Frame = +3
Query: 336 DPNGDFIRKYIPALKNMPTRYIHEPWMAPESVQAAAQCSI 455
DP G+++R ++P L +PT IH PW AP +V +++ S+
Sbjct: 23 DPEGEYVRHWLPELARVPTELIHHPWDAPFTVLKSSRGSL 62
>UniRef50_Q6NKC0 Cluster: Putative riboflavin biosynthesis protein;
n=1; Corynebacterium diphtheriae|Rep: Putative
riboflavin biosynthesis protein - Corynebacterium
diphtheriae
Length = 446
Score = 42.3 bits (95), Expect = 0.011
Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 1/105 (0%)
Frame = +3
Query: 66 GKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSV 245
G+ DA M +L G +H+ R A L + +L I W G + F + L+DAD +
Sbjct: 315 GRTGIALVDAGMRELWATGTMHNRVRMVAASLLVK-NLGIHWRHGEQWFWDTLVDADPAS 373
Query: 246 NAGMWMW-XXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPAL 377
N W W + P R+ DP+G + +++P +
Sbjct: 374 NPFNWQWVAGSGDDAAPYFRIFNPDTQARRFDPDGTYRTRWLPIM 418
>UniRef50_A4WX50 Cluster: Deoxyribodipyrimidine photo-lyase; n=3;
Rhodobacter sphaeroides|Rep: Deoxyribodipyrimidine
photo-lyase - Rhodobacter sphaeroides ATCC 17025
Length = 455
Score = 42.3 bits (95), Expect = 0.011
Identities = 25/82 (30%), Positives = 40/82 (48%)
Frame = +3
Query: 312 PVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMAPESVQAAAQCSIGRDYPMPMVDHT 491
P+ DP G F R+++P L ++P ++ PW A+ +GR YP P+VD
Sbjct: 357 PLGLAAALDPEGAFTRRWLPELADVPDLFLQAPWR-----WEGARQLLGRRYPEPLVD-- 409
Query: 492 KASQINIERIKQVYAQLARYKP 557
A+ I R + V + R +P
Sbjct: 410 PATAIREARRRLVLSMPDRLEP 431
>UniRef50_A3Y1I2 Cluster: Deoxyribodipyrimidine photolyase; n=3;
Vibrionales|Rep: Deoxyribodipyrimidine photolyase -
Vibrio sp. MED222
Length = 466
Score = 41.5 bits (93), Expect = 0.019
Identities = 23/67 (34%), Positives = 31/67 (46%)
Frame = +3
Query: 66 GKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSV 245
G YP DA M QL G++ + R A L +L I W G F+ L+D D +
Sbjct: 337 GNTNYPIVDACMRQLNTTGYMSNRGRQLAASCLIY-ELGIDWRHGAAYFESQLIDYDVAS 395
Query: 246 NAGMWMW 266
N G W +
Sbjct: 396 NWGNWAY 402
>UniRef50_Q11W86 Cluster: Deoxyribodipyrimidine photolyase; n=2;
Bacteroidetes|Rep: Deoxyribodipyrimidine photolyase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 434
Score = 41.1 bits (92), Expect = 0.025
Identities = 22/67 (32%), Positives = 33/67 (49%)
Frame = +3
Query: 66 GKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSV 245
GK + DA M++L G++ + R A +L DL I W G F++ L+D D
Sbjct: 329 GKTGNDFIDANMLELTHTGFMSNRGRQNAASYLCN-DLGIDWRYGAAYFEQQLIDYDVCS 387
Query: 246 NAGMWMW 266
N G W +
Sbjct: 388 NWGNWAY 394
>UniRef50_Q7SI68 Cluster: Putative cryptochrome DASH, mitochondrial
precursor; n=3; Sordariomycetes|Rep: Putative
cryptochrome DASH, mitochondrial precursor - Neurospora
crassa
Length = 745
Score = 40.7 bits (91), Expect = 0.034
Identities = 28/112 (25%), Positives = 48/112 (42%), Gaps = 2/112 (1%)
Frame = +3
Query: 90 DAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSVNAGMWMW- 266
DA +L G+ + +R VA FL + L I W G + ++ LL+D D S N W +
Sbjct: 429 DASQRELIHTGYTSNRTRQNVASFLAK-HLEIDWRYGAEWYEMLLVDYDVSSNWANWQYV 487
Query: 267 XXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPT-RYIHEPWMA 419
+ PV+ D +G ++R ++P + + + W A
Sbjct: 488 AGVGNDPRGAARIFNPVKQAFDYDKDGTYVRTWVPEVAKFENLENVFQAWTA 539
>UniRef50_A0HIH4 Cluster: DNA photolyase, FAD-binding; n=1;
Comamonas testosteroni KF-1|Rep: DNA photolyase,
FAD-binding - Comamonas testosteroni KF-1
Length = 431
Score = 39.5 bits (88), Expect = 0.078
Identities = 25/90 (27%), Positives = 37/90 (41%)
Frame = +3
Query: 90 DAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSVNAGMWMWX 269
DA M +L G++ + R A +L DL W G F+ LLD D N G W++
Sbjct: 338 DAAMRELAATGYLGNRLRQVAASYLIH-DLGCDWRAGAAWFESQLLDYDVYSNQGNWLYI 396
Query: 270 XXXXXXXXXXHCYCPVRFGRKTDPNGDFIR 359
+ PV+ D +G + R
Sbjct: 397 AGRGTDPQGGRRFDPVKQAATYDADGAYQR 426
>UniRef50_Q1G0Y2 Cluster: Cryptochrome dash; n=1; Karenia
brevis|Rep: Cryptochrome dash - Karenia brevis
(Dinoflagellate)
Length = 523
Score = 39.1 bits (87), Expect = 0.10
Identities = 21/58 (36%), Positives = 31/58 (53%)
Frame = +3
Query: 90 DAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSVNAGMWM 263
DA M++L GW+ + R VA +L ++ + W G F+E LLD D N G W+
Sbjct: 367 DANMLELLATGWMSNRGRQNVASYLIF-NMRVDWRYGAAHFEEHLLDYDPCSNWGNWV 423
>UniRef50_Q4I1Q6 Cluster: Putative cryptochrome DASH; n=1;
Gibberella zeae|Rep: Putative cryptochrome DASH -
Gibberella zeae (Fusarium graminearum)
Length = 678
Score = 39.1 bits (87), Expect = 0.10
Identities = 27/108 (25%), Positives = 48/108 (44%)
Frame = +3
Query: 63 RGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWS 242
RG DA +L+ G+ + +R VA +LT+ L I W G + +++ L+D D
Sbjct: 393 RGTTGMGLVDASQRELQLTGYTSNRARQNVASYLTKS-LGIDWRLGAEYYEQSLIDYDTH 451
Query: 243 VNAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNM 386
N G W + + V+ D +G F R ++ +K++
Sbjct: 452 SNWGNWQY-QASCGNDPRSRSFNQVKQAFDYDQDGRFTRTWVNEVKSI 498
>UniRef50_A6EG08 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Pedobacter sp. BAL39|Rep: Deoxyribodipyrimidine
photolyase - Pedobacter sp. BAL39
Length = 410
Score = 38.7 bits (86), Expect = 0.14
Identities = 21/61 (34%), Positives = 30/61 (49%)
Frame = +3
Query: 78 YPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSVNAGM 257
YP D M +L + G+I + R VA +L L + W G F+E L+D + N G
Sbjct: 315 YPLIDNYMTELNDTGYISYTGRLVVATYLVH-FLKVHWTNGAVYFEEKLIDYAPASNWGN 373
Query: 258 W 260
W
Sbjct: 374 W 374
>UniRef50_A6S5S9 Cluster: Putative uncharacterized protein; n=2;
Sclerotiniaceae|Rep: Putative uncharacterized protein -
Botryotinia fuckeliana B05.10
Length = 651
Score = 38.7 bits (86), Expect = 0.14
Identities = 24/100 (24%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Frame = +3
Query: 90 DAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSVNAGMWMW- 266
DA + G+ + +R VA FL + L+I W G + ++ +L+D D S N G W +
Sbjct: 422 DASQRECYHTGYTSNRARQNVASFLAK-HLYIDWRIGAEWYECMLVDYDVSSNWGNWQYV 480
Query: 267 XXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNM 386
+ PV+ DP +++ ++ L+ +
Sbjct: 481 AGVGNDPRGNDRIFNPVKQAFDYDPKAEYVLAWVDELRGV 520
>UniRef50_A4CPD0 Cluster: Deoxyribodipyrimidine photolyase; n=4;
Flavobacteria|Rep: Deoxyribodipyrimidine photolyase -
Robiginitalea biformata HTCC2501
Length = 515
Score = 38.3 bits (85), Expect = 0.18
Identities = 22/68 (32%), Positives = 34/68 (50%)
Frame = +3
Query: 63 RGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWS 242
+G+ + +A M +LR GW+ + R A + ++ D+ W G F LLLD D
Sbjct: 371 QGETDSDFINANMQELRLTGWMSNRGRQNTASYWSQ-DMGQDWRLGAAWFQYLLLDYDVH 429
Query: 243 VNAGMWMW 266
N G WM+
Sbjct: 430 SNWGNWMY 437
>UniRef50_A2QZX5 Cluster: Contig An12c0190, complete genome; n=2;
Trichocomaceae|Rep: Contig An12c0190, complete genome -
Aspergillus niger
Length = 736
Score = 37.9 bits (84), Expect = 0.24
Identities = 32/110 (29%), Positives = 46/110 (41%), Gaps = 4/110 (3%)
Frame = +1
Query: 382 TCQRATYTSRGWPRSLCRRPPSAASDVTTPCRWSTTPRPRR*ISNGSNRSTHN---SPDI 552
T +R TY + R R PSA+S P ++ P ++ S RST + SP
Sbjct: 51 TSRRGTYDRTSFRRQTVRTAPSASSTSPPPTLQPSSQVPEAILTASSTRSTASSVRSPVQ 110
Query: 553 SLKLR*MLMQSSXPTCLPAVXQSXINNRQXQPXQLSXAAKL-RXPQNAPS 699
L R + + + P A + I + QP A L R P +APS
Sbjct: 111 GLPSRQFVSEENRPNSTFAADRPEIISNMEQPVSDPHAVDLTRPPDSAPS 160
>UniRef50_Q0C4R4 Cluster: Putative uncharacterized protein; n=1;
Hyphomonas neptunium ATCC 15444|Rep: Putative
uncharacterized protein - Hyphomonas neptunium (strain
ATCC 15444)
Length = 182
Score = 37.5 bits (83), Expect = 0.31
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +1
Query: 409 RGWPRSLCRRPPSAASDVTTPCRWSTTPRPR 501
R WP S R PSA+S P RW+ +PRPR
Sbjct: 103 RVWPASASRGQPSASSPPGAPRRWTQSPRPR 133
>UniRef50_A4BCW2 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Reinekea sp. MED297|Rep: Deoxyribodipyrimidine
photolyase - Reinekea sp. MED297
Length = 433
Score = 37.5 bits (83), Expect = 0.31
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = +3
Query: 51 QFRARGKPXYPWX--DAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELL 224
+FR + PW +A M QL+E G++ + R A L +L + W G F+ L
Sbjct: 306 RFRNWREGNTPWAIVNACMRQLKETGYLSNRGRQIAASALVN-ELALDWRYGAAWFEYCL 364
Query: 225 LDADWSVNAGMWMW 266
+D D + N G W +
Sbjct: 365 VDYDVASNWGNWQY 378
>UniRef50_A4B8N9 Cluster: Deoxyribodipyrimidine photolyase,
putative; n=1; Alteromonas macleodii 'Deep ecotype'|Rep:
Deoxyribodipyrimidine photolyase, putative - Alteromonas
macleodii 'Deep ecotype'
Length = 451
Score = 36.7 bits (81), Expect = 0.55
Identities = 26/99 (26%), Positives = 40/99 (40%)
Frame = +3
Query: 66 GKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSV 245
G+ YP DA M LR+ G+++ R V FL L + W + LD + +
Sbjct: 355 GQTGYPLVDACMRALRQTGYLNFRMRAMVTSFLCH-HLNVHWIKAAHYLATQFLDFEPGI 413
Query: 246 NAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRK 362
+ + Y P +K DP G+FI+K
Sbjct: 414 HYPQ-IQMQASVTGIHTVRLYNPASQSKKLDPEGEFIKK 451
>UniRef50_Q67G26 Cluster: Membrane transport protein; n=2;
Actinomycetales|Rep: Membrane transport protein -
Streptomyces griseoruber
Length = 505
Score = 36.3 bits (80), Expect = 0.72
Identities = 21/51 (41%), Positives = 24/51 (47%)
Frame = +1
Query: 382 TCQRATYTSRGWPRSLCRRPPSAASDVTTPCRWSTTPRPRR*ISNGSNRST 534
TC SR W RRPPS S C WST+P PR + S+ ST
Sbjct: 22 TCIETLGRSRAW---CWRRPPSPNSSSPWTCPWSTSPCPRSVLPWDSHHST 69
>UniRef50_Q947B4 Cluster: Cryptochrome 1a; n=7; Poaceae|Rep:
Cryptochrome 1a - Hordeum vulgare (Barley)
Length = 61
Score = 36.3 bits (80), Expect = 0.72
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +3
Query: 216 ELLLDADWSVNAGMWMWXXXXXXXXXXX-HCYCPVRFGRKTDPNGDFIRKYIPALKNMPT 392
+ LLDAD +A W + H P G K DP+G+++R+++P L +PT
Sbjct: 1 DTLLDADLESDALGWQYISGSLPDSRELDHIDNPQLEGYKFDPHGEYVRRWLPELARLPT 60
>UniRef50_A5GIC8 Cluster: FAD binding domain of DNA photolyase;
n=20; Bacteria|Rep: FAD binding domain of DNA photolyase
- Synechococcus sp. (strain WH7803)
Length = 340
Score = 35.9 bits (79), Expect = 0.96
Identities = 20/67 (29%), Positives = 29/67 (43%)
Frame = +3
Query: 66 GKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSV 245
G+ D L GW+H+ +R +A +L + W+ G F E LLD D +
Sbjct: 195 GRTGLACMDGFRDDLVSSGWLHNHARMWMAAYLVHWRR-VHWKAGADWFLEHLLDGDPAS 253
Query: 246 NAGMWMW 266
N W W
Sbjct: 254 NHLSWQW 260
>UniRef50_A0M4X6 Cluster: Cryptochrome-like DNA photolyase family
protein; n=6; Flavobacteriales|Rep: Cryptochrome-like
DNA photolyase family protein - Gramella forsetii
(strain KT0803)
Length = 438
Score = 35.9 bits (79), Expect = 0.96
Identities = 20/67 (29%), Positives = 32/67 (47%)
Frame = +3
Query: 66 GKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSV 245
G Y + +A M ++ G++ + R V F + +L W G F+ LL+D D
Sbjct: 338 GNTKYDFVNANMREISNTGFMSNRGRQNVNSFWAK-ELKQDWRIGAAYFESLLIDYDVHS 396
Query: 246 NAGMWMW 266
N G WM+
Sbjct: 397 NWGNWMY 403
>UniRef50_Q4PJE0 Cluster: Predicted deoxyribodipyrimidine
photolyase; n=3; environmental samples|Rep: Predicted
deoxyribodipyrimidine photolyase - uncultured bacterium
MedeBAC46A06
Length = 287
Score = 35.5 bits (78), Expect = 1.3
Identities = 20/69 (28%), Positives = 33/69 (47%)
Frame = +3
Query: 60 ARGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADW 239
A G+ D + L E G++H+ +R +A + +SW+ G + F L+DAD
Sbjct: 165 AAGETGVACIDQFIATLVETGYLHNHARMYLAAYTVHWRR-VSWQAGARWFLGHLIDADP 223
Query: 240 SVNAGMWMW 266
+ N W W
Sbjct: 224 ASNNLSWQW 232
>UniRef50_UPI0001555137 Cluster: PREDICTED: hypothetical protein,
partial; n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
hypothetical protein, partial - Ornithorhynchus anatinus
Length = 293
Score = 35.1 bits (77), Expect = 1.7
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = +1
Query: 379 RTCQRATYTSRGWPRSLCRRPPSAASDVTTPCRWSTTPRPRR 504
R+ +RA+ TS WPR + AS T+P R TTPR R
Sbjct: 44 RSIRRASQTSSSWPRRSSQPEGLPASSKTSPPRKETTPRGSR 85
>UniRef50_A2C3R3 Cluster: DNA photolyase-like protein; n=2;
Prochlorococcus marinus|Rep: DNA photolyase-like protein
- Prochlorococcus marinus (strain NATL1A)
Length = 371
Score = 34.7 bits (76), Expect = 2.2
Identities = 20/67 (29%), Positives = 32/67 (47%)
Frame = +3
Query: 66 GKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSV 245
GK D + +LRE ++H+ +R A L + W+ G ++F + LLD D +
Sbjct: 111 GKTGIDCFDTWIEELRENNYLHNHARMWFASIWIF-TLGLPWQLGARLFMKHLLDGDAAS 169
Query: 246 NAGMWMW 266
N W W
Sbjct: 170 NTLSWRW 176
>UniRef50_A4GI46 Cluster: Deoxyribodipyrimidine photolyase; n=2;
Bacteria|Rep: Deoxyribodipyrimidine photolyase -
uncultured marine bacterium EB0_41B09
Length = 424
Score = 34.3 bits (75), Expect = 2.9
Identities = 20/67 (29%), Positives = 33/67 (49%)
Frame = +3
Query: 66 GKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSV 245
G+ + +A M +L+E G++ + R VA +L +L W G F+ L+D D S
Sbjct: 325 GRTASNFINAGMKELKETGFLSNRMRQIVASYLVN-ELSCDWRAGAAWFESQLIDYDVSS 383
Query: 246 NAGMWMW 266
N W +
Sbjct: 384 NHCNWAY 390
>UniRef50_Q6SFP7 Cluster: Deoxyribodipyrimidine photolyase family
protein; n=1; uncultured bacterium 580|Rep:
Deoxyribodipyrimidine photolyase family protein -
uncultured bacterium 580
Length = 478
Score = 33.9 bits (74), Expect = 3.9
Identities = 29/114 (25%), Positives = 46/114 (40%)
Frame = +3
Query: 60 ARGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADW 239
A G+ YP DA M L++ G+++ R V F + I W+ K L LD +
Sbjct: 307 ANGETGYPLIDASMRALKKTGYLNFRMRAMVVSFACHYFM-IHWKLVAKHLATLFLDFEP 365
Query: 240 SVNAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYI 401
++ + Y P + + DP+ FIR +I L + YI
Sbjct: 366 GIHYPQ-IQMQAGVTGINTIRIYNPSKQLQDHDPDTKFIRDWIDELSDQDKEYI 418
>UniRef50_A6GLE5 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Limnobacter sp. MED105|Rep: Deoxyribodipyrimidine
photolyase - Limnobacter sp. MED105
Length = 453
Score = 33.9 bits (74), Expect = 3.9
Identities = 20/102 (19%), Positives = 46/102 (45%)
Frame = +3
Query: 66 GKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSV 245
G+ + + DA L++ GW++ +R + F L + W+ + LD + ++
Sbjct: 320 GRTGFAYIDACQHFLQQTGWLNMRARATLVSFACV-QLGLPWQPVALYLAQQFLDFEPAI 378
Query: 246 NAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIP 371
+ G + Y P++ + DP G+F+++++P
Sbjct: 379 HYGQ-VRIASGTSHFSQMLVYDPLKQQAEQDPKGEFVKRWLP 419
>UniRef50_A0VAK1 Cluster: Uncharacterized protein UPF0065 precursor;
n=1; Delftia acidovorans SPH-1|Rep: Uncharacterized
protein UPF0065 precursor - Delftia acidovorans SPH-1
Length = 743
Score = 33.1 bits (72), Expect = 6.7
Identities = 19/37 (51%), Positives = 20/37 (54%)
Frame = +2
Query: 386 ANALHTRAVDGPGVCAGGRPVQHRT*LPHADGRPHQG 496
A AL RAV G G AG R QHR L GR H+G
Sbjct: 90 AGALRLRAVPGLGGAAGPRGHQHRHWLRSPGGRRHRG 126
>UniRef50_Q96SB4 Cluster: Serine/threonine-protein kinase SRPK1;
n=56; Euteleostomi|Rep: Serine/threonine-protein kinase
SRPK1 - Homo sapiens (Human)
Length = 826
Score = 33.1 bits (72), Expect = 6.7
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +1
Query: 433 RRPPSAASDVTTPCRWSTTPRPRR*ISNGSNRS 531
RRP + + TPC W+ PRP S+G+ RS
Sbjct: 41 RRPSTEVAPPHTPCLWAAGPRPSFRASSGAGRS 73
>UniRef50_UPI0000E23955 Cluster: PREDICTED: similar to heat shock
protein 2; n=1; Pan troglodytes|Rep: PREDICTED: similar
to heat shock protein 2 - Pan troglodytes
Length = 640
Score = 32.7 bits (71), Expect = 8.9
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Frame = +1
Query: 379 RTCQRATYTSRGWPRS-LCRRPPSAASD--VTTPCRWSTTPRPR 501
R+ RA+ +R WP + CRRP S+A++ + C +ST PR R
Sbjct: 360 RSXTRASTPTRRWPMAPRCRRPSSSATNQRMCRTCCYSTXPRCR 403
>UniRef50_UPI0000DA3FAC Cluster: PREDICTED: similar to Zinc finger
protein 40 (Transcription factor alphaA-CRYBP1) (Alpha
A-crystallin-binding protein I) (Alpha A-CRYBP1); n=1;
Rattus norvegicus|Rep: PREDICTED: similar to Zinc finger
protein 40 (Transcription factor alphaA-CRYBP1) (Alpha
A-crystallin-binding protein I) (Alpha A-CRYBP1) -
Rattus norvegicus
Length = 2763
Score = 32.7 bits (71), Expect = 8.9
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = +3
Query: 417 APESVQAAAQCSIGRDYPMPMVDHTKASQINIERIKQVYAQLARYKPQ 560
+PE V A +QCS YP+P+ K+ Q+ +R+ +++Q P+
Sbjct: 326 SPELV-AESQCSPCTSYPVPVASTQKSEQVAAQRVSHLHSQYDHLVPK 372
>UniRef50_Q8DLE3 Cluster: Tll0552 protein; n=1; Synechococcus
elongatus|Rep: Tll0552 protein - Synechococcus elongatus
(Thermosynechococcus elongatus)
Length = 276
Score = 32.7 bits (71), Expect = 8.9
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = +3
Query: 90 DAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSVNAGMWMW 266
DA L+ G++H+ +R +A ++ + W+ G F + LLD D + N W W
Sbjct: 166 DAFSSDLQRTGYLHNHARLWLAAYVVHW-CRVRWQAGAAWFLQHLLDGDPASNNLSWQW 223
>UniRef50_A2X003 Cluster: Putative uncharacterized protein; n=3; Oryza
sativa|Rep: Putative uncharacterized protein - Oryza
sativa subsp. indica (Rice)
Length = 2617
Score = 32.7 bits (71), Expect = 8.9
Identities = 27/85 (31%), Positives = 37/85 (43%), Gaps = 2/85 (2%)
Frame = +3
Query: 369 PALKNMPTRYIHEPW-MAPESVQAAAQCSIGRDYPMPMVDHT-KASQINIERIKQVYAQL 542
P+L P+ +P + P ++ A S PMPM T +AS QL
Sbjct: 2447 PSLVVQPSSQATQPESILPGNMYRAMSSSPFSSTPMPMPHGTYRASGAQPHAPSPHLQQL 2506
Query: 543 ARYKPQATLNANAVQRPNVLASRXP 617
P AT + N QRP++LAS P
Sbjct: 2507 RMPSPYATSHGNQHQRPSILASLLP 2531
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 703,033,386
Number of Sequences: 1657284
Number of extensions: 15150930
Number of successful extensions: 41004
Number of sequences better than 10.0: 209
Number of HSP's better than 10.0 without gapping: 39022
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40776
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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