Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1009
         (700 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...   286   5e-79
DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1 pro...   161   2e-41
AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic acetylch...    25   2.3  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    25   3.0  
AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi...    25   3.0  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    24   4.0  
AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.       24   5.3  
AJ010194-1|CAA09033.1|  684|Anopheles gambiae prophenoloxidase p...    23   7.0  

>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score =  286 bits (701), Expect = 5e-79
 Identities = 123/174 (70%), Positives = 140/174 (80%)
 Frame = +3

Query: 33  RRANQLQFRARGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVF 212
           R A  L   A G+  +PW DAIM QLREEGWIHHL+RHAVACFLTRGDLWISWEEGMKVF
Sbjct: 322 RNAEALAKWASGQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWISWEEGMKVF 381

Query: 213 DELLLDADWSVNAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPT 392
           +ELLLDADWSVNAGMWMW           HCYCPV+FGRK DPNGD+IR+Y+P LKN PT
Sbjct: 382 EELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDYIRRYLPVLKNFPT 441

Query: 393 RYIHEPWMAPESVQAAAQCSIGRDYPMPMVDHTKASQINIERIKQVYAQLARYK 554
           R+IHEPW A ESVQ AA+C IG+DYP+PMV+H  AS+ N+ERIKQVY  LA+Y+
Sbjct: 442 RFIHEPWNASESVQRAAKCLIGKDYPLPMVNHAIASRANMERIKQVYQHLAKYR 495


>DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1
           protein.
          Length = 545

 Score =  161 bits (391), Expect = 2e-41
 Identities = 71/161 (44%), Positives = 94/161 (58%), Gaps = 2/161 (1%)
 Frame = +3

Query: 66  GKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADWSV 245
           G+  +P  DA M QL  EGW+HH+ R+  A FLTRG LW+SWEEG++ F + LLDADWSV
Sbjct: 353 GRTGFPMIDAAMRQLLAEGWLHHILRNITATFLTRGGLWLSWEEGLQHFLKYLLDADWSV 412

Query: 246 NAGMWMW--XXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMA 419
            AG WMW              C CP+   R+ DP GD++++Y+P L N P +++HEPW A
Sbjct: 413 CAGNWMWVSSSAFERLLDSSKCTCPIALARRLDPKGDYVKRYLPELANYPAQFVHEPWKA 472

Query: 420 PESVQAAAQCSIGRDYPMPMVDHTKASQINIERIKQVYAQL 542
               Q    C IG  YP PMVD    S+ N   +  +  +L
Sbjct: 473 SREQQIEYGCVIGEKYPAPMVDLAIVSKRNAHTMASLREKL 513


>AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 7 protein.
          Length = 509

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -3

Query: 293 LLEKRRAGEPHPHACVHRPVCIEE 222
           +L   R GEP+PH C  RP   E+
Sbjct: 326 ILRMSRPGEPYPHPC--RPTVDEK 347


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/proton
            exchanger 3 protein.
          Length = 1221

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 11/52 (21%), Positives = 24/52 (46%)
 Frame = -1

Query: 286  KNDEQENHIHMPAFTDQSASRSNSSNTFIPSSHEIQRSPLVKKQATACRDKW 131
            K+ +Q+NH+  P F    +++  +++      HE       ++QA    + W
Sbjct: 855  KDGKQQNHVSFPEFVQNGSAKQFANDYINEVLHEDNEDE--ERQAAGPSEDW 904


>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
           protein I protein.
          Length = 1340

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 11/35 (31%), Positives = 14/35 (40%)
 Frame = +2

Query: 437 GRPVQHRT*LPHADGRPHQGLADKYRTDQTGLRTT 541
           G P +      H DG P +G+  K      G  TT
Sbjct: 342 GLPFKCALQFTHHDGTPAKGITGKVEVSDVGFETT 376


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 10/56 (17%)
 Frame = -3

Query: 299 EKLLEKRRAGEPHPHACVHRPVC--------IEE*LIEHLHSFF--P*NPKISSCQ 162
           ++L+   + G+P   +C +RP+C        +E  ++  LH F   P +P++S  Q
Sbjct: 472 QRLVLIPKPGKPSGVSCSYRPLCMLDALGKVLERLILNRLHEFLEDPESPRLSDRQ 527


>AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.
          Length = 525

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = +2

Query: 368 TGSEEHANALHTRAVDGPGVCAGGR 442
           T +    N   TR   G G CAGGR
Sbjct: 450 TSTTTEGNPGTTRPPSGDGPCAGGR 474


>AJ010194-1|CAA09033.1|  684|Anopheles gambiae prophenoloxidase
           protein.
          Length = 684

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +2

Query: 458 T*LPHADGRPHQGLADKYRTDQ 523
           T +P  DG+ +  L D Y TDQ
Sbjct: 19  TFVPKVDGKLYYDLPDAYLTDQ 40


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 732,708
Number of Sequences: 2352
Number of extensions: 15518
Number of successful extensions: 35
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)