Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1009
(700 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF015898-1|ABM64209.1| 586|Homo sapiens photolyase-like cryptoc... 271 1e-72
D84657-1|BAA12710.1| 586|Homo sapiens photolyase homolog protein. 271 1e-72
D83702-1|BAA12068.1| 586|Homo sapiens photolyase protein. 271 1e-72
BC030519-1|AAH30519.1| 586|Homo sapiens cryptochrome 1 (photoly... 271 1e-72
EF015899-1|ABM64210.1| 593|Homo sapiens photolyase-like cryptoc... 266 4e-71
BC041814-1|AAH41814.1| 593|Homo sapiens cryptochrome 2 (photoly... 266 4e-71
BC035161-1|AAH35161.1| 461|Homo sapiens CRY2 protein protein. 266 4e-71
AB014558-1|BAA31633.1| 589|Homo sapiens KIAA0658 protein protein. 266 4e-71
AK098615-1|BAC05354.1| 194|Homo sapiens protein ( Homo sapiens ... 134 3e-31
AJ318054-1|CAC39299.1| 826|Homo sapiens SRPK1a protein kinase p... 33 0.98
AB040936-1|BAA96027.2| 4464|Homo sapiens KIAA1503 protein protein. 31 3.0
AK092581-1|BAC03919.1| 167|Homo sapiens protein ( Homo sapiens ... 30 6.9
AK056130-1|BAB71099.1| 167|Homo sapiens protein ( Homo sapiens ... 30 6.9
Y08266-1|CAA69592.1| 191|Homo sapiens DAN15 protein. 30 9.1
>EF015898-1|ABM64209.1| 586|Homo sapiens photolyase-like
cryptochrome 1 protein.
Length = 586
Score = 271 bits (665), Expect = 1e-72
Identities = 113/179 (63%), Positives = 139/179 (77%)
Frame = +3
Query: 60 ARGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADW 239
A G+ +PW DAIM QLR+EGWIHHL+RHAVACFLTRGDLWISWEEGMKVF+ELLLDADW
Sbjct: 331 AEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADW 390
Query: 240 SVNAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMA 419
S+NAG WMW HCYCPV FGR+TDPNGD+IR+Y+P L+ P +YI++PW A
Sbjct: 391 SINAGSWMWLSCSSFFQQFFHCYCPVGFGRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNA 450
Query: 420 PESVQAAAQCSIGRDYPMPMVDHTKASQINIERIKQVYAQLARYKPQATLNANAVQRPN 596
PE +Q A+C IG +YP PMV+H +AS++NIER+KQ+Y QL+RY+ L A+ PN
Sbjct: 451 PEGIQKVAKCLIGVNYPKPMVNHAEASRLNIERMKQIYQQLSRYRGLGLL-ASVPSNPN 508
>D84657-1|BAA12710.1| 586|Homo sapiens photolyase homolog protein.
Length = 586
Score = 271 bits (665), Expect = 1e-72
Identities = 113/179 (63%), Positives = 139/179 (77%)
Frame = +3
Query: 60 ARGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADW 239
A G+ +PW DAIM QLR+EGWIHHL+RHAVACFLTRGDLWISWEEGMKVF+ELLLDADW
Sbjct: 331 AEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADW 390
Query: 240 SVNAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMA 419
S+NAG WMW HCYCPV FGR+TDPNGD+IR+Y+P L+ P +YI++PW A
Sbjct: 391 SINAGSWMWLSCSSFFQQFFHCYCPVGFGRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNA 450
Query: 420 PESVQAAAQCSIGRDYPMPMVDHTKASQINIERIKQVYAQLARYKPQATLNANAVQRPN 596
PE +Q A+C IG +YP PMV+H +AS++NIER+KQ+Y QL+RY+ L A+ PN
Sbjct: 451 PEGIQKVAKCLIGVNYPKPMVNHAEASRLNIERMKQIYQQLSRYRGLGLL-ASVPSNPN 508
>D83702-1|BAA12068.1| 586|Homo sapiens photolyase protein.
Length = 586
Score = 271 bits (665), Expect = 1e-72
Identities = 113/179 (63%), Positives = 139/179 (77%)
Frame = +3
Query: 60 ARGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADW 239
A G+ +PW DAIM QLR+EGWIHHL+RHAVACFLTRGDLWISWEEGMKVF+ELLLDADW
Sbjct: 331 AEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADW 390
Query: 240 SVNAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMA 419
S+NAG WMW HCYCPV FGR+TDPNGD+IR+Y+P L+ P +YI++PW A
Sbjct: 391 SINAGSWMWLSCSSFFQQFFHCYCPVGFGRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNA 450
Query: 420 PESVQAAAQCSIGRDYPMPMVDHTKASQINIERIKQVYAQLARYKPQATLNANAVQRPN 596
PE +Q A+C IG +YP PMV+H +AS++NIER+KQ+Y QL+RY+ L A+ PN
Sbjct: 451 PEGIQKVAKCLIGVNYPKPMVNHAEASRLNIERMKQIYQQLSRYRGLGLL-ASVPSNPN 508
>BC030519-1|AAH30519.1| 586|Homo sapiens cryptochrome 1
(photolyase-like) protein.
Length = 586
Score = 271 bits (665), Expect = 1e-72
Identities = 113/179 (63%), Positives = 139/179 (77%)
Frame = +3
Query: 60 ARGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADW 239
A G+ +PW DAIM QLR+EGWIHHL+RHAVACFLTRGDLWISWEEGMKVF+ELLLDADW
Sbjct: 331 AEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADW 390
Query: 240 SVNAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMA 419
S+NAG WMW HCYCPV FGR+TDPNGD+IR+Y+P L+ P +YI++PW A
Sbjct: 391 SINAGSWMWLSCSSFFQQFFHCYCPVGFGRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNA 450
Query: 420 PESVQAAAQCSIGRDYPMPMVDHTKASQINIERIKQVYAQLARYKPQATLNANAVQRPN 596
PE +Q A+C IG +YP PMV+H +AS++NIER+KQ+Y QL+RY+ L A+ PN
Sbjct: 451 PEGIQKVAKCLIGVNYPKPMVNHAEASRLNIERMKQIYQQLSRYRGLGLL-ASVPSNPN 508
>EF015899-1|ABM64210.1| 593|Homo sapiens photolyase-like
cryptochrome 2 protein.
Length = 593
Score = 266 bits (653), Expect = 4e-71
Identities = 110/165 (66%), Positives = 135/165 (81%)
Frame = +3
Query: 60 ARGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADW 239
A GK +PW DAIM QLR+EGWIHHL+RHAVACFLTRGDLW+SWE G++VFDELLLDAD+
Sbjct: 350 AEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWESGVRVFDELLLDADF 409
Query: 240 SVNAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMA 419
SVNAG WMW HCYCPV FGR+TDP+GD+IR+Y+P LK P+RYI+EPW A
Sbjct: 410 SVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYIRRYLPKLKAFPSRYIYEPWNA 469
Query: 420 PESVQAAAQCSIGRDYPMPMVDHTKASQINIERIKQVYAQLARYK 554
PES+Q AA+C IG DYP P+V+H + S++NIER+KQ+Y QL+RY+
Sbjct: 470 PESIQKAAKCIIGVDYPRPIVNHAETSRLNIERMKQIYQQLSRYR 514
>BC041814-1|AAH41814.1| 593|Homo sapiens cryptochrome 2
(photolyase-like) protein.
Length = 593
Score = 266 bits (653), Expect = 4e-71
Identities = 110/165 (66%), Positives = 135/165 (81%)
Frame = +3
Query: 60 ARGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADW 239
A GK +PW DAIM QLR+EGWIHHL+RHAVACFLTRGDLW+SWE G++VFDELLLDAD+
Sbjct: 350 AEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWESGVRVFDELLLDADF 409
Query: 240 SVNAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMA 419
SVNAG WMW HCYCPV FGR+TDP+GD+IR+Y+P LK P+RYI+EPW A
Sbjct: 410 SVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYIRRYLPKLKAFPSRYIYEPWNA 469
Query: 420 PESVQAAAQCSIGRDYPMPMVDHTKASQINIERIKQVYAQLARYK 554
PES+Q AA+C IG DYP P+V+H + S++NIER+KQ+Y QL+RY+
Sbjct: 470 PESIQKAAKCIIGVDYPRPIVNHAETSRLNIERMKQIYQQLSRYR 514
>BC035161-1|AAH35161.1| 461|Homo sapiens CRY2 protein protein.
Length = 461
Score = 266 bits (653), Expect = 4e-71
Identities = 110/165 (66%), Positives = 135/165 (81%)
Frame = +3
Query: 60 ARGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADW 239
A GK +PW DAIM QLR+EGWIHHL+RHAVACFLTRGDLW+SWE G++VFDELLLDAD+
Sbjct: 218 AEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWESGVRVFDELLLDADF 277
Query: 240 SVNAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMA 419
SVNAG WMW HCYCPV FGR+TDP+GD+IR+Y+P LK P+RYI+EPW A
Sbjct: 278 SVNAGSWMWLSCGAFFQQFFHCYCPVGFGRRTDPSGDYIRRYLPKLKAFPSRYIYEPWNA 337
Query: 420 PESVQAAAQCSIGRDYPMPMVDHTKASQINIERIKQVYAQLARYK 554
PES+Q AA+C IG DYP P+V+H + S++NIER+KQ+Y QL+RY+
Sbjct: 338 PESIQKAAKCIIGVDYPRPIVNHAETSRLNIERMKQIYQQLSRYR 382
>AB014558-1|BAA31633.1| 589|Homo sapiens KIAA0658 protein protein.
Length = 589
Score = 266 bits (653), Expect = 4e-71
Identities = 110/165 (66%), Positives = 135/165 (81%)
Frame = +3
Query: 60 ARGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLLDADW 239
A GK +PW DAIM QLR+EGWIHHL+RHAVACFLTRGDLW+SWE G++VFDELLLDAD+
Sbjct: 346 AEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWESGVRVFDELLLDADF 405
Query: 240 SVNAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMA 419
SVNAG WMW HCYCPV FGR+TDP+GD+IR+Y+P LK P+RYI+EPW A
Sbjct: 406 SVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYIRRYLPKLKAFPSRYIYEPWNA 465
Query: 420 PESVQAAAQCSIGRDYPMPMVDHTKASQINIERIKQVYAQLARYK 554
PES+Q AA+C IG DYP P+V+H + S++NIER+KQ+Y QL+RY+
Sbjct: 466 PESIQKAAKCIIGVDYPRPIVNHAETSRLNIERMKQIYQQLSRYR 510
>AK098615-1|BAC05354.1| 194|Homo sapiens protein ( Homo sapiens
cDNA FLJ25749 fis, clone TST06111, highly similar to
Homo sapiens mRNA for photolyase. ).
Length = 194
Score = 134 bits (324), Expect = 3e-31
Identities = 55/99 (55%), Positives = 75/99 (75%)
Frame = +3
Query: 300 HCYCPVRFGRKTDPNGDFIRKYIPALKNMPTRYIHEPWMAPESVQAAAQCSIGRDYPMPM 479
HCYCPV FGR+TDPNGD+IR+Y+P L+ P +YI++ W APE +Q A+C IG +YP PM
Sbjct: 19 HCYCPVGFGRRTDPNGDYIRRYLPVLRGFPAKYIYDLWNAPEGIQKVAKCLIGVNYPKPM 78
Query: 480 VDHTKASQINIERIKQVYAQLARYKPQATLNANAVQRPN 596
V+H +AS++NIER+KQ+Y QL+RY+ L A+ PN
Sbjct: 79 VNHAEASRLNIERMKQIYQQLSRYRGLGLL-ASVPSNPN 116
>AJ318054-1|CAC39299.1| 826|Homo sapiens SRPK1a protein kinase
protein.
Length = 826
Score = 33.1 bits (72), Expect = 0.98
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +1
Query: 433 RRPPSAASDVTTPCRWSTTPRPRR*ISNGSNRS 531
RRP + + TPC W+ PRP S+G+ RS
Sbjct: 41 RRPSTEVAPPHTPCLWAAGPRPSFRASSGAGRS 73
>AB040936-1|BAA96027.2| 4464|Homo sapiens KIAA1503 protein protein.
Length = 4464
Score = 31.5 bits (68), Expect = 3.0
Identities = 20/57 (35%), Positives = 27/57 (47%)
Frame = +3
Query: 336 DPNGDFIRKYIPALKNMPTRYIHEPWMAPESVQAAAQCSIGRDYPMPMVDHTKASQI 506
DP ++IR+Y PAL N T W ++ A +C IG D H K +QI
Sbjct: 2934 DPFRNWIRQY-PALVNCTTINWFSEWPQEALLEVAEKCLIGVDLGTQENIHRKVAQI 2989
>AK092581-1|BAC03919.1| 167|Homo sapiens protein ( Homo sapiens
cDNA FLJ35262 fis, clone PROST2004570. ).
Length = 167
Score = 30.3 bits (65), Expect = 6.9
Identities = 13/41 (31%), Positives = 17/41 (41%)
Frame = -2
Query: 504 SARPWCGRPSAWGSHVRCCTGRPPAQTPGPSTARVCSALAC 382
+ P C H C T P PGP + R+CS +C
Sbjct: 37 TTHPTCTLGQRATHHGPCPTASVPCWAPGPRSPRLCSTTSC 77
>AK056130-1|BAB71099.1| 167|Homo sapiens protein ( Homo sapiens
cDNA FLJ31568 fis, clone NT2RI2001595. ).
Length = 167
Score = 30.3 bits (65), Expect = 6.9
Identities = 13/41 (31%), Positives = 17/41 (41%)
Frame = -2
Query: 504 SARPWCGRPSAWGSHVRCCTGRPPAQTPGPSTARVCSALAC 382
+ P C H C T P PGP + R+CS +C
Sbjct: 37 TTHPTCTLGQRATHHGPCPTASVPCWAPGPRSPRLCSTTSC 77
>Y08266-1|CAA69592.1| 191|Homo sapiens DAN15 protein.
Length = 191
Score = 29.9 bits (64), Expect = 9.1
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = -2
Query: 504 SARPWCGRPSAWGSHVRCCTGRPPAQTPGPSTA 406
SARP G + W +CC GR P + PGP+ A
Sbjct: 141 SARPRHGAAATWRRQGQCC-GR-PGRPPGPAAA 171
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,836,627
Number of Sequences: 237096
Number of extensions: 2364309
Number of successful extensions: 5378
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 4979
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5377
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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