Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1009
(700 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D83701-1|BAA12067.1| 540|Drosophila melanogaster photolyase pro... 198 4e-51
AY089584-1|AAL90322.1| 540|Drosophila melanogaster RE11660p pro... 198 6e-51
AE014134-3257|AAF53904.1| 540|Drosophila melanogaster CG2488-PB... 198 6e-51
AE014134-3256|AAN11080.1| 540|Drosophila melanogaster CG2488-PA... 198 6e-51
AY051514-1|AAK92938.1| 542|Drosophila melanogaster GH16672p pro... 145 6e-35
AF099734-1|AAC83828.1| 542|Drosophila melanogaster cryptochrome... 145 6e-35
AE014297-2641|AAF55649.1| 542|Drosophila melanogaster CG3772-PA... 145 6e-35
AB018400-1|BAA33787.1| 542|Drosophila melanogaster blue-light r... 145 6e-35
AB019389-1|BAA35000.1| 542|Drosophila melanogaster blue light p... 143 2e-34
>D83701-1|BAA12067.1| 540|Drosophila melanogaster photolyase
protein.
Length = 540
Score = 198 bits (484), Expect = 4e-51
Identities = 88/168 (52%), Positives = 108/168 (64%)
Frame = +3
Query: 30 QRRANQLQFRARGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKV 209
Q + L+ G+ YP+ DAIM QLR+EGWIHHL+RHAVACFLTRGDLWISWEEG +V
Sbjct: 331 QEHPDHLEAWTHGRTGYPFIDAIMRQLRQEGWIHHLARHAVACFLTRGDLWISWEEGQRV 390
Query: 210 FDELLLDADWSVNAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMP 389
F++LLLD DW++NAG WMW Y PV FG+KTDP G +IRKY+P L P
Sbjct: 391 FEQLLLDQDWALNAGNWMWLSASAFFHQYFRVYSPVAFGKKTDPQGHYIRKYVPELSKYP 450
Query: 390 TRYIHEPWMAPESVQAAAQCSIGRDYPMPMVDHTKASQINIERIKQVY 533
I+EPW A Q A C +G DYP +V H + NI+R+ Y
Sbjct: 451 ATCIYEPWKASLVDQRAYGCVLGTDYPHRIVKHEVVHKENIKRMGAAY 498
>AY089584-1|AAL90322.1| 540|Drosophila melanogaster RE11660p
protein.
Length = 540
Score = 198 bits (483), Expect = 6e-51
Identities = 88/168 (52%), Positives = 108/168 (64%)
Frame = +3
Query: 30 QRRANQLQFRARGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKV 209
Q + L+ G+ YP+ DAIM QLR+EGWIHHL+RHAVACFLTRGDLWISWEEG +V
Sbjct: 331 QEHPDHLEAWTHGRTGYPFIDAIMRQLRQEGWIHHLARHAVACFLTRGDLWISWEEGQRV 390
Query: 210 FDELLLDADWSVNAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMP 389
F++LLLD DW++NAG WMW Y PV FG+KTDP G +IRKY+P L P
Sbjct: 391 FEQLLLDQDWALNAGNWMWLSASAFFHQYFRVYSPVAFGKKTDPQGHYIRKYVPELSKYP 450
Query: 390 TRYIHEPWMAPESVQAAAQCSIGRDYPMPMVDHTKASQINIERIKQVY 533
I+EPW A Q A C +G DYP +V H + NI+R+ Y
Sbjct: 451 AGCIYEPWKASLVDQRAYGCVLGTDYPHRIVKHEVVHKENIKRMGAAY 498
>AE014134-3257|AAF53904.1| 540|Drosophila melanogaster CG2488-PB,
isoform B protein.
Length = 540
Score = 198 bits (483), Expect = 6e-51
Identities = 88/168 (52%), Positives = 108/168 (64%)
Frame = +3
Query: 30 QRRANQLQFRARGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKV 209
Q + L+ G+ YP+ DAIM QLR+EGWIHHL+RHAVACFLTRGDLWISWEEG +V
Sbjct: 331 QEHPDHLEAWTHGRTGYPFIDAIMRQLRQEGWIHHLARHAVACFLTRGDLWISWEEGQRV 390
Query: 210 FDELLLDADWSVNAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMP 389
F++LLLD DW++NAG WMW Y PV FG+KTDP G +IRKY+P L P
Sbjct: 391 FEQLLLDQDWALNAGNWMWLSASAFFHQYFRVYSPVAFGKKTDPQGHYIRKYVPELSKYP 450
Query: 390 TRYIHEPWMAPESVQAAAQCSIGRDYPMPMVDHTKASQINIERIKQVY 533
I+EPW A Q A C +G DYP +V H + NI+R+ Y
Sbjct: 451 AGCIYEPWKASLVDQRAYGCVLGTDYPHRIVKHEVVHKENIKRMGAAY 498
>AE014134-3256|AAN11080.1| 540|Drosophila melanogaster CG2488-PA,
isoform A protein.
Length = 540
Score = 198 bits (483), Expect = 6e-51
Identities = 88/168 (52%), Positives = 108/168 (64%)
Frame = +3
Query: 30 QRRANQLQFRARGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKV 209
Q + L+ G+ YP+ DAIM QLR+EGWIHHL+RHAVACFLTRGDLWISWEEG +V
Sbjct: 331 QEHPDHLEAWTHGRTGYPFIDAIMRQLRQEGWIHHLARHAVACFLTRGDLWISWEEGQRV 390
Query: 210 FDELLLDADWSVNAGMWMWXXXXXXXXXXXHCYCPVRFGRKTDPNGDFIRKYIPALKNMP 389
F++LLLD DW++NAG WMW Y PV FG+KTDP G +IRKY+P L P
Sbjct: 391 FEQLLLDQDWALNAGNWMWLSASAFFHQYFRVYSPVAFGKKTDPQGHYIRKYVPELSKYP 450
Query: 390 TRYIHEPWMAPESVQAAAQCSIGRDYPMPMVDHTKASQINIERIKQVY 533
I+EPW A Q A C +G DYP +V H + NI+R+ Y
Sbjct: 451 AGCIYEPWKASLVDQRAYGCVLGTDYPHRIVKHEVVHKENIKRMGAAY 498
>AY051514-1|AAK92938.1| 542|Drosophila melanogaster GH16672p
protein.
Length = 542
Score = 145 bits (351), Expect = 6e-35
Identities = 70/174 (40%), Positives = 95/174 (54%), Gaps = 2/174 (1%)
Frame = +3
Query: 42 NQLQFRARGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDEL 221
N LQ G+ +P D M QL EGW+HH R+ VA FLTRG LW SWE G++ F +
Sbjct: 348 NLLQSWRLGQTGFPLIDGAMRQLLAEGWLHHTLRNTVATFLTRGGLWQSWEHGLQHFLKY 407
Query: 222 LLDADWSVNAGMWMWXXXXXXXXXXXHCY--CPVRFGRKTDPNGDFIRKYIPALKNMPTR 395
LLDADWSV AG WMW CPV ++ DP+G +I++Y+P L N+P
Sbjct: 408 LLDADWSVCAGNWMWVSSSAFERLLDSSLVTCPVALAKRLDPDGTYIKQYVPELMNVPKE 467
Query: 396 YIHEPWMAPESVQAAAQCSIGRDYPMPMVDHTKASQINIERIKQVYAQLARYKP 557
++HEPW Q +C IG YP ++D + A + N+ +K + L P
Sbjct: 468 FVHEPWRMSAEQQEQYECLIGVHYPERIIDLSMAVKRNMLAMKSLRNSLITPPP 521
>AF099734-1|AAC83828.1| 542|Drosophila melanogaster cryptochrome
protein.
Length = 542
Score = 145 bits (351), Expect = 6e-35
Identities = 70/174 (40%), Positives = 95/174 (54%), Gaps = 2/174 (1%)
Frame = +3
Query: 42 NQLQFRARGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDEL 221
N LQ G+ +P D M QL EGW+HH R+ VA FLTRG LW SWE G++ F +
Sbjct: 348 NLLQSWRLGQTGFPLIDGAMRQLLAEGWLHHTLRNTVATFLTRGGLWQSWEHGLQHFLKY 407
Query: 222 LLDADWSVNAGMWMWXXXXXXXXXXXHCY--CPVRFGRKTDPNGDFIRKYIPALKNMPTR 395
LLDADWSV AG WMW CPV ++ DP+G +I++Y+P L N+P
Sbjct: 408 LLDADWSVCAGNWMWVSSSAFERLLDSSLVTCPVALAKRLDPDGTYIKQYVPELMNVPKE 467
Query: 396 YIHEPWMAPESVQAAAQCSIGRDYPMPMVDHTKASQINIERIKQVYAQLARYKP 557
++HEPW Q +C IG YP ++D + A + N+ +K + L P
Sbjct: 468 FVHEPWRMSAEQQEQYECLIGVHYPERIIDLSMAVKRNMLAMKSLRNSLITPPP 521
>AE014297-2641|AAF55649.1| 542|Drosophila melanogaster CG3772-PA
protein.
Length = 542
Score = 145 bits (351), Expect = 6e-35
Identities = 70/174 (40%), Positives = 95/174 (54%), Gaps = 2/174 (1%)
Frame = +3
Query: 42 NQLQFRARGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDEL 221
N LQ G+ +P D M QL EGW+HH R+ VA FLTRG LW SWE G++ F +
Sbjct: 348 NLLQSWRLGQTGFPLIDGAMRQLLAEGWLHHTLRNTVATFLTRGGLWQSWEHGLQHFLKY 407
Query: 222 LLDADWSVNAGMWMWXXXXXXXXXXXHCY--CPVRFGRKTDPNGDFIRKYIPALKNMPTR 395
LLDADWSV AG WMW CPV ++ DP+G +I++Y+P L N+P
Sbjct: 408 LLDADWSVCAGNWMWVSSSAFERLLDSSLVTCPVALAKRLDPDGTYIKQYVPELMNVPKE 467
Query: 396 YIHEPWMAPESVQAAAQCSIGRDYPMPMVDHTKASQINIERIKQVYAQLARYKP 557
++HEPW Q +C IG YP ++D + A + N+ +K + L P
Sbjct: 468 FVHEPWRMSAEQQEQYECLIGVHYPERIIDLSMAVKRNMLAMKSLRNSLITPPP 521
>AB018400-1|BAA33787.1| 542|Drosophila melanogaster blue-light
receptor protein.
Length = 542
Score = 145 bits (351), Expect = 6e-35
Identities = 70/174 (40%), Positives = 95/174 (54%), Gaps = 2/174 (1%)
Frame = +3
Query: 42 NQLQFRARGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDEL 221
N LQ G+ +P D M QL EGW+HH R+ VA FLTRG LW SWE G++ F +
Sbjct: 348 NLLQSWRLGQTGFPLIDGAMRQLLAEGWLHHTLRNTVATFLTRGGLWQSWEHGLQHFLKY 407
Query: 222 LLDADWSVNAGMWMWXXXXXXXXXXXHCY--CPVRFGRKTDPNGDFIRKYIPALKNMPTR 395
LLDADWSV AG WMW CPV ++ DP+G +I++Y+P L N+P
Sbjct: 408 LLDADWSVCAGNWMWVSSSAFERLLDSSLVTCPVALAKRLDPDGTYIKQYVPELMNVPKE 467
Query: 396 YIHEPWMAPESVQAAAQCSIGRDYPMPMVDHTKASQINIERIKQVYAQLARYKP 557
++HEPW Q +C IG YP ++D + A + N+ +K + L P
Sbjct: 468 FVHEPWRMSAEQQEQYECLIGVHYPERIIDLSMAVKRNMLAMKSLRNSLITPPP 521
>AB019389-1|BAA35000.1| 542|Drosophila melanogaster blue light
photoreceptor protein.
Length = 542
Score = 143 bits (347), Expect = 2e-34
Identities = 69/172 (40%), Positives = 94/172 (54%), Gaps = 2/172 (1%)
Frame = +3
Query: 48 LQFRARGKPXYPWXDAIMIQLREEGWIHHLSRHAVACFLTRGDLWISWEEGMKVFDELLL 227
LQ G+ +P D M QL EGW+HH R+ VA FLTRG LW SWE G++ F + LL
Sbjct: 350 LQSWRLGQTGFPLIDGAMRQLLAEGWLHHTLRNTVATFLTRGGLWQSWEHGLQHFLKYLL 409
Query: 228 DADWSVNAGMWMWXXXXXXXXXXXHCY--CPVRFGRKTDPNGDFIRKYIPALKNMPTRYI 401
DADWSV AG WMW CPV ++ DP+G +I++Y+P L N+P ++
Sbjct: 410 DADWSVCAGNWMWVSSSAFERLLDSSLVTCPVALAKRLDPDGTYIKQYVPELMNVPKEFV 469
Query: 402 HEPWMAPESVQAAAQCSIGRDYPMPMVDHTKASQINIERIKQVYAQLARYKP 557
HEPW Q +C IG YP ++D + A + N+ +K + L P
Sbjct: 470 HEPWRMSAEQQEQYECLIGVHYPERIIDLSMAVKRNMLAMKSLRNSLITPPP 521
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,635,689
Number of Sequences: 53049
Number of extensions: 713422
Number of successful extensions: 1960
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1840
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1955
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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