Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1008
(500 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 26 0.17
AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory recept... 26 0.22
AM292370-1|CAL23182.1| 418|Tribolium castaneum gustatory recept... 23 2.0
AM292335-1|CAL23147.2| 374|Tribolium castaneum gustatory recept... 23 2.0
AM292364-1|CAL23176.2| 353|Tribolium castaneum gustatory recept... 22 3.6
AY584475-1|AAS93634.1| 209|Tribolium castaneum homothorax protein. 21 4.7
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 21 4.7
AM292324-1|CAL23136.1| 398|Tribolium castaneum gustatory recept... 21 4.7
AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein. 21 4.7
>AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory receptor
candidate 19 protein.
Length = 355
Score = 26.2 bits (55), Expect = 0.17
Identities = 10/42 (23%), Positives = 23/42 (54%)
Frame = -1
Query: 272 TTHLFVYYVTHRLYLIKIIVTLHHLYAGKILMF*VFFFIYLF 147
T HL ++Y ++ + ++ ++ Y I++ V++F Y F
Sbjct: 80 TVHL-LFYCPFIIFTVHFLLCTYYFYYAFIILLCVYYFYYAF 120
Score = 25.8 bits (54), Expect = 0.22
Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = -1
Query: 272 TTHLFVYYVTHRLYLIKIIVTLHHL-YAGKILMF*VFFFIYLF 147
T HL + Y II T+H L Y I++ +++F Y F
Sbjct: 203 TLHLLFLPCIYYFYSAFIIFTIHLLFYCVLIILLCIYYFYYAF 245
Score = 21.0 bits (42), Expect = 6.2
Identities = 9/33 (27%), Positives = 14/33 (42%)
Frame = -1
Query: 272 TTHLFVYYVTHRLYLIKIIVTLHHLYAGKILMF 174
T HL + + II T+H L+ + F
Sbjct: 157 TVHLLFLLCIYHFFCAFIIFTMHLLFCCAFIFF 189
Score = 21.0 bits (42), Expect = 6.2
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +3
Query: 12 LQFYECLYFYYSLISI 59
L F C+Y++YS I
Sbjct: 206 LLFLPCIYYFYSAFII 221
Score = 21.0 bits (42), Expect = 6.2
Identities = 10/38 (26%), Positives = 17/38 (44%)
Frame = +1
Query: 277 CAFLSLIAHKLLLIGL*FYYDV*L*YFISTILCNANVI 390
CAF+ H L L+ + ++Y + C A +I
Sbjct: 270 CAFIIFTMHLLFLLCIYYFYCALIILLCIYYFCRAFII 307
>AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory receptor
candidate 61 protein.
Length = 670
Score = 25.8 bits (54), Expect = 0.22
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -3
Query: 258 CLLCYPQIISN*DYCYFAPSLRWQNINVLGVFFY 157
CL+ + I+ YCY++ S+R I+ LG FF+
Sbjct: 542 CLIQFNTIVFAFCYCYYSISIR--PISTLGWFFW 573
>AM292370-1|CAL23182.1| 418|Tribolium castaneum gustatory receptor
candidate 49 protein.
Length = 418
Score = 22.6 bits (46), Expect = 2.0
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +3
Query: 6 TFLQFYECLYFYYSLISI*FLKR 74
TF FY C FY+ L+ + R
Sbjct: 318 TFNLFYLCFCFYWLLVMVAMFSR 340
>AM292335-1|CAL23147.2| 374|Tribolium castaneum gustatory receptor
candidate 14 protein.
Length = 374
Score = 22.6 bits (46), Expect = 2.0
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +3
Query: 6 TFLQFYECLYFYYSLISI*FLKR 74
TF FY C FY+ L+ + R
Sbjct: 274 TFNLFYLCFCFYWLLVMVAMFSR 296
>AM292364-1|CAL23176.2| 353|Tribolium castaneum gustatory receptor
candidate 43 protein.
Length = 353
Score = 21.8 bits (44), Expect = 3.6
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -3
Query: 144 YTFVTYQNILITFYKLMFKNITDL 73
+T +QN + FY+L+ ITD+
Sbjct: 150 HTVEYFQNYIHFFYQLLLYLITDM 173
>AY584475-1|AAS93634.1| 209|Tribolium castaneum homothorax protein.
Length = 209
Score = 21.4 bits (43), Expect = 4.7
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +1
Query: 73 EICNIFEHQFIECNK 117
E+C+ F H++I C K
Sbjct: 10 ELCDNFCHRYISCLK 24
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 21.4 bits (43), Expect = 4.7
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = -1
Query: 263 LFVYYVTHRLYLIKIIVTLHHLYAGKILMF*VFFFIYLFNT 141
LFV +V++ LYL+ + +Y L+ F YL T
Sbjct: 52 LFVSFVSYWLYLVLEADDMLPIYKNTYLIILFADFAYLETT 92
>AM292324-1|CAL23136.1| 398|Tribolium castaneum gustatory receptor
candidate 3 protein.
Length = 398
Score = 21.4 bits (43), Expect = 4.7
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = -1
Query: 263 LFVYYVTHRLYLIKIIVTLHHLYAGKILMF*VFFFIYLFNT 141
LFV +V++ LYL+ + +Y L+ F YL T
Sbjct: 70 LFVSFVSYWLYLVLEADDMLPIYKNTYLIILFADFAYLETT 110
>AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein.
Length = 456
Score = 21.4 bits (43), Expect = 4.7
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +1
Query: 73 EICNIFEHQFIECNK 117
E+C+ F H++I C K
Sbjct: 166 ELCDNFCHRYISCLK 180
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,098
Number of Sequences: 336
Number of extensions: 2182
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11839801
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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