SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1008
         (500 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    26   0.17 
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    26   0.22 
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   2.0  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    23   2.0  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    22   3.6  
AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    21   4.7  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   4.7  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   4.7  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   4.7  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 26.2 bits (55), Expect = 0.17
 Identities = 10/42 (23%), Positives = 23/42 (54%)
 Frame = -1

Query: 272 TTHLFVYYVTHRLYLIKIIVTLHHLYAGKILMF*VFFFIYLF 147
           T HL ++Y    ++ +  ++  ++ Y   I++  V++F Y F
Sbjct: 80  TVHL-LFYCPFIIFTVHFLLCTYYFYYAFIILLCVYYFYYAF 120



 Score = 25.8 bits (54), Expect = 0.22
 Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = -1

Query: 272 TTHLFVYYVTHRLYLIKIIVTLHHL-YAGKILMF*VFFFIYLF 147
           T HL      +  Y   II T+H L Y   I++  +++F Y F
Sbjct: 203 TLHLLFLPCIYYFYSAFIIFTIHLLFYCVLIILLCIYYFYYAF 245



 Score = 21.0 bits (42), Expect = 6.2
 Identities = 9/33 (27%), Positives = 14/33 (42%)
 Frame = -1

Query: 272 TTHLFVYYVTHRLYLIKIIVTLHHLYAGKILMF 174
           T HL      +  +   II T+H L+    + F
Sbjct: 157 TVHLLFLLCIYHFFCAFIIFTMHLLFCCAFIFF 189



 Score = 21.0 bits (42), Expect = 6.2
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 12  LQFYECLYFYYSLISI 59
           L F  C+Y++YS   I
Sbjct: 206 LLFLPCIYYFYSAFII 221



 Score = 21.0 bits (42), Expect = 6.2
 Identities = 10/38 (26%), Positives = 17/38 (44%)
 Frame = +1

Query: 277 CAFLSLIAHKLLLIGL*FYYDV*L*YFISTILCNANVI 390
           CAF+    H L L+ + ++Y   +        C A +I
Sbjct: 270 CAFIIFTMHLLFLLCIYYFYCALIILLCIYYFCRAFII 307


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 25.8 bits (54), Expect = 0.22
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = -3

Query: 258 CLLCYPQIISN*DYCYFAPSLRWQNINVLGVFFY 157
           CL+ +  I+    YCY++ S+R   I+ LG FF+
Sbjct: 542 CLIQFNTIVFAFCYCYYSISIR--PISTLGWFFW 573


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +3

Query: 6   TFLQFYECLYFYYSLISI*FLKR 74
           TF  FY C  FY+ L+ +    R
Sbjct: 318 TFNLFYLCFCFYWLLVMVAMFSR 340


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +3

Query: 6   TFLQFYECLYFYYSLISI*FLKR 74
           TF  FY C  FY+ L+ +    R
Sbjct: 274 TFNLFYLCFCFYWLLVMVAMFSR 296


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -3

Query: 144 YTFVTYQNILITFYKLMFKNITDL 73
           +T   +QN +  FY+L+   ITD+
Sbjct: 150 HTVEYFQNYIHFFYQLLLYLITDM 173


>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 73  EICNIFEHQFIECNK 117
           E+C+ F H++I C K
Sbjct: 10  ELCDNFCHRYISCLK 24


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = -1

Query: 263 LFVYYVTHRLYLIKIIVTLHHLYAGKILMF*VFFFIYLFNT 141
           LFV +V++ LYL+     +  +Y    L+     F YL  T
Sbjct: 52  LFVSFVSYWLYLVLEADDMLPIYKNTYLIILFADFAYLETT 92


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = -1

Query: 263 LFVYYVTHRLYLIKIIVTLHHLYAGKILMF*VFFFIYLFNT 141
           LFV +V++ LYL+     +  +Y    L+     F YL  T
Sbjct: 70  LFVSFVSYWLYLVLEADDMLPIYKNTYLIILFADFAYLETT 110


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 73  EICNIFEHQFIECNK 117
           E+C+ F H++I C K
Sbjct: 166 ELCDNFCHRYISCLK 180


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,098
Number of Sequences: 336
Number of extensions: 2182
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11839801
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)

- SilkBase 1999-2023 -