Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1005
(800 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
U15955-1|AAA67443.1| 95|Apis mellifera defensin precursor prot... 24 1.4
AY496432-1|AAS75803.1| 95|Apis mellifera defensin/royalisin pr... 24 1.4
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 24 1.4
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 24 1.4
AJ308527-1|CAC33429.1| 57|Apis mellifera defensin protein. 24 1.4
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 23 2.5
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 23 4.4
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 23 4.4
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 23 4.4
DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor pro... 22 5.8
DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor pro... 22 5.8
AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled rec... 22 5.8
>U15955-1|AAA67443.1| 95|Apis mellifera defensin precursor
protein.
Length = 95
Score = 24.2 bits (50), Expect = 1.4
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 450 EHFQNCQHL*VRRRETFDLIHFK 518
EHF+N + RR T DL+ FK
Sbjct: 30 EHFENEERADRHRRVTCDLLSFK 52
>AY496432-1|AAS75803.1| 95|Apis mellifera defensin/royalisin
precursor protein.
Length = 95
Score = 24.2 bits (50), Expect = 1.4
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 450 EHFQNCQHL*VRRRETFDLIHFK 518
EHF+N + RR T DL+ FK
Sbjct: 30 EHFENEERADRHRRVTCDLLSFK 52
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 24.2 bits (50), Expect = 1.4
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -3
Query: 288 GVFIRNLLHSFPPRYANFQYP 226
GVF N++ P +Y ++YP
Sbjct: 505 GVFTFNIIKFVPVKYLTYEYP 525
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 24.2 bits (50), Expect = 1.4
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -3
Query: 288 GVFIRNLLHSFPPRYANFQYP 226
GVF N++ P +Y ++YP
Sbjct: 558 GVFTFNIIKFVPVKYLTYEYP 578
>AJ308527-1|CAC33429.1| 57|Apis mellifera defensin protein.
Length = 57
Score = 24.2 bits (50), Expect = 1.4
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 450 EHFQNCQHL*VRRRETFDLIHFK 518
EHF+N + RR T DL+ FK
Sbjct: 5 EHFENEERADRHRRVTCDLLSFK 27
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic
acetylcholine receptor alpha9subunit protein.
Length = 431
Score = 23.4 bits (48), Expect = 2.5
Identities = 9/18 (50%), Positives = 11/18 (61%), Gaps = 1/18 (5%)
Frame = -2
Query: 55 DTRFGILQL-KCKNFEHP 5
D FG L CKN++HP
Sbjct: 24 DNEFGFSYLLNCKNYDHP 41
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 22.6 bits (46), Expect = 4.4
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = +3
Query: 627 HRLANKGSSKTGXCNIPETHEDLT 698
H L K + K G C + + E++T
Sbjct: 114 HNLVGKEACKQGVCTVEVSSENMT 137
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 22.6 bits (46), Expect = 4.4
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = +3
Query: 627 HRLANKGSSKTGXCNIPETHEDLT 698
H L K + K G C + + E++T
Sbjct: 114 HNLVGKEACKQGVCTVEVSSENMT 137
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 22.6 bits (46), Expect = 4.4
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +1
Query: 601 GVYYHLNVSTDW 636
G+YYH S DW
Sbjct: 14 GLYYHQRCSRDW 25
>DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 22.2 bits (45), Expect = 5.8
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +1
Query: 25 ILIAKFQSGYLLANPWLF 78
IL+ F YLL W+F
Sbjct: 87 ILVMPFNVAYLLLGKWIF 104
>DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 22.2 bits (45), Expect = 5.8
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +1
Query: 25 ILIAKFQSGYLLANPWLF 78
IL+ F YLL W+F
Sbjct: 87 ILVMPFNVAYLLLGKWIF 104
>AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled
receptor protein.
Length = 399
Score = 22.2 bits (45), Expect = 5.8
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +1
Query: 25 ILIAKFQSGYLLANPWLF 78
IL+ F YLL W+F
Sbjct: 87 ILVMPFNVAYLLLGKWIF 104
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,798
Number of Sequences: 438
Number of extensions: 5079
Number of successful extensions: 18
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25367793
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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