BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brP-1005 (800 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At2g05320.1 68415.m00560 beta-1,2-N-acetylglucosaminyltransferas... 29 2.7 At2g32770.3 68415.m04011 purple acid phosphatase (PAP13) identic... 29 3.6 At2g32770.2 68415.m04012 purple acid phosphatase (PAP13) identic... 29 3.6 At4g20940.1 68417.m03034 leucine-rich repeat family protein cont... 28 6.3 >At2g05320.1 68415.m00560 beta-1,2-N-acetylglucosaminyltransferase II identical to beta-1,2-N-acetylglucosaminyltransferase II GI:10183645 from [Arabidopsis thaliana] Length = 430 Score = 29.5 bits (63), Expect = 2.7 Identities = 14/41 (34%), Positives = 22/41 (53%) Frame = -3 Query: 426 LFLVKHEGFFEK*NKKHQSFKCCKYEN*SRVYRVEKY*NSF 304 L +V H+G+FE+ N+ +S K C+ + Y Y SF Sbjct: 129 LLIVSHDGYFEEMNRIVESIKFCQVKQIFSPYSPHIYRTSF 169 >At2g32770.3 68415.m04011 purple acid phosphatase (PAP13) identical to purple acid phosphatase (PAP13) [Arabidopsis thaliana] GI:20257489; contains Pfam profile PF00149: Ser/Thr protein phosphatase Length = 545 Score = 29.1 bits (62), Expect = 3.6 Identities = 13/37 (35%), Positives = 21/37 (56%) Frame = -3 Query: 282 FIRNLLHSFPPRYANFQYPVPQFLILNSFTIIEHRTD 172 F N SF P Y +F F++LNS+T+ ++ +D Sbjct: 318 FPSNESGSFSPLYYSFNAGGAHFIVLNSYTLYDNSSD 354 >At2g32770.2 68415.m04012 purple acid phosphatase (PAP13) identical to purple acid phosphatase (PAP13) [Arabidopsis thaliana] GI:20257489; contains Pfam profile PF00149: Ser/Thr protein phosphatase Length = 428 Score = 29.1 bits (62), Expect = 3.6 Identities = 13/37 (35%), Positives = 21/37 (56%) Frame = -3 Query: 282 FIRNLLHSFPPRYANFQYPVPQFLILNSFTIIEHRTD 172 F N SF P Y +F F++LNS+T+ ++ +D Sbjct: 237 FPSNESGSFSPLYYSFNAGGAHFIVLNSYTLYDNSSD 273 >At4g20940.1 68417.m03034 leucine-rich repeat family protein contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611; contains similarity to leucine-rich repeat receptor-like protein kinase INRPK1 [Ipomoea nil] gi|14495542|gb|AAB36558 Length = 977 Score = 28.3 bits (60), Expect = 6.3 Identities = 18/70 (25%), Positives = 33/70 (47%) Frame = +1 Query: 586 YLSINGVYYHLNVSTDWQTKAQVKLGVVISPKHTKILHEKNP*SLTPIFKKFKSVIAVSX 765 +L N Y ++ + T ++ GV S KH + H + SLT F+ F+++ + Sbjct: 219 FLLTNASYVDISGNRLVTTSGKLLPGVSESIKHLNLSHNQLEGSLTSGFQLFQNLKVLDL 278 Query: 766 LYSLFQFESP 795 Y++ E P Sbjct: 279 SYNMLSGELP 288 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,019,090 Number of Sequences: 28952 Number of extensions: 329586 Number of successful extensions: 491 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 485 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 491 length of database: 12,070,560 effective HSP length: 80 effective length of database: 9,754,400 effective search space used: 1814318400 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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