Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1004
         (750 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            26   1.1  
X87411-1|CAA60858.1|  599|Anopheles gambiae maltase-like protein...    26   1.4  
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           25   2.5  

>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 14/26 (53%), Positives = 16/26 (61%)
 Frame = +1

Query: 274  ERNPDIATGNTVRTDKAPTARCILRR 351
            E+  DIATGNTVR   A   R +L R
Sbjct: 1263 EQTIDIATGNTVRKAIAADGREVLDR 1288


>X87411-1|CAA60858.1|  599|Anopheles gambiae maltase-like protein
           Agm2 protein.
          Length = 599

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 11/39 (28%), Positives = 15/39 (38%)
 Frame = +3

Query: 438 EWNGTTLQFYNRNFNSPTPSVSGRTGKIYQGWNPETDTW 554
           EWN    QFY   F+   P ++ R   + Q        W
Sbjct: 170 EWNDERKQFYLHQFHKKQPDLNYRNPAVVQAMKDVLRFW 208


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +3

Query: 525 QGWNPETDTWDIKQSTASQEIHKLRKLEL 611
           +GW P+     IK++    E+H  R L+L
Sbjct: 708 KGWGPDYPRQSIKETPCWVEVHLHRALQL 736


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 752,223
Number of Sequences: 2352
Number of extensions: 15716
Number of successful extensions: 37
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)