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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1004
         (750 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U39853-2|AAK39225.1|  771|Caenorhabditis elegans Kinase suppress...    31   1.2  
U38820-1|AAA92436.1|  771|Caenorhabditis elegans KSR-1 protein.        31   1.2  
S80647-1|AAB35769.1|  771|Caenorhabditis elegans KSR-1 protein.        31   1.2  
Z69646-8|CAA93477.3|  896|Caenorhabditis elegans Hypothetical pr...    29   4.7  
Z50794-7|CAA90661.3|  896|Caenorhabditis elegans Hypothetical pr...    29   4.7  
AL110484-27|CAI46626.1|  397|Caenorhabditis elegans Hypothetical...    28   6.2  
AF003136-3|AAO38651.1|  352|Caenorhabditis elegans Hypothetical ...    28   6.2  
AF003136-2|AAK93851.1|  468|Caenorhabditis elegans Hypothetical ...    28   6.2  
AF022982-3|AAB69932.1|  670|Caenorhabditis elegans Hypothetical ...    28   8.1  

>U39853-2|AAK39225.1|  771|Caenorhabditis elegans Kinase suppressor
           of activatedras protein 1 protein.
          Length = 771

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +3

Query: 429 ADTEWNGTTLQFYNRNFNSPTPSVS-GRTGKIYQGWN 536
           A   WN  T+QF    F+   P +  GR GK+ +G++
Sbjct: 460 AQASWNEVTIQFETIEFDKQAPIIGRGRFGKVLRGFH 496


>U38820-1|AAA92436.1|  771|Caenorhabditis elegans KSR-1 protein.
          Length = 771

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +3

Query: 429 ADTEWNGTTLQFYNRNFNSPTPSVS-GRTGKIYQGWN 536
           A   WN  T+QF    F+   P +  GR GK+ +G++
Sbjct: 460 AQASWNEVTIQFETIEFDKQAPIIGRGRFGKVLRGFH 496


>S80647-1|AAB35769.1|  771|Caenorhabditis elegans KSR-1 protein.
          Length = 771

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +3

Query: 429 ADTEWNGTTLQFYNRNFNSPTPSVS-GRTGKIYQGWN 536
           A   WN  T+QF    F+   P +  GR GK+ +G++
Sbjct: 460 AQASWNEVTIQFETIEFDKQAPIIGRGRFGKVLRGFH 496


>Z69646-8|CAA93477.3|  896|Caenorhabditis elegans Hypothetical
           protein F59F5.7 protein.
          Length = 896

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
 Frame = +3

Query: 138 KAVGDNKENKPVDDSTTEISNEQEKEKERVLTPLVRQPLEYIAATXXXXXXXXXXXXQDR 317
           K V +NKENK +D     I   ++KEK   ++  V   L+ ++              +D 
Sbjct: 361 KKVFENKENKNIDPLALPIPEPEKKEK---VSKEVENTLKLLSTMPDEQRKMLESAIKDG 417

Query: 318 Q-GADSPVYPTPPKVTYQKSSNKKK 389
           +  ADSP+     K    + S K+K
Sbjct: 418 EIDADSPLIKNLVKNDVTEESKKEK 442


>Z50794-7|CAA90661.3|  896|Caenorhabditis elegans Hypothetical
           protein F59F5.7 protein.
          Length = 896

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
 Frame = +3

Query: 138 KAVGDNKENKPVDDSTTEISNEQEKEKERVLTPLVRQPLEYIAATXXXXXXXXXXXXQDR 317
           K V +NKENK +D     I   ++KEK   ++  V   L+ ++              +D 
Sbjct: 361 KKVFENKENKNIDPLALPIPEPEKKEK---VSKEVENTLKLLSTMPDEQRKMLESAIKDG 417

Query: 318 Q-GADSPVYPTPPKVTYQKSSNKKK 389
           +  ADSP+     K    + S K+K
Sbjct: 418 EIDADSPLIKNLVKNDVTEESKKEK 442


>AL110484-27|CAI46626.1|  397|Caenorhabditis elegans Hypothetical
           protein Y38E10A.28 protein.
          Length = 397

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +3

Query: 474 NFNSPTPSVSGRTGKIYQGWNPETDTWDIKQSTASQEIHKL 596
           NF+   P VSG      + WN +T  W+I +S A  E+ +L
Sbjct: 358 NFSCVHP-VSGLQWNGRKIWNGKTGKWEIDESPAEHEVFEL 397


>AF003136-3|AAO38651.1|  352|Caenorhabditis elegans Hypothetical
           protein F28B3.5b protein.
          Length = 352

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = +3

Query: 138 KAVGDNKENKPVDDSTTEISNEQEKEKERVLT 233
           K   + +E+K   D    I  EQEKEKE  LT
Sbjct: 197 KITNNRQEDKEQGDREVLIEKEQEKEKEHQLT 228


>AF003136-2|AAK93851.1|  468|Caenorhabditis elegans Hypothetical
           protein F28B3.5a protein.
          Length = 468

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = +3

Query: 138 KAVGDNKENKPVDDSTTEISNEQEKEKERVLT 233
           K   + +E+K   D    I  EQEKEKE  LT
Sbjct: 197 KITNNRQEDKEQGDREVLIEKEQEKEKEHQLT 228


>AF022982-3|AAB69932.1|  670|Caenorhabditis elegans Hypothetical
           protein T23B12.6 protein.
          Length = 670

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
 Frame = -2

Query: 557 VPRVCLGVPALIDLTSSATHARCWGVE--IPIVELQSGTVP 441
           V RV L    LI + S   H R W V     ++  Q GTVP
Sbjct: 444 VQRVSLNTSHLISVCSEYNHVRSWNVTRFRGMINTQPGTVP 484


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,643,289
Number of Sequences: 27780
Number of extensions: 360406
Number of successful extensions: 1295
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1199
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1293
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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