Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1004
(750 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39853-2|AAK39225.1| 771|Caenorhabditis elegans Kinase suppress... 31 1.2
U38820-1|AAA92436.1| 771|Caenorhabditis elegans KSR-1 protein. 31 1.2
S80647-1|AAB35769.1| 771|Caenorhabditis elegans KSR-1 protein. 31 1.2
Z69646-8|CAA93477.3| 896|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z50794-7|CAA90661.3| 896|Caenorhabditis elegans Hypothetical pr... 29 4.7
AL110484-27|CAI46626.1| 397|Caenorhabditis elegans Hypothetical... 28 6.2
AF003136-3|AAO38651.1| 352|Caenorhabditis elegans Hypothetical ... 28 6.2
AF003136-2|AAK93851.1| 468|Caenorhabditis elegans Hypothetical ... 28 6.2
AF022982-3|AAB69932.1| 670|Caenorhabditis elegans Hypothetical ... 28 8.1
>U39853-2|AAK39225.1| 771|Caenorhabditis elegans Kinase suppressor
of activatedras protein 1 protein.
Length = 771
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 429 ADTEWNGTTLQFYNRNFNSPTPSVS-GRTGKIYQGWN 536
A WN T+QF F+ P + GR GK+ +G++
Sbjct: 460 AQASWNEVTIQFETIEFDKQAPIIGRGRFGKVLRGFH 496
>U38820-1|AAA92436.1| 771|Caenorhabditis elegans KSR-1 protein.
Length = 771
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 429 ADTEWNGTTLQFYNRNFNSPTPSVS-GRTGKIYQGWN 536
A WN T+QF F+ P + GR GK+ +G++
Sbjct: 460 AQASWNEVTIQFETIEFDKQAPIIGRGRFGKVLRGFH 496
>S80647-1|AAB35769.1| 771|Caenorhabditis elegans KSR-1 protein.
Length = 771
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 429 ADTEWNGTTLQFYNRNFNSPTPSVS-GRTGKIYQGWN 536
A WN T+QF F+ P + GR GK+ +G++
Sbjct: 460 AQASWNEVTIQFETIEFDKQAPIIGRGRFGKVLRGFH 496
>Z69646-8|CAA93477.3| 896|Caenorhabditis elegans Hypothetical
protein F59F5.7 protein.
Length = 896
Score = 28.7 bits (61), Expect = 4.7
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Frame = +3
Query: 138 KAVGDNKENKPVDDSTTEISNEQEKEKERVLTPLVRQPLEYIAATXXXXXXXXXXXXQDR 317
K V +NKENK +D I ++KEK ++ V L+ ++ +D
Sbjct: 361 KKVFENKENKNIDPLALPIPEPEKKEK---VSKEVENTLKLLSTMPDEQRKMLESAIKDG 417
Query: 318 Q-GADSPVYPTPPKVTYQKSSNKKK 389
+ ADSP+ K + S K+K
Sbjct: 418 EIDADSPLIKNLVKNDVTEESKKEK 442
>Z50794-7|CAA90661.3| 896|Caenorhabditis elegans Hypothetical
protein F59F5.7 protein.
Length = 896
Score = 28.7 bits (61), Expect = 4.7
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Frame = +3
Query: 138 KAVGDNKENKPVDDSTTEISNEQEKEKERVLTPLVRQPLEYIAATXXXXXXXXXXXXQDR 317
K V +NKENK +D I ++KEK ++ V L+ ++ +D
Sbjct: 361 KKVFENKENKNIDPLALPIPEPEKKEK---VSKEVENTLKLLSTMPDEQRKMLESAIKDG 417
Query: 318 Q-GADSPVYPTPPKVTYQKSSNKKK 389
+ ADSP+ K + S K+K
Sbjct: 418 EIDADSPLIKNLVKNDVTEESKKEK 442
>AL110484-27|CAI46626.1| 397|Caenorhabditis elegans Hypothetical
protein Y38E10A.28 protein.
Length = 397
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +3
Query: 474 NFNSPTPSVSGRTGKIYQGWNPETDTWDIKQSTASQEIHKL 596
NF+ P VSG + WN +T W+I +S A E+ +L
Sbjct: 358 NFSCVHP-VSGLQWNGRKIWNGKTGKWEIDESPAEHEVFEL 397
>AF003136-3|AAO38651.1| 352|Caenorhabditis elegans Hypothetical
protein F28B3.5b protein.
Length = 352
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +3
Query: 138 KAVGDNKENKPVDDSTTEISNEQEKEKERVLT 233
K + +E+K D I EQEKEKE LT
Sbjct: 197 KITNNRQEDKEQGDREVLIEKEQEKEKEHQLT 228
>AF003136-2|AAK93851.1| 468|Caenorhabditis elegans Hypothetical
protein F28B3.5a protein.
Length = 468
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +3
Query: 138 KAVGDNKENKPVDDSTTEISNEQEKEKERVLT 233
K + +E+K D I EQEKEKE LT
Sbjct: 197 KITNNRQEDKEQGDREVLIEKEQEKEKEHQLT 228
>AF022982-3|AAB69932.1| 670|Caenorhabditis elegans Hypothetical
protein T23B12.6 protein.
Length = 670
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Frame = -2
Query: 557 VPRVCLGVPALIDLTSSATHARCWGVE--IPIVELQSGTVP 441
V RV L LI + S H R W V ++ Q GTVP
Sbjct: 444 VQRVSLNTSHLISVCSEYNHVRSWNVTRFRGMINTQPGTVP 484
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,643,289
Number of Sequences: 27780
Number of extensions: 360406
Number of successful extensions: 1295
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1199
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1293
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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