Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1003
         (700 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    22   4.2  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    22   4.2  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    22   5.5  
AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like prote...    21   7.3  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   9.7  

>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = -1

Query: 457 KCIVTVITKTAKEYMTTIPCSVLLNTAAENNVTEPPIVE 341
           K + TVI  T   Y+T++    +L     + VT P I++
Sbjct: 32  KVLQTVILGTTCIYLTSLYIWFILTQMTFSGVTSPTIMK 70


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = -1

Query: 457 KCIVTVITKTAKEYMTTIPCSVLLNTAAENNVTEPPIVE 341
           K + TVI  T   Y+T++    +L     + VT P I++
Sbjct: 32  KVLQTVILGTTCIYLTSLYIWFILTQMTFSGVTSPTIMK 70


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -3

Query: 674 MITEDNRVAVAPANDSSPSE 615
           MITED +   AP+ D++ SE
Sbjct: 693 MITEDAQGGDAPSADAAESE 712


>AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like protein
           protein.
          Length = 160

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 17/75 (22%), Positives = 36/75 (48%)
 Frame = -1

Query: 532 AIATSFSPDANTKDINSNNNGQDGTKCIVTVITKTAKEYMTTIPCSVLLNTAAENNVTEP 353
           A   S+SPD   K++  N++      C V V  + A+ +  ++  S + N     N+ + 
Sbjct: 14  AFTASWSPDTLAKNLGINSSFVHKEHCYVLV--RLAR-FRDSVKLSKIPNNV---NLMDV 67

Query: 352 PIVENEKVEIDTINS 308
              E +K+++  ++S
Sbjct: 68  VAREFDKIQVGDVSS 82


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = -3

Query: 128 YYLGHRCSQVKFVTNGILCRL 66
           YYL H C  V     G + RL
Sbjct: 266 YYLSHVCQNVSTEVIGNILRL 286


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,392
Number of Sequences: 336
Number of extensions: 3301
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)