Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1003
         (700 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    25   2.3  
AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.       25   2.3  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            25   3.0  
AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    23   7.0  
DQ370040-1|ABD18601.1|  121|Anopheles gambiae putative TIL domai...    23   9.2  
AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic acetylch...    23   9.2  

>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = -3

Query: 491  YKFEQQWTRRYEMYRNCYNKDSKGVYDDYPMF 396
            YK+ +Q+   ++ Y + YNK+ K   D Y  F
Sbjct: 971  YKYYKQYPHLFKDYFSQYNKNHKYQNDYYEQF 1002


>AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.
          Length = 525

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 22/61 (36%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
 Frame = -1

Query: 412 TTIPCSVL--LNTAAENNVTEPPIVENEKVEIDTINSTTSPFSDDPNQAVALKLTTEGNY 239
           TT+P SV    +T A    T  P   N         +T  P SD PN       TTEGN 
Sbjct: 407 TTMPPSVAPTTSTVAPGTTTTTPTGANP-------GTTQPPTSDAPNHTTT-STTTEGNP 458

Query: 238 G 236
           G
Sbjct: 459 G 459


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 497  QRYKFEQQWTRRYEMYRNCY 438
            QRYK   + T ++ M  NCY
Sbjct: 3105 QRYKSHYKRTSKHSMIENCY 3124


>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = -1

Query: 640 LQMILPPANDSFLSDLVNCTLTISGEKATEVLAIPCAIATSF 515
           + +I+P    SFLS LV    + SGEK +  ++I  ++   F
Sbjct: 244 VNLIIPCVGISFLSVLVFYLPSDSGEKISLCISILLSLTVFF 285


>DQ370040-1|ABD18601.1|  121|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 121

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +3

Query: 636 CRRNCNPVVLC 668
           CRR+CNP   C
Sbjct: 89  CRRSCNPGCFC 99


>AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 8 protein.
          Length = 520

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = -1

Query: 640 LQMILPPANDSFLSDLVNCTLTISGEKATEVLAIPCAIATSF 515
           + +I+P    +FL+ LV    + SGEK T  ++I  ++   F
Sbjct: 250 VNLIIPCVGITFLTVLVFYLPSDSGEKVTLCISILVSLTVFF 291


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 663,209
Number of Sequences: 2352
Number of extensions: 12923
Number of successful extensions: 26
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)