Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1002
         (750 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       30   0.066
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           23   7.6  
AJ302656-1|CAC35521.1|  385|Anopheles gambiae gSG1b protein prot...    23   7.6  

>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 30.3 bits (65), Expect = 0.066
 Identities = 15/52 (28%), Positives = 26/52 (50%)
 Frame = -3

Query: 718 VPFKSIPFTNGVWAKKTNLVGETSNSSLETRSAPREE*HRLTDDSRIYRFGS 563
           +P  ++P T+ +    T L+  +SN++L+T     E  HR    SR   F +
Sbjct: 538 LPTTTVPITDAITPDDTELLQASSNTNLKTVLRAEEVRHRTKRQSRTVNFNA 589


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +1

Query: 364 VTLRIYSAERPASTWIRRNRDTR 432
           VT    S  +P STW+ RN DTR
Sbjct: 233 VTFASSSIAQP-STWLVRNTDTR 254


>AJ302656-1|CAC35521.1|  385|Anopheles gambiae gSG1b protein
           protein.
          Length = 385

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = +3

Query: 147 GILPEIGFQMRDEVSDNRFPRFTLDLHVNTKEKKYHL 257
           G +PE   Q       NR+P+    ++ NT+  + H+
Sbjct: 130 GRIPEAMTQFLMLAGWNRWPQIVAQIYQNTRRDRQHI 166


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 793,083
Number of Sequences: 2352
Number of extensions: 16592
Number of successful extensions: 29
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)