Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1001
(423 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P49630 Cluster: 60S ribosomal protein L36 (Protein minu... 134 5e-31
UniRef50_Q1G198 Cluster: 60S ribosomal protein L36; n=1; Leptino... 128 3e-29
UniRef50_Q9Y3U8 Cluster: 60S ribosomal protein L36; n=47; Eutele... 124 1e-27
UniRef50_P49181 Cluster: 60S ribosomal protein L36; n=18; Fungi/... 101 6e-21
UniRef50_A2ZZF6 Cluster: 60S ribosomal protein L36; n=9; Eukaryo... 98 6e-20
UniRef50_O80929 Cluster: 60S ribosomal protein L36-1; n=18; Euka... 97 2e-19
UniRef50_Q5KEE1 Cluster: 60S ribosomal protein L36; n=2; Dikarya... 89 3e-17
UniRef50_Q7XY66 Cluster: Putative 60S ribosomal protein L36; n=1... 83 3e-15
UniRef50_Q92365 Cluster: 60S ribosomal protein L36-A; n=2; Schiz... 82 4e-15
UniRef50_UPI0000604754 Cluster: PREDICTED: similar to rat riboso... 77 2e-13
UniRef50_A7ATP0 Cluster: 60S ribosomal protein L36; n=3; Piropla... 77 2e-13
UniRef50_UPI00005A004D Cluster: PREDICTED: similar to ribosomal ... 74 1e-12
UniRef50_UPI0000EBDDF6 Cluster: PREDICTED: similar to rat riboso... 72 4e-12
UniRef50_P05745 Cluster: 60S ribosomal protein L36-A; n=26; Fung... 72 4e-12
UniRef50_Q8I713 Cluster: 60S Ribosomal protein L36, putative; n=... 68 9e-11
UniRef50_Q7R9S3 Cluster: 60S ribosomal protein L36; n=2; Plasmod... 66 2e-10
UniRef50_P52866 Cluster: 60S ribosomal protein L36; n=13; Eukary... 65 6e-10
UniRef50_Q55AQ9 Cluster: 60S ribosomal protein L36; n=2; Dictyos... 64 1e-09
UniRef50_Q9BYF3 Cluster: 60S ribosomal protein L36; n=5; Amniota... 64 1e-09
UniRef50_A0DT55 Cluster: 60S ribosomal protein L36; n=5; Oligohy... 62 6e-09
UniRef50_Q7QRE6 Cluster: 60S ribosomal protein L36; n=1; Giardia... 61 8e-09
UniRef50_Q38CY6 Cluster: 60S ribosomal protein L36; n=2; Trypano... 60 2e-08
UniRef50_Q4QCE1 Cluster: 60S ribosomal protein l36, putative; n=... 60 2e-08
UniRef50_A2F3E0 Cluster: Ribosomal protein L36e, putative; n=4; ... 60 2e-08
UniRef50_Q16KP4 Cluster: 60S ribosomal protein L36; n=1; Aedes a... 58 6e-08
UniRef50_UPI00015538C3 Cluster: PREDICTED: similar to 60S riboso... 54 1e-06
UniRef50_Q8SRP1 Cluster: 60S RIBOSOMAL PROTEIN L36; n=1; Encepha... 48 1e-04
UniRef50_A1BQ89 Cluster: 60S ribosomal protein L36; n=1; Strongy... 47 1e-04
UniRef50_Q8S8Z4 Cluster: 60S ribosomal protein L36 homolog; n=1;... 45 6e-04
UniRef50_O15623 Cluster: 60S ribosomal protein L36; n=3; Entamoe... 42 0.004
UniRef50_Q9AW14 Cluster: 60S ribosomal protein L36; n=1; Guillar... 39 0.048
UniRef50_UPI0000D569F8 Cluster: PREDICTED: similar to CG8461-PA;... 36 0.45
UniRef50_Q9U919 Cluster: PTGT-4 protein; n=1; Trypanosoma brucei... 35 0.79
UniRef50_A7TBW5 Cluster: Predicted protein; n=1; Nematostella ve... 35 0.79
UniRef50_A1CYX3 Cluster: 60S ribosomal protein L24b; n=4; Euroti... 34 1.4
UniRef50_A2BM16 Cluster: Predicted Rad50; n=1; Hyperthermus buty... 33 1.8
UniRef50_Q2FTZ5 Cluster: Putative uncharacterized protein; n=1; ... 32 5.6
UniRef50_Q2L2W5 Cluster: Phage protein; n=1; Bordetella avium 19... 31 7.4
UniRef50_Q5CZ07 Cluster: Putative uncharacterized protein; n=2; ... 31 7.4
UniRef50_Q0UBN7 Cluster: Putative uncharacterized protein; n=1; ... 31 7.4
UniRef50_Q4QBA5 Cluster: Putative uncharacterized protein; n=7; ... 31 9.7
UniRef50_A6SKL1 Cluster: Putative uncharacterized protein; n=1; ... 31 9.7
UniRef50_Q8NFC6 Cluster: Protein FAM44A; n=9; Eutheria|Rep: Prot... 31 9.7
>UniRef50_P49630 Cluster: 60S ribosomal protein L36 (Protein
minute(1)1B); n=18; Coelomata|Rep: 60S ribosomal protein
L36 (Protein minute(1)1B) - Drosophila melanogaster
(Fruit fly)
Length = 115
Score = 134 bits (325), Expect = 5e-31
Identities = 63/76 (82%), Positives = 71/76 (93%)
Frame = +1
Query: 115 IRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRA 294
+R +RLK +QT+H+KF+RDLVREVVGHA YEKR MELLKVSKDKRALKFLKRRLGTHIRA
Sbjct: 34 LRGSRLKNIQTRHTKFMRDLVREVVGHAPYEKRTMELLKVSKDKRALKFLKRRLGTHIRA 93
Query: 295 KRKREELSNVLAQMRK 342
KRKREELSN+L Q+RK
Sbjct: 94 KRKREELSNILTQLRK 109
Score = 35.5 bits (78), Expect = 0.45
Identities = 14/20 (70%), Positives = 18/20 (90%)
Frame = +3
Query: 15 MAPRFEIAVGLRKGHKTTKI 74
MA R+E+A+GL KGHKT+KI
Sbjct: 1 MAVRYELAIGLNKGHKTSKI 20
>UniRef50_Q1G198 Cluster: 60S ribosomal protein L36; n=1;
Leptinotarsa decemlineata|Rep: 60S ribosomal protein L36
- Leptinotarsa decemlineata (Colorado potato beetle)
Length = 84
Score = 128 bits (310), Expect = 3e-29
Identities = 61/77 (79%), Positives = 66/77 (85%)
Frame = +1
Query: 112 RIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIR 291
R P RLKG+QTKH+KFVRD++REVVGH EKR ELLKV KDKRALKFLKRRLGTHIR
Sbjct: 3 RFEPERLKGIQTKHTKFVRDIIREVVGHXPXEKRXXELLKVXKDKRALKFLKRRLGTHIR 62
Query: 292 AKRKREELSNVLAQMRK 342
AKRKREELSN+L QM K
Sbjct: 63 AKRKREELSNILTQMGK 79
>UniRef50_Q9Y3U8 Cluster: 60S ribosomal protein L36; n=47;
Euteleostomi|Rep: 60S ribosomal protein L36 - Homo
sapiens (Human)
Length = 105
Score = 124 bits (298), Expect = 1e-27
Identities = 62/97 (63%), Positives = 78/97 (80%), Gaps = 5/97 (5%)
Frame = +1
Query: 67 LKYPLAARVSQYKAI-----RIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLK 231
L+YP+A +++ + + R +R +G TKH+KFVRD++REV G A YE+RAMELLK
Sbjct: 3 LRYPMAVGLNKGHKVTKNVSKPRHSRRRGRLTKHTKFVRDMIREVCGFAPYERRAMELLK 62
Query: 232 VSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 342
VSKDKRALKF+K+R+GTHIRAKRKREELSNVLA MRK
Sbjct: 63 VSKDKRALKFIKKRVGTHIRAKRKREELSNVLAAMRK 99
>UniRef50_P49181 Cluster: 60S ribosomal protein L36; n=18;
Fungi/Metazoa group|Rep: 60S ribosomal protein L36 -
Caenorhabditis elegans
Length = 104
Score = 101 bits (242), Expect = 6e-21
Identities = 47/78 (60%), Positives = 61/78 (78%)
Frame = +1
Query: 109 IRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHI 288
++ R R KG+ +K +K VR+LVRE+ G A YE+R +E+L++SKDKRALKFLKRR+GTH
Sbjct: 24 VKQRQNRHKGVASKKTKIVRELVREITGFAPYERRVLEMLRISKDKRALKFLKRRIGTHR 83
Query: 289 RAKRKREELSNVLAQMRK 342
RAK KREEL NV+ RK
Sbjct: 84 RAKGKREELQNVIIAQRK 101
>UniRef50_A2ZZF6 Cluster: 60S ribosomal protein L36; n=9;
Eukaryota|Rep: 60S ribosomal protein L36 - Oryza sativa
subsp. japonica (Rice)
Length = 143
Score = 98.3 bits (234), Expect = 6e-20
Identities = 48/74 (64%), Positives = 56/74 (75%)
Frame = +1
Query: 118 RPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAK 297
RP+ KG TK FVR L+REVVG A YEKR ELLKV KDKRALK KR+LGTH RAK
Sbjct: 28 RPSDRKGKSTKRVNFVRGLIREVVGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAK 87
Query: 298 RKREELSNVLAQMR 339
+KREE++ V+ +MR
Sbjct: 88 KKREEMAGVIRKMR 101
>UniRef50_O80929 Cluster: 60S ribosomal protein L36-1; n=18;
Eukaryota|Rep: 60S ribosomal protein L36-1 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 113
Score = 96.7 bits (230), Expect = 2e-19
Identities = 48/74 (64%), Positives = 56/74 (75%)
Frame = +1
Query: 118 RPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAK 297
RP KG +K + F+R L+REV G A YEKR ELLKV KDKRALK KR+LGTH RAK
Sbjct: 28 RPNSRKGKTSKRTIFIRKLIREVAGMAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAK 87
Query: 298 RKREELSNVLAQMR 339
RKREE+S+VL +MR
Sbjct: 88 RKREEMSSVLRKMR 101
>UniRef50_Q5KEE1 Cluster: 60S ribosomal protein L36; n=2;
Dikarya|Rep: 60S ribosomal protein L36 - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 197
Score = 89.0 bits (211), Expect = 3e-17
Identities = 42/75 (56%), Positives = 56/75 (74%)
Frame = +1
Query: 118 RPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAK 297
RP+ KGL+T+ FVR ++REV G + YEKR MELL+ SKDK+A K K+RLGT +R+K
Sbjct: 120 RPSNKKGLKTEKKTFVRSVIREVAGFSPYEKRVMELLRNSKDKKAKKLTKKRLGTLLRSK 179
Query: 298 RKREELSNVLAQMRK 342
RK EELS V+ + R+
Sbjct: 180 RKIEELSAVIVEQRR 194
>UniRef50_Q7XY66 Cluster: Putative 60S ribosomal protein L36; n=1;
Griffithsia japonica|Rep: Putative 60S ribosomal protein
L36 - Griffithsia japonica (Red alga)
Length = 94
Score = 82.6 bits (195), Expect = 3e-15
Identities = 37/66 (56%), Positives = 49/66 (74%)
Frame = +1
Query: 142 QTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSN 321
Q+ + VR ++ EV G A YEKR +ELL++ KDKRALKF K+RLGTH+RAKRKRE+++
Sbjct: 28 QSPRLQVVRSVINEVCGFAPYEKRVIELLRIGKDKRALKFAKKRLGTHLRAKRKREQMAE 87
Query: 322 VLAQMR 339
L R
Sbjct: 88 ALRSKR 93
>UniRef50_Q92365 Cluster: 60S ribosomal protein L36-A; n=2;
Schizosaccharomyces pombe|Rep: 60S ribosomal protein
L36-A - Schizosaccharomyces pombe (Fission yeast)
Length = 99
Score = 82.2 bits (194), Expect = 4e-15
Identities = 41/74 (55%), Positives = 53/74 (71%)
Frame = +1
Query: 118 RPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAK 297
RP+R KG +K + FVR +VREV G A YE+R MEL++ S+DKRA K K+RLGT RAK
Sbjct: 23 RPSRRKGQLSKRTSFVRSIVREVAGFAPYERRVMELIRNSQDKRARKLAKKRLGTLKRAK 82
Query: 298 RKREELSNVLAQMR 339
K EEL++V+ R
Sbjct: 83 GKIEELTSVIQSSR 96
>UniRef50_UPI0000604754 Cluster: PREDICTED: similar to rat ribosomal
protein L36; n=8; Eutheria|Rep: PREDICTED: similar to
rat ribosomal protein L36 - Mus musculus
Length = 105
Score = 76.6 bits (180), Expect = 2e-13
Identities = 38/68 (55%), Positives = 48/68 (70%)
Frame = +1
Query: 139 LQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELS 318
L TKH+KFV+D++REV Y+ + L KVS DK A KF+K+R+G HI KRK EELS
Sbjct: 32 LLTKHTKFVQDMIREVCDFMSYDWCTVVLPKVSNDKCAFKFIKKRVGMHIHTKRKWEELS 91
Query: 319 NVLAQMRK 342
V+A MRK
Sbjct: 92 IVIAAMRK 99
>UniRef50_A7ATP0 Cluster: 60S ribosomal protein L36; n=3;
Piroplasmida|Rep: 60S ribosomal protein L36 - Babesia
bovis
Length = 116
Score = 76.6 bits (180), Expect = 2e-13
Identities = 39/79 (49%), Positives = 53/79 (67%), Gaps = 3/79 (3%)
Frame = +1
Query: 115 IRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLK---VSKDKRALKFLKRRLGTH 285
+RP+R KGL+TK + V +++REV G A YE+ +EL+K S KRALKF K+RLGT
Sbjct: 35 VRPSRKKGLKTKRNALVSEVIREVCGFAPYERHMIELIKTGSASAQKRALKFAKKRLGTL 94
Query: 286 IRAKRKREELSNVLAQMRK 342
RAK K +E+ V+ RK
Sbjct: 95 RRAKTKNDEMMRVVELQRK 113
Score = 31.1 bits (67), Expect = 9.7
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = +3
Query: 3 QSEIMAPRFEIAVGLRKGHKTTKI 74
+ +I APR IAVGL KGH TT I
Sbjct: 6 EMKIEAPRSGIAVGLNKGHITTPI 29
>UniRef50_UPI00005A004D Cluster: PREDICTED: similar to ribosomal
protein L36; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L36 - Canis familiaris
Length = 107
Score = 73.7 bits (173), Expect = 1e-12
Identities = 33/46 (71%), Positives = 42/46 (91%)
Frame = +1
Query: 205 EKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 342
++RAMELLKVSKDKR L+ +K+R+GTH+RAKR+ EELSNVLA +RK
Sbjct: 56 QRRAMELLKVSKDKRTLRLIKKRVGTHVRAKRETEELSNVLAAIRK 101
>UniRef50_UPI0000EBDDF6 Cluster: PREDICTED: similar to rat ribosomal
protein L36; n=1; Bos taurus|Rep: PREDICTED: similar to
rat ribosomal protein L36 - Bos taurus
Length = 131
Score = 72.1 bits (169), Expect = 4e-12
Identities = 37/66 (56%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Frame = +1
Query: 148 KHS-KFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNV 324
KH+ +F +D+++EV A E+ A E KVSKDK+ALKF+++ LGTHI AKRK ELSNV
Sbjct: 40 KHTTEFSQDVIQEVFSFALNEQHATEQFKVSKDKQALKFIQKMLGTHICAKRKARELSNV 99
Query: 325 LAQMRK 342
LA R+
Sbjct: 100 LATTRE 105
>UniRef50_P05745 Cluster: 60S ribosomal protein L36-A; n=26;
Fungi/Metazoa group|Rep: 60S ribosomal protein L36-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 100
Score = 72.1 bits (169), Expect = 4e-12
Identities = 33/70 (47%), Positives = 50/70 (71%)
Frame = +1
Query: 133 KGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREE 312
KG + +KFVR LVRE+ G + YE+R ++L++ S +KRA K K+RLG+ RAK K EE
Sbjct: 30 KGAASNRTKFVRSLVREIAGLSPYERRLIDLIRNSGEKRARKVAKKRLGSFTRAKAKVEE 89
Query: 313 LSNVLAQMRK 342
++N++A R+
Sbjct: 90 MNNIIAASRR 99
>UniRef50_Q8I713 Cluster: 60S Ribosomal protein L36, putative; n=2;
Plasmodium|Rep: 60S Ribosomal protein L36, putative -
Plasmodium falciparum (isolate 3D7)
Length = 130
Score = 67.7 bits (158), Expect = 9e-11
Identities = 30/69 (43%), Positives = 48/69 (69%), Gaps = 3/69 (4%)
Frame = +1
Query: 145 TKHSKFVRDLVREVVGHAQYEKRAMELLKV---SKDKRALKFLKRRLGTHIRAKRKREEL 315
+K + ++D+VRE+ G + YEKR +EL+K+ + KR+LK+ K++LGTH R K KREE+
Sbjct: 56 SKRKELIKDVVREITGFSPYEKRIIELIKIGTSASTKRSLKYAKKKLGTHKRGKAKREEI 115
Query: 316 SNVLAQMRK 342
V+ R+
Sbjct: 116 QKVVILQRR 124
>UniRef50_Q7R9S3 Cluster: 60S ribosomal protein L36; n=2;
Plasmodium|Rep: 60S ribosomal protein L36 - Plasmodium
yoelii yoelii
Length = 113
Score = 66.5 bits (155), Expect = 2e-10
Identities = 30/68 (44%), Positives = 45/68 (66%), Gaps = 3/68 (4%)
Frame = +1
Query: 148 KHSKFVRDLVREVVGHAQYEKRAMELLKVSKD---KRALKFLKRRLGTHIRAKRKREELS 318
K+ + D+VRE+ G + YEKR +EL+KV KR+LK+ K++LGTH R K KREE+
Sbjct: 39 KNKDLINDVVREIAGFSPYEKRLIELIKVGTSAATKRSLKYAKKKLGTHKRGKAKREEIQ 98
Query: 319 NVLAQMRK 342
++ R+
Sbjct: 99 KIVMMQRR 106
>UniRef50_P52866 Cluster: 60S ribosomal protein L36; n=13;
Eukaryota|Rep: 60S ribosomal protein L36 - Daucus carota
(Carrot)
Length = 106
Score = 64.9 bits (151), Expect = 6e-10
Identities = 33/69 (47%), Positives = 45/69 (65%)
Frame = +1
Query: 103 KAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGT 282
K + RP+ KG +K + FVR+L+REV G YEKR ELLKV KDKRALK + ++G
Sbjct: 23 KELAPRPSDRKGKTSKRTHFVRNLIREVAGFXPYEKRITELLKVGKDKRALKVRQEKVG- 81
Query: 283 HIRAKRKRE 309
H + ++ E
Sbjct: 82 HSQESKEEE 90
>UniRef50_Q55AQ9 Cluster: 60S ribosomal protein L36; n=2;
Dictyostelium discoideum|Rep: 60S ribosomal protein L36
- Dictyostelium discoideum AX4
Length = 105
Score = 64.1 bits (149), Expect = 1e-09
Identities = 29/64 (45%), Positives = 44/64 (68%)
Frame = +1
Query: 133 KGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREE 312
K + TK +RD++RE+ G + YE+R ELLK DKRALK K+RLG+ K+KR++
Sbjct: 35 KQVVTKRVAAIRDVIREISGFSPYERRVSELLKSGLDKRALKVAKKRLGSIQAGKKKRDD 94
Query: 313 LSNV 324
++N+
Sbjct: 95 IANI 98
>UniRef50_Q9BYF3 Cluster: 60S ribosomal protein L36; n=5;
Amniota|Rep: 60S ribosomal protein L36 - Homo sapiens
(Human)
Length = 32
Score = 63.7 bits (148), Expect = 1e-09
Identities = 29/32 (90%), Positives = 32/32 (100%)
Frame = +1
Query: 226 LKVSKDKRALKFLKRRLGTHIRAKRKREELSN 321
LKVSKDKRALKF+K+R+GTHIRAKRKREELSN
Sbjct: 1 LKVSKDKRALKFIKKRVGTHIRAKRKREELSN 32
>UniRef50_A0DT55 Cluster: 60S ribosomal protein L36; n=5;
Oligohymenophorea|Rep: 60S ribosomal protein L36 -
Paramecium tetraurelia
Length = 110
Score = 61.7 bits (143), Expect = 6e-09
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 3/83 (3%)
Frame = +1
Query: 103 KAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVS--KD-KRALKFLKRR 273
K +R RP++ KG K VR +++EV G + YEKR +EL K + KD K+A K +R
Sbjct: 22 KQLRRRPSQRKGTLGKRVLSVRKVIQEVAGLSPYEKRIIELFKTNQPKDLKKAGKLAAKR 81
Query: 274 LGTHIRAKRKREELSNVLAQMRK 342
LGT+ R KRK E + N+ MRK
Sbjct: 82 LGTNRRGKRKIELVQNLYRAMRK 104
>UniRef50_Q7QRE6 Cluster: 60S ribosomal protein L36; n=1; Giardia
lamblia ATCC 50803|Rep: 60S ribosomal protein L36 -
Giardia lamblia ATCC 50803
Length = 90
Score = 61.3 bits (142), Expect = 8e-09
Identities = 26/56 (46%), Positives = 41/56 (73%)
Frame = +1
Query: 151 HSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELS 318
H +FV+ +++E G A YE +ELL+++KD+ AL++ K+RLG RAK KR++LS
Sbjct: 29 HQEFVKSIIQECTGMAPYEMHIIELLRMNKDRHALRYAKKRLGNIKRAKAKRDQLS 84
>UniRef50_Q38CY6 Cluster: 60S ribosomal protein L36; n=2;
Trypanosoma brucei|Rep: 60S ribosomal protein L36 -
Trypanosoma brucei
Length = 109
Score = 60.1 bits (139), Expect = 2e-08
Identities = 29/68 (42%), Positives = 44/68 (64%)
Frame = +1
Query: 139 LQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELS 318
L K + V+ ++ ++VG + E+R ELL+V KDKRALKF K+RLG+ AK++R ++
Sbjct: 40 LPHKKLRAVKAIISDLVGFSPMERRVQELLRVGKDKRALKFCKKRLGSIKAAKKRRAKVE 99
Query: 319 NVLAQMRK 342
L Q K
Sbjct: 100 EALRQQTK 107
>UniRef50_Q4QCE1 Cluster: 60S ribosomal protein l36, putative; n=9;
Trypanosomatidae|Rep: 60S ribosomal protein l36,
putative - Leishmania major
Length = 105
Score = 59.7 bits (138), Expect = 2e-08
Identities = 27/65 (41%), Positives = 41/65 (63%)
Frame = +1
Query: 148 KHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVL 327
KH + V+ ++ ++VG + EKR E L+V K+KRALK+ K+RLG AK+KR ++ L
Sbjct: 38 KHLRAVKAIIADLVGLSPLEKRVQEFLRVGKEKRALKYCKKRLGDFTAAKKKRSKMEEAL 97
Query: 328 AQMRK 342
K
Sbjct: 98 RHATK 102
>UniRef50_A2F3E0 Cluster: Ribosomal protein L36e, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein L36e,
putative - Trichomonas vaginalis G3
Length = 93
Score = 59.7 bits (138), Expect = 2e-08
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Frame = +1
Query: 115 IRPARLKGLQT--KHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHI 288
+ P R GL + K F R +V E+VG YE+ M+L+K+ + + A +FLK+RLGTH
Sbjct: 11 LAPKRECGLHSSGKRVNFARKIVHELVGWQPYERHTMDLIKIERRRAARQFLKKRLGTHR 70
Query: 289 RAKRKREELSNVLAQ 333
RA +K L V+ +
Sbjct: 71 RAMKKLNTLEEVVQE 85
>UniRef50_Q16KP4 Cluster: 60S ribosomal protein L36; n=1; Aedes
aegypti|Rep: 60S ribosomal protein L36 - Aedes aegypti
(Yellowfever mosquito)
Length = 86
Score = 58.4 bits (135), Expect = 6e-08
Identities = 33/69 (47%), Positives = 47/69 (68%)
Frame = +1
Query: 88 RVSQYKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLK 267
R QY+ R+ +R +QTK +K VRDL+ EVV HA ++K+ M+LLKV +DK AL+F+
Sbjct: 22 RQIQYREDRL--SRTNEIQTKLTKLVRDLIHEVVVHATFKKKDMQLLKVFQDKLALRFMS 79
Query: 268 RRLGTHIRA 294
+HIRA
Sbjct: 80 G--PSHIRA 86
>UniRef50_UPI00015538C3 Cluster: PREDICTED: similar to 60S ribosomal
protein L36; n=1; Mus musculus|Rep: PREDICTED: similar
to 60S ribosomal protein L36 - Mus musculus
Length = 129
Score = 54.0 bits (124), Expect = 1e-06
Identities = 29/65 (44%), Positives = 42/65 (64%)
Frame = +1
Query: 55 ATKQLKYPLAARVSQYKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKV 234
A + L YP+A ++ K ++R ++ G TKH+KF+ + RE+ G A YE RA ELLKV
Sbjct: 57 AARALHYPMAVGLN--KGHKVRHSQCHGSLTKHTKFMWGVNREMCGFASYEWRATELLKV 114
Query: 235 SKDKR 249
SK K+
Sbjct: 115 SKRKK 119
>UniRef50_Q8SRP1 Cluster: 60S RIBOSOMAL PROTEIN L36; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L36
- Encephalitozoon cuniculi
Length = 107
Score = 47.6 bits (108), Expect = 1e-04
Identities = 31/98 (31%), Positives = 55/98 (56%), Gaps = 11/98 (11%)
Frame = +1
Query: 73 YPLAARVSQYKAIRIR-PARLKGL---------QTKHSKFVRDLVR-EVVGHAQYEKRAM 219
+P A + YK +R+R P + + +T+ S+F+ V E+ G + EK+A+
Sbjct: 9 FPDPAMKNAYKKVRVRYPVKRPDVKRKQRGPRAETQESRFLAAAVADEISGLSPLEKKAI 68
Query: 220 ELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQ 333
LL+ + +A K L++RLG+H RA K E+L+ +L +
Sbjct: 69 SLLEAKNNNKAQKLLRKRLGSHKRAVAKVEKLARMLLE 106
>UniRef50_A1BQ89 Cluster: 60S ribosomal protein L36; n=1;
Strongyloides ratti|Rep: 60S ribosomal protein L36 -
Strongyloides ratti
Length = 91
Score = 47.2 bits (107), Expect = 1e-04
Identities = 23/43 (53%), Positives = 30/43 (69%)
Frame = +1
Query: 106 AIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKV 234
A ++R R +G TK +K VR+LVRE+ G A YE+R MELL V
Sbjct: 24 ARKMRQNRKRGAATKKTKVVRELVREITGFAPYERRMMELLLV 66
>UniRef50_Q8S8Z4 Cluster: 60S ribosomal protein L36 homolog; n=1;
Allium cepa|Rep: 60S ribosomal protein L36 homolog -
Allium cepa (Onion)
Length = 64
Score = 45.2 bits (102), Expect = 6e-04
Identities = 22/36 (61%), Positives = 28/36 (77%)
Frame = +1
Query: 232 VSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMR 339
V+K + L+ R+LGTH RAKRKREE+SNVL +MR
Sbjct: 20 VTKRELPLRPSSRKLGTHKRAKRKREEMSNVLRKMR 55
>UniRef50_O15623 Cluster: 60S ribosomal protein L36; n=3; Entamoeba
histolytica|Rep: 60S ribosomal protein L36 - Entamoeba
histolytica
Length = 103
Score = 42.3 bits (95), Expect = 0.004
Identities = 23/66 (34%), Positives = 34/66 (51%)
Frame = +1
Query: 145 TKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNV 324
TK V D++RE G YE+ M+LL+ DK+AL + K+ + + E SNV
Sbjct: 25 TKRKHVVNDVIREACGFPAYERHMMDLLRRGLDKKALNYAKKTSWYTQKRTCQAEMKSNV 84
Query: 325 LAQMRK 342
L + K
Sbjct: 85 LLEAIK 90
>UniRef50_Q9AW14 Cluster: 60S ribosomal protein L36; n=1; Guillardia
theta|Rep: 60S ribosomal protein L36 - Guillardia theta
(Cryptomonas phi)
Length = 75
Score = 38.7 bits (86), Expect = 0.048
Identities = 18/63 (28%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Frame = +1
Query: 142 QTKHSKF-VRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELS 318
+T KF + ++ G ++EK+ +K+ +++ALK K++LG RAK+K + ++
Sbjct: 9 KTNFKKFNINVVLTSTFGLNEFEKKITNYIKLGYEQKALKMSKKKLGNLQRAKKKIDSIN 68
Query: 319 NVL 327
++L
Sbjct: 69 HIL 71
>UniRef50_UPI0000D569F8 Cluster: PREDICTED: similar to CG8461-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG8461-PA - Tribolium castaneum
Length = 235
Score = 35.5 bits (78), Expect = 0.45
Identities = 21/56 (37%), Positives = 33/56 (58%)
Frame = +1
Query: 148 KHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREEL 315
K KFV DL + Q + + ++ LK ++DK+ +KF+ RRL IR + K+E L
Sbjct: 112 KDYKFVNDLRK------QEKTQLLKQLKETEDKKKIKFVIRRLENQIREEEKKERL 161
>UniRef50_Q9U919 Cluster: PTGT-4 protein; n=1; Trypanosoma
brucei|Rep: PTGT-4 protein - Trypanosoma brucei
Length = 508
Score = 34.7 bits (76), Expect = 0.79
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = -3
Query: 373 NGDGDEPGRLPSSSERARC*VLHASSWRGCVCPIVASRTS 254
+G GD P + P SS + RC L SSWR I +RT+
Sbjct: 99 HGKGDRPSQKPKSSSQKRCRHLSGSSWREPRRTIAPARTA 138
>UniRef50_A7TBW5 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 208
Score = 34.7 bits (76), Expect = 0.79
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +3
Query: 15 MAPRFEIAVGLRKGHKTTK 71
MAP+ E+AVGL+KGHK TK
Sbjct: 155 MAPKVEMAVGLQKGHKVTK 173
>UniRef50_A1CYX3 Cluster: 60S ribosomal protein L24b; n=4;
Eurotiomycetidae|Rep: 60S ribosomal protein L24b -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 188
Score = 33.9 bits (74), Expect = 1.4
Identities = 17/41 (41%), Positives = 26/41 (63%)
Frame = +1
Query: 211 RAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQ 333
+AME ++ + +R F KRRLG + +RKREE V+A+
Sbjct: 94 KAMERVEEIRARRERAFTKRRLGGKLARERKREEDRRVVAE 134
>UniRef50_A2BM16 Cluster: Predicted Rad50; n=1; Hyperthermus
butylicus DSM 5456|Rep: Predicted Rad50 - Hyperthermus
butylicus (strain DSM 5456 / JCM 9403)
Length = 887
Score = 33.5 bits (73), Expect = 1.8
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Frame = +1
Query: 124 ARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRL----GTHIR 291
ARL+ L+T+ +K + H +YE+ EL K+ + + LKRRL +
Sbjct: 532 ARLEELRTEQAKLSERRLELFEKHKEYEEARKELEKLGQAVVEYRVLKRRLEELEKRRVE 591
Query: 292 AKRKREEL 315
A+R REEL
Sbjct: 592 AERLREEL 599
>UniRef50_Q2FTZ5 Cluster: Putative uncharacterized protein; n=1;
Methanospirillum hungatei JF-1|Rep: Putative
uncharacterized protein - Methanospirillum hungatei
(strain JF-1 / DSM 864)
Length = 540
Score = 31.9 bits (69), Expect = 5.6
Identities = 18/57 (31%), Positives = 33/57 (57%)
Frame = +1
Query: 166 RDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQM 336
R+L+ ++G + A+ LLK D + F + R+ H+ A K EE++N+LA++
Sbjct: 62 RELLLTLLGD---HEEAIHLLKEIDDLKKSPFSQFRIARHLGALGKHEEMNNLLARL 115
>UniRef50_Q2L2W5 Cluster: Phage protein; n=1; Bordetella avium
197N|Rep: Phage protein - Bordetella avium (strain 197N)
Length = 416
Score = 31.5 bits (68), Expect = 7.4
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +1
Query: 25 VLKSQ*ACEKATKQLKYPLAARVSQYKA-IRIRPARLKGLQTKHSKFVRDLVREVVGHAQ 201
V ++Q A E+ + AA + A +R ARL G+QTKH+K D V+ AQ
Sbjct: 257 VTEAQAAVEEVQAAAEEVQAAPTADSIAKLRAAQARLAGIQTKHAKAAADAATAVIKRAQ 316
>UniRef50_Q5CZ07 Cluster: Putative uncharacterized protein; n=2;
Cryptosporidium|Rep: Putative uncharacterized protein -
Cryptosporidium parvum Iowa II
Length = 458
Score = 31.5 bits (68), Expect = 7.4
Identities = 14/46 (30%), Positives = 27/46 (58%)
Frame = +1
Query: 178 REVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREEL 315
R++ + EKR E L++ K++ L+ K + +R K+++EEL
Sbjct: 85 RKIKERKEREKREQEELRLKKEQEELRLKKEKEQEELRLKKEQEEL 130
>UniRef50_Q0UBN7 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 723
Score = 31.5 bits (68), Expect = 7.4
Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = -2
Query: 314 SSSRFLLARMCVPNRRFKNFR--ARLSFDTLSNSIALFSY 201
++S L+ R CV RF+ FR +R +FDTLS L SY
Sbjct: 489 TNSHDLIMRTCVTYLRFRPFRIDSRNTFDTLSARYPLLSY 528
>UniRef50_Q4QBA5 Cluster: Putative uncharacterized protein; n=7;
cellular organisms|Rep: Putative uncharacterized protein
- Leishmania major
Length = 1241
Score = 31.1 bits (67), Expect = 9.7
Identities = 19/63 (30%), Positives = 27/63 (42%)
Frame = -3
Query: 352 GRLPSSSERARC*VLHASSWRGCVCPIVASRTSEHACLLTP*VTP*PSSHIERVRQLRVL 173
G LP S ++C LH+SSWR C R S ++C + P P + +
Sbjct: 41 GSLPPSPSTSQC-NLHSSSWRSC---RALRRCSSYSCAIPSSADPYPQHGLRGCGHRSEM 96
Query: 172 NHG 164
N G
Sbjct: 97 NRG 99
>UniRef50_A6SKL1 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 713
Score = 31.1 bits (67), Expect = 9.7
Identities = 22/51 (43%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Frame = -3
Query: 277 PIVASRTSEHAC----LLTP*VTP*PSSHIERVRQLRVLNHGQTWSVSFED 137
P V SR + H P P PS HI+ RQ R L H QT S SF+D
Sbjct: 273 PRVVSRIATHNTPGFLFAQPARRPGPSPHIQSARQPRTLRH-QTNSFSFDD 322
>UniRef50_Q8NFC6 Cluster: Protein FAM44A; n=9; Eutheria|Rep: Protein
FAM44A - Homo sapiens (Human)
Length = 3051
Score = 31.1 bits (67), Expect = 9.7
Identities = 25/95 (26%), Positives = 42/95 (44%)
Frame = +1
Query: 49 EKATKQLKYPLAARVSQYKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELL 228
E +TK L+ P AAR+ + R + L K K R++ QYE+ + E L
Sbjct: 543 ESSTKSLE-PKAARIKEVLKERKVLEKKVALSKKRKKDSRNVEENSKKKQQYEEDSKETL 601
Query: 229 KVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQ 333
K S+ K + H+ AK + + + L++
Sbjct: 602 KTSEHCEKEKISSSKELKHVHAKSEPSKPARRLSE 636
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 359,388,665
Number of Sequences: 1657284
Number of extensions: 6290802
Number of successful extensions: 15451
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 15203
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15441
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 19810951153
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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