Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1001
         (423 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U20543-1|AAA63151.1|  115|Drosophila melanogaster minute(1)1B pr...   134   3e-32
BT029917-1|ABM92791.1|  115|Drosophila melanogaster GH03995p pro...   134   3e-32
AY070831-1|AAL48453.1|  115|Drosophila melanogaster AT29875p pro...   134   3e-32
AL031581-5|CAA20892.1|  115|Drosophila melanogaster EG:115C2.7,F...   134   3e-32
AE014298-77|AAN09021.1|  115|Drosophila melanogaster CG7622-PD, ...   134   3e-32
AE014298-76|AAN09020.1|  115|Drosophila melanogaster CG7622-PC, ...   134   3e-32
AE014298-75|AAF45531.1|  115|Drosophila melanogaster CG7622-PB, ...   134   3e-32
AE014298-74|AAN09019.1|  115|Drosophila melanogaster CG7622-PA, ...   134   3e-32
AY051912-1|AAK93336.1|  801|Drosophila melanogaster LD39933p pro...    28   4.5  
AE014134-2350|AAF53302.2|  800|Drosophila melanogaster CG7110-PB...    28   4.5  
AE014296-2200|AAN11862.1|  518|Drosophila melanogaster CG32108-P...    27   7.8  

>U20543-1|AAA63151.1|  115|Drosophila melanogaster minute(1)1B
           protein protein.
          Length = 115

 Score =  134 bits (325), Expect = 3e-32
 Identities = 63/76 (82%), Positives = 71/76 (93%)
 Frame = +1

Query: 115 IRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRA 294
           +R +RLK +QT+H+KF+RDLVREVVGHA YEKR MELLKVSKDKRALKFLKRRLGTHIRA
Sbjct: 34  LRGSRLKNIQTRHTKFMRDLVREVVGHAPYEKRTMELLKVSKDKRALKFLKRRLGTHIRA 93

Query: 295 KRKREELSNVLAQMRK 342
           KRKREELSN+L Q+RK
Sbjct: 94  KRKREELSNILTQLRK 109



 Score = 35.5 bits (78), Expect = 0.029
 Identities = 14/20 (70%), Positives = 18/20 (90%)
 Frame = +3

Query: 15 MAPRFEIAVGLRKGHKTTKI 74
          MA R+E+A+GL KGHKT+KI
Sbjct: 1  MAVRYELAIGLNKGHKTSKI 20


>BT029917-1|ABM92791.1|  115|Drosophila melanogaster GH03995p
           protein.
          Length = 115

 Score =  134 bits (325), Expect = 3e-32
 Identities = 63/76 (82%), Positives = 71/76 (93%)
 Frame = +1

Query: 115 IRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRA 294
           +R +RLK +QT+H+KF+RDLVREVVGHA YEKR MELLKVSKDKRALKFLKRRLGTHIRA
Sbjct: 34  LRGSRLKNIQTRHTKFMRDLVREVVGHAPYEKRTMELLKVSKDKRALKFLKRRLGTHIRA 93

Query: 295 KRKREELSNVLAQMRK 342
           KRKREELSN+L Q+RK
Sbjct: 94  KRKREELSNILTQLRK 109



 Score = 35.5 bits (78), Expect = 0.029
 Identities = 14/20 (70%), Positives = 18/20 (90%)
 Frame = +3

Query: 15 MAPRFEIAVGLRKGHKTTKI 74
          MA R+E+A+GL KGHKT+KI
Sbjct: 1  MAVRYELAIGLNKGHKTSKI 20


>AY070831-1|AAL48453.1|  115|Drosophila melanogaster AT29875p
           protein.
          Length = 115

 Score =  134 bits (325), Expect = 3e-32
 Identities = 63/76 (82%), Positives = 71/76 (93%)
 Frame = +1

Query: 115 IRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRA 294
           +R +RLK +QT+H+KF+RDLVREVVGHA YEKR MELLKVSKDKRALKFLKRRLGTHIRA
Sbjct: 34  LRGSRLKNIQTRHTKFMRDLVREVVGHAPYEKRTMELLKVSKDKRALKFLKRRLGTHIRA 93

Query: 295 KRKREELSNVLAQMRK 342
           KRKREELSN+L Q+RK
Sbjct: 94  KRKREELSNILTQLRK 109



 Score = 35.5 bits (78), Expect = 0.029
 Identities = 14/20 (70%), Positives = 18/20 (90%)
 Frame = +3

Query: 15 MAPRFEIAVGLRKGHKTTKI 74
          MA R+E+A+GL KGHKT+KI
Sbjct: 1  MAVRYELAIGLNKGHKTSKI 20


>AL031581-5|CAA20892.1|  115|Drosophila melanogaster
           EG:115C2.7,FBgn0002579;RpL36 protein.
          Length = 115

 Score =  134 bits (325), Expect = 3e-32
 Identities = 63/76 (82%), Positives = 71/76 (93%)
 Frame = +1

Query: 115 IRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRA 294
           +R +RLK +QT+H+KF+RDLVREVVGHA YEKR MELLKVSKDKRALKFLKRRLGTHIRA
Sbjct: 34  LRGSRLKNIQTRHTKFMRDLVREVVGHAPYEKRTMELLKVSKDKRALKFLKRRLGTHIRA 93

Query: 295 KRKREELSNVLAQMRK 342
           KRKREELSN+L Q+RK
Sbjct: 94  KRKREELSNILTQLRK 109



 Score = 35.5 bits (78), Expect = 0.029
 Identities = 14/20 (70%), Positives = 18/20 (90%)
 Frame = +3

Query: 15 MAPRFEIAVGLRKGHKTTKI 74
          MA R+E+A+GL KGHKT+KI
Sbjct: 1  MAVRYELAIGLNKGHKTSKI 20


>AE014298-77|AAN09021.1|  115|Drosophila melanogaster CG7622-PD,
           isoform D protein.
          Length = 115

 Score =  134 bits (325), Expect = 3e-32
 Identities = 63/76 (82%), Positives = 71/76 (93%)
 Frame = +1

Query: 115 IRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRA 294
           +R +RLK +QT+H+KF+RDLVREVVGHA YEKR MELLKVSKDKRALKFLKRRLGTHIRA
Sbjct: 34  LRGSRLKNIQTRHTKFMRDLVREVVGHAPYEKRTMELLKVSKDKRALKFLKRRLGTHIRA 93

Query: 295 KRKREELSNVLAQMRK 342
           KRKREELSN+L Q+RK
Sbjct: 94  KRKREELSNILTQLRK 109



 Score = 35.5 bits (78), Expect = 0.029
 Identities = 14/20 (70%), Positives = 18/20 (90%)
 Frame = +3

Query: 15 MAPRFEIAVGLRKGHKTTKI 74
          MA R+E+A+GL KGHKT+KI
Sbjct: 1  MAVRYELAIGLNKGHKTSKI 20


>AE014298-76|AAN09020.1|  115|Drosophila melanogaster CG7622-PC,
           isoform C protein.
          Length = 115

 Score =  134 bits (325), Expect = 3e-32
 Identities = 63/76 (82%), Positives = 71/76 (93%)
 Frame = +1

Query: 115 IRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRA 294
           +R +RLK +QT+H+KF+RDLVREVVGHA YEKR MELLKVSKDKRALKFLKRRLGTHIRA
Sbjct: 34  LRGSRLKNIQTRHTKFMRDLVREVVGHAPYEKRTMELLKVSKDKRALKFLKRRLGTHIRA 93

Query: 295 KRKREELSNVLAQMRK 342
           KRKREELSN+L Q+RK
Sbjct: 94  KRKREELSNILTQLRK 109



 Score = 35.5 bits (78), Expect = 0.029
 Identities = 14/20 (70%), Positives = 18/20 (90%)
 Frame = +3

Query: 15 MAPRFEIAVGLRKGHKTTKI 74
          MA R+E+A+GL KGHKT+KI
Sbjct: 1  MAVRYELAIGLNKGHKTSKI 20


>AE014298-75|AAF45531.1|  115|Drosophila melanogaster CG7622-PB,
           isoform B protein.
          Length = 115

 Score =  134 bits (325), Expect = 3e-32
 Identities = 63/76 (82%), Positives = 71/76 (93%)
 Frame = +1

Query: 115 IRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRA 294
           +R +RLK +QT+H+KF+RDLVREVVGHA YEKR MELLKVSKDKRALKFLKRRLGTHIRA
Sbjct: 34  LRGSRLKNIQTRHTKFMRDLVREVVGHAPYEKRTMELLKVSKDKRALKFLKRRLGTHIRA 93

Query: 295 KRKREELSNVLAQMRK 342
           KRKREELSN+L Q+RK
Sbjct: 94  KRKREELSNILTQLRK 109



 Score = 35.5 bits (78), Expect = 0.029
 Identities = 14/20 (70%), Positives = 18/20 (90%)
 Frame = +3

Query: 15 MAPRFEIAVGLRKGHKTTKI 74
          MA R+E+A+GL KGHKT+KI
Sbjct: 1  MAVRYELAIGLNKGHKTSKI 20


>AE014298-74|AAN09019.1|  115|Drosophila melanogaster CG7622-PA,
           isoform A protein.
          Length = 115

 Score =  134 bits (325), Expect = 3e-32
 Identities = 63/76 (82%), Positives = 71/76 (93%)
 Frame = +1

Query: 115 IRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRA 294
           +R +RLK +QT+H+KF+RDLVREVVGHA YEKR MELLKVSKDKRALKFLKRRLGTHIRA
Sbjct: 34  LRGSRLKNIQTRHTKFMRDLVREVVGHAPYEKRTMELLKVSKDKRALKFLKRRLGTHIRA 93

Query: 295 KRKREELSNVLAQMRK 342
           KRKREELSN+L Q+RK
Sbjct: 94  KRKREELSNILTQLRK 109



 Score = 35.5 bits (78), Expect = 0.029
 Identities = 14/20 (70%), Positives = 18/20 (90%)
 Frame = +3

Query: 15 MAPRFEIAVGLRKGHKTTKI 74
          MA R+E+A+GL KGHKT+KI
Sbjct: 1  MAVRYELAIGLNKGHKTSKI 20


>AY051912-1|AAK93336.1|  801|Drosophila melanogaster LD39933p
           protein.
          Length = 801

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
 Frame = +1

Query: 118 RPARLKGLQTKHSK-FVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRA 294
           R  R   L+T   K + RDL++++      ++R++ELL+  K++R  + L RRL   ++ 
Sbjct: 281 RNLRSAELETARKKDYQRDLMQQI----DEKRRSIELLR-EKERRQEEALTRRLEAQLKT 335

Query: 295 KRKREELSNVLAQMRK 342
            +  E+L     +  K
Sbjct: 336 IQLEEQLEKERVRAEK 351


>AE014134-2350|AAF53302.2|  800|Drosophila melanogaster CG7110-PB
           protein.
          Length = 800

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
 Frame = +1

Query: 118 RPARLKGLQTKHSK-FVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRA 294
           R  R   L+T   K + RDL++++      ++R++ELL+  K++R  + L RRL   ++ 
Sbjct: 281 RNLRSAELETARKKDYQRDLMQQI----DEKRRSIELLR-EKERRQEEALTRRLEAQLKT 335

Query: 295 KRKREELSNVLAQMRK 342
            +  E+L     +  K
Sbjct: 336 IQLEEQLEKERVRAEK 351


>AE014296-2200|AAN11862.1|  518|Drosophila melanogaster CG32108-PA
           protein.
          Length = 518

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 13/47 (27%), Positives = 24/47 (51%)
 Frame = -2

Query: 218 IALFSY*ACPTTSRTKSRTNLECFV*RPFSLAGLILMALYCDTLAAS 78
           + L+S   CP   R+  RT + C++ R   L  ++++ L   T+  S
Sbjct: 10  LGLYSPNWCPAIRRSLKRTPMACYLPRIHHLCAILMVKLKTKTIGNS 56


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,224,246
Number of Sequences: 53049
Number of extensions: 296125
Number of successful extensions: 802
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 790
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 802
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1292733852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)