BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brP-1000 (600 letters) Database: tribolium 336 sequences; 122,585 total letters Searching.......................................................done Score E Sequences producing significant alignments: (bits) Value AM292341-1|CAL23153.2| 393|Tribolium castaneum gustatory recept... 22 4.6 AJ005422-1|CAA06528.1| 287|Tribolium castaneum caudal protein p... 22 4.6 AJ005421-1|CAA06527.1| 249|Tribolium castaneum caudal protein p... 22 4.6 AY584475-1|AAS93634.1| 209|Tribolium castaneum homothorax protein. 21 6.0 AM292359-1|CAL23171.2| 436|Tribolium castaneum gustatory recept... 21 6.0 AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein. 21 6.0 AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembran... 21 6.0 AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembran... 21 6.0 >AM292341-1|CAL23153.2| 393|Tribolium castaneum gustatory receptor candidate 20 protein. Length = 393 Score = 21.8 bits (44), Expect = 4.6 Identities = 8/24 (33%), Positives = 13/24 (54%) Frame = -1 Query: 129 VLDTPDGHYFTKKFLITFHCTIHV 58 V++ +G Y LI F C +H+ Sbjct: 259 VIEAINGFYGVHTLLILFSCLLHL 282 >AJ005422-1|CAA06528.1| 287|Tribolium castaneum caudal protein protein. Length = 287 Score = 21.8 bits (44), Expect = 4.6 Identities = 9/18 (50%), Positives = 12/18 (66%) Frame = +3 Query: 489 TPGGSSTSVLVPGAGSGN 542 +P S + + PGAGSGN Sbjct: 88 SPTVSGSEMSSPGAGSGN 105 >AJ005421-1|CAA06527.1| 249|Tribolium castaneum caudal protein protein. Length = 249 Score = 21.8 bits (44), Expect = 4.6 Identities = 9/18 (50%), Positives = 12/18 (66%) Frame = +3 Query: 489 TPGGSSTSVLVPGAGSGN 542 +P S + + PGAGSGN Sbjct: 88 SPTVSGSEMSSPGAGSGN 105 >AY584475-1|AAS93634.1| 209|Tribolium castaneum homothorax protein. Length = 209 Score = 21.4 bits (43), Expect = 6.0 Identities = 8/20 (40%), Positives = 13/20 (65%) Frame = +3 Query: 480 FRGTPGGSSTSVLVPGAGSG 539 F G+PG +S + + G G+G Sbjct: 148 FLGSPGDASNASIGSGEGTG 167 >AM292359-1|CAL23171.2| 436|Tribolium castaneum gustatory receptor candidate 38 protein. Length = 436 Score = 21.4 bits (43), Expect = 6.0 Identities = 6/15 (40%), Positives = 12/15 (80%) Frame = -1 Query: 564 ISHVTLAHFQSLHQV 520 ++H+T+AHF+ + V Sbjct: 202 VTHITMAHFKIIQVV 216 >AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein. Length = 456 Score = 21.4 bits (43), Expect = 6.0 Identities = 8/20 (40%), Positives = 13/20 (65%) Frame = +3 Query: 480 FRGTPGGSSTSVLVPGAGSG 539 F G+PG +S + + G G+G Sbjct: 304 FLGSPGDASNASIGSGEGTG 323 >AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembrane transporter protein. Length = 669 Score = 21.4 bits (43), Expect = 6.0 Identities = 11/28 (39%), Positives = 15/28 (53%) Frame = -1 Query: 507 LKILQGYPGSILAADSDTLEVRQDDLVI 424 L+ + G P S S + V+QDDL I Sbjct: 137 LRCVNGIPVSSKTLASQSAYVQQDDLFI 164 >AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembrane transporter white protein. Length = 669 Score = 21.4 bits (43), Expect = 6.0 Identities = 11/28 (39%), Positives = 15/28 (53%) Frame = -1 Query: 507 LKILQGYPGSILAADSDTLEVRQDDLVI 424 L+ + G P S S + V+QDDL I Sbjct: 137 LRCVNGIPVSSKTLASQSAYVQQDDLFI 164 Database: tribolium Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 122,585 Number of sequences in database: 336 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 122,816 Number of Sequences: 336 Number of extensions: 2436 Number of successful extensions: 10 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 10 length of database: 122,585 effective HSP length: 54 effective length of database: 104,441 effective search space used: 15143945 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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