Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1000
         (600 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ404478-1|CAC16182.1|   77|Anopheles gambiae putative GATA fact...    24   3.3  
AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22...    21   3.5  
EF034031-1|ABK32002.1|   70|Anopheles gambiae serpin 4A protein.       23   7.5  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    23   10.0 

>AJ404478-1|CAC16182.1|   77|Anopheles gambiae putative GATA factor
           protein.
          Length = 77

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 11/23 (47%), Positives = 12/23 (52%), Gaps = 1/23 (4%)
 Frame = -3

Query: 583 REXXXGHLPCNACA-FPEPAPGT 518
           R    GH  CNACA +    PGT
Sbjct: 10  RRDIVGHTLCNACALYTRQNPGT 32


>AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22D
           protein.
          Length = 1322

 Score = 21.0 bits (42), Expect(2) = 3.5
 Identities = 12/30 (40%), Positives = 12/30 (40%)
 Frame = -2

Query: 218 GASAPTALVGLSLPPSSKNESVMISGDLEP 129
           GAS P  L    LPP    E V      EP
Sbjct: 629 GASEPVPLASWPLPPPYITEPVEGPAKKEP 658



 Score = 21.0 bits (42), Expect(2) = 3.5
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -2

Query: 143 GDLEPSWTPLM 111
           GD  PSW PL+
Sbjct: 692 GDNRPSWRPLI 702


>EF034031-1|ABK32002.1|   70|Anopheles gambiae serpin 4A protein.
          Length = 70

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 483 RGTPGGSSTSVLVPGAGSG 539
           +GT GG+ T+ L+   GSG
Sbjct: 21  QGTEGGAVTAALIDRIGSG 39


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1978

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 12/38 (31%), Positives = 15/38 (39%)
 Frame = +3

Query: 477  YFRGTPGGSSTSVLVPGAGSGNAQALHGRCPXXXSRPL 590
            Y   T GG+   +   G G G    LHG       RP+
Sbjct: 932  YHSSTVGGNKDVLDGGGGGGGGGGFLHGSNRTVIGRPV 969


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 568,770
Number of Sequences: 2352
Number of extensions: 10754
Number of successful extensions: 26
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58029966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)