BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brP-0998 (576 letters) Database: tribolium 336 sequences; 122,585 total letters Searching.......................................................done Score E Sequences producing significant alignments: (bits) Value AM292355-1|CAL23167.1| 324|Tribolium castaneum gustatory recept... 26 0.26 AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription fa... 25 0.35 AM292378-1|CAL23190.2| 387|Tribolium castaneum gustatory recept... 23 2.5 AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 21 5.7 AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 21 7.5 AM292374-1|CAL23186.2| 659|Tribolium castaneum gustatory recept... 21 9.9 AM292345-1|CAL23157.2| 384|Tribolium castaneum gustatory recept... 21 9.9 >AM292355-1|CAL23167.1| 324|Tribolium castaneum gustatory receptor candidate 34 protein. Length = 324 Score = 25.8 bits (54), Expect = 0.26 Identities = 10/27 (37%), Positives = 16/27 (59%) Frame = +2 Query: 425 YNDIFNRSSIIFQSIKLIHLINFIQYL 505 +NDIF S ++ S +H +N+I L Sbjct: 196 FNDIFGISFLLIISYSTLHFVNYIDDL 222 >AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription factor protein. Length = 441 Score = 25.4 bits (53), Expect = 0.35 Identities = 11/23 (47%), Positives = 13/23 (56%) Frame = -2 Query: 326 QSTYYILNPETYMTNVAAPIYYN 258 QS I P T +TN+ P YYN Sbjct: 344 QSPNQIYQPVTNLTNLTYPSYYN 366 >AM292378-1|CAL23190.2| 387|Tribolium castaneum gustatory receptor candidate 57 protein. Length = 387 Score = 22.6 bits (46), Expect = 2.5 Identities = 8/25 (32%), Positives = 15/25 (60%) Frame = +3 Query: 387 VFNYSVTRTFSYNIMTYLIVLVLYS 461 +F Y + R+F+Y + I L+ +S Sbjct: 143 MFQYYIGRSFTYYVCNTTIFLIFHS 167 >AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger protein protein. Length = 456 Score = 21.4 bits (43), Expect = 5.7 Identities = 8/11 (72%), Positives = 9/11 (81%) Frame = +2 Query: 125 SRVHHHVSSLL 157 S VHHH +SLL Sbjct: 132 SHVHHHQTSLL 142 >AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor candidate 46 protein. Length = 1451 Score = 21.0 bits (42), Expect = 7.5 Identities = 6/12 (50%), Positives = 10/12 (83%) Frame = +2 Query: 131 VHHHVSSLLLIF 166 +HHH+S L+ +F Sbjct: 857 LHHHLSKLIRLF 868 Score = 20.6 bits (41), Expect = 9.9 Identities = 8/37 (21%), Positives = 19/37 (51%) Frame = +2 Query: 422 QYNDIFNRSSIIFQSIKLIHLINFIQYLCVYLI*EQV 532 ++N+IF ++ + + + I +CV + EQ+ Sbjct: 591 RFNEIFGLGLLLMFGVSFLLITQTIFIICVIVQSEQI 627 >AM292374-1|CAL23186.2| 659|Tribolium castaneum gustatory receptor candidate 53 protein. Length = 659 Score = 20.6 bits (41), Expect = 9.9 Identities = 6/12 (50%), Positives = 10/12 (83%) Frame = +2 Query: 131 VHHHVSSLLLIF 166 +HHH+S L+ +F Sbjct: 508 LHHHLSKLVKLF 519 >AM292345-1|CAL23157.2| 384|Tribolium castaneum gustatory receptor candidate 24 protein. Length = 384 Score = 20.6 bits (41), Expect = 9.9 Identities = 6/12 (50%), Positives = 10/12 (83%) Frame = +2 Query: 131 VHHHVSSLLLIF 166 +HHH+S L+ +F Sbjct: 233 LHHHLSKLVKLF 244 Database: tribolium Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 122,585 Number of sequences in database: 336 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 106,473 Number of Sequences: 336 Number of extensions: 1804 Number of successful extensions: 8 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 7 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 8 length of database: 122,585 effective HSP length: 54 effective length of database: 104,441 effective search space used: 14308417 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -