Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0998
         (576 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ902587-1|ABI94369.1| 2009|Drosophila melanogaster calmodulin-b...    29   6.0  
AE013599-866|AAF58936.1|  397|Drosophila melanogaster CG13952-PA...    29   6.0  
BT003249-1|AAO25006.1|  814|Drosophila melanogaster LD30628p pro...    28   7.9  
BT001510-1|AAN71265.1|  718|Drosophila melanogaster LD41424p pro...    28   7.9  
AY166755-1|AAN85717.1|  718|Drosophila melanogaster loechrig iso...    28   7.9  
AY166754-1|AAN85716.1|  814|Drosophila melanogaster loechrig iso...    28   7.9  
AE014297-2954|ABI31187.1|  718|Drosophila melanogaster CG17299-P...    28   7.9  
AE014297-2953|AAN13854.1|  814|Drosophila melanogaster CG17299-P...    28   7.9  

>DQ902587-1|ABI94369.1| 2009|Drosophila melanogaster
           calmodulin-binding transcriptionactivator protein.
          Length = 2009

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 10/38 (26%), Positives = 23/38 (60%)
 Frame = +1

Query: 34  RRTLPTSERGSGGDAAETQLRVSLVLNNNNKPSAPSRL 147
           R+T+     G+G  ++ +   +S+V N+NNK ++ + +
Sbjct: 158 RKTIVQGSSGAGSSSSSSSSTISIVANSNNKEASSNTI 195


>AE013599-866|AAF58936.1|  397|Drosophila melanogaster CG13952-PA
           protein.
          Length = 397

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 10/38 (26%), Positives = 23/38 (60%)
 Frame = +1

Query: 34  RRTLPTSERGSGGDAAETQLRVSLVLNNNNKPSAPSRL 147
           R+T+     G+G  ++ +   +S+V N+NNK ++ + +
Sbjct: 128 RKTIVQGSSGAGSSSSSSSSTISIVANSNNKEASSNTI 165


>BT003249-1|AAO25006.1|  814|Drosophila melanogaster LD30628p
           protein.
          Length = 814

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 23/68 (33%), Positives = 31/68 (45%)
 Frame = +2

Query: 23  SPARGAPCRLANEALAETRRRLSSACHSCSTITTSRVHHHVSSLLLIFYVSVRSVQVMRT 202
           SP+  A      + L   RRR+SSA HS S   TSR H  V   +L+   S  SV+ +  
Sbjct: 241 SPSAAAAAAAVQQTLVYERRRVSSA-HS-SPSPTSRHHSPVHQCMLMRRRSDYSVEQIEQ 298

Query: 203 TNNTSMIL 226
                 +L
Sbjct: 299 WKRQQQLL 306


>BT001510-1|AAN71265.1|  718|Drosophila melanogaster LD41424p
           protein.
          Length = 718

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 23/68 (33%), Positives = 31/68 (45%)
 Frame = +2

Query: 23  SPARGAPCRLANEALAETRRRLSSACHSCSTITTSRVHHHVSSLLLIFYVSVRSVQVMRT 202
           SP+  A      + L   RRR+SSA HS S   TSR H  V   +L+   S  SV+ +  
Sbjct: 145 SPSAAAAAAAVQQTLVYERRRVSSA-HS-SPSPTSRHHSPVHQCMLMRRRSDYSVEQIEQ 202

Query: 203 TNNTSMIL 226
                 +L
Sbjct: 203 WKRQQQLL 210


>AY166755-1|AAN85717.1|  718|Drosophila melanogaster loechrig
           isoform IV protein.
          Length = 718

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 23/68 (33%), Positives = 31/68 (45%)
 Frame = +2

Query: 23  SPARGAPCRLANEALAETRRRLSSACHSCSTITTSRVHHHVSSLLLIFYVSVRSVQVMRT 202
           SP+  A      + L   RRR+SSA HS S   TSR H  V   +L+   S  SV+ +  
Sbjct: 145 SPSAAAAAAAVQQTLVYERRRVSSA-HS-SPSPTSRHHSPVHQCMLMRRRSDYSVEQIEQ 202

Query: 203 TNNTSMIL 226
                 +L
Sbjct: 203 WKRQQQLL 210


>AY166754-1|AAN85716.1|  814|Drosophila melanogaster loechrig
           isoform III protein.
          Length = 814

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 23/68 (33%), Positives = 31/68 (45%)
 Frame = +2

Query: 23  SPARGAPCRLANEALAETRRRLSSACHSCSTITTSRVHHHVSSLLLIFYVSVRSVQVMRT 202
           SP+  A      + L   RRR+SSA HS S   TSR H  V   +L+   S  SV+ +  
Sbjct: 241 SPSAAAAAAAVQQTLVYERRRVSSA-HS-SPSPTSRHHSPVHQCMLMRRRSDYSVEQIEQ 298

Query: 203 TNNTSMIL 226
                 +L
Sbjct: 299 WKRQQQLL 306


>AE014297-2954|ABI31187.1|  718|Drosophila melanogaster CG17299-PL,
           isoform L protein.
          Length = 718

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 23/68 (33%), Positives = 31/68 (45%)
 Frame = +2

Query: 23  SPARGAPCRLANEALAETRRRLSSACHSCSTITTSRVHHHVSSLLLIFYVSVRSVQVMRT 202
           SP+  A      + L   RRR+SSA HS S   TSR H  V   +L+   S  SV+ +  
Sbjct: 145 SPSAAAAAAAVQQTLVYERRRVSSA-HS-SPSPTSRHHSPVHQCMLMRRRSDYSVEQIEQ 202

Query: 203 TNNTSMIL 226
                 +L
Sbjct: 203 WKRQQQLL 210


>AE014297-2953|AAN13854.1|  814|Drosophila melanogaster CG17299-PG,
           isoform G protein.
          Length = 814

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 23/68 (33%), Positives = 31/68 (45%)
 Frame = +2

Query: 23  SPARGAPCRLANEALAETRRRLSSACHSCSTITTSRVHHHVSSLLLIFYVSVRSVQVMRT 202
           SP+  A      + L   RRR+SSA HS S   TSR H  V   +L+   S  SV+ +  
Sbjct: 241 SPSAAAAAAAVQQTLVYERRRVSSA-HS-SPSPTSRHHSPVHQCMLMRRRSDYSVEQIEQ 298

Query: 203 TNNTSMIL 226
                 +L
Sbjct: 299 WKRQQQLL 306


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,357,324
Number of Sequences: 53049
Number of extensions: 328713
Number of successful extensions: 715
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 691
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 715
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2276053890
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)