Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0998
         (576 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g77280.1 68414.m09000 protein kinase family protein contains ...    28   5.1  
At3g05820.1 68416.m00653 beta-fructofuranosidase, putative / inv...    27   6.8  

>At1g77280.1 68414.m09000 protein kinase family protein contains
           Pfam domain, PF00069: Protein kinase domain
          Length = 794

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 14/65 (21%), Positives = 27/65 (41%)
 Frame = +2

Query: 83  RLSSACHSCSTITTSRVHHHVSSLLLIFYVSVRSVQVMRTTNNTSMILISFKSYNLLFNY 262
           R+   C S   +   ++      +L  F   +  +  +   N  S++   F+ +NLL  Y
Sbjct: 458 RVFRGCLSNGRVVAVKILKQTEDVLNDFVAEIEIITTLHHKNIISLLGFCFEDHNLLLVY 517

Query: 263 NILEQ 277
           N L +
Sbjct: 518 NYLSR 522


>At3g05820.1 68416.m00653 beta-fructofuranosidase, putative /
           invertase, putative / saccharase, putative /
           beta-fructosidase, putative similar to neutral invertase
           [Daucus carota] GI:4200165; contains Pfam profile
           PF04853: Plant neutral invertase
          Length = 633

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 15/49 (30%), Positives = 24/49 (48%)
 Frame = +2

Query: 104 SCSTITTSRVHHHVSSLLLIFYVSVRSVQVMRTTNNTSMILISFKSYNL 250
           SC       +H H   +  +FY ++RS + M T N++S  +I   S  L
Sbjct: 325 SCMIDRRMGIHGHPLEIQALFYSALRSSREMITVNDSSKNIIKTISNRL 373


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,146,403
Number of Sequences: 28952
Number of extensions: 149086
Number of successful extensions: 316
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 311
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 316
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1121903184
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)