Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0997
         (550 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    26   0.25 
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    23   1.8  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    23   1.8  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    23   2.3  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   5.4  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    21   5.4  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    21   5.4  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    21   5.4  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   5.4  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    21   5.4  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    21   5.4  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    21   5.4  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           21   5.4  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    21   5.4  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    21   7.1  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 25.8 bits (54), Expect = 0.25
 Identities = 11/23 (47%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
 Frame = +3

Query: 264  RLYVFEDTPCAAYY-CQEQEKKL 329
            RL+V +DT CA YY C + + +L
Sbjct: 2240 RLFVADDTNCAQYYLCNQGQLQL 2262



 Score = 22.2 bits (45), Expect = 3.1
 Identities = 7/26 (26%), Positives = 12/26 (46%)
 Frame = +3

Query: 402  EHVSPGWKAKPGIGYQEIPFNHVWSS 479
            EH+ P W  KP   +     +  W++
Sbjct: 1029 EHMHPDWTTKPSTWWSSTTTSPWWTT 1054



 Score = 20.6 bits (41), Expect = 9.4
 Identities = 11/27 (40%), Positives = 12/27 (44%)
 Frame = +2

Query: 305 LSGTREKTRRSVARTTENFIVPRRRLP 385
           L GTR    RS      + I   RRLP
Sbjct: 55  LYGTRALPLRSAVEHIPDLIADSRRLP 81


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 10/28 (35%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = -3

Query: 317 LFLTIVS-RTRRVFEHVQSNAIFGTGFV 237
           +FL I   +T  VFEHV+  +++   F+
Sbjct: 321 IFLNITGDKTNSVFEHVKLGSLYHISFM 348


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -1

Query: 127 LSLSSCVKIGVLMVSCPRPTIFFH 56
           LS     KIG+L+     P  FFH
Sbjct: 78  LSFYKAFKIGILLNQLITPLFFFH 101


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -3

Query: 122 VVELCEDWGVDGF 84
           VVE  + WG DGF
Sbjct: 125 VVEFVKTWGFDGF 137


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = +3

Query: 351 PKTLLFQDGGSHLCLNLEHVSPGWKAKPGI 440
           P  ++ Q+       +LE + PG ++ PGI
Sbjct: 107 PVKIMLQNATDLFIKSLESLKPGNQSTPGI 136


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 57  WKKIVGLGQETIN 95
           W K V LGQ T+N
Sbjct: 203 WMKRVHLGQSTVN 215


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 57  WKKIVGLGQETIN 95
           W K V LGQ T+N
Sbjct: 203 WMKRVHLGQSTVN 215


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 57  WKKIVGLGQETIN 95
           W K V LGQ T+N
Sbjct: 203 WMKRVHLGQSTVN 215


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -1

Query: 148 MSVTRNILSLSSCVKIGVLMVSCPRPT 68
           +S  ++IL+   C K G+  +   RPT
Sbjct: 230 LSKVKSILNKKCCEKCGLKKIEFCRPT 256


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 57  WKKIVGLGQETIN 95
           W K V LGQ T+N
Sbjct: 203 WMKRVHLGQSTVN 215


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 57  WKKIVGLGQETIN 95
           W K V LGQ T+N
Sbjct: 203 WMKRVHLGQSTVN 215


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 57  WKKIVGLGQETIN 95
           W K V LGQ T+N
Sbjct: 159 WMKRVHLGQSTVN 171


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 57  WKKIVGLGQETIN 95
           W K V LGQ T+N
Sbjct: 203 WMKRVHLGQSTVN 215


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 57  WKKIVGLGQETIN 95
           W K V LGQ T+N
Sbjct: 203 WMKRVHLGQSTVN 215


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = -1

Query: 196 TALPLKLSPTNTNV 155
           T +P+K+SP+  N+
Sbjct: 436 TVIPIKISPSTANM 449


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,547
Number of Sequences: 336
Number of extensions: 3149
Number of successful extensions: 17
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13516233
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)