Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0997
(550 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF247762-1|AAF74193.1| 1072|Drosophila melanogaster Netrin recep... 81 7e-16
AY058501-1|AAL13730.1| 1072|Drosophila melanogaster LD19406p pro... 81 1e-15
AE013599-2049|AAF58143.2| 1072|Drosophila melanogaster CG8166-PA... 81 1e-15
U41367-1|AAB04167.1| 1037|Drosophila melanogaster transcription ... 28 9.6
AY129443-1|AAM76185.1| 1037|Drosophila melanogaster LD17962p pro... 28 9.6
AY069803-1|AAL39948.1| 856|Drosophila melanogaster SD04280p pro... 28 9.6
AE014298-3176|AAN09565.1| 856|Drosophila melanogaster CG14619-P... 28 9.6
AE014298-3175|AAN09564.1| 856|Drosophila melanogaster CG14619-P... 28 9.6
AE014298-3174|AAF50952.2| 856|Drosophila melanogaster CG14619-P... 28 9.6
AE014296-2382|AAF49741.1| 1037|Drosophila melanogaster CG3836-PA... 28 9.6
>AF247762-1|AAF74193.1| 1072|Drosophila melanogaster Netrin receptor
DUnc5 protein.
Length = 1072
Score = 81.4 bits (192), Expect = 7e-16
Identities = 49/156 (31%), Positives = 80/156 (51%), Gaps = 2/156 (1%)
Frame = +3
Query: 57 WKKIVGLGQETINTPIFTQLDNDKIFLVTDMLSTFVLVGE-SFNGKAVKALQLAIYAPTV 233
W++ V +G+ETINTP+F QL+ +F++T+ L F +V E ++K LA T
Sbjct: 762 WRRAVSVGEETINTPMFVQLEATHVFIMTEQLGHFTVVAEPRIQQPSIKMKLLAFSQHT- 820
Query: 234 LNETSSEYSIRLYVFEDTPCAAYYCQEQEKKLGGVLLERPKTLLFQDGGSHLCLNLEHVS 413
+++ S+R+YV +D P + C E KLGG L + F +L + +
Sbjct: 821 -PPSNANCSLRIYVVKDFPNSRDICANVEAKLGGSFLGESQVFAFTLNSRNLNIRVRSAD 879
Query: 414 PGWKAKPGIGYQE-IPFNHVWSSNYNALHCSFTLDR 518
+ Y+ IP+ H+ S+N + LHC F+L R
Sbjct: 880 ----VEAAASYEHAIPYQHILSNN-SILHCEFSLRR 910
>AY058501-1|AAL13730.1| 1072|Drosophila melanogaster LD19406p protein.
Length = 1072
Score = 80.6 bits (190), Expect = 1e-15
Identities = 49/156 (31%), Positives = 80/156 (51%), Gaps = 2/156 (1%)
Frame = +3
Query: 57 WKKIVGLGQETINTPIFTQLDNDKIFLVTDMLSTFVLVGE-SFNGKAVKALQLAIYAPTV 233
W++ V +G+ETINTP+F QL+ +F++T+ L F +V E ++K LA T
Sbjct: 762 WRRAVSVGEETINTPMFVQLEATHVFIMTEQLGHFTVVAEPRIQQPSIKMKLLAFSQHT- 820
Query: 234 LNETSSEYSIRLYVFEDTPCAAYYCQEQEKKLGGVLLERPKTLLFQDGGSHLCLNLEHVS 413
+++ S+R+YV +D P + C E KLGG L + F +L + +
Sbjct: 821 -PPSNANCSLRIYVVKDFPNSRDICANVEAKLGGSFLGESQVFAFTLNSRNLNIRVRSAD 879
Query: 414 PGWKAKPGIGYQE-IPFNHVWSSNYNALHCSFTLDR 518
+ Y+ IP+ H+ S+N + LHC F+L R
Sbjct: 880 ----VEAAAPYEHAIPYQHILSNN-SILHCEFSLRR 910
>AE013599-2049|AAF58143.2| 1072|Drosophila melanogaster CG8166-PA
protein.
Length = 1072
Score = 80.6 bits (190), Expect = 1e-15
Identities = 49/156 (31%), Positives = 80/156 (51%), Gaps = 2/156 (1%)
Frame = +3
Query: 57 WKKIVGLGQETINTPIFTQLDNDKIFLVTDMLSTFVLVGE-SFNGKAVKALQLAIYAPTV 233
W++ V +G+ETINTP+F QL+ +F++T+ L F +V E ++K LA T
Sbjct: 762 WRRAVSVGEETINTPMFVQLEATHVFIMTEQLGHFTVVAEPRIQQPSIKMKLLAFSQHT- 820
Query: 234 LNETSSEYSIRLYVFEDTPCAAYYCQEQEKKLGGVLLERPKTLLFQDGGSHLCLNLEHVS 413
+++ S+R+YV +D P + C E KLGG L + F +L + +
Sbjct: 821 -PPSNANCSLRIYVVKDFPNSRDICANVEAKLGGSFLGESQVFAFTLNSRNLNIRVRSAD 879
Query: 414 PGWKAKPGIGYQE-IPFNHVWSSNYNALHCSFTLDR 518
+ Y+ IP+ H+ S+N + LHC F+L R
Sbjct: 880 ----VEAAAPYEHAIPYQHILSNN-SILHCEFSLRR 910
>U41367-1|AAB04167.1| 1037|Drosophila melanogaster transcription
factor protein.
Length = 1037
Score = 27.9 bits (59), Expect = 9.6
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Frame = +2
Query: 320 EKTRRSVARTTENFIVPRRRLPSLFESGARQSR---LESEAGHRLSGDPIQSRVE 475
EK + F V + R P L G + S ES+A +SGDP+++ +E
Sbjct: 245 EKNNTDSTVSQPEFFVKQTRDPRLLIIGRKNSTSSFAESKASKSISGDPLETAME 299
>AY129443-1|AAM76185.1| 1037|Drosophila melanogaster LD17962p
protein.
Length = 1037
Score = 27.9 bits (59), Expect = 9.6
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Frame = +2
Query: 320 EKTRRSVARTTENFIVPRRRLPSLFESGARQSR---LESEAGHRLSGDPIQSRVE 475
EK + F V + R P L G + S ES+A +SGDP+++ +E
Sbjct: 245 EKNNTDSTVSQPEFFVKQTRDPRLLIIGRKNSTSSFAESKASKSISGDPLETAME 299
>AY069803-1|AAL39948.1| 856|Drosophila melanogaster SD04280p
protein.
Length = 856
Score = 27.9 bits (59), Expect = 9.6
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = -2
Query: 456 GSPDNRCPASLSSRD*RAPDSNKDGSLRLGTIKFSVVLAT--LRRVFSLVPDNSKPHKAC 283
GS + C +S +SRD +A D NK S + + ++AT L P N KP+
Sbjct: 209 GSVGHNCSSSTASRDTKAVDGNKRLSSSSSSPSLARLVATSGLDIYEKYSPANYKPNCEL 268
Query: 282 LRTRT 268
R+R+
Sbjct: 269 SRSRS 273
>AE014298-3176|AAN09565.1| 856|Drosophila melanogaster CG14619-PE,
isoform E protein.
Length = 856
Score = 27.9 bits (59), Expect = 9.6
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = -2
Query: 456 GSPDNRCPASLSSRD*RAPDSNKDGSLRLGTIKFSVVLAT--LRRVFSLVPDNSKPHKAC 283
GS + C +S +SRD +A D NK S + + ++AT L P N KP+
Sbjct: 209 GSVGHNCSSSTASRDTKAVDGNKRLSSSSSSPSLARLVATSGLDIYEKYSPANYKPNCEL 268
Query: 282 LRTRT 268
R+R+
Sbjct: 269 SRSRS 273
>AE014298-3175|AAN09564.1| 856|Drosophila melanogaster CG14619-PD,
isoform D protein.
Length = 856
Score = 27.9 bits (59), Expect = 9.6
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = -2
Query: 456 GSPDNRCPASLSSRD*RAPDSNKDGSLRLGTIKFSVVLAT--LRRVFSLVPDNSKPHKAC 283
GS + C +S +SRD +A D NK S + + ++AT L P N KP+
Sbjct: 209 GSVGHNCSSSTASRDTKAVDGNKRLSSSSSSPSLARLVATSGLDIYEKYSPANYKPNCEL 268
Query: 282 LRTRT 268
R+R+
Sbjct: 269 SRSRS 273
>AE014298-3174|AAF50952.2| 856|Drosophila melanogaster CG14619-PA,
isoform A protein.
Length = 856
Score = 27.9 bits (59), Expect = 9.6
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = -2
Query: 456 GSPDNRCPASLSSRD*RAPDSNKDGSLRLGTIKFSVVLAT--LRRVFSLVPDNSKPHKAC 283
GS + C +S +SRD +A D NK S + + ++AT L P N KP+
Sbjct: 209 GSVGHNCSSSTASRDTKAVDGNKRLSSSSSSPSLARLVATSGLDIYEKYSPANYKPNCEL 268
Query: 282 LRTRT 268
R+R+
Sbjct: 269 SRSRS 273
>AE014296-2382|AAF49741.1| 1037|Drosophila melanogaster CG3836-PA
protein.
Length = 1037
Score = 27.9 bits (59), Expect = 9.6
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Frame = +2
Query: 320 EKTRRSVARTTENFIVPRRRLPSLFESGARQSR---LESEAGHRLSGDPIQSRVE 475
EK + F V + R P L G + S ES+A +SGDP+++ +E
Sbjct: 245 EKNNTDSTVSQPEFFVKQTRDPRLLIIGRKNSTSSFAESKASKSISGDPLETAME 299
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,399,475
Number of Sequences: 53049
Number of extensions: 605831
Number of successful extensions: 1743
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1571
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1740
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2089831299
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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