BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brP-0997 (550 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AF247762-1|AAF74193.1| 1072|Drosophila melanogaster Netrin recep... 81 7e-16 AY058501-1|AAL13730.1| 1072|Drosophila melanogaster LD19406p pro... 81 1e-15 AE013599-2049|AAF58143.2| 1072|Drosophila melanogaster CG8166-PA... 81 1e-15 U41367-1|AAB04167.1| 1037|Drosophila melanogaster transcription ... 28 9.6 AY129443-1|AAM76185.1| 1037|Drosophila melanogaster LD17962p pro... 28 9.6 AY069803-1|AAL39948.1| 856|Drosophila melanogaster SD04280p pro... 28 9.6 AE014298-3176|AAN09565.1| 856|Drosophila melanogaster CG14619-P... 28 9.6 AE014298-3175|AAN09564.1| 856|Drosophila melanogaster CG14619-P... 28 9.6 AE014298-3174|AAF50952.2| 856|Drosophila melanogaster CG14619-P... 28 9.6 AE014296-2382|AAF49741.1| 1037|Drosophila melanogaster CG3836-PA... 28 9.6 >AF247762-1|AAF74193.1| 1072|Drosophila melanogaster Netrin receptor DUnc5 protein. Length = 1072 Score = 81.4 bits (192), Expect = 7e-16 Identities = 49/156 (31%), Positives = 80/156 (51%), Gaps = 2/156 (1%) Frame = +3 Query: 57 WKKIVGLGQETINTPIFTQLDNDKIFLVTDMLSTFVLVGE-SFNGKAVKALQLAIYAPTV 233 W++ V +G+ETINTP+F QL+ +F++T+ L F +V E ++K LA T Sbjct: 762 WRRAVSVGEETINTPMFVQLEATHVFIMTEQLGHFTVVAEPRIQQPSIKMKLLAFSQHT- 820 Query: 234 LNETSSEYSIRLYVFEDTPCAAYYCQEQEKKLGGVLLERPKTLLFQDGGSHLCLNLEHVS 413 +++ S+R+YV +D P + C E KLGG L + F +L + + Sbjct: 821 -PPSNANCSLRIYVVKDFPNSRDICANVEAKLGGSFLGESQVFAFTLNSRNLNIRVRSAD 879 Query: 414 PGWKAKPGIGYQE-IPFNHVWSSNYNALHCSFTLDR 518 + Y+ IP+ H+ S+N + LHC F+L R Sbjct: 880 ----VEAAASYEHAIPYQHILSNN-SILHCEFSLRR 910 >AY058501-1|AAL13730.1| 1072|Drosophila melanogaster LD19406p protein. Length = 1072 Score = 80.6 bits (190), Expect = 1e-15 Identities = 49/156 (31%), Positives = 80/156 (51%), Gaps = 2/156 (1%) Frame = +3 Query: 57 WKKIVGLGQETINTPIFTQLDNDKIFLVTDMLSTFVLVGE-SFNGKAVKALQLAIYAPTV 233 W++ V +G+ETINTP+F QL+ +F++T+ L F +V E ++K LA T Sbjct: 762 WRRAVSVGEETINTPMFVQLEATHVFIMTEQLGHFTVVAEPRIQQPSIKMKLLAFSQHT- 820 Query: 234 LNETSSEYSIRLYVFEDTPCAAYYCQEQEKKLGGVLLERPKTLLFQDGGSHLCLNLEHVS 413 +++ S+R+YV +D P + C E KLGG L + F +L + + Sbjct: 821 -PPSNANCSLRIYVVKDFPNSRDICANVEAKLGGSFLGESQVFAFTLNSRNLNIRVRSAD 879 Query: 414 PGWKAKPGIGYQE-IPFNHVWSSNYNALHCSFTLDR 518 + Y+ IP+ H+ S+N + LHC F+L R Sbjct: 880 ----VEAAAPYEHAIPYQHILSNN-SILHCEFSLRR 910 >AE013599-2049|AAF58143.2| 1072|Drosophila melanogaster CG8166-PA protein. Length = 1072 Score = 80.6 bits (190), Expect = 1e-15 Identities = 49/156 (31%), Positives = 80/156 (51%), Gaps = 2/156 (1%) Frame = +3 Query: 57 WKKIVGLGQETINTPIFTQLDNDKIFLVTDMLSTFVLVGE-SFNGKAVKALQLAIYAPTV 233 W++ V +G+ETINTP+F QL+ +F++T+ L F +V E ++K LA T Sbjct: 762 WRRAVSVGEETINTPMFVQLEATHVFIMTEQLGHFTVVAEPRIQQPSIKMKLLAFSQHT- 820 Query: 234 LNETSSEYSIRLYVFEDTPCAAYYCQEQEKKLGGVLLERPKTLLFQDGGSHLCLNLEHVS 413 +++ S+R+YV +D P + C E KLGG L + F +L + + Sbjct: 821 -PPSNANCSLRIYVVKDFPNSRDICANVEAKLGGSFLGESQVFAFTLNSRNLNIRVRSAD 879 Query: 414 PGWKAKPGIGYQE-IPFNHVWSSNYNALHCSFTLDR 518 + Y+ IP+ H+ S+N + LHC F+L R Sbjct: 880 ----VEAAAPYEHAIPYQHILSNN-SILHCEFSLRR 910 >U41367-1|AAB04167.1| 1037|Drosophila melanogaster transcription factor protein. Length = 1037 Score = 27.9 bits (59), Expect = 9.6 Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 3/55 (5%) Frame = +2 Query: 320 EKTRRSVARTTENFIVPRRRLPSLFESGARQSR---LESEAGHRLSGDPIQSRVE 475 EK + F V + R P L G + S ES+A +SGDP+++ +E Sbjct: 245 EKNNTDSTVSQPEFFVKQTRDPRLLIIGRKNSTSSFAESKASKSISGDPLETAME 299 >AY129443-1|AAM76185.1| 1037|Drosophila melanogaster LD17962p protein. Length = 1037 Score = 27.9 bits (59), Expect = 9.6 Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 3/55 (5%) Frame = +2 Query: 320 EKTRRSVARTTENFIVPRRRLPSLFESGARQSR---LESEAGHRLSGDPIQSRVE 475 EK + F V + R P L G + S ES+A +SGDP+++ +E Sbjct: 245 EKNNTDSTVSQPEFFVKQTRDPRLLIIGRKNSTSSFAESKASKSISGDPLETAME 299 >AY069803-1|AAL39948.1| 856|Drosophila melanogaster SD04280p protein. Length = 856 Score = 27.9 bits (59), Expect = 9.6 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 2/65 (3%) Frame = -2 Query: 456 GSPDNRCPASLSSRD*RAPDSNKDGSLRLGTIKFSVVLAT--LRRVFSLVPDNSKPHKAC 283 GS + C +S +SRD +A D NK S + + ++AT L P N KP+ Sbjct: 209 GSVGHNCSSSTASRDTKAVDGNKRLSSSSSSPSLARLVATSGLDIYEKYSPANYKPNCEL 268 Query: 282 LRTRT 268 R+R+ Sbjct: 269 SRSRS 273 >AE014298-3176|AAN09565.1| 856|Drosophila melanogaster CG14619-PE, isoform E protein. Length = 856 Score = 27.9 bits (59), Expect = 9.6 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 2/65 (3%) Frame = -2 Query: 456 GSPDNRCPASLSSRD*RAPDSNKDGSLRLGTIKFSVVLAT--LRRVFSLVPDNSKPHKAC 283 GS + C +S +SRD +A D NK S + + ++AT L P N KP+ Sbjct: 209 GSVGHNCSSSTASRDTKAVDGNKRLSSSSSSPSLARLVATSGLDIYEKYSPANYKPNCEL 268 Query: 282 LRTRT 268 R+R+ Sbjct: 269 SRSRS 273 >AE014298-3175|AAN09564.1| 856|Drosophila melanogaster CG14619-PD, isoform D protein. Length = 856 Score = 27.9 bits (59), Expect = 9.6 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 2/65 (3%) Frame = -2 Query: 456 GSPDNRCPASLSSRD*RAPDSNKDGSLRLGTIKFSVVLAT--LRRVFSLVPDNSKPHKAC 283 GS + C +S +SRD +A D NK S + + ++AT L P N KP+ Sbjct: 209 GSVGHNCSSSTASRDTKAVDGNKRLSSSSSSPSLARLVATSGLDIYEKYSPANYKPNCEL 268 Query: 282 LRTRT 268 R+R+ Sbjct: 269 SRSRS 273 >AE014298-3174|AAF50952.2| 856|Drosophila melanogaster CG14619-PA, isoform A protein. Length = 856 Score = 27.9 bits (59), Expect = 9.6 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 2/65 (3%) Frame = -2 Query: 456 GSPDNRCPASLSSRD*RAPDSNKDGSLRLGTIKFSVVLAT--LRRVFSLVPDNSKPHKAC 283 GS + C +S +SRD +A D NK S + + ++AT L P N KP+ Sbjct: 209 GSVGHNCSSSTASRDTKAVDGNKRLSSSSSSPSLARLVATSGLDIYEKYSPANYKPNCEL 268 Query: 282 LRTRT 268 R+R+ Sbjct: 269 SRSRS 273 >AE014296-2382|AAF49741.1| 1037|Drosophila melanogaster CG3836-PA protein. Length = 1037 Score = 27.9 bits (59), Expect = 9.6 Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 3/55 (5%) Frame = +2 Query: 320 EKTRRSVARTTENFIVPRRRLPSLFESGARQSR---LESEAGHRLSGDPIQSRVE 475 EK + F V + R P L G + S ES+A +SGDP+++ +E Sbjct: 245 EKNNTDSTVSQPEFFVKQTRDPRLLIIGRKNSTSSFAESKASKSISGDPLETAME 299 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 26,399,475 Number of Sequences: 53049 Number of extensions: 605831 Number of successful extensions: 1743 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 1571 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1740 length of database: 24,988,368 effective HSP length: 81 effective length of database: 20,691,399 effective search space used: 2089831299 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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