Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0993
(816 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P41042 Cluster: 40S ribosomal protein S4; n=38; Eukaryo... 440 e-122
UniRef50_P62701 Cluster: 40S ribosomal protein S4, X isoform; n=... 428 e-119
UniRef50_UPI000065EA48 Cluster: similar to 40S ribosomal protein... 230 e-112
UniRef50_P49204 Cluster: 40S ribosomal protein S4-2; n=55; Eukar... 382 e-105
UniRef50_UPI0000499069 Cluster: 40S ribosomal protein S4; n=2; E... 327 2e-88
UniRef50_UPI00005A08FF Cluster: PREDICTED: similar to 40S riboso... 235 3e-88
UniRef50_A2ECC6 Cluster: 40S ribosomal protein S4-C, putative; n... 291 1e-77
UniRef50_Q9XG32 Cluster: 40S ribosomal protein S4; n=1; Guillard... 288 1e-76
UniRef50_UPI0000D9EB72 Cluster: PREDICTED: similar to 40S riboso... 287 2e-76
UniRef50_UPI00006CBCC9 Cluster: Ribosomal family S4e containing ... 273 3e-72
UniRef50_Q7KJQ3 Cluster: 40S ribosomal protein S4; n=9; Eukaryot... 273 3e-72
UniRef50_Q8SRB9 Cluster: 40S RIBOSOMAL PROTEIN S4; n=1; Encephal... 182 7e-45
UniRef50_Q9YF85 Cluster: 30S ribosomal protein S4e; n=4; Desulfu... 143 5e-33
UniRef50_Q8TW18 Cluster: 30S ribosomal protein S4e; n=1; Methano... 130 4e-29
UniRef50_P62428 Cluster: 30S ribosomal protein S4e; n=12; Euryar... 130 5e-29
UniRef50_A5UL76 Cluster: Ribosomal protein S4e; n=2; Methanobact... 125 1e-27
UniRef50_A1RWS3 Cluster: Ribosomal protein S4E, central; n=1; Th... 120 4e-26
UniRef50_Q56230 Cluster: 30S ribosomal protein S4e; n=3; Thermop... 119 1e-25
UniRef50_A3H986 Cluster: Ribosomal protein S4E; n=1; Caldivirga ... 116 5e-25
UniRef50_A3CT09 Cluster: Ribosomal protein S4E, central; n=3; Me... 113 5e-24
UniRef50_Q8ZTD3 Cluster: 30S ribosomal protein S4e; n=4; Pyrobac... 113 5e-24
UniRef50_Q8PV38 Cluster: 30S ribosomal protein S4e; n=4; Euryarc... 112 1e-23
UniRef50_Q40941 Cluster: 40S ribosomal protein S4; n=2; Bigelowi... 110 4e-23
UniRef50_Q0W1X6 Cluster: 30S ribosomal protein S4E; n=2; Euryarc... 110 5e-23
UniRef50_UPI000038E22A Cluster: hypothetical protein Faci_030011... 104 3e-21
UniRef50_Q12ZT9 Cluster: Ribosomal protein S4E; n=1; Methanococc... 104 3e-21
UniRef50_Q673R6 Cluster: Ribosomal protein S4; n=2; environmenta... 103 5e-21
UniRef50_O05634 Cluster: 30S ribosomal protein S4e; n=5; Sulfolo... 103 7e-21
UniRef50_P62429 Cluster: 30S ribosomal protein S4e; n=1; Nanoarc... 98 2e-19
UniRef50_Q6L1B5 Cluster: 30S ribosomal protein S4e; n=1; Picroph... 96 1e-18
UniRef50_A2SPL4 Cluster: Ribosomal protein S4E, central; n=1; Me... 93 6e-18
UniRef50_Q00TF1 Cluster: Chromosome 17 contig 1, DNA sequence; n... 89 1e-16
UniRef50_P22510 Cluster: 30S ribosomal protein S4E; n=6; Halobac... 86 1e-15
UniRef50_A0RVY5 Cluster: Ribosomal protein S4E; n=2; Thermoprote... 83 1e-14
UniRef50_A5BV74 Cluster: Putative uncharacterized protein; n=1; ... 54 6e-06
UniRef50_A6PQ76 Cluster: Putative uncharacterized protein; n=1; ... 43 0.011
UniRef50_A0BHK0 Cluster: Chromosome undetermined scaffold_108, w... 40 0.057
UniRef50_A6WAT7 Cluster: Putative uncharacterized protein; n=1; ... 39 0.13
UniRef50_Q9KI91 Cluster: VrrB; n=17; Bacteria|Rep: VrrB - Bacill... 38 0.30
UniRef50_Q9KI83 Cluster: VrrB; n=9; Bacillus cereus group|Rep: V... 38 0.30
UniRef50_A0GGU8 Cluster: Putative uncharacterized protein; n=1; ... 38 0.30
UniRef50_UPI000038E364 Cluster: hypothetical protein Faci_030005... 38 0.40
UniRef50_Q2VZ09 Cluster: Predicted SAM-dependent methyltransfera... 38 0.40
UniRef50_Q1B492 Cluster: LigA; n=1; Mycobacterium sp. MCS|Rep: L... 37 0.53
UniRef50_Q8BY81 Cluster: 3 days neonate thymus cDNA, RIKEN full-... 37 0.70
UniRef50_Q17LX3 Cluster: Putative uncharacterized protein; n=1; ... 36 0.92
UniRef50_A5K5R6 Cluster: RAD protein; n=1; Plasmodium vivax|Rep:... 36 0.92
UniRef50_A0VC89 Cluster: Putative uncharacterized protein; n=1; ... 36 1.2
UniRef50_A7ATI1 Cluster: Putative uncharacterized protein; n=1; ... 36 1.2
UniRef50_UPI0000DB6DB9 Cluster: PREDICTED: hypothetical protein;... 36 1.6
UniRef50_Q7REV3 Cluster: Drosophila melanogaster CG8797 gene pro... 36 1.6
UniRef50_Q0UL67 Cluster: Predicted protein; n=1; Phaeosphaeria n... 36 1.6
UniRef50_UPI00006A1FE8 Cluster: Coiled-coil domain-containing pr... 35 2.1
UniRef50_UPI0000DB7528 Cluster: PREDICTED: similar to Homeobox p... 35 2.8
UniRef50_A7DCW8 Cluster: Dihydropteroate synthase; n=5; Alphapro... 35 2.8
UniRef50_A5WHY9 Cluster: TonB-dependent receptor; n=1; Psychroba... 35 2.8
UniRef50_A5NYF9 Cluster: 3-isopropylmalate dehydratase, small su... 35 2.8
UniRef50_A5BNN8 Cluster: Putative uncharacterized protein; n=1; ... 35 2.8
UniRef50_UPI00015B58DA Cluster: PREDICTED: hypothetical protein;... 34 3.7
UniRef50_UPI0000E814A8 Cluster: PREDICTED: similar to MEGF6; n=1... 34 3.7
UniRef50_UPI000023E82F Cluster: hypothetical protein FG01599.1; ... 34 3.7
UniRef50_A7CME0 Cluster: Putative uncharacterized protein precur... 34 3.7
UniRef50_A6GEF6 Cluster: Hydrolase, alpha/beta fold family prote... 34 4.9
UniRef50_Q93VS6 Cluster: At1g67870/T23K23_28; n=2; Arabidopsis t... 34 4.9
UniRef50_UPI00015B8DDD Cluster: UPI00015B8DDD related cluster; n... 33 6.5
UniRef50_Q6RVG3 Cluster: Na-driven Cl-HCO3 exchanger NDCBE1-A; n... 33 6.5
UniRef50_Q6RVG2 Cluster: Na-driven Cl-HCO3 exchanger NDCBE1-B; n... 33 6.5
UniRef50_Q3JXY9 Cluster: Putative uncharacterized protein; n=5; ... 33 6.5
UniRef50_A7DKA7 Cluster: Putative uncharacterized protein; n=1; ... 33 6.5
UniRef50_Q5QMN1 Cluster: Putative uncharacterized protein P0419B... 33 6.5
UniRef50_Q57ZF4 Cluster: Putative uncharacterized protein; n=1; ... 33 6.5
UniRef50_Q54XL5 Cluster: Putative uncharacterized protein; n=1; ... 33 6.5
UniRef50_A5KAS9 Cluster: Tryptophan-rich antigen; n=3; cellular ... 33 6.5
UniRef50_A7TPB7 Cluster: Putative uncharacterized protein; n=1; ... 33 6.5
UniRef50_UPI0000D5573E Cluster: PREDICTED: similar to Tyrosine-p... 33 8.6
UniRef50_A0YER0 Cluster: Putative uncharacterized protein; n=1; ... 33 8.6
UniRef50_A5K2A3 Cluster: Putative uncharacterized protein; n=1; ... 33 8.6
UniRef50_P21127 Cluster: PITSLRE serine/threonine-protein kinase... 33 8.6
>UniRef50_P41042 Cluster: 40S ribosomal protein S4; n=38;
Eukaryota|Rep: 40S ribosomal protein S4 - Drosophila
melanogaster (Fruit fly)
Length = 261
Score = 440 bits (1084), Expect = e-122
Identities = 201/251 (80%), Positives = 224/251 (89%)
Frame = +1
Query: 4 LKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQR 183
LKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+IFLRNRLKYAL G EV KIV QR
Sbjct: 9 LKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAEVTKIVMQR 68
Query: 184 LIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKR 363
L+KVDGKVRTDPTYPAG+MDV+++EKT E FRL+YDVKGRF IHRI+ EEAKYKLCKVK+
Sbjct: 69 LVKVDGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKK 128
Query: 364 VATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRN 543
G K VP+LVTHDGRTIRYPDPLI NDS+Q+DIA+ KI D+IKF+SGNLCMITGGRN
Sbjct: 129 TQLGAKGVPFLVTHDGRTIRYPDPLIHANDSVQVDIASGKITDYIKFDSGNLCMITGGRN 188
Query: 544 LGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRXNNVFIIGKGTKAYISLPRGKGIRLTI 723
LGRVGT+V+RERHPGSFDIVHIKDS GH FATR NVFIIGKG K YISLP+GKG++L+I
Sbjct: 189 LGRVGTVVNRERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNKPYISLPKGKGVKLSI 248
Query: 724 XEERDKRIATK 756
EERDKR+A K
Sbjct: 249 AEERDKRLAAK 259
>UniRef50_P62701 Cluster: 40S ribosomal protein S4, X isoform;
n=137; Eukaryota|Rep: 40S ribosomal protein S4, X
isoform - Homo sapiens (Human)
Length = 263
Score = 428 bits (1054), Expect = e-119
Identities = 191/251 (76%), Positives = 222/251 (88%)
Frame = +1
Query: 4 LKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQR 183
LKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI QR
Sbjct: 9 LKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQR 68
Query: 184 LIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKR 363
IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV++
Sbjct: 69 FIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRK 128
Query: 364 VATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRN 543
+ G K +P+LVTHD RTIRYPDPLIKVND+IQ+D+ T KI DFIKF++GNLCM+TGG N
Sbjct: 129 IFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGAN 188
Query: 544 LGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRXNNVFIIGKGTKAYISLPRGKGIRLTI 723
LGR+G I +RERHPGSFD+VH+KD+ G++FATR +N+F+IGKG K +ISLPRGKGIRLTI
Sbjct: 189 LGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTI 248
Query: 724 XEERDKRIATK 756
EERDKR+A K
Sbjct: 249 AEERDKRLAAK 259
>UniRef50_UPI000065EA48 Cluster: similar to 40S ribosomal protein
S4, X isoform (LOC126235), mRNA; n=1; Takifugu
rubripes|Rep: similar to 40S ribosomal protein S4, X
isoform (LOC126235), mRNA - Takifugu rubripes
Length = 291
Score = 230 bits (563), Expect(2) = e-112
Identities = 97/140 (69%), Positives = 123/140 (87%)
Frame = +1
Query: 337 KYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGN 516
+YKLCKVK++ G K +P+LVTHD RTIRYPDPLIKVND++++D+ T KI DFIKF++ N
Sbjct: 152 QYKLCKVKKILIGTKGIPHLVTHDARTIRYPDPLIKVNDTVRIDLDTGKITDFIKFDTSN 211
Query: 517 LCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRXNNVFIIGKGTKAYISLP 696
+CM+TGG NLGR+G I +RERHPGSFD+VH+KDSTG++FATR +N+F+IGKG K ++SLP
Sbjct: 212 MCMVTGGANLGRIGVITNRERHPGSFDVVHVKDSTGNSFATRLSNIFVIGKGNKPWVSLP 271
Query: 697 RGKGIRLTIXEERDKRIATK 756
RGKGIRLTI EERDKR+A K
Sbjct: 272 RGKGIRLTIAEERDKRLAAK 291
Score = 199 bits (485), Expect(2) = e-112
Identities = 92/112 (82%), Positives = 100/112 (89%)
Frame = +1
Query: 4 LKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQR 183
LKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI QR
Sbjct: 9 LKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQR 68
Query: 184 LIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 339
IK+DGKVRTD TYP GFMDV+SI+KT E FRLIYDVKGRFT+HRIT EEAK
Sbjct: 69 FIKIDGKVRTDITYPTGFMDVISIDKTGEHFRLIYDVKGRFTVHRITAEEAK 120
>UniRef50_P49204 Cluster: 40S ribosomal protein S4-2; n=55;
Eukaryota|Rep: 40S ribosomal protein S4-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 262
Score = 382 bits (939), Expect = e-105
Identities = 174/253 (68%), Positives = 210/253 (83%)
Frame = +1
Query: 4 LKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQR 183
LKRLNAPK WMLDKLGG +AP+PS+GPHK RECLPLV+ +RNRLKYALT EV+ I+ QR
Sbjct: 9 LKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREVISILMQR 68
Query: 184 LIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKR 363
I+VDGKVRTD TYPAGFMDVVSI KTNE FRL+YD KGRF +H I EEAK+KLCKV+
Sbjct: 69 HIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCKVRS 128
Query: 364 VATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRN 543
+ G K +PYL T+DGRTIRYPDPLIK ND+I+LD+ KI++FIKF+ GN+ M+TGGRN
Sbjct: 129 IQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNVVMVTGGRN 188
Query: 544 LGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRXNNVFIIGKGTKAYISLPRGKGIRLTI 723
GRVG I +RE+H GSF+ +HI+DSTGH FATR NV+ IGKGTK ++SLP+GKGI+LTI
Sbjct: 189 RGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKGKGIKLTI 248
Query: 724 XEERDKRIATKVA 762
EE KR+A++ A
Sbjct: 249 IEEARKRLASQQA 261
>UniRef50_UPI0000499069 Cluster: 40S ribosomal protein S4; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S4 - Entamoeba histolytica HM-1:IMSS
Length = 326
Score = 327 bits (804), Expect = 2e-88
Identities = 145/248 (58%), Positives = 190/248 (76%)
Frame = +1
Query: 4 LKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQR 183
LKRLNAP WML KLGG +AP+PS GPH ++ECLPL++ LRNRL YAL G EV IVK R
Sbjct: 9 LKRLNAPHHWMLSKLGGTFAPKPSHGPHGMKECLPLILILRNRLNYALNGREVTMIVKNR 68
Query: 184 LIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKR 363
IK+DGK+RTD YP GFMDV+SI +T E FRL+Y+ K RF + +T E+AK+KLCK+++
Sbjct: 69 TIKIDGKIRTDTRYPVGFMDVLSIPRTKENFRLMYNTKRRFCLVPLTAEQAKFKLCKIEK 128
Query: 364 VATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRN 543
G +PY+VTHDGRTIRYP P ++ ND+I+L++ T KI+DF+KF+ GN M+ GG
Sbjct: 129 RVLGTGAIPYIVTHDGRTIRYPHPELQANDTIKLNLETGKIVDFVKFDIGNTAMMIGGNG 188
Query: 544 LGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRXNNVFIIGKGTKAYISLPRGKGIRLTI 723
+GRVG IV RE HPGSF+IVHIKD+ G+TF TR NNVF+IGKGT+ ++LP KGI+ +
Sbjct: 189 MGRVGVIVKREVHPGSFEIVHIKDAKGNTFTTRLNNVFVIGKGTETLVNLPLDKGIKKPL 248
Query: 724 XEERDKRI 747
++ ++ I
Sbjct: 249 LQQVNETI 256
>UniRef50_UPI00005A08FF Cluster: PREDICTED: similar to 40S ribosomal
protein S4, X isoform; n=3; Eutheria|Rep: PREDICTED:
similar to 40S ribosomal protein S4, X isoform - Canis
familiaris
Length = 240
Score = 235 bits (575), Expect(2) = 3e-88
Identities = 100/151 (66%), Positives = 126/151 (83%)
Frame = +1
Query: 289 DVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLD 468
D KGRF +HRITPEEAKYKL KV+++ G K +P+LVTHD RTIRYPDPLIK+ND+IQ+D
Sbjct: 76 DTKGRFAVHRITPEEAKYKLGKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKMNDTIQID 135
Query: 469 IATTKIMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRXN 648
+ T KI DF KF++GNLCM+TGG NLGR+G I +RE HPGSFD+VH+KD+ G++FATR +
Sbjct: 136 LETGKITDFFKFDTGNLCMVTGGTNLGRIGVITNRENHPGSFDVVHVKDANGNSFATRLS 195
Query: 649 NVFIIGKGTKAYISLPRGKGIRLTIXEERDK 741
N+F+IGKG +ISLP GKGIR TI EE+ +
Sbjct: 196 NIFVIGKGNIPWISLPHGKGIRFTIAEEKKR 226
Score = 113 bits (272), Expect(2) = 3e-88
Identities = 52/67 (77%), Positives = 57/67 (85%)
Frame = +1
Query: 4 LKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQR 183
LK + APK WMLDKL GV+AP PSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI Q
Sbjct: 9 LKHVAAPKHWMLDKLTGVFAPHPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKIRMQH 68
Query: 184 LIKVDGK 204
IK+DGK
Sbjct: 69 FIKMDGK 75
>UniRef50_A2ECC6 Cluster: 40S ribosomal protein S4-C, putative; n=4;
Trichomonas vaginalis G3|Rep: 40S ribosomal protein
S4-C, putative - Trichomonas vaginalis G3
Length = 269
Score = 291 bits (714), Expect = 1e-77
Identities = 134/242 (55%), Positives = 177/242 (73%)
Frame = +1
Query: 4 LKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQR 183
LKRL AP W+L K G +A PSTGPHKLRECLP+ IFLR+RLKYALT E + IVK+R
Sbjct: 23 LKRLTAPHHWLLAKSAGKFASHPSTGPHKLRECLPINIFLRDRLKYALTAKEAVAIVKRR 82
Query: 184 LIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKR 363
L+KVDGKVRT+ YP G MDV+ + K+NELFR+IYD KGRF +H I +EA +KL +V +
Sbjct: 83 LVKVDGKVRTNYRYPTGLMDVIELGKSNELFRIIYDCKGRFCVHHIEAKEASFKLLRVNQ 142
Query: 364 VATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRN 543
G K +P++VTHDGRTI Y DP ++V+D+++ +I T ++ IKF+ G++ M+T G N
Sbjct: 143 FKIGAKGIPHVVTHDGRTISYVDPSVRVHDALKFNIKTGEVESVIKFKVGDVAMVTAGGN 202
Query: 544 LGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRXNNVFIIGKGTKAYISLPRGKGIRLTI 723
+GRVGTI E+ SFDIVH+KD++G FATR NVF+IG+ ISLP +G+R +I
Sbjct: 203 VGRVGTIQKIEKQMASFDIVHLKDTSGAVFATRIMNVFVIGENEHPLISLPAREGVRPSI 262
Query: 724 XE 729
E
Sbjct: 263 LE 264
>UniRef50_Q9XG32 Cluster: 40S ribosomal protein S4; n=1; Guillardia
theta|Rep: 40S ribosomal protein S4 - Guillardia theta
(Cryptomonas phi)
Length = 257
Score = 288 bits (706), Expect = 1e-76
Identities = 134/245 (54%), Positives = 181/245 (73%), Gaps = 1/245 (0%)
Frame = +1
Query: 7 KRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRL 186
KRLNAPK W+L+KLGG++APR S+GPHK + +PLVI +RN+LKY+ E L I+K+
Sbjct: 10 KRLNAPKKWLLNKLGGIWAPRSSSGPHKKQNSIPLVIVIRNKLKYSTNQRESLNILKKNE 69
Query: 187 IKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRV 366
I VDGKVR D +PAG MDV+SI+ T E +R++YD G F +HRIT +E+ +KLCKV RV
Sbjct: 70 IYVDGKVRADKNFPAGVMDVISIKTTKENYRVLYDNVGHFFLHRITIKESMFKLCKVIRV 129
Query: 367 ATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNL 546
+ G K +PY+VTHDGRTIR+P+ LIK NDSI LD+ K++DFIKF G+LC++ G N+
Sbjct: 130 SIGSKGIPYIVTHDGRTIRFPNLLIKSNDSIVLDLLNNKVIDFIKFSIGSLCVVIKGSNI 189
Query: 547 GRVGTIVSRERHPGSFDIVHIKDSTGHTFATRXNNVFIIGKGTKAYISLPRGKGIR-LTI 723
GR+G ++ GS IV +KD G +F+T+ N+F+IGKGTK++ISLPR +G+R LT
Sbjct: 190 GRIGVFINTIGGQGSDSIVCLKDFNGSSFSTQTKNLFVIGKGTKSFISLPRFRGLRTLTK 249
Query: 724 XEERD 738
E D
Sbjct: 250 SLEHD 254
>UniRef50_UPI0000D9EB72 Cluster: PREDICTED: similar to 40S ribosomal
protein S4, X isoform; n=1; Macaca mulatta|Rep:
PREDICTED: similar to 40S ribosomal protein S4, X
isoform - Macaca mulatta
Length = 244
Score = 287 bits (704), Expect = 2e-76
Identities = 138/231 (59%), Positives = 173/231 (74%)
Frame = +1
Query: 4 LKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQR 183
LKR+ A + WMLDKL GV+A RPSTGPHKLRECLP IFLRNRLKYALTG+EV KI Q
Sbjct: 20 LKRVAALQHWMLDKLTGVFAARPSTGPHKLRECLPH-IFLRNRLKYALTGDEVKKICMQW 78
Query: 184 LIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKR 363
IKVDGK+RTD P MDV+SI+K E F LIY + RF +HRITPEE KYKLCK+++
Sbjct: 79 FIKVDGKIRTDNNLPYWIMDVISIDKMGEDFCLIYGINRRFALHRITPEEVKYKLCKMRK 138
Query: 364 VATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRN 543
+ K +P+LV HD T+R+PD LIKVND+IQ+D+ T KI +KF++GNLC++TGG N
Sbjct: 139 IFVRAKGIPHLVIHDIHTVRHPDSLIKVNDTIQIDLETGKI-TALKFDTGNLCLVTGGGN 197
Query: 544 LGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRXNNVFIIGKGTKAYISLP 696
GR+G I +RERHP SFD H+KD+ ++F+ +F+I KG K +ISLP
Sbjct: 198 WGRIGVITNRERHPVSFDTFHVKDANSNSFSI----IFVIDKGNKPWISLP 244
>UniRef50_UPI00006CBCC9 Cluster: Ribosomal family S4e containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal family S4e containing protein - Tetrahymena
thermophila SB210
Length = 370
Score = 273 bits (670), Expect = 3e-72
Identities = 125/232 (53%), Positives = 165/232 (71%), Gaps = 2/232 (0%)
Frame = +1
Query: 61 APRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIV--KQRLIKVDGKVRTDPTYPAG 234
A RPS GPHKLRE LPL + L+ RL YAL G +V I+ K++ + VDGKVR D YP G
Sbjct: 138 ATRPSQGPHKLRESLPLSVLLKERLNYALNGRDVTLILNDKEQNVFVDGKVRRDKGYPTG 197
Query: 235 FMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGR 414
MDVV IEKT++ FR++YD KGRF + ++ EEAKYKL KV A GP +PY+VTHD R
Sbjct: 198 LMDVVRIEKTDQSFRILYDTKGRFVLKSLSKEEAKYKLLKVTAKAIGPNQIPYIVTHDSR 257
Query: 415 TIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGSF 594
TIR+P+P IK+ D+++ D+ KI +F ESGN+C I G N+GRVG I E+H GSF
Sbjct: 258 TIRFPNPEIKIGDTLKYDLVNNKIENFAHLESGNVCYIQQGNNIGRVGIIQHIEKHQGSF 317
Query: 595 DIVHIKDSTGHTFATRXNNVFIIGKGTKAYISLPRGKGIRLTIXEERDKRIA 750
DI H+KD+ G+ FATR N+F++G+G K++I LP G G+R TI EER ++ +
Sbjct: 318 DICHVKDAKGNAFATRLGNIFVLGQGKKSWIELPSGDGVRETILEERKRKFS 369
>UniRef50_Q7KJQ3 Cluster: 40S ribosomal protein S4; n=9;
Eukaryota|Rep: 40S ribosomal protein S4 - Leishmania
major
Length = 273
Score = 273 bits (670), Expect = 3e-72
Identities = 128/249 (51%), Positives = 169/249 (67%), Gaps = 1/249 (0%)
Frame = +1
Query: 4 LKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQR 183
LKRL APK WML KL GV+APRP GPHKLRECLPL++ +RNRLKYAL E I++Q
Sbjct: 6 LKRLYAPKDWMLSKLTGVFAPRPRPGPHKLRECLPLLVIIRNRLKYALNAREGEMILRQG 65
Query: 184 LIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKR 363
L+ VD R D YPAGFMDVV I KT + FRL+YDVKGRF + ++ EA+ KL KV
Sbjct: 66 LVHVDNHPRRDGKYPAGFMDVVEIPKTGDRFRLMYDVKGRFALVNLSEAEAQIKLMKVVN 125
Query: 364 VATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRN 543
+ T VP VTHDG IRYPDP + D+I ++ K +D IK G ++TGG N
Sbjct: 126 LYTATGRVPVAVTHDGHRIRYPDPHTSIGDTIVYNVKEKKCVDLIKNRQGKAVIVTGGAN 185
Query: 544 LGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRXNNVFIIGKG-TKAYISLPRGKGIRLT 720
GR+G IV E HPG+F+I H+KD++G FATR N+F+IGK +++P+ +G+R+
Sbjct: 186 RGRIGEIVKVECHPGAFNIAHLKDASGAEFATRAANIFVIGKDLNNLQVTVPKQQGLRMN 245
Query: 721 IXEERDKRI 747
+ +ER++R+
Sbjct: 246 VIQEREERL 254
>UniRef50_Q8SRB9 Cluster: 40S RIBOSOMAL PROTEIN S4; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S4 -
Encephalitozoon cuniculi
Length = 268
Score = 182 bits (444), Expect = 7e-45
Identities = 93/253 (36%), Positives = 157/253 (62%), Gaps = 1/253 (0%)
Frame = +1
Query: 4 LKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQR 183
LKR APK+WMLDK GG +A P++GPHK EC+PL + L+YA E+ I+ ++
Sbjct: 9 LKRKTAPKSWMLDKQGGTFALMPASGPHKKTECIPLGYLISRFLRYASNFKELSIILAEK 68
Query: 184 LIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKR 363
IKV+G+VRT+ +P G DVVSIEKT E FR++Y+V +F +HRI+ EEA Y+L KV +
Sbjct: 69 NIKVNGRVRTNSHFPVGLFDVVSIEKTGEHFRVLYNVHKKFHLHRISSEEASYRLTKVTK 128
Query: 364 VATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRN 543
+ +PY+V+ G +IR+ DP I + +I++ T+K++++I + ++ G+
Sbjct: 129 KYEN-QGIPYIVSSCGLSIRFCDPAIDLGYTIKISNETSKVIEYIVPGPDKVIFVSRGKA 187
Query: 544 LGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRXNNVFIIGKGTK-AYISLPRGKGIRLT 720
GRVG +++ G + + D G+TF+ + +IG+ ++ +I+LP+ +GIR +
Sbjct: 188 RGRVG-VINTISTQGKETVYGMTDFAGNTFSCTSKSCILIGESSENIWITLPKERGIRQS 246
Query: 721 IXEERDKRIATKV 759
E+ + ++ +
Sbjct: 247 ELEKINAQLGEMI 259
>UniRef50_Q9YF85 Cluster: 30S ribosomal protein S4e; n=4;
Desulfurococcales|Rep: 30S ribosomal protein S4e -
Aeropyrum pernix
Length = 253
Score = 143 bits (346), Expect = 5e-33
Identities = 88/243 (36%), Positives = 132/243 (54%), Gaps = 10/243 (4%)
Frame = +1
Query: 4 LKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQR 183
LK L AP+ W + + +A +P GPH + LPL++ +RN L YA T E K++ +
Sbjct: 10 LKALAAPRFWPILRKEYKWAVKPRPGPHPAEKSLPLLLIVRNVLGYAQTAREARKLISEG 69
Query: 184 LIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLI-YDVKGRFTIHRITPEEAKYKLCKVK 360
+VDG VR D +P GFMDV+ + T E FR++ Y VK F +H I EE K +++
Sbjct: 70 HFRVDGVVRKDYKFPVGFMDVIEVVDTGEKFRMLPYPVK-FFKLHPIPEEEGDLKPVRIE 128
Query: 361 RVATGPKNVPYLVTHDGRTI--RYPDP------LIKVNDSIQLDIATTKIMDFIKFESGN 516
T L HDGR I R DP + + D++ + + +I IKF G
Sbjct: 129 NKTTVKGGHVQLNLHDGRNILVRVKDPRNPVEDVYRTMDTLLITVPGQEIKGHIKFGEGA 188
Query: 517 LCMITGGRNLGRVGTIVSRERHPG-SFDIVHIKDSTGHTFATRXNNVFIIGKGTKAYISL 693
+ +I GGRN+GRVG + S ++ G +V ++D++G+ F T + VF+IG + ISL
Sbjct: 189 IAIIVGGRNVGRVGVVKSVQKGWGRKRTLVTLEDASGNLFQTSLDYVFVIGL-DRPVISL 247
Query: 694 PRG 702
P G
Sbjct: 248 PEG 250
>UniRef50_Q8TW18 Cluster: 30S ribosomal protein S4e; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S4e -
Methanopyrus kandleri
Length = 260
Score = 130 bits (314), Expect = 4e-29
Identities = 80/238 (33%), Positives = 123/238 (51%), Gaps = 16/238 (6%)
Frame = +1
Query: 4 LKRLNAPKAWMLD-KLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQ 180
+KRL AP AW + K GG +APRP GPH + +PL+I +R+ L YA E KI+ +
Sbjct: 12 VKRLAAPYAWPIPRKEGGKFAPRPYPGPHTMDTSVPLLILVRDMLGYADYAREARKIITR 71
Query: 181 RLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVK 360
I VDG VR +P +P G MDVV I +T + +R++ + R + I+ EEA+ K+C++K
Sbjct: 72 GEIYVDGVVRKEPKFPVGIMDVVEIPRTGDRYRVVMNEHHRLDVVPISEEEARVKVCRIK 131
Query: 361 RVATGPKNVPYLVTHDGRT--IRYPDP------LIKVNDSIQLDI------ATTKIMDFI 498
+ HDG+ + DP + V DS+ L++ + K++D I
Sbjct: 132 NKTYVRGGNLQITMHDGKNWLVEIEDPTDPKEDVYSVGDSLVLELPEPDSGESWKVVDHI 191
Query: 499 KFESGNLCMITGGRNLGRVGTIVSRERHPG-SFDIVHIKDSTGHTFATRXNNVFIIGK 669
FE G GR+ G VG +V + G D++ +++ G F T + IGK
Sbjct: 192 PFEEGVWVYAMTGRHSGEVGRVVEIQTFEGPQEDLITVENPEGDQFQTTKGRLIAIGK 249
>UniRef50_P62428 Cluster: 30S ribosomal protein S4e; n=12;
Euryarchaeota|Rep: 30S ribosomal protein S4e -
Methanococcus maripaludis
Length = 244
Score = 130 bits (313), Expect = 5e-29
Identities = 80/232 (34%), Positives = 121/232 (52%), Gaps = 10/232 (4%)
Frame = +1
Query: 4 LKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQR 183
LKRL AP W L + + RPS GPH + + LPL++ +R+ LKYA E KI++
Sbjct: 10 LKRLAAPANWQLPRKVKTFTVRPSPGPHSMDKSLPLLLVVRDVLKYADNAREAKKIIQTG 69
Query: 184 LIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKV-- 357
I +DG R + +PAG MDV+SI + +E + +++D GR ++ + ++ KLCK+
Sbjct: 70 KILIDGLKRKEYKHPAGLMDVLSIPEMDETYLVLFDESGRISLKK--TDKTDVKLCKIVN 127
Query: 358 KRVATGPKNVPYLVTHDGR--------TIRYPDPLIKVNDSIQLDIATTKIMDFIKFESG 513
K V G N+ L HDGR + + + K DS+ + I I + F G
Sbjct: 128 KTVVKG-GNI-QLNLHDGRNQIVKVSDAAKAEEDVYKTGDSVLISIPEQSIAGHVAFGEG 185
Query: 514 NLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRXNNVFIIGK 669
L ITGG+++G IV E DIV +++ G F T VFI+G+
Sbjct: 186 KLAYITGGKHVGEFAKIVEVENRALYSDIVTLENKDGEKFKTVKPYVFIVGQ 237
>UniRef50_A5UL76 Cluster: Ribosomal protein S4e; n=2;
Methanobacteriaceae|Rep: Ribosomal protein S4e -
Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM
861)
Length = 242
Score = 125 bits (302), Expect = 1e-27
Identities = 74/234 (31%), Positives = 120/234 (51%), Gaps = 4/234 (1%)
Frame = +1
Query: 4 LKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQR 183
LK APK W + + +PS G H + L L + +R+ LK A E +I+
Sbjct: 10 LKTYKAPKTWPIHPKEDTWTVKPSAGSHSIENSLSLTLVIRDILKLADNSREAKRIINSG 69
Query: 184 LIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKR 363
+ VDG+V D +P GFMD++ I KT E++R++ D KGR +++I EE KLCK+
Sbjct: 70 NVLVDGRVIKDYKFPVGFMDIIEIPKTGEVYRVLLDKKGRLQLNKI--EENDSKLCKIVN 127
Query: 364 VATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRN 543
+T + HDG+ + + V D I L + +I + + + G +ITGG++
Sbjct: 128 KSTIKGGKIQVNLHDGKNVIIDENDYNVGDVIDLKVPDHEINEVFELKEGACVLITGGKH 187
Query: 544 LGRVGT----IVSRERHPGSFDIVHIKDSTGHTFATRXNNVFIIGKGTKAYISL 693
G +GT IV+ +P + + I++S F T + F++G+ A ISL
Sbjct: 188 TGELGTVSEIIVNESSNPNT---IIIENSAKDEFLTLKDYAFVVGEDAPA-ISL 237
>UniRef50_A1RWS3 Cluster: Ribosomal protein S4E, central; n=1;
Thermofilum pendens Hrk 5|Rep: Ribosomal protein S4E,
central - Thermofilum pendens (strain Hrk 5)
Length = 251
Score = 120 bits (289), Expect = 4e-26
Identities = 74/231 (32%), Positives = 116/231 (50%), Gaps = 9/231 (3%)
Frame = +1
Query: 4 LKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQR 183
L+R AP W + + V+ +PS GPH L +P+ I LR+ YA T E +I+ R
Sbjct: 12 LRRSVAPPFWPIKRKEYVWTVKPSPGPHSLLSSIPIGIVLRDVFGYAKTMKEARRILASR 71
Query: 184 LIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKR 363
+I+VDG+V TD +P G MDV+ I + +R++ D + I PEEA YKL +++R
Sbjct: 72 VIEVDGRVVTDYKFPVGLMDVLHIIPEEKYYRVVPDPARKLRFVEIKPEEAGYKLAQIRR 131
Query: 364 VATGPKNVPYLVTHDGRTI-------RYPDPL-IKVNDSIQLDIATTKIMDFIKFESGNL 519
T HDGR + Y + K D++ + I I+ + FE G L
Sbjct: 132 KMTVKNGDLQFTLHDGRNVLIRKGSEAYSTAISYKTYDALLITIPRQSIVSHVPFEVGTL 191
Query: 520 CMITGGRNLGRVGTI-VSRERHPGSFDIVHIKDSTGHTFATRXNNVFIIGK 669
++ GRN+G +G I ++ S +V ++D++G T V +GK
Sbjct: 192 AIVVDGRNVGFMGRINAIQQVFKRSRALVELEDASGAKSRTILQYVLPVGK 242
>UniRef50_Q56230 Cluster: 30S ribosomal protein S4e; n=3;
Thermoplasma|Rep: 30S ribosomal protein S4e -
Thermoplasma acidophilum
Length = 235
Score = 119 bits (286), Expect = 1e-25
Identities = 73/231 (31%), Positives = 116/231 (50%), Gaps = 1/231 (0%)
Frame = +1
Query: 7 KRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRL 186
KRL + + + + P P+ G H + + L+ +R+ LK + E +I+ L
Sbjct: 6 KRLMVSRQVKIPRKTYFWGPTPNPGMHPKDQSVTLLSIIRDYLKLSDKEREAARILANGL 65
Query: 187 IKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRV 366
+KVDGK + + GFMDV+ I E +R++Y+ +G + + T E A KL KV+
Sbjct: 66 VKVDGKTVREKKFAVGFMDVIEIN--GESYRVVYNDQGALVLMKETKERASMKLLKVRSK 123
Query: 367 ATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNL 546
P N L THDGRT D KV D + + KI + IK + GN IT G ++
Sbjct: 124 VIAPGNRIQLGTHDGRTFITDDKSKKVGDVWAVSVPDMKISEIIKMQPGNKAYITAGSHV 183
Query: 547 GRVGTIVSRERHPG-SFDIVHIKDSTGHTFATRXNNVFIIGKGTKAYISLP 696
+ GTI E G S ++VH ++ F+T ++VF+IG +++ P
Sbjct: 184 NQTGTISKIEAKEGSSANLVHFQEG----FSTIKDHVFMIGSSKFSFVLSP 230
>UniRef50_A3H986 Cluster: Ribosomal protein S4E; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein S4E -
Caldivirga maquilingensis IC-167
Length = 237
Score = 116 bits (280), Expect = 5e-25
Identities = 68/225 (30%), Positives = 109/225 (48%), Gaps = 3/225 (1%)
Frame = +1
Query: 4 LKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQR 183
L+R +P+ W +++ G ++ +PS GPH +PL + LR+ YA T E I+ +
Sbjct: 4 LRRSTSPEWWPVERKGAPWSIKPSPGPHPANSSIPLAVLLRDVFHYAKTLREARLIIGKG 63
Query: 184 LIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKR 363
+KVDGKVR D YP G MDV+ + NE +R+I D RI EA K+C+++
Sbjct: 64 YVKVDGKVRRDYKYPVGLMDVIELTPINEYYRIIPDPVNFLRPIRIDKSEAGVKVCRIED 123
Query: 364 VATGPKNVPYLVTHDGRTI---RYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITG 534
L HDGR I + + S+ +++ K+MD+ + +
Sbjct: 124 KTMVKAGKIQLNLHDGRNIIVDQDEGRKYETLGSVVVNLEDGKLMDYYPMQPNQYVIAFN 183
Query: 535 GRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRXNNVFIIGK 669
G N+GR GT+++ R D + + F T N + +IGK
Sbjct: 184 GVNVGRHGTLINWVRSFRKRDAIATVKAKDSEFRTVLNYLLVIGK 228
>UniRef50_A3CT09 Cluster: Ribosomal protein S4E, central; n=3;
Methanomicrobiales|Rep: Ribosomal protein S4E, central -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 242
Score = 113 bits (272), Expect = 5e-24
Identities = 75/233 (32%), Positives = 112/233 (48%), Gaps = 7/233 (3%)
Frame = +1
Query: 4 LKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQR 183
LKRL AP +W + K + + + GPH LP+ ++LR + A +EV KI+ QR
Sbjct: 5 LKRLVAPGSWHIPKKVQKFVMKTAPGPHNAG-ALPVGVWLREHIGLAQNASEVKKILHQR 63
Query: 184 LIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKR 363
+ V+G+ D G D+VSI K + +R+ DVKG I E AK +LCK++
Sbjct: 64 DVLVNGRACKDSRMGLGVFDIVSIPKLGKHYRIQLDVKGNLVAIEIPAESAKTRLCKIRN 123
Query: 364 VATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATT-----KIMDFIKFESGNLCMI 528
T L G + D K DS+ + + T +I+D + GN+ MI
Sbjct: 124 KTTVKGGKVQLNFAFGANV-LADNTYKAKDSVVVTLGTDGEDRFRIVDHFPYAEGNVAMI 182
Query: 529 TGGRNLGRVGTIVSRERHPGSF--DIVHIKDSTGHTFATRXNNVFIIGKGTKA 681
GG++ G+VG IV R S ++ DS G F T VF++G+ A
Sbjct: 183 VGGKHSGKVGRIVEIIRTASSVPNHVILTDDSAGERFETIEEYVFMVGRSAIA 235
>UniRef50_Q8ZTD3 Cluster: 30S ribosomal protein S4e; n=4;
Pyrobaculum|Rep: 30S ribosomal protein S4e - Pyrobaculum
aerophilum
Length = 238
Score = 113 bits (272), Expect = 5e-24
Identities = 70/191 (36%), Positives = 98/191 (51%), Gaps = 4/191 (2%)
Frame = +1
Query: 4 LKRLNAPKAWMLD-KLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQ 180
L+R AP W + K GGV+ RPS GPH L LPL + +R+ LKYA T +E I+ +
Sbjct: 4 LRRTLAPAWWPIPRKKGGVWVVRPSPGPHSLAYSLPLALIIRDVLKYAKTMHEARYIISR 63
Query: 181 RLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVK 360
+KVDG VR D +P G MDV+ I T E++R++ D + + I+ EEA KL +V+
Sbjct: 64 GYVKVDGVVRRDYKFPVGLMDVIEIVPTGEVYRVVPDADKYYNLLPISTEEAALKLLRVE 123
Query: 361 RVATGPKNVPYLVTHDGR---TIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMIT 531
L HDGR T IK DS+ D+ I I + G ++
Sbjct: 124 GKTMVKGGRIQLHFHDGRNLITTLEAGKQIKTFDSVLYDLRNKAIKAHIPLKLGVNAVVI 183
Query: 532 GGRNLGRVGTI 564
G N+G GT+
Sbjct: 184 HGSNVGFSGTL 194
>UniRef50_Q8PV38 Cluster: 30S ribosomal protein S4e; n=4;
Euryarchaeota|Rep: 30S ribosomal protein S4e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 235
Score = 112 bits (269), Expect = 1e-23
Identities = 69/222 (31%), Positives = 108/222 (48%), Gaps = 1/222 (0%)
Frame = +1
Query: 7 KRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRL 186
KRL+ PK+W + + G + GPH LPL + +R+ LK E +I+ +
Sbjct: 5 KRLSVPKSWKVGRKGNKWISTTRPGPHSQARSLPLGLIIRDVLKLVDNNREGKRILSEGK 64
Query: 187 IKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRV 366
+ VDG R D +P G DV+++ NE +R++ D KGR ++++ E KLC++
Sbjct: 65 VLVDGISRKDLRFPVGLFDVITLPLVNEAYRMLQDEKGRLVLYKLN-ETNVNKLCRINNK 123
Query: 367 ATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNL 546
T L +DG I + DS+ L I ++ +KFE GNL M+ GG++
Sbjct: 124 TTVKGGKIQLNLNDGTNILGSND-YGTKDSLILSIPDKHVVKHLKFEVGNLAMVIGGQHS 182
Query: 547 GRVGTIVS-RERHPGSFDIVHIKDSTGHTFATRXNNVFIIGK 669
G G I+ RE + V I T F T + V +IG+
Sbjct: 183 GETGKIMEIREVKSSRHNTVMISGET--DFETIEDYVIVIGE 222
>UniRef50_Q40941 Cluster: 40S ribosomal protein S4; n=2;
Bigelowiella natans|Rep: 40S ribosomal protein S4 -
Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 242
Score = 110 bits (265), Expect = 4e-23
Identities = 58/229 (25%), Positives = 112/229 (48%)
Frame = +1
Query: 7 KRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRL 186
KR+++ K G++ + S+GPH + + L+ ++ A E K+VK
Sbjct: 10 KRISSNTMIKYKKKLGIFNTKISSGPHSKVKSVSLLNIIKKFFHLADNNQEAQKVVKTGF 69
Query: 187 IKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRV 366
+ V+GK +P MD +S N+ +R++ G+ T++ I E K+CKV ++
Sbjct: 70 LYVNGKKCLSHKFPISLMDTISFPLANKHYRVLLSKAGKLTVYEINQNEKDLKICKVIKI 129
Query: 367 ATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNL 546
++T D R ++ IKV DS+ + +I+ +KFE G+LC+IT G++L
Sbjct: 130 INASSKNKIIITDDLRELKINYAKIKVEDSLLIKTINDEIVYALKFEVGSLCLITRGKHL 189
Query: 547 GRVGTIVSRERHPGSFDIVHIKDSTGHTFATRXNNVFIIGKGTKAYISL 693
G + I + ++H++ G + +++ +IG+ + +SL
Sbjct: 190 GTIAVIKEIRKTKSLRKMIHLEKIDGKKLTKKCSDLLVIGESKTSILSL 238
>UniRef50_Q0W1X6 Cluster: 30S ribosomal protein S4E; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S4E -
Uncultured methanogenic archaeon RC-I
Length = 234
Score = 110 bits (264), Expect = 5e-23
Identities = 68/226 (30%), Positives = 108/226 (47%)
Frame = +1
Query: 4 LKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQR 183
LKR+ AP+ W + + + +P G H +PLV+ LR+ LK A +E+ KI+ +
Sbjct: 6 LKRVAAPRTWPITRKTSKWVAKPMPGAHSEERGMPLVVVLRDLLKVADNTSEIKKILHEG 65
Query: 184 LIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKR 363
+ VDGKVR D Y G D +SI N +R++ + G+F H + +A K+CK+
Sbjct: 66 KVLVDGKVRKDYRYTVGMFDTISIPAINANYRVVIGMDGKF--HLVPVTDASAKICKIVN 123
Query: 364 VATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRN 543
L HDG T+ + K DS+ L + KI + G+L M+T G++
Sbjct: 124 KTALRGGKIQLNLHDGTTMIASND-YKTKDSVILKMPERKIDQHFTYAVGSLVMVTEGKH 182
Query: 544 LGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRXNNVFIIGKGTKA 681
G +G + + S + + F T VF+IGK + A
Sbjct: 183 SGEIGKVKEIKVVRSSAPNTVVITTPEGDFETIEQYVFVIGKDSPA 228
>UniRef50_UPI000038E22A Cluster: hypothetical protein Faci_03001139;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03001139 - Ferroplasma acidarmanus fer1
Length = 241
Score = 104 bits (249), Expect = 3e-21
Identities = 64/222 (28%), Positives = 114/222 (51%), Gaps = 2/222 (0%)
Frame = +1
Query: 7 KRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRL 186
K + A + + + ++ P+ H + +P++I LR+ LK E+ +I+ +
Sbjct: 7 KIMMASRKLKIPRKTNFWSVTPTPATHSKEDSIPMLIALRDYLKLGDKEREITRILNNNM 66
Query: 187 IKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCK-VKR 363
+KVDG++ D +P GFMDV+SI+ + ++YD KG+ I + P KL K VK+
Sbjct: 67 VKVDGRIVKDRRFPVGFMDVLSIDTLENDYIIVYDRKGKLVIRQNAPGNKGLKLFKVVKK 126
Query: 364 VATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRN 543
G + L HDG+TI I +D + + I +I + +K G+ ITGG +
Sbjct: 127 TIIGTGKI-QLGFHDGKTIVTDRKDINTSDVLLMKIPDLEIENVLKIAEGDKVFITGGSH 185
Query: 544 LGRVGTIVSRERHPGSF-DIVHIKDSTGHTFATRXNNVFIIG 666
+G + TI S E S ++V++ + F+T + +F++G
Sbjct: 186 VGELATIKSIEVKKSSVKNMVYLNEG----FSTIKDYMFVVG 223
>UniRef50_Q12ZT9 Cluster: Ribosomal protein S4E; n=1;
Methanococcoides burtonii DSM 6242|Rep: Ribosomal
protein S4E - Methanococcoides burtonii (strain DSM
6242)
Length = 236
Score = 104 bits (249), Expect = 3e-21
Identities = 64/221 (28%), Positives = 107/221 (48%)
Frame = +1
Query: 7 KRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRL 186
KR++ PK+W + K + GPH + +PL + LR+ L E +++ +
Sbjct: 6 KRISVPKSWQISKKSNKWITSTRPGPHNRLQSIPLAVILRDMLGVVDNRAEAKRVLSEGN 65
Query: 187 IKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRV 366
+ VDG R D +P G MD+++I N +R++ D K R ++++ A KLC+++
Sbjct: 66 VLVDGVARKDLRFPVGLMDIITIPLNNVEYRVMLDGKSRLVLNKLDGTGAD-KLCRIEGK 124
Query: 367 ATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNL 546
+ + + +DG I DSI L + K++ IK+E GNL MI GG +
Sbjct: 125 TSIKEGKIQMRLNDGVNI-IGSNNYNTKDSIILSVPDKKVVKHIKYEVGNLAMIVGGSHA 183
Query: 547 GRVGTIVSRERHPGSFDIVHIKDSTGHTFATRXNNVFIIGK 669
G VG+I S + + S F T + VF+IG+
Sbjct: 184 GEVGSIKEINTVKSSKNNT-VTISGEIEFETIEDYVFVIGE 223
>UniRef50_Q673R6 Cluster: Ribosomal protein S4; n=2; environmental
samples|Rep: Ribosomal protein S4 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 232
Score = 103 bits (247), Expect = 5e-21
Identities = 66/223 (29%), Positives = 107/223 (47%), Gaps = 2/223 (0%)
Frame = +1
Query: 4 LKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQR 183
+KRL P++W L + ++ +P+ G H C+PL + LR+ L A E +++ R
Sbjct: 6 MKRLTMPRSWPLTRKTDIWVQKPNPGGHSDEMCMPLGVILRDVLDLAHNLREAKRMLATR 65
Query: 184 LIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKR 363
+ VDG++ TD G MDV+++ + + FR I DV G+ I+ + A KLC+V
Sbjct: 66 QVLVDGRIETDLGRGVGLMDVLTVGE--DSFRCILDVNGKLRYRSISDKAAASKLCRVMG 123
Query: 364 VATGPKNVPYLVTHDGRTIRYPD-PLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGR 540
+T + HDGR I D L D++ + + + F G +TGG
Sbjct: 124 KSTITDGKTQIHLHDGRNILVSDAKLYDSGDTLVISLPDQSVAGHHPFSKGATAYLTGGS 183
Query: 541 NLGRVGTIVSRE-RHPGSFDIVHIKDSTGHTFATRXNNVFIIG 666
++G +VSR+ + + V D F T + VFIIG
Sbjct: 184 HIGITAKVVSRDIKRSSKPNEVQFPD-----FGTVADYVFIIG 221
>UniRef50_O05634 Cluster: 30S ribosomal protein S4e; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S4e -
Sulfolobus acidocaldarius
Length = 244
Score = 103 bits (246), Expect = 7e-21
Identities = 74/230 (32%), Positives = 107/230 (46%), Gaps = 8/230 (3%)
Frame = +1
Query: 4 LKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQR 183
+ R AP + K + R GPHK++E +PL I L+ LK T E +I+
Sbjct: 4 ITRFEAPWFLKVGKKEYKWIIRSRAGPHKIQESVPLAILLKYYLKAVDTTREAKRIIFDG 63
Query: 184 LIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKR 363
+ VDGKVR D YP G MDVV I + R+I D T I+ E+AKYK ++
Sbjct: 64 KVLVDGKVRRDYKYPVGLMDVVEIPSADLRVRIIPDNVRYLTTINISREDAKYKFVRIMN 123
Query: 364 VATGPKNVPYLVTHDGRTIRYP-DPLIKVN----DSIQLDIATTKIMDFIKFESGNLCMI 528
T V L DGR I + L + N ++++++ KI + G MI
Sbjct: 124 KTTLKSGVLQLNLEDGRNILLKGEELSQYNLPTLTTLKIELPEQKITTAYTIKEGVYAMI 183
Query: 529 TGGRNLGRVGTI--VSRERHPG-SFDIVHIKDSTGHTFATRXNNVFIIGK 669
GGRN G G I + ++ + +V ++ G TF T NV IG+
Sbjct: 184 IGGRNAGLHGKISKIQLAKYKRIKYSLVTLEGKDGSTFQTNLINVMAIGE 233
>UniRef50_P62429 Cluster: 30S ribosomal protein S4e; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S4e -
Nanoarchaeum equitans
Length = 234
Score = 98.3 bits (234), Expect = 2e-19
Identities = 58/189 (30%), Positives = 96/189 (50%), Gaps = 2/189 (1%)
Frame = +1
Query: 4 LKRLNAPKAWMLD-KLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQ 180
L+ L P+ W + K G + +PS GPH +P+ ++LR+ L A EV ++
Sbjct: 9 LRSLAVPRTWPVPRKSRGYWIVKPSPGPHSKEFAMPIAVWLRDYLGLAENMREVRYLLNN 68
Query: 181 RLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCK-V 357
+ VDG+ D +P G DV++I + NE +R++ D +G+ + +I EEA K K +
Sbjct: 69 GKVLVDGRPIKDYKFPVGLFDVLAIPEINEYYRVLLDERGKLYLKKIDKEEANIKYGKII 128
Query: 358 KRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGG 537
++V+ + Y +T DGRT D K + + +I KI + I E I G
Sbjct: 129 RKVSVRGGKIQYTLT-DGRTF-LGDNSYKTHYGVVYEIPNFKIREVIPLEKDRKAYIIRG 186
Query: 538 RNLGRVGTI 564
++ GR+G I
Sbjct: 187 KHTGRIGVI 195
>UniRef50_Q6L1B5 Cluster: 30S ribosomal protein S4e; n=1;
Picrophilus torridus|Rep: 30S ribosomal protein S4e -
Picrophilus torridus
Length = 234
Score = 95.9 bits (228), Expect = 1e-18
Identities = 71/231 (30%), Positives = 111/231 (48%), Gaps = 1/231 (0%)
Frame = +1
Query: 7 KRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRL 186
K + AP+ + + +A G HK +PL+I LR+ LK E+ +I+ L
Sbjct: 6 KIMMAPRKLKIARKSRFWAVNSLPGSHKKDSSIPLLIALRDYLKLGDKEREITRILTNSL 65
Query: 187 IKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRV 366
+ VDGKV + GFMD +++ + L + YD KG+ I E KL +VK
Sbjct: 66 VMVDGKVVKERRRGIGFMDTLTVSGNDYL--VSYDRKGKLVILPKPGETKGLKLLRVKGK 123
Query: 367 ATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNL 546
+ HDG T+ IK DS+ + I +I+D +KF GN ITGG ++
Sbjct: 124 TYVKGGRIQISFHDGSTMVTDRKDIKNGDSVLVKIPKKEIVDVLKFAPGNRVFITGGSHV 183
Query: 547 GRVGTIVSRE-RHPGSFDIVHIKDSTGHTFATRXNNVFIIGKGTKAYISLP 696
G + TI S E + ++VH+ + F+T + VF++G K S+P
Sbjct: 184 GEIATIKSIEIKSSSGENMVHMNEG----FSTVSSYVFVMG-SPKYTFSMP 229
>UniRef50_A2SPL4 Cluster: Ribosomal protein S4E, central; n=1;
Methanocorpusculum labreanum Z|Rep: Ribosomal protein
S4E, central - Methanocorpusculum labreanum (strain ATCC
43576 / DSM 4855 / Z)
Length = 239
Score = 93.5 bits (222), Expect = 6e-18
Identities = 63/224 (28%), Positives = 108/224 (48%), Gaps = 4/224 (1%)
Frame = +1
Query: 7 KRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRL 186
KR+ AP AW + + Y S+GPH LP+ I+LR+ +++AL EV KI+ R
Sbjct: 5 KRMTAPDAWQIARKESKYVVSTSSGPHD-GSALPIGIWLRDHMQFALNTKEVRKILHDRQ 63
Query: 187 IKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRV 366
+ ++G + TD D++S K ++ + ++ D KGR + I+ + AK +L KV
Sbjct: 64 VLLNGHIVTDEHIGIDVFDIISFPKIDKHYMILVDEKGRHNEYEISADAAKLQLVKVANK 123
Query: 367 ATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIA---TTKIMDFIKFESGNLCMITGG 537
T + G + K DS+ + IA + + GN+ +I GG
Sbjct: 124 TTIKGGKTQINLTSGANF-IGEENCKGKDSLVIGIAGDDRFAVQQHFPYAVGNMAIIIGG 182
Query: 538 RNLGRVGTIVSRERHPGSF-DIVHIKDSTGHTFATRXNNVFIIG 666
++ + G +V S + V I+D+ G+ F T + V++IG
Sbjct: 183 QHTMKTGKLVEILVQESSLPNRVIIEDADGNKFETIEDYVYMIG 226
>UniRef50_Q00TF1 Cluster: Chromosome 17 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 17 contig 1, DNA
sequence - Ostreococcus tauri
Length = 197
Score = 89.0 bits (211), Expect = 1e-16
Identities = 58/167 (34%), Positives = 87/167 (52%)
Frame = -1
Query: 741 LVPLLXDGEANALAARQRDVRLRALADYEHVVXPRGEGVSRGVLDVHNVEGAGMSLAGHD 562
L+ + DGE + LA +RD RL A D EHV R + ++ GVL VHN EG + LA D
Sbjct: 27 LLLFVDDGELDTLALGKRDHRLVARTDGEHVRRARRKLLTGGVLQVHNFEGTDVLLAALD 86
Query: 561 GAHTPQVTASRDHTQVPRLKLDEVHNLRSCDV*LDGIVDFDKWVWVADGAAIMRYQVRNI 382
V + DH Q ++LD + +L DV +G+ D + V +GAA+++ R+
Sbjct: 87 HPDATGVVTTGDHAQSADVELDRIGDLVRRDVDHNGVTLLDHGIRVTNGAAVVQTDARHA 146
Query: 381 LRSGRHTLDFTQLVLSLLRGDTVDCESALNIID*TKQFISLLN*DNI 241
L QLVL D V ES+L ++D + FI+L + D++
Sbjct: 147 LVPELLAPHLAQLVLRFDSLDAVHNESSLGVVDEPEVFIALFDGDDV 193
>UniRef50_P22510 Cluster: 30S ribosomal protein S4E; n=6;
Halobacteriaceae|Rep: 30S ribosomal protein S4E -
Haloarcula marismortui (Halobacterium marismortui)
Length = 234
Score = 85.8 bits (203), Expect = 1e-15
Identities = 59/221 (26%), Positives = 97/221 (43%), Gaps = 2/221 (0%)
Frame = +1
Query: 7 KRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRL 186
KRL+ P +W +++ + + GPH +PL+I LR+ L YA E + +
Sbjct: 6 KRLSVPNSWPVERKTATFTVKAGAGPHG-ESGVPLLIVLRDVLGYADNRKEARYALNEDN 64
Query: 187 IKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRV 366
+ ++GK +D P G D+++ + E +R+ GR + I P+ A+ KL K+
Sbjct: 65 VLINGKAISDEERPVGMFDILAFTEREEYYRVFPGEGGRLALTAIDPDAAQSKLGKIVTK 124
Query: 367 ATGPKNVPYLVTHDGRT-IRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRN 543
L HDG T I D DSI + +++ ++E G L G +
Sbjct: 125 THVSGGDVQLGLHDGETLIVEDDQTYDAGDSIVVGNEDGEVVAHFEYEEGALVTAVDGAH 184
Query: 544 LGRVGTIVSRERHPGSF-DIVHIKDSTGHTFATRXNNVFII 663
G VG + + PGS + V + G F T V +I
Sbjct: 185 AGEVGEVEEIQVTPGSAQNNVIVSQDEGEGFETVEEYVVVI 225
>UniRef50_A0RVY5 Cluster: Ribosomal protein S4E; n=2;
Thermoprotei|Rep: Ribosomal protein S4E - Cenarchaeum
symbiosum
Length = 238
Score = 82.6 bits (195), Expect = 1e-14
Identities = 52/187 (27%), Positives = 82/187 (43%)
Frame = +1
Query: 4 LKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQR 183
LKR AP W + + G + G H +P + LR+ L T E K +
Sbjct: 10 LKRQMAPSFWGITRKGKRFVVTVHPGAHSKHRSIPSAVLLRDTLGAVSTLREAKKSIYSG 69
Query: 184 LIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKR 363
++VDG RT + G MDVV + T +++R++ +I E K+C+V
Sbjct: 70 NVEVDGVKRTSLHHGIGLMDVVELGGTGDIYRMVPSGGAILKPVKIEAAEKDRKICRVTS 129
Query: 364 VATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRN 543
+ + HDGR++ D + V DS + + KI+ + E G ++T G N
Sbjct: 130 KTSISGGRTQIGFHDGRSL-ISDEKVSVGDSCLVQVPGQKILKVARMEKGAHAVVTRGTN 188
Query: 544 LGRVGTI 564
G GTI
Sbjct: 189 AGSTGTI 195
>UniRef50_A5BV74 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 186
Score = 53.6 bits (123), Expect = 6e-06
Identities = 29/89 (32%), Positives = 48/89 (53%)
Frame = -1
Query: 756 LGCDALVPLLXDGEANALAARQRDVRLRALADYEHVVXPRGEGVSRGVLDVHNVEGAGMS 577
LGC L+ L D + + L R+R RL LA+ EH+ + + G+L+V ++G +
Sbjct: 88 LGCKPLLGLFDDRQLDXLTLRKRYPRLCPLANDEHIAQTSCKFMPSGILNVDGLKGPLVL 147
Query: 576 LAGHDGAHTPQVTASRDHTQVPRLKLDEV 490
L D ++T V ++ H +P +K DEV
Sbjct: 148 LPVLDDSNTAPVPSTSHHDNIPNIKFDEV 176
>UniRef50_A6PQ76 Cluster: Putative uncharacterized protein; n=1;
Victivallis vadensis ATCC BAA-548|Rep: Putative
uncharacterized protein - Victivallis vadensis ATCC
BAA-548
Length = 762
Score = 42.7 bits (96), Expect = 0.011
Identities = 29/78 (37%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Frame = +3
Query: 558 HHRVP-RETSRLLRHCAHQGL-HGTHLRHEXEQRVHNRQGHEGVHLAAARQGHSPHHRRG 731
H VP R + RH A Q H H R EQR R+G L GH H +
Sbjct: 112 HDPVPQRRLAGRRRHRAQQPRRHHRHQRDRGEQRAAQRKGDHRRKLLEHHAGHPLHEEQ- 170
Query: 732 AGQAHRNQGRRAXGVKGH 785
Q HR +G+RA G +GH
Sbjct: 171 -RQEHRQRGQRAGGQRGH 187
>UniRef50_A0BHK0 Cluster: Chromosome undetermined scaffold_108,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_108,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 246
Score = 40.3 bits (90), Expect = 0.057
Identities = 25/76 (32%), Positives = 42/76 (55%)
Frame = +1
Query: 73 STGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVS 252
+T P +L + + L + ++ K L E L I KQ+ +KV+ K + DPT+P D S
Sbjct: 100 NTQPRELLKVVNLDPKIMDKEKKKL--EEELDINKQQKVKVEHKKQLDPTFPRNDFDKFS 157
Query: 253 IEKTNELFRLIYDVKG 300
IE +++ L+ + KG
Sbjct: 158 IEDMDQVLNLLSNYKG 173
>UniRef50_A6WAT7 Cluster: Putative uncharacterized protein; n=1;
Kineococcus radiotolerans SRS30216|Rep: Putative
uncharacterized protein - Kineococcus radiotolerans
SRS30216
Length = 189
Score = 39.1 bits (87), Expect = 0.13
Identities = 23/66 (34%), Positives = 25/66 (37%), Gaps = 1/66 (1%)
Frame = -3
Query: 748 RCACPAPRRW*GECPCRAAARCTPSCPCRL*TRC-SXSWRRCVPWSP*CAQCRRSRDVSR 572
RC P R CP R ARC CP R RC + RC P RR R +
Sbjct: 10 RCPARCPARCPARCPARCPARCPARCPARCPARCPARCPARCPAHCPNNGAARRWRPAAA 69
Query: 571 GTRWCP 554
R P
Sbjct: 70 ARRARP 75
Score = 34.7 bits (76), Expect = 2.8
Identities = 23/67 (34%), Positives = 25/67 (37%), Gaps = 1/67 (1%)
Frame = -3
Query: 745 CACPAPRRW*GECPCRAAARCTPSCPCRL*TRCSXSWRRCVPWSP*CAQC-RRSRDVSRG 569
C P R CP R ARC CP R RC RC P A+C +
Sbjct: 7 CFARCPARCPARCPARCPARCPARCPARCPARCP---ARCPARCP--ARCPAHCPNNGAA 61
Query: 568 TRWCPHA 548
RW P A
Sbjct: 62 RRWRPAA 68
>UniRef50_Q9KI91 Cluster: VrrB; n=17; Bacteria|Rep: VrrB - Bacillus
anthracis
Length = 265
Score = 37.9 bits (84), Expect = 0.30
Identities = 19/63 (30%), Positives = 22/63 (34%)
Frame = +3
Query: 597 HCAHQGLHGTHLRHEXEQRVHNRQGHEGVHLAAARQGHSPHHRRGAGQAHRNQGRRAXGV 776
H HQG HG H H + GH G H GH HH H ++
Sbjct: 116 HHHHQGHHGHHGHHHHQ----GHHGHHGHHHHQGHHGHQGHHHHQGHHGHHGHHQQQVHH 171
Query: 777 KGH 785
GH
Sbjct: 172 HGH 174
Score = 35.5 bits (78), Expect = 1.6
Identities = 25/100 (25%), Positives = 34/100 (34%)
Frame = +3
Query: 456 HPVRHRNYEDYGLHQV*VWELVYDHGRP*LGACGHHRVPRETSRLLRHCAHQGLHGTHLR 635
H H + + HQ + H + G GHH H HG H
Sbjct: 118 HHQGHHGHHGHHHHQGHHGHHGHHHHQGHHGHQGHHHHQGHHGHHGHHQQQVHHHGHHHI 177
Query: 636 HEXEQRVHNRQGHEGVHLAAARQGHSPHHRRGAGQAHRNQ 755
H QGH+G H GH HH + + Q ++Q
Sbjct: 178 HPQAILYQTHQGHQGHHDHHGHHGHQGHHGQHSQQHQQHQ 217
Score = 33.1 bits (72), Expect = 8.6
Identities = 20/61 (32%), Positives = 22/61 (36%), Gaps = 1/61 (1%)
Frame = +3
Query: 606 HQGLHGTHLRHEXEQRVHNRQGHEGVHLAAARQGHSPHHRRGAGQAHR-NQGRRAXGVKG 782
H G H H H H+ QGH G H QGH H Q H + G V
Sbjct: 113 HHG-HHHHQGHHGHHGHHHHQGHHGHHGHHHHQGHHGHQGHHHHQGHHGHHGHHQQQVHH 171
Query: 783 H 785
H
Sbjct: 172 H 172
>UniRef50_Q9KI83 Cluster: VrrB; n=9; Bacillus cereus group|Rep: VrrB
- Bacillus anthracis
Length = 115
Score = 37.9 bits (84), Expect = 0.30
Identities = 20/52 (38%), Positives = 22/52 (42%)
Frame = +3
Query: 597 HCAHQGLHGTHLRHEXEQRVHNRQGHEGVHLAAARQGHSPHHRRGAGQAHRN 752
H HQG H H Q H+ QGH G H QGH HH Q H +
Sbjct: 14 HHHHQG----HQGHHGHQGHHHHQGHHGHHGHHHHQGHHGHHGHHQQQVHHH 61
Score = 34.7 bits (76), Expect = 2.8
Identities = 17/59 (28%), Positives = 21/59 (35%)
Frame = +3
Query: 609 QGLHGTHLRHEXEQRVHNRQGHEGVHLAAARQGHSPHHRRGAGQAHRNQGRRAXGVKGH 785
Q +HG H H Q GH+G H GH HH H ++ GH
Sbjct: 6 QVIHGHH-GHHHHQGHQGHHGHQGHHHHQGHHGHHGHHHHQGHHGHHGHHQQQVHHHGH 63
>UniRef50_A0GGU8 Cluster: Putative uncharacterized protein; n=1;
Burkholderia phytofirmans PsJN|Rep: Putative
uncharacterized protein - Burkholderia phytofirmans PsJN
Length = 753
Score = 37.9 bits (84), Expect = 0.30
Identities = 22/77 (28%), Positives = 29/77 (37%)
Frame = +3
Query: 555 GHHRVPRETSRLLRHCAHQGLHGTHLRHEXEQRVHNRQGHEGVHLAAARQGHSPHHRRGA 734
G R R H H H H RH ++ H+R H+ R GH H R
Sbjct: 509 GRRRRDRHRRDHRHHDRHHRDHRHHDRHHRDRHRHDRHRHDRRLHDRHRHGHHRHGHRLR 568
Query: 735 GQAHRNQGRRAXGVKGH 785
G H ++ R G+ H
Sbjct: 569 GHRHHDRRPRGHGLHRH 585
Score = 35.1 bits (77), Expect = 2.1
Identities = 27/70 (38%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = +3
Query: 558 HHRVPRETSRLLRHCAHQGLHGTHLRHEXEQRVHNRQGHEGVHLAAAR-QGHSPHHRRGA 734
HHR R R H H+ H H RH ++R+H+R H G H R +GH H RR
Sbjct: 526 HHRDHRHHDR---H--HRDRH-RHDRHRHDRRLHDRHRH-GHHRHGHRLRGHRHHDRRPR 578
Query: 735 GQA-HRNQGR 761
G HR+ R
Sbjct: 579 GHGLHRHDRR 588
>UniRef50_UPI000038E364 Cluster: hypothetical protein Faci_03000514;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03000514 - Ferroplasma acidarmanus fer1
Length = 317
Score = 37.5 bits (83), Expect = 0.40
Identities = 21/63 (33%), Positives = 32/63 (50%)
Frame = -1
Query: 273 QFISLLN*DNIHKSSRISRVSPNFPINLYEALFHNFQDFVSGQSILQTIPQENHQGQALA 94
Q I+ N +NI + I + N P E LFH F DFVSG ++ I + + + +A
Sbjct: 50 QVINTYNDENILEIINIPDIKYNIPDAEKEILFHKFIDFVSGNKLISGIMKIMYLDRKIA 109
Query: 93 QLV 85
Q +
Sbjct: 110 QFI 112
>UniRef50_Q2VZ09 Cluster: Predicted SAM-dependent methyltransferase;
n=4; Rhodospirillaceae|Rep: Predicted SAM-dependent
methyltransferase - Magnetospirillum magneticum (strain
AMB-1 / ATCC 700264)
Length = 820
Score = 37.5 bits (83), Expect = 0.40
Identities = 22/52 (42%), Positives = 26/52 (50%)
Frame = +3
Query: 606 HQGLHGTHLRHEXEQRVHNRQGHEGVHLAAARQGHSPHHRRGAGQAHRNQGR 761
H+G TH R + RQGH+ V AA R GH HHR G Q R G+
Sbjct: 24 HRGDQETHDRIGPQLVPGTRQGHQAVDHAAPR-GHPQHHREGHAQGLRPIGQ 74
>UniRef50_Q1B492 Cluster: LigA; n=1; Mycobacterium sp. MCS|Rep: LigA
- Mycobacterium sp. (strain MCS)
Length = 634
Score = 37.1 bits (82), Expect = 0.53
Identities = 30/78 (38%), Positives = 35/78 (44%), Gaps = 8/78 (10%)
Frame = +3
Query: 558 HHRVPRETSRLLRHCAHQGLHGTHLRHEXEQRV----HNRQGHEGVHLAAARQGHSPH-- 719
HHR +R RH H G R E+R+ H R H HL AAR H
Sbjct: 267 HHRPTATPARQHRHRPHVD-SGDRRRPPRERRLVLPRHGRTAHAD-HLPAARFPRQRHDV 324
Query: 720 --HRRGAGQAHRNQGRRA 767
HRR G+AH+ GRRA
Sbjct: 325 QPHRRLPGRAHQQCGRRA 342
>UniRef50_Q8BY81 Cluster: 3 days neonate thymus cDNA, RIKEN
full-length enriched library, clone:A630024D08
product:hypothetical Histidine-rich region containing
protein, full insert sequence; n=1; Mus musculus|Rep: 3
days neonate thymus cDNA, RIKEN full-length enriched
library, clone:A630024D08 product:hypothetical
Histidine-rich region containing protein, full insert
sequence - Mus musculus (Mouse)
Length = 139
Score = 36.7 bits (81), Expect = 0.70
Identities = 28/77 (36%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Frame = +3
Query: 552 CGHHRVPRETSR-LLRHCAHQGLHGTHLRHEXEQRVHNRQGHEGVHLAAARQGHSPHHRR 728
C HH R LLR + G H RH +R H RQ EGV R+GH HH
Sbjct: 55 CAHHLSADPAERVLLRGVSPPGEALGHQRHY--ERQHVRQHVEGVGQHGERRGHPAHHHL 112
Query: 729 GAGQAHRNQGRRAXGVK 779
Q H ++G G K
Sbjct: 113 ---QHHEHEGIMKMGPK 126
>UniRef50_Q17LX3 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 450
Score = 36.3 bits (80), Expect = 0.92
Identities = 16/54 (29%), Positives = 24/54 (44%)
Frame = +3
Query: 606 HQGLHGTHLRHEXEQRVHNRQGHEGVHLAAARQGHSPHHRRGAGQAHRNQGRRA 767
H G+ H H +Q+ H+ GH H + G PHHR + GR++
Sbjct: 287 HPGMEHHHHPHHHQQQHHSSHGHPAQHQGSG--GKQPHHRNNDSFNRNSSGRKS 338
>UniRef50_A5K5R6 Cluster: RAD protein; n=1; Plasmodium vivax|Rep:
RAD protein - Plasmodium vivax
Length = 413
Score = 36.3 bits (80), Expect = 0.92
Identities = 21/82 (25%), Positives = 31/82 (37%), Gaps = 2/82 (2%)
Frame = +3
Query: 507 VWELVYDHGRP*LGACGHHRVPRETSRLLRHCAHQGLHGTHLRHEXEQRVHNRQ--GHEG 680
+W + YD G G+ G + H H+ H +H+ H + H R GHE
Sbjct: 290 MWIVKYDQGGRGGGSGGGGHDKHKHKHKHGHHRHENHHHSHVHHSHDHHSHGRDNHGHEN 349
Query: 681 VHLAAARQGHSPHHRRGAGQAH 746
H + HS H + H
Sbjct: 350 HHHSHDHHSHSHDHHTHSHDNH 371
>UniRef50_A0VC89 Cluster: Putative uncharacterized protein; n=1;
Delftia acidovorans SPH-1|Rep: Putative uncharacterized
protein - Delftia acidovorans SPH-1
Length = 511
Score = 35.9 bits (79), Expect = 1.2
Identities = 34/89 (38%), Positives = 38/89 (42%), Gaps = 17/89 (19%)
Frame = +3
Query: 531 GRP*LGA--CGHHRVPRETSRLLRHCAHQ-G----LHGTHLRHEXEQRVHNRQ----GHE 677
GR LG GHHR H HQ G LH +R QRV + Q +
Sbjct: 82 GRTHLGREQLGHHRAEHAEEHGHEHADHQLGDQQLLHRGAVRQPGIQRVEHHQVADQRAD 141
Query: 678 GVHLAA--ARQG----HSPHHRRGAGQAH 746
G H AA RQG H HH+RGAG H
Sbjct: 142 GQHAAAHAVRQGAEERHDHHHQRGAGHLH 170
>UniRef50_A7ATI1 Cluster: Putative uncharacterized protein; n=1;
Babesia bovis|Rep: Putative uncharacterized protein -
Babesia bovis
Length = 546
Score = 35.9 bits (79), Expect = 1.2
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 3/35 (8%)
Frame = +3
Query: 639 EXEQRVHNRQ---GHEGVHLAAARQGHSPHHRRGA 734
E Q+VH R+ G E +HL + H PHHR+GA
Sbjct: 441 EYVQKVHEREMKSGEEAIHLPNSGTHHPPHHRKGA 475
>UniRef50_UPI0000DB6DB9 Cluster: PREDICTED: hypothetical protein;
n=1; Apis mellifera|Rep: PREDICTED: hypothetical protein
- Apis mellifera
Length = 444
Score = 35.5 bits (78), Expect = 1.6
Identities = 18/67 (26%), Positives = 27/67 (40%), Gaps = 2/67 (2%)
Frame = +3
Query: 558 HHRVPRETSRLLRHCAHQGLHGTHLRHEXEQRVHNRQGHEGVHLAAARQG--HSPHHRRG 731
HH E H H+ H +H E + ++ GHE H +G H HH+
Sbjct: 278 HHHGHHEDHHHSHHQDHKHHHHEEHKHGHEHKEEHKHGHEHKHHHDHHEGHHHHEHHKHH 337
Query: 732 AGQAHRN 752
A H++
Sbjct: 338 ASHEHKH 344
Score = 34.3 bits (75), Expect = 3.7
Identities = 18/72 (25%), Positives = 27/72 (37%)
Frame = +3
Query: 558 HHRVPRETSRLLRHCAHQGLHGTHLRHEXEQRVHNRQGHEGVHLAAARQGHSPHHRRGAG 737
HH E + H H+ HG +H ++ H+ GH H + Q H HH
Sbjct: 246 HHHGHHEDHKHSHHEEHEHKHGHEHKHGHKEEHHH--GHHEDHHHSHHQDHKHHHHEEHK 303
Query: 738 QAHRNQGRRAXG 773
H ++ G
Sbjct: 304 HGHEHKEEHKHG 315
Score = 33.5 bits (73), Expect = 6.5
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +3
Query: 597 HCAHQGLHGTHLRHEXEQRVHNRQGHEGVHLAAARQGHSPHHRRGAGQAHRN 752
H AH H H +H E + H+ Q H H + GH H G + H++
Sbjct: 207 HHAHHQDH--HHKHGHEHKHHHHQDHRHKHGHEHKHGHHEEHHHGHHEDHKH 256
>UniRef50_Q7REV3 Cluster: Drosophila melanogaster CG8797 gene
product-related; n=8; Eukaryota|Rep: Drosophila
melanogaster CG8797 gene product-related - Plasmodium
yoelii yoelii
Length = 2198
Score = 35.5 bits (78), Expect = 1.6
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +3
Query: 609 QGLHGTHLRHEXEQRVHNRQGHEGVHLAAARQGHSPHHRRGAGQAHRNQGRRAXGVKGH 785
QG G H++H+ E ++QGH +QG +G GQ + Q + +GH
Sbjct: 1207 QGQQGAHVQHQQEAHRQHQQGHGQQQGQGQQQGQGQQQGQGQGQQGQGQQQGHGQQQGH 1265
>UniRef50_Q0UL67 Cluster: Predicted protein; n=1; Phaeosphaeria
nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
(Septoria nodorum)
Length = 648
Score = 35.5 bits (78), Expect = 1.6
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +3
Query: 633 RHEXEQRVHNRQGHEGVHLAAARQ-GHSPHHRRGAGQAHRNQGRR 764
R E E+R ++ G + +R+ GH HHR G+G+ HR+ RR
Sbjct: 60 RREKERRKREKRRMAGRSRSGSRERGHRRHHRGGSGERHRDGRRR 104
>UniRef50_UPI00006A1FE8 Cluster: Coiled-coil domain-containing protein
35; n=1; Xenopus tropicalis|Rep: Coiled-coil
domain-containing protein 35 - Xenopus tropicalis
Length = 957
Score = 35.1 bits (77), Expect = 2.1
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +3
Query: 588 LLRHCAHQGLHGTHLRHEXEQRVHNRQGHEGVHLAAARQGHSPHHRR 728
LLRHC + T L++ Q V +++ HE + Q ++PHH R
Sbjct: 893 LLRHCGPEASSETELQNTGPQVVASQKTHEKLDNLPTDQANTPHHHR 939
>UniRef50_UPI0000DB7528 Cluster: PREDICTED: similar to Homeobox
protein araucan; n=1; Apis mellifera|Rep: PREDICTED:
similar to Homeobox protein araucan - Apis mellifera
Length = 677
Score = 34.7 bits (76), Expect = 2.8
Identities = 16/53 (30%), Positives = 21/53 (39%)
Frame = +3
Query: 624 THLRHEXEQRVHNRQGHEGVHLAAARQGHSPHHRRGAGQAHRNQGRRAXGVKG 782
TH H+ +H+ Q H G +Q H HH G H +Q G G
Sbjct: 429 THPHHQQYHHLHHHQQHYGQQQQQQQQQHQHHHMPSQGHHHHSQQPWLGGAGG 481
>UniRef50_A7DCW8 Cluster: Dihydropteroate synthase; n=5;
Alphaproteobacteria|Rep: Dihydropteroate synthase -
Methylobacterium extorquens PA1
Length = 410
Score = 34.7 bits (76), Expect = 2.8
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = -3
Query: 784 WPLTPXARRPWLRCACPAPRRW*GECPCRAAARCTPSCPC 665
WP T R W P+ R W CP A R PSC C
Sbjct: 11 WPPTGRPARRWRNALAPSTR-WRRSCPMTATFRPRPSCRC 49
>UniRef50_A5WHY9 Cluster: TonB-dependent receptor; n=1;
Psychrobacter sp. PRwf-1|Rep: TonB-dependent receptor -
Psychrobacter sp. PRwf-1
Length = 836
Score = 34.7 bits (76), Expect = 2.8
Identities = 18/62 (29%), Positives = 21/62 (33%)
Frame = +3
Query: 561 HRVPRETSRLLRHCAHQGLHGTHLRHEXEQRVHNRQGHEGVHLAAARQGHSPHHRRGAGQ 740
HR+ R T L H H H H+ E+ H GHE GH H
Sbjct: 314 HRINRLTCGLDEHEHGAHEHHDHEEHDHEEHEHEEHGHEAHEHGHEEHGHQEHEHEHDEH 373
Query: 741 AH 746
H
Sbjct: 374 EH 375
>UniRef50_A5NYF9 Cluster: 3-isopropylmalate dehydratase, small
subunit; n=2; Alphaproteobacteria|Rep: 3-isopropylmalate
dehydratase, small subunit - Methylobacterium sp. 4-46
Length = 543
Score = 34.7 bits (76), Expect = 2.8
Identities = 23/63 (36%), Positives = 28/63 (44%)
Frame = +3
Query: 597 HCAHQGLHGTHLRHEXEQRVHNRQGHEGVHLAAARQGHSPHHRRGAGQAHRNQGRRAXGV 776
H +GL G LR + R R GH G LAA Q + HRR A + QGR
Sbjct: 6 HLDPRGLRGARLRDRGD-RGRARAGHPGA-LAAPAQDPARDHRRDARRPRHRQGRHPGHH 63
Query: 777 KGH 785
+ H
Sbjct: 64 RPH 66
>UniRef50_A5BNN8 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 906
Score = 34.7 bits (76), Expect = 2.8
Identities = 32/103 (31%), Positives = 44/103 (42%)
Frame = -2
Query: 539 RPPVIIHKFPDSNLMKSIIFVVAMSNWMESLTLISGSG*RMVRPSCVTKYGTFLGPVATR 360
RPP H SN + S + A S +S+TLI +R T TF+ VA
Sbjct: 298 RPPRTAHIAQSSNPLLSRLDSTASST-SQSITLIGSDYDAYLRYQAATS--TFVASVAQT 354
Query: 359 LTLHNLYLASSGVIRWIVNLPLTS*IRRNSSLVFSIETTSINP 231
+ + SS + WI++ + I N L SI TTS P
Sbjct: 355 DNVSVCFTQSSSLGPWILDSGASDHISGNKHLFSSITTTSALP 397
>UniRef50_UPI00015B58DA Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 265
Score = 34.3 bits (75), Expect = 3.7
Identities = 16/60 (26%), Positives = 25/60 (41%)
Frame = +3
Query: 606 HQGLHGTHLRHEXEQRVHNRQGHEGVHLAAARQGHSPHHRRGAGQAHRNQGRRAXGVKGH 785
H+ G H H+ + H + GHE ++ H H G Q H+++G G H
Sbjct: 180 HEKNGGHHEHHDHHKGGHEKAGHEHAGKHEEKKAHRKEHHHGHHQ-HKHKGHEEKGEHSH 238
>UniRef50_UPI0000E814A8 Cluster: PREDICTED: similar to MEGF6; n=1;
Gallus gallus|Rep: PREDICTED: similar to MEGF6 - Gallus
gallus
Length = 1119
Score = 34.3 bits (75), Expect = 3.7
Identities = 23/52 (44%), Positives = 25/52 (48%), Gaps = 5/52 (9%)
Frame = -3
Query: 673 CPCRL*TRCSXSWRRCVPWSP*CAQ----CRR-SRDVSRGTRWCPHAPSYGL 533
C CR R RRC PWSP CAQ C + RDV +G C P Y L
Sbjct: 144 CRCRRQYRLREDGRRCAPWSP-CAQRNGGCMQLCRDV-QGAARCECRPGYRL 193
>UniRef50_UPI000023E82F Cluster: hypothetical protein FG01599.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG01599.1 - Gibberella zeae PH-1
Length = 1347
Score = 34.3 bits (75), Expect = 3.7
Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Frame = +3
Query: 573 RETSRLLRHCAHQGLHGTHLRHEXEQRVHNRQGHEGVHLAAARQ--GHSPHHRRGAGQAH 746
+E + RH H H H H+ E + ++ GH HL H HH G G H
Sbjct: 236 KEKEKEFRH-EHHHKHHHHHGHQHEHKHGHKHGHLHGHLHKEHHYNHHDKHHGYGKGHEH 294
Query: 747 RNQG 758
++ G
Sbjct: 295 KHYG 298
>UniRef50_A7CME0 Cluster: Putative uncharacterized protein
precursor; n=1; Ralstonia pickettii 12D|Rep: Putative
uncharacterized protein precursor - Ralstonia pickettii
12D
Length = 533
Score = 34.3 bits (75), Expect = 3.7
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = +3
Query: 531 GRP*LGACGHHRVPRETSRLLRHCAHQGLHGTHLRHEXEQ-RVHNRQGHEG-VHLAAARQ 704
G+P + A HRV +E + R H+ + H+ EQ RVH R G EG + A Q
Sbjct: 317 GKPAVQALEAHRVDQERADRRRDAPHRNVQRFHVDARAEQERVHQRDGAEGHEDVFAEEQ 376
Query: 705 GH 710
H
Sbjct: 377 AH 378
>UniRef50_A6GEF6 Cluster: Hydrolase, alpha/beta fold family protein;
n=1; Plesiocystis pacifica SIR-1|Rep: Hydrolase,
alpha/beta fold family protein - Plesiocystis pacifica
SIR-1
Length = 310
Score = 33.9 bits (74), Expect = 4.9
Identities = 22/91 (24%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Frame = +1
Query: 31 WMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVR 210
W +D LGG+ K+R LP+ +F ++ G V +V + ++ G R
Sbjct: 216 WWVDFLGGLIELGDDAKLRKIRADLPIYVFAGDQDPVGAQGKNVRALVDR--LRATGHAR 273
Query: 211 TDPT-YPAGFMDVVSIEKTNELFRLIYDVKG 300
T YP G ++++ + +++ R + D G
Sbjct: 274 VKQTLYPGGRHEMINERERDQVTRELIDWLG 304
>UniRef50_Q93VS6 Cluster: At1g67870/T23K23_28; n=2; Arabidopsis
thaliana|Rep: At1g67870/T23K23_28 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 279
Score = 33.9 bits (74), Expect = 4.9
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Frame = +3
Query: 606 HQGLHGTHLRHEXEQRVHNRQGH----EGVHLAAARQGHSPHHRRGAGQAHRN 752
HQG+HG ++H+ + ++ GH +G+H + GH H+ G G H++
Sbjct: 154 HQGMHG--MQHQGGHGMQHQGGHGMQHQGMHGMQHQGGHGMEHQGGHGMQHQD 204
>UniRef50_UPI00015B8DDD Cluster: UPI00015B8DDD related cluster; n=1;
unknown|Rep: UPI00015B8DDD UniRef100 entry - unknown
Length = 498
Score = 33.5 bits (73), Expect = 6.5
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = +3
Query: 696 ARQGHSPHHRRGAGQAHRNQGRRAXGVKGH 785
ARQG + HHRR G AHR++G A +GH
Sbjct: 377 ARQGGA-HHRRAHGPAHRDEGPAARLFEGH 405
>UniRef50_Q6RVG3 Cluster: Na-driven Cl-HCO3 exchanger NDCBE1-A; n=2;
Rattus norvegicus|Rep: Na-driven Cl-HCO3 exchanger
NDCBE1-A - Rattus norvegicus (Rat)
Length = 1037
Score = 33.5 bits (73), Expect = 6.5
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +3
Query: 627 HLRHEXEQRVHNRQGHEGVHLAAARQGHSPHHRRGAGQAHRNQGRRAXG 773
++ +E E+ +R + GV + RQ H H R GQ HR +G R G
Sbjct: 33 NIHYEKEELEGHRTLYVGVRMPLGRQSH--RHHRTHGQKHRRRGGRGKG 79
>UniRef50_Q6RVG2 Cluster: Na-driven Cl-HCO3 exchanger NDCBE1-B; n=2;
Rattus norvegicus|Rep: Na-driven Cl-HCO3 exchanger
NDCBE1-B - Rattus norvegicus (Rat)
Length = 1067
Score = 33.5 bits (73), Expect = 6.5
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +3
Query: 627 HLRHEXEQRVHNRQGHEGVHLAAARQGHSPHHRRGAGQAHRNQGRRAXG 773
++ +E E+ +R + GV + RQ H H R GQ HR +G R G
Sbjct: 33 NIHYEKEELEGHRTLYVGVRMPLGRQSH--RHHRTHGQKHRRRGGRGKG 79
>UniRef50_Q3JXY9 Cluster: Putative uncharacterized protein; n=5;
Burkholderia|Rep: Putative uncharacterized protein -
Burkholderia pseudomallei (strain 1710b)
Length = 915
Score = 33.5 bits (73), Expect = 6.5
Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 5/65 (7%)
Frame = +3
Query: 606 HQGLHGTHLRHEX--EQRVHNRQGHEGVHLAAARQGHSPHHRRGAGQA---HRNQGRRAX 770
H+ H H R E R+H + + +H A R+ PH RR Q R+ GR
Sbjct: 167 HRHPHRAHPRDRETDEHRLHGERERDVLHEHAMRRARQPHERRDLAQVVVHQRDVGRLDR 226
Query: 771 GVKGH 785
G+ H
Sbjct: 227 GIGAH 231
>UniRef50_A7DKA7 Cluster: Putative uncharacterized protein; n=1;
Methylobacterium extorquens PA1|Rep: Putative
uncharacterized protein - Methylobacterium extorquens
PA1
Length = 476
Score = 33.5 bits (73), Expect = 6.5
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = +3
Query: 696 ARQGHSPHHRRGAGQAHRNQGRRAXGVKGH 785
ARQG PHHRR AHR++G A +GH
Sbjct: 289 ARQGR-PHHRRAHRPAHRDEGPAARLFEGH 317
>UniRef50_Q5QMN1 Cluster: Putative uncharacterized protein
P0419B01.9; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0419B01.9 - Oryza sativa subsp. japonica (Rice)
Length = 123
Score = 33.5 bits (73), Expect = 6.5
Identities = 29/67 (43%), Positives = 30/67 (44%), Gaps = 14/67 (20%)
Frame = -3
Query: 706 PC-RAAARCTPSC---PCRL*TR-------CSXSWRRCV-PWSP*CAQ--CRRSRDVSRG 569
PC RAAA C P C PCR R C + CV P SP CA CRR R R
Sbjct: 41 PCVRAAAPCVPPCTSRPCRRPRRHLRPPSACVRAAALCVPPSSPPCASRPCRRPRHRLRP 100
Query: 568 TRWCPHA 548
C HA
Sbjct: 101 PAACVHA 107
>UniRef50_Q57ZF4 Cluster: Putative uncharacterized protein; n=1;
Trypanosoma brucei|Rep: Putative uncharacterized protein
- Trypanosoma brucei
Length = 516
Score = 33.5 bits (73), Expect = 6.5
Identities = 17/58 (29%), Positives = 22/58 (37%), Gaps = 1/58 (1%)
Frame = -3
Query: 712 ECPCRAAARCTPSCPCRL*TRCSXSWRRC-VPWSP*CAQCRRSRDVSRGTRWCPHAPS 542
+C C ++ C+ C CS S C +S C C R D PH PS
Sbjct: 72 DCSCSSSCSCSTGCDSSRSCSCSCSCSCCRSAYSSACRTCGRGNDDQSDAERAPHYPS 129
>UniRef50_Q54XL5 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 196
Score = 33.5 bits (73), Expect = 6.5
Identities = 17/56 (30%), Positives = 22/56 (39%)
Frame = +3
Query: 594 RHCAHQGLHGTHLRHEXEQRVHNRQGHEGVHLAAARQGHSPHHRRGAGQAHRNQGR 761
+H +H HG H E + H+ GH H GH H G H +GR
Sbjct: 76 KHESHH-FHGLHFHPEHQFGGHHFGGHHHHHGGHHHHGHHHGHHHGGHHGHHFEGR 130
>UniRef50_A5KAS9 Cluster: Tryptophan-rich antigen; n=3; cellular
organisms|Rep: Tryptophan-rich antigen - Plasmodium
vivax
Length = 2662
Score = 33.5 bits (73), Expect = 6.5
Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 6/57 (10%)
Frame = +3
Query: 597 HCAHQGLHGTHLRHEXEQRVHNRQGHE-GVHLAAARQG--HSPH-HRRGA--GQAHR 749
H H G H +H ++ VH Q H+ GVH A Q H H H+RG QAH+
Sbjct: 389 HPKHAHQKGVHPKHAHQKGVHPEQAHQRGVHPEQAHQKGVHPKHAHQRGVHPEQAHQ 445
>UniRef50_A7TPB7 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 228
Score = 33.5 bits (73), Expect = 6.5
Identities = 28/97 (28%), Positives = 41/97 (42%), Gaps = 3/97 (3%)
Frame = +3
Query: 447 QRFHPVRHRNYEDYGLHQV*VWELVYDHGRP*LGACGHHRV-PRETSRLLRHCAHQGLHG 623
Q HP+ H+++ H + +L++ P HH + P + + L H HQ LH
Sbjct: 64 QHHHPI-HQHHHHTHQHPHHIRQLLHHIHLP-----HHHTLQPPQVTVQLHHHIHQHLHH 117
Query: 624 TH-LRHEXEQRVH-NRQGHEGVHLAAARQGHSPHHRR 728
TH L H Q + Q H +H PHH R
Sbjct: 118 THQLHHHIHQLLQVIVQHHHPIHQHHHHTHQHPHHIR 154
>UniRef50_UPI0000D5573E Cluster: PREDICTED: similar to
Tyrosine-protein phosphatase non-receptor type 13
(Protein-tyrosine phosphatase 1E) (PTP-E1) (hPTPE1)
(PTP-BAS) (Protein-tyrosine phosphatase PTPL1)
(Fas-associated protein-tyrosine phosphatase 1) (FAP-1);
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
Tyrosine-protein phosphatase non-receptor type 13
(Protein-tyrosine phosphatase 1E) (PTP-E1) (hPTPE1)
(PTP-BAS) (Protein-tyrosine phosphatase PTPL1)
(Fas-associated protein-tyrosine phosphatase 1) (FAP-1)
- Tribolium castaneum
Length = 768
Score = 33.1 bits (72), Expect = 8.6
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +1
Query: 394 LVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMI 528
+ DGR ++ D +IKVND ++TT+I+D ++ G +C++
Sbjct: 708 VAARDGR-LKPGDRVIKVNDESVEHLSTTEIIDLLRIVRGPVCIV 751
>UniRef50_A0YER0 Cluster: Putative uncharacterized protein; n=1;
marine gamma proteobacterium HTCC2143|Rep: Putative
uncharacterized protein - marine gamma proteobacterium
HTCC2143
Length = 110
Score = 33.1 bits (72), Expect = 8.6
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
Frame = +3
Query: 438 YQSQRFHPVRHRNYEDYGLHQV*VWELVY--DHGRP*LGACGHHRVPRETSRLLRHCAHQ 611
+ + + HP+R Y G+ V +LV DH R A HR R RL + H+
Sbjct: 31 FHAFKIHPLRIA-YRT-GIDVTLVQQLVSGEDHQRLFKAALARHRKSRRDQRLHKSLRHK 88
Query: 612 GLHGTHLRHEXEQRVHNRQGHE 677
G+ L+H+ EQ +G +
Sbjct: 89 GIAQAELQHKIEQDYQETKGQK 110
>UniRef50_A5K2A3 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 1847
Score = 33.1 bits (72), Expect = 8.6
Identities = 14/49 (28%), Positives = 19/49 (38%)
Frame = +3
Query: 606 HQGLHGTHLRHEXEQRVHNRQGHEGVHLAAARQGHSPHHRRGAGQAHRN 752
H+G G H H E H+ H+ H A H+ H AH +
Sbjct: 714 HEGHDGAHHHHHHEHAHHDHAHHDNAHHDHAHHDHAHHDHAHHDHAHHD 762
>UniRef50_P21127 Cluster: PITSLRE serine/threonine-protein kinase
CDC2L1; n=60; Euteleostomi|Rep: PITSLRE
serine/threonine-protein kinase CDC2L1 - Homo sapiens
(Human)
Length = 795
Score = 33.1 bits (72), Expect = 8.6
Identities = 18/68 (26%), Positives = 27/68 (39%)
Frame = +3
Query: 558 HHRVPRETSRLLRHCAHQGLHGTHLRHEXEQRVHNRQGHEGVHLAAARQGHSPHHRRGAG 737
HHR + RH +H G H R + ++R H R+ AR+ RR
Sbjct: 98 HHRKDEKRKEKRRHRSHSAEGGKHARVKEKEREHERRKRHREEQDKARREWERQKRREMA 157
Query: 738 QAHRNQGR 761
+ H + R
Sbjct: 158 REHSRRER 165
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 859,601,191
Number of Sequences: 1657284
Number of extensions: 19267926
Number of successful extensions: 65950
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 60837
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 65521
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 70789333940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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