Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0993
         (816 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    25   2.8  
EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton anti...    25   3.7  
AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        23   8.5  
AF437889-1|AAL84184.1|  155|Anopheles gambiae odorant binding pr...    23   8.5  

>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 25.0 bits (52), Expect = 2.8
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = +3

Query: 615  LHGTHLRHEXEQRVHNRQGHEGVHLAAARQGHS 713
            L+ +HL H      H+  G EGV +  A    S
Sbjct: 1309 LNSSHLHHHLHHGHHHHHGGEGVPMGPANAAPS 1341


>EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton
           antiporter protein.
          Length = 647

 Score = 24.6 bits (51), Expect = 3.7
 Identities = 12/43 (27%), Positives = 24/43 (55%)
 Frame = +1

Query: 142 ALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNE 270
           ++TG ++LK  KQ+L  +DG +    ++     D+  I++  E
Sbjct: 575 SVTGTKLLKKTKQQLEPLDGTLGWRRSHRPSLHDISIIDEEEE 617


>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 23.4 bits (48), Expect = 8.5
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -1

Query: 423 ADGAAIMRYQVRNILRSGRHTLDFTQLVLS 334
           AD AA +RY   +  +  RH L + Q ++S
Sbjct: 483 ADTAAELRYAKEHADKENRHFLQYAQDLIS 512


>AF437889-1|AAL84184.1|  155|Anopheles gambiae odorant binding
           protein protein.
          Length = 155

 Score = 23.4 bits (48), Expect = 8.5
 Identities = 10/47 (21%), Positives = 23/47 (48%)
 Frame = +3

Query: 6   EALKRSQSMDVGQTWRCVCTETVNRSPQVARVLAPGDFPEESSEVCF 146
           ++L ++   ++ +  R VC      S ++A   + G FP++    C+
Sbjct: 35  QSLTQADMDEIAKGMRKVCMSRPKISEEMANYPSQGIFPDDKEFKCY 81


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 898,350
Number of Sequences: 2352
Number of extensions: 20986
Number of successful extensions: 102
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 101
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 102
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 86487024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)