Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0992
(750 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9U5L1 Cluster: Signal recognition particle receptor su... 311 1e-83
UniRef50_A7RR36 Cluster: Predicted protein; n=2; Nematostella ve... 295 1e-78
UniRef50_P08240 Cluster: Signal recognition particle receptor su... 283 3e-75
UniRef50_Q5D9K7 Cluster: SJCHGC06360 protein; n=2; cellular orga... 244 2e-63
UniRef50_Q9M0A0 Cluster: Signal recognition particle receptor-li... 223 5e-57
UniRef50_Q5KKG9 Cluster: Signal recognition particle binding pro... 219 8e-56
UniRef50_Q4PF71 Cluster: Putative uncharacterized protein; n=1; ... 212 7e-54
UniRef50_Q54ZR7 Cluster: Signal recognition particle receptor al... 206 6e-52
UniRef50_Q5CV65 Cluster: Srp101p GTpase. signal recognition part... 192 6e-48
UniRef50_A4RST6 Cluster: Predicted protein; n=1; Ostreococcus lu... 190 3e-47
UniRef50_A5K2S1 Cluster: Signal recognition particle receptor, p... 190 3e-47
UniRef50_Q01F74 Cluster: SrrA undefined product; n=1; Ostreococc... 188 2e-46
UniRef50_Q4Q161 Cluster: Signal recognition particle receptor li... 186 4e-46
UniRef50_Q2U958 Cluster: Signal recognition particle receptor; n... 185 9e-46
UniRef50_Q22T92 Cluster: SRP54-type protein, GTPase domain conta... 185 1e-45
UniRef50_A1CMF5 Cluster: Signal sequence receptor alpha subunit,... 182 1e-44
UniRef50_A2EHQ0 Cluster: SRP54-type protein, putative; n=1; Tric... 180 4e-44
UniRef50_A0E7D9 Cluster: Chromosome undetermined scaffold_81, wh... 175 7e-43
UniRef50_A7ANF7 Cluster: SRP54-type protein, GTPase domain conta... 173 3e-42
UniRef50_O43032 Cluster: Signal recognition particle receptor al... 172 7e-42
UniRef50_Q4N567 Cluster: Signal recognition particle receptor al... 171 2e-41
UniRef50_UPI0000499FED Cluster: Signal recognition particle rece... 160 3e-38
UniRef50_Q9Y7B0 Cluster: Signal sequence receptor alpha subunit;... 160 4e-38
UniRef50_A4F312 Cluster: Putative uncharacterized protein; n=2; ... 151 1e-35
UniRef50_A3LNS4 Cluster: GTP binding signal recognition particle... 149 1e-34
UniRef50_P32916 Cluster: Signal recognition particle receptor su... 149 1e-34
UniRef50_Q8SR80 Cluster: SIGNAL RECOGNITION PARTICLE RECEPTOR AL... 145 1e-33
UniRef50_Q7R237 Cluster: GLP_630_47100_45385; n=2; Giardia intes... 136 5e-31
UniRef50_A7DRN3 Cluster: Signal recognition particle-docking pro... 127 3e-28
UniRef50_Q8U051 Cluster: Signal recognition particle receptor; n... 125 1e-27
UniRef50_A0RUF0 Cluster: Signal recognition particle GTPase; n=1... 122 7e-27
UniRef50_P27414 Cluster: Probable signal recognition particle pr... 118 2e-25
UniRef50_Q57739 Cluster: Probable signal recognition particle pr... 112 8e-24
UniRef50_A2BN60 Cluster: Signal recognition particle GTPase; n=2... 108 1e-22
UniRef50_A3DNH8 Cluster: Signal recognition particle-docking pro... 107 2e-22
UniRef50_UPI00015BB111 Cluster: signal recognition particle-dock... 105 1e-21
UniRef50_Q8ZTT8 Cluster: Signal recognition particle protein (Do... 100 8e-20
UniRef50_Q2FS95 Cluster: Signal recognition particle-docking pro... 98 2e-19
UniRef50_A5UL28 Cluster: Signal recognition particle GTPase SRP5... 96 7e-19
UniRef50_UPI00015BCE02 Cluster: UPI00015BCE02 related cluster; n... 95 2e-18
UniRef50_Q5UY25 Cluster: Signal recognition particle receptor; n... 94 3e-18
UniRef50_Q11CW5 Cluster: Signal recognition particle-docking pro... 91 2e-17
UniRef50_Q2GDL8 Cluster: Signal recognition particle-docking pro... 91 4e-17
UniRef50_Q57AW4 Cluster: FtsY, signal recognition particle-docki... 89 1e-16
UniRef50_Q9PC71 Cluster: Cell division protein; n=11; Xanthomona... 88 2e-16
UniRef50_A3CWZ1 Cluster: Signal recognition particle-docking pro... 88 2e-16
UniRef50_Q6KYV1 Cluster: Signal recognition particle receptor Ft... 88 2e-16
UniRef50_Q0BWE6 Cluster: Signal recognition particle-docking pro... 87 6e-16
UniRef50_Q2RV63 Cluster: Cell division transporter substrate-bin... 86 8e-16
UniRef50_A5EYA3 Cluster: Signal recognition particle FtsY; n=2; ... 86 8e-16
UniRef50_A7ICC8 Cluster: Signal recognition particle-docking pro... 85 2e-15
UniRef50_Q5LTS4 Cluster: Signal recognition particle-docking pro... 84 3e-15
UniRef50_Q8PYQ0 Cluster: Signal recognition particle subunit Ffh... 83 5e-15
UniRef50_Q4FT71 Cluster: Cell division transporter substrate-bin... 83 9e-15
UniRef50_A3VPZ8 Cluster: FtsY, signal recognition particle-docki... 83 9e-15
UniRef50_A3UI71 Cluster: Probable cell division protein; n=1; Oc... 83 9e-15
UniRef50_A3IG83 Cluster: Recognition particle-docking protein; n... 81 2e-14
UniRef50_Q5P9Q2 Cluster: Cell division protein; n=2; Anaplasma|R... 81 3e-14
UniRef50_Q8G736 Cluster: FtsY signal recognition particle; n=4; ... 81 4e-14
UniRef50_A6DTV8 Cluster: Fused Signal Recognition Particle (SRP)... 79 1e-13
UniRef50_Q7MXM2 Cluster: Signal recognition particle-docking pro... 79 2e-13
UniRef50_P51835 Cluster: Cell division protein ftsY homolog; n=4... 78 3e-13
UniRef50_Q60CH3 Cluster: Cytochrome oxidase assembly family prot... 77 4e-13
UniRef50_Q64TK4 Cluster: Recognition particle-docking protein Ft... 77 5e-13
UniRef50_A5CCH6 Cluster: Cell division ABC transporter, periplas... 77 5e-13
UniRef50_A3YMT1 Cluster: Signal recognition particle-docking pro... 77 5e-13
UniRef50_A1RXA8 Cluster: Signal recognition particle-docking pro... 77 5e-13
UniRef50_Q895M6 Cluster: Signal recognition particle receptor ft... 77 6e-13
UniRef50_Q0HPY1 Cluster: Signal recognition particle-docking pro... 77 6e-13
UniRef50_O32861 Cluster: Cell division protein ftsY homolog; n=1... 77 6e-13
UniRef50_Q6MBM6 Cluster: Probable signal recognition particle; n... 76 8e-13
UniRef50_A5US56 Cluster: Signal recognition particle-docking pro... 76 8e-13
UniRef50_A4WFP3 Cluster: Signal recognition particle-docking pro... 76 8e-13
UniRef50_Q74IQ0 Cluster: Signal recognition particle receptor Ft... 76 1e-12
UniRef50_Q0IE72 Cluster: Signal recognition particle-docking pro... 75 2e-12
UniRef50_Q8GDY7 Cluster: Signal recognition particle receptor Ft... 74 3e-12
UniRef50_Q97IA0 Cluster: Signal recognition particle GTPase, Fts... 74 4e-12
UniRef50_A6T2T2 Cluster: Signal recognition particle receptor; n... 74 4e-12
UniRef50_Q1NXJ3 Cluster: Cell division transporter substrate-bin... 73 6e-12
UniRef50_Q6YPP6 Cluster: Signal recognition particle-docking pro... 73 8e-12
UniRef50_Q058E9 Cluster: Signal recognition particle receptor; n... 73 1e-11
UniRef50_A4E6S8 Cluster: Putative uncharacterized protein; n=1; ... 73 1e-11
UniRef50_O67066 Cluster: Cell division protein ftsY homolog; n=5... 73 1e-11
UniRef50_A3ER96 Cluster: Signal recognition particle GTPase; n=1... 72 1e-11
UniRef50_P57137 Cluster: Cell division protein ftsY homolog; n=2... 72 2e-11
UniRef50_A7H885 Cluster: Signal recognition particle-docking pro... 71 3e-11
UniRef50_Q9PR03 Cluster: SRP family of GTP-binding proteins-cell... 71 4e-11
UniRef50_Q1VJW0 Cluster: Cell division particle; n=2; Psychrofle... 70 5e-11
UniRef50_O05289 Cluster: FtsY protein; n=5; Mollicutes|Rep: FtsY... 70 5e-11
UniRef50_P66843 Cluster: Cell division protein ftsY homolog; n=4... 69 9e-11
UniRef50_Q1VMG0 Cluster: Signal recognition particle-docking pro... 69 1e-10
UniRef50_Q1V114 Cluster: Cell division particle; n=2; Candidatus... 69 1e-10
UniRef50_A6GK47 Cluster: Signal recognition particle-docking pro... 69 1e-10
UniRef50_Q68VX4 Cluster: Cell division protein ftsY homolog; n=2... 69 1e-10
UniRef50_O33010 Cluster: Cell division protein ftsY homolog; n=9... 69 1e-10
UniRef50_Q97QH0 Cluster: Signal recognition particle-docking pro... 69 2e-10
UniRef50_Q6MDH1 Cluster: Probable signal recognition particle ch... 69 2e-10
UniRef50_Q315N5 Cluster: Signal recognition particle-docking pro... 69 2e-10
UniRef50_Q6MNR5 Cluster: Signal recognition particle-docking pro... 68 2e-10
UniRef50_Q7UT17 Cluster: Cell division protein FtsY; n=2; Planct... 68 3e-10
UniRef50_O51103 Cluster: Cell division protein, putative; n=3; B... 67 5e-10
UniRef50_A1RXH9 Cluster: GTP-binding signal recognition particle... 67 5e-10
UniRef50_P73930 Cluster: Cell division protein ftsY homolog; n=1... 67 5e-10
UniRef50_Q7VRI6 Cluster: Cell division protein FtsY; n=1; Candid... 66 9e-10
UniRef50_A4RQK2 Cluster: IISP family transporter: signal recogni... 65 2e-09
UniRef50_Q7NP07 Cluster: Glr0251 protein; n=7; Cyanobacteria|Rep... 65 2e-09
UniRef50_Q89B28 Cluster: Cell division protein ftsY homolog; n=1... 65 2e-09
UniRef50_Q1AW79 Cluster: Signal recognition particle-docking pro... 64 5e-09
UniRef50_O15821 Cluster: Signal recognition particle 54 kDa prot... 64 5e-09
UniRef50_P14929 Cluster: Cell division protein ftsY homolog; n=2... 64 5e-09
UniRef50_Q9RS67 Cluster: Signal recognition particle-docking pro... 63 6e-09
UniRef50_Q1ILB3 Cluster: Signal recognition particle-docking pro... 63 8e-09
UniRef50_Q01442 Cluster: Signal recognition particle protein; n=... 63 8e-09
UniRef50_A1IE17 Cluster: Cell division protein FtsY; n=2; Bacter... 62 1e-08
UniRef50_Q9SWS7 Cluster: Chloroplast SRP receptor homolog, alpha... 62 1e-08
UniRef50_A7PXY2 Cluster: Chromosome chr15 scaffold_37, whole gen... 62 1e-08
UniRef50_P74214 Cluster: Signal recognition particle protein; n=... 62 1e-08
UniRef50_A6DNU8 Cluster: Signal recognition particle; n=1; Lenti... 62 2e-08
UniRef50_Q014I0 Cluster: Chloroplast SRP receptor cpFtsY; n=2; O... 61 2e-08
UniRef50_Q7VPR9 Cluster: FtsY cell division protein; n=8; Chlamy... 60 8e-08
UniRef50_A4E6S7 Cluster: Putative uncharacterized protein; n=1; ... 59 1e-07
UniRef50_P56005 Cluster: Signal recognition particle protein; n=... 59 1e-07
UniRef50_Q73L22 Cluster: Signal recognition particle-docking pro... 58 2e-07
UniRef50_P75362 Cluster: Cell division protein ftsY homolog; n=4... 58 2e-07
UniRef50_A4XLF5 Cluster: Signal recognition particle protein; n=... 58 3e-07
UniRef50_Q5U794 Cluster: Signal recognition particle GTPase; n=1... 57 4e-07
UniRef50_O25458 Cluster: Cell division protein ftsY homolog; n=1... 57 4e-07
UniRef50_O83587 Cluster: Cell division protein; n=1; Treponema p... 57 5e-07
UniRef50_UPI00006CE525 Cluster: SRP54-type protein, GTPase domai... 56 7e-07
UniRef50_O51637 Cluster: Signal recognition particle protein; n=... 56 9e-07
UniRef50_Q5AK67 Cluster: Putative uncharacterized protein; n=2; ... 56 9e-07
UniRef50_A6Q553 Cluster: Signal recognition particle protein; n=... 56 1e-06
UniRef50_O07347 Cluster: Signal recognition particle protein; n=... 56 1e-06
UniRef50_Q54431 Cluster: Signal recognition particle protein; n=... 56 1e-06
UniRef50_A6DB28 Cluster: Signal recognition particle protein; n=... 55 2e-06
UniRef50_A7DS34 Cluster: GTP-binding signal recognition particle... 55 2e-06
UniRef50_Q8ZT95 Cluster: Signal recognition 54 kDa protein; n=5;... 55 2e-06
UniRef50_Q6BNS1 Cluster: Debaryomyces hansenii chromosome E of s... 54 3e-06
UniRef50_Q895M4 Cluster: Signal recognition particle, subunit ff... 54 5e-06
UniRef50_Q9Z966 Cluster: Signal Recognition Particle GTPase; n=8... 53 7e-06
UniRef50_Q8KD87 Cluster: Signal recognition particle protein; n=... 53 7e-06
UniRef50_Q6YPP7 Cluster: Signal recognition particle GTPase; n=2... 53 7e-06
UniRef50_Q8SS36 Cluster: SIGNAL RECOGNITION PARTICLE 54kDa SUBUN... 53 7e-06
UniRef50_P37107 Cluster: Signal recognition particle 54 kDa prot... 53 7e-06
UniRef50_A7HFQ6 Cluster: Signal recognition particle protein; n=... 53 9e-06
UniRef50_Q7R3W6 Cluster: GLP_68_88884_87292; n=1; Giardia lambli... 53 9e-06
UniRef50_Q8C1Y6 Cluster: Colon RCB-0549 Cle-H3 cDNA, RIKEN full-... 52 1e-05
UniRef50_Q7UI11 Cluster: Signal recognition particle protein; n=... 52 2e-05
UniRef50_Q5PAC1 Cluster: Signal recognition particle protein; n=... 52 2e-05
UniRef50_P20424 Cluster: Signal recognition particle subunit SRP... 52 2e-05
UniRef50_O67615 Cluster: Signal recognition particle protein; n=... 52 2e-05
UniRef50_P49966 Cluster: Signal recognition particle 54 kDa prot... 52 2e-05
UniRef50_Q67K29 Cluster: Flagellar GTP-binding protein; n=1; Sym... 51 3e-05
UniRef50_Q5QUU7 Cluster: Signal recognition particle GTPase; n=4... 51 3e-05
UniRef50_P37106 Cluster: Signal recognition particle 54 kDa prot... 51 3e-05
UniRef50_A6Q2M1 Cluster: Flagellar biosynthesis protein FlhF; n=... 50 5e-05
UniRef50_A4MIB2 Cluster: GTP-binding signal recognition particle... 50 5e-05
UniRef50_A7TKC3 Cluster: Putative uncharacterized protein; n=1; ... 50 5e-05
UniRef50_O83431 Cluster: Signal recognition particle protein; n=... 50 6e-05
UniRef50_A3DCP5 Cluster: GTP-binding signal recognition particle... 50 6e-05
UniRef50_A0RUN9 Cluster: Signal recognition particle GTPase; n=1... 50 8e-05
UniRef50_Q4PB16 Cluster: Putative uncharacterized protein; n=1; ... 49 1e-04
UniRef50_P61011 Cluster: Signal recognition particle 54 kDa prot... 48 3e-04
UniRef50_A2WZA2 Cluster: Putative uncharacterized protein; n=2; ... 47 4e-04
UniRef50_A2F1E7 Cluster: SRP54-type protein, putative; n=1; Tric... 47 4e-04
UniRef50_P66845 Cluster: Signal recognition particle protein; n=... 47 4e-04
UniRef50_Q3V8C7 Cluster: Flagellar biosynthetic protein FlhF, pu... 47 6e-04
UniRef50_A6TRN6 Cluster: GTP-binding signal recognition particle... 47 6e-04
UniRef50_A7CS33 Cluster: Signal recognition particle protein; n=... 46 8e-04
UniRef50_Q18D08 Cluster: Signal recognition particle complex, GT... 46 0.001
UniRef50_Q6CRH5 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 46 0.001
UniRef50_O67266 Cluster: Flagellar biosynthesis protein flhF; n=... 46 0.001
UniRef50_Q97H67 Cluster: Flagellar GTP-binding protein, FlhF; n=... 46 0.001
UniRef50_Q2LT05 Cluster: Flagellar biosynthesis protein; n=1; Sy... 46 0.001
UniRef50_Q1EWK0 Cluster: GTP-binding signal recognition particle... 46 0.001
UniRef50_Q0EZI9 Cluster: Signal recognition particle GTPase; n=1... 46 0.001
UniRef50_A0LC37 Cluster: GTP-binding signal recognition particle... 46 0.001
UniRef50_Q83MV0 Cluster: Signal recognition particle protein; n=... 45 0.002
UniRef50_A7D784 Cluster: GTP-binding signal recognition particle... 45 0.002
UniRef50_Q7RB08 Cluster: Signal recognition particle protein SRP... 45 0.002
UniRef50_A2E0A3 Cluster: SRP54-type protein, putative; n=2; Tric... 45 0.002
UniRef50_Q8EQW2 Cluster: Flagella-associated protein; n=1; Ocean... 44 0.003
UniRef50_A4XIZ5 Cluster: GTP-binding signal recognition particle... 44 0.003
UniRef50_Q1FN29 Cluster: GTP-binding signal recognition particle... 44 0.004
UniRef50_Q010M2 Cluster: Signal recognition particle 54kDa subun... 44 0.004
UniRef50_P75054 Cluster: Signal recognition particle protein; n=... 44 0.004
UniRef50_A3ER43 Cluster: Signal recognition particle GTPase; n=2... 44 0.005
UniRef50_A1AUL7 Cluster: GTP-binding signal recognition particle... 43 0.007
UniRef50_Q57565 Cluster: Signal recognition 54 kDa protein; n=13... 43 0.007
UniRef50_Q8RA09 Cluster: Flagellar GTP-binding protein; n=3; The... 43 0.009
UniRef50_A6C932 Cluster: GTP-binding signal recognition particle... 43 0.009
UniRef50_A2STI3 Cluster: GTP-binding signal recognition particle... 43 0.009
UniRef50_Q8Y953 Cluster: Lmo0681 protein; n=13; Listeria|Rep: Lm... 42 0.012
UniRef50_Q2RKD0 Cluster: GTP-binding signal recognition particle... 42 0.012
UniRef50_Q2ADZ9 Cluster: GTP-binding signal recognition particle... 42 0.012
UniRef50_Q0AA01 Cluster: GTP-binding signal recognition particle... 42 0.012
UniRef50_A0Q041 Cluster: Flagellar biosynthesis protein flhF; n=... 42 0.012
UniRef50_Q2BJ99 Cluster: Flagellar biosynthetic protein FlhF, pu... 42 0.016
UniRef50_Q18ZC2 Cluster: GTP-binding signal recognition particle... 42 0.016
UniRef50_Q01PP6 Cluster: GTP-binding signal recognition particle... 42 0.016
UniRef50_A6BZ37 Cluster: Signal recognition particle protein; n=... 42 0.016
UniRef50_Q3ADC7 Cluster: Flagellar biosynthesis protein FlhF; n=... 42 0.021
UniRef50_A1HN19 Cluster: GTP-binding signal recognition particle... 42 0.021
UniRef50_Q21IQ3 Cluster: GTP-binding signal recognition particle... 41 0.028
UniRef50_A6F8T5 Cluster: Flagellar biosynthesis protein; n=1; Mo... 41 0.037
UniRef50_Q9HMN5 Cluster: Signal recognition 54 kDa protein; n=14... 41 0.037
UniRef50_Q9X009 Cluster: Flagellar biosynthesis protein FlhF; n=... 40 0.049
UniRef50_A4M5W2 Cluster: GTP-binding signal recognition particle... 40 0.049
UniRef50_Q97ZE7 Cluster: Signal recognition 54 kDa protein; n=8;... 40 0.049
UniRef50_UPI00015BD4F8 Cluster: UPI00015BD4F8 related cluster; n... 40 0.065
UniRef50_Q485K6 Cluster: Flagellar biosynthetic protein FlhF; n=... 40 0.065
UniRef50_Q41BW8 Cluster: GTP-binding signal recognition particle... 40 0.065
UniRef50_A6DBP7 Cluster: Flagellar biosynthesis regulator FlhF; ... 40 0.065
UniRef50_A1WCF3 Cluster: GTP-binding signal recognition particle... 40 0.065
UniRef50_O52908 Cluster: Flagellar biosynthesis protein flhF; n=... 40 0.065
UniRef50_Q01960 Cluster: Flagellar biosynthesis protein flhF; n=... 40 0.086
UniRef50_Q5WFS1 Cluster: Flagellar biosynthesis protein FlhF; n=... 39 0.11
UniRef50_Q2B7H4 Cluster: Flagellar biosynthesis regulator FlhF; ... 39 0.11
UniRef50_A6CQB0 Cluster: Flagellar biosynthesis regulator FlhF; ... 39 0.11
UniRef50_Q1JZR9 Cluster: GTP-binding signal recognition particle... 39 0.15
UniRef50_Q7WJE2 Cluster: Flagellar biosynthesis protein; n=2; Bo... 38 0.20
UniRef50_Q6AJS5 Cluster: Related to flagellar biosynthesis prote... 38 0.20
UniRef50_Q3V873 Cluster: Flagellar biosynthetic protein FlhF; n=... 38 0.20
UniRef50_Q4IZ83 Cluster: GTP-binding signal recognition particle... 38 0.20
UniRef50_A4BUF1 Cluster: GTP-binding signal recognition particle... 38 0.20
UniRef50_Q4UKH4 Cluster: Signal recognition particle protein; n=... 38 0.20
UniRef50_Q9KA53 Cluster: Flagella-associated protein; n=1; Bacil... 38 0.26
UniRef50_A6M182 Cluster: GTP-binding signal recognition particle... 38 0.26
UniRef50_Q8TUY9 Cluster: Signal recognition 54 kDa protein; n=4;... 38 0.26
UniRef50_O52256 Cluster: Flagellar biosynthesis protein flhF; n=... 38 0.26
UniRef50_Q3V7T7 Cluster: Flagellar biosynthetic protein; n=1; Ge... 38 0.35
UniRef50_Q2IQP9 Cluster: GTP-binding signal recognition particle... 38 0.35
UniRef50_A6W0V3 Cluster: GTP-binding signal recognition particle... 38 0.35
UniRef50_A3GPY9 Cluster: Signal recognition particle-docking pro... 38 0.35
UniRef50_A6Q939 Cluster: Flagellar biosynthesis protein FlhF; n=... 37 0.46
UniRef50_A2UBG2 Cluster: GTP-binding signal recognition particle... 37 0.46
UniRef50_Q3A5E7 Cluster: Flagellar GTP-binding protein; n=1; Pel... 36 0.81
UniRef50_O68049 Cluster: Iron(Iii) dicitrate transport ATP-bindi... 36 0.81
UniRef50_A0Y185 Cluster: Flagellar biosynthesis regulator FlhF; ... 36 0.81
UniRef50_Q7S8Y8 Cluster: Putative uncharacterized protein NCU088... 36 0.81
UniRef50_Q8TM86 Cluster: Putative uncharacterized protein; n=3; ... 36 0.81
UniRef50_Q7VH24 Cluster: Flagellar GTP-binding protein FlhF; n=3... 36 1.1
UniRef50_Q1RN79 Cluster: FlhF; n=1; Azospirillum brasilense|Rep:... 36 1.4
UniRef50_A3IF09 Cluster: Flagellar biosynthesis regulator FlhF; ... 36 1.4
UniRef50_A1V7R2 Cluster: Dipeptide transport system permease pro... 36 1.4
UniRef50_Q1ZIV3 Cluster: Flagellar biosynthesis protein; n=1; Ps... 35 1.9
UniRef50_A4C6B9 Cluster: Flagellar biosynthesis protein; n=1; Ps... 35 1.9
UniRef50_A1WD43 Cluster: Excinuclease ABC, A subunit; n=8; Burkh... 35 1.9
UniRef50_Q74ZB3 Cluster: AGR286Cp; n=1; Eremothecium gossypii|Re... 35 1.9
UniRef50_UPI000023ECC3 Cluster: predicted protein; n=1; Gibberel... 35 2.5
UniRef50_Q1Z797 Cluster: Flagellar biosynthesis protein; n=5; Vi... 35 2.5
UniRef50_Q5ZUK9 Cluster: Flagellar GTP-binding protein FlhF; n=4... 34 3.3
UniRef50_Q39EQ1 Cluster: Adenylyl-sulfate kinase; n=2; Burkholde... 34 3.3
UniRef50_Q9AXU1 Cluster: Chloroplast SRP54; n=1; Chlamydomonas r... 34 3.3
UniRef50_Q6K5K0 Cluster: Myosin-like protein; n=5; Oryza sativa|... 34 3.3
UniRef50_Q5CVM4 Cluster: Secreted protein with cysteine rich rep... 34 3.3
UniRef50_Q4Q2J2 Cluster: Peroxisome biosynthesis protein-like pr... 34 3.3
UniRef50_Q3V8C0 Cluster: Flagellar biosynthetic protein FlhF, pu... 34 4.3
UniRef50_Q9L180 Cluster: Putative uncharacterized protein SCO739... 33 5.7
UniRef50_Q1K3Z0 Cluster: Sugar transferase; n=1; Desulfuromonas ... 33 5.7
UniRef50_Q08SV7 Cluster: Putative uncharacterized protein; n=1; ... 33 5.7
UniRef50_A1SLX4 Cluster: Putative uncharacterized protein; n=1; ... 33 5.7
UniRef50_Q82GV5 Cluster: Putative uncharacterized protein; n=1; ... 33 7.5
UniRef50_Q9LB17 Cluster: Flagellar biosynthesis protein FlhF; n=... 33 7.5
UniRef50_Q3DXQ4 Cluster: Regulatory protein, TetR; n=2; Chlorofl... 33 7.5
UniRef50_Q2GZ47 Cluster: Predicted protein; n=1; Chaetomium glob... 33 7.5
UniRef50_Q649P3 Cluster: Dihydropteroate synthase; n=1; uncultur... 33 7.5
UniRef50_Q9UUH3 Cluster: Uncharacterized kinase mug58; n=1; Schi... 33 7.5
UniRef50_Q474R4 Cluster: Adenylyl-sulfate kinase; n=1; Ralstonia... 33 9.9
UniRef50_Q0ARW4 Cluster: GTP-binding signal recognition particle... 33 9.9
UniRef50_Q0A864 Cluster: ATP-dependent helicase HrpA; n=8; Gamma... 33 9.9
UniRef50_A7SCI6 Cluster: Predicted protein; n=2; Nematostella ve... 33 9.9
>UniRef50_Q9U5L1 Cluster: Signal recognition particle receptor
subunit alpha homolog; n=9; Coelomata|Rep: Signal
recognition particle receptor subunit alpha homolog -
Drosophila melanogaster (Fruit fly)
Length = 614
Score = 311 bits (764), Expect = 1e-83
Identities = 147/202 (72%), Positives = 168/202 (83%)
Frame = +1
Query: 1 RPVLDKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILS 180
+P L+K+RDHLI KNVA++IA KLCDSVA L+GK +GTFDS+A VK LTESLVRILS
Sbjct: 316 QPALEKMRDHLISKNVASEIAAKLCDSVAASLDGKQMGTFDSIASQVKEALTESLVRILS 375
Query: 181 PKRRVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFR 360
PKRR+DI+RD L +K+ GRPY + FCGVNGVGKSTNLAKICFWLIEND +VLIAACDTFR
Sbjct: 376 PKRRIDIIRDALESKRNGRPYTIIFCGVNGVGKSTNLAKICFWLIENDFNVLIAACDTFR 435
Query: 361 AGAVEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVL 540
AGAVEQLRTHTR MV LYEKGYGKDAAGIAMEAI++A DT+ DVVL
Sbjct: 436 AGAVEQLRTHTRHLNALHPAAKHDGRNMVQLYEKGYGKDAAGIAMEAIKFAHDTRVDVVL 495
Query: 541 IDTAGRMQDNEPLMRALAKLIR 606
+DTAGRMQDNEPLMR+L+KLI+
Sbjct: 496 VDTAGRMQDNEPLMRSLSKLIK 517
Score = 72.5 bits (170), Expect = 1e-11
Identities = 34/43 (79%), Positives = 36/43 (83%)
Frame = +2
Query: 608 VNEPDTVLFVGXALVXNEAVDQLVKFNQALADYSSXSIPHVID 736
VN PD VLFVG ALV NEAVDQLVKFNQ+LADYSS PH+ID
Sbjct: 518 VNNPDLVLFVGEALVGNEAVDQLVKFNQSLADYSSNENPHIID 560
>UniRef50_A7RR36 Cluster: Predicted protein; n=2; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 625
Score = 295 bits (723), Expect = 1e-78
Identities = 137/201 (68%), Positives = 164/201 (81%)
Frame = +1
Query: 4 PVLDKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSP 183
PVL+K+++HL KNVAADI+ KLCDSVA KLEGKV+GTF +A TVK++L ESL++ILSP
Sbjct: 327 PVLEKMKEHLTSKNVAADISEKLCDSVATKLEGKVIGTFSGIASTVKSSLEESLIQILSP 386
Query: 184 KRRVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRA 363
KRRVDILRD + K++G+PYV+ FCGVNGVGKSTNLAK+CFWL+EN+ V+IAACDTFRA
Sbjct: 387 KRRVDILRDAMENKRKGKPYVVTFCGVNGVGKSTNLAKVCFWLLENNFRVMIAACDTFRA 446
Query: 364 GAVEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLI 543
GAVEQLRTH R V LYEKGYGKDAA IAM+AI +A + + DVVL+
Sbjct: 447 GAVEQLRTHVRHLNALHPPAHANGPPSVLLYEKGYGKDAASIAMDAINFAREQRVDVVLV 506
Query: 544 DTAGRMQDNEPLMRALAKLIR 606
DTAGRMQDNEPLMRAL+KLI+
Sbjct: 507 DTAGRMQDNEPLMRALSKLIK 527
Score = 64.9 bits (151), Expect = 2e-09
Identities = 31/43 (72%), Positives = 35/43 (81%)
Frame = +2
Query: 608 VNEPDTVLFVGXALVXNEAVDQLVKFNQALADYSSXSIPHVID 736
+N+PD VLFVG ALV NEAVDQL KFNQALAD+SS P +ID
Sbjct: 528 LNDPDLVLFVGEALVGNEAVDQLKKFNQALADHSSQDRPRLID 570
>UniRef50_P08240 Cluster: Signal recognition particle receptor
subunit alpha; n=28; Coelomata|Rep: Signal recognition
particle receptor subunit alpha - Homo sapiens (Human)
Length = 638
Score = 283 bits (694), Expect = 3e-75
Identities = 141/199 (70%), Positives = 158/199 (79%)
Frame = +1
Query: 7 VLDKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSPK 186
VLDK+RDHLI KNVAADIA +LC+SVA KLEGKV+GTF +V TVK L ESLV+IL P+
Sbjct: 341 VLDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQESLVQILQPQ 400
Query: 187 RRVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAG 366
RRVD+LRD + A++ RPYV+ FCGVNGVGKSTNLAKI FWL+EN SVLIAACDTFRAG
Sbjct: 401 RRVDMLRDIMDAQRRQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVLIAACDTFRAG 460
Query: 367 AVEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLID 546
AVEQLRTHTR MV L+EKGYGKDAAGIAMEAI +A + DVVL+D
Sbjct: 461 AVEQLRTHTRRLSALHPPEKHGGRTMVQLFEKGYGKDAAGIAMEAIAFARNQGFDVVLVD 520
Query: 547 TAGRMQDNEPLMRALAKLI 603
TAGRMQDN PLM ALAKLI
Sbjct: 521 TAGRMQDNAPLMTALAKLI 539
Score = 64.5 bits (150), Expect = 3e-09
Identities = 31/43 (72%), Positives = 34/43 (79%)
Frame = +2
Query: 608 VNEPDTVLFVGXALVXNEAVDQLVKFNQALADYSSXSIPHVID 736
VN PD VLFVG ALV NEAVDQLVKFN+ALAD+S P +ID
Sbjct: 541 VNTPDLVLFVGEALVGNEAVDQLVKFNRALADHSMAQTPRLID 583
>UniRef50_Q5D9K7 Cluster: SJCHGC06360 protein; n=2; cellular
organisms|Rep: SJCHGC06360 protein - Schistosoma
japonicum (Blood fluke)
Length = 659
Score = 244 bits (597), Expect = 2e-63
Identities = 122/201 (60%), Positives = 143/201 (71%)
Frame = +1
Query: 4 PVLDKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSP 183
P L++LR+ L+ KNVA IA ++C SV+ +L G LGTF+ + VKA+L + RIL
Sbjct: 362 PCLEQLRERLVSKNVAMSIAERVCSSVSDRLVGTSLGTFERIYPRVKASLEDVCSRILVS 421
Query: 184 KRRVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRA 363
RRVD+LRD L A+ GRPY + FCGVNGVGKSTNLAKI FWLIE + VLIAACDTFR+
Sbjct: 422 GRRVDVLRDALDARTPGRPYSIVFCGVNGVGKSTNLAKIAFWLIEKNFRVLIAACDTFRS 481
Query: 364 GAVEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLI 543
GAVEQLRTH R MV LYE+GYG+DAA IA AI YA D DVVL+
Sbjct: 482 GAVEQLRTHVRKLNYIHPADQHGGQIMVELYEQGYGRDAASIARSAINYARDRHFDVVLV 541
Query: 544 DTAGRMQDNEPLMRALAKLIR 606
DTAGRMQDNEPLMRALA LI+
Sbjct: 542 DTAGRMQDNEPLMRALALLIQ 562
Score = 62.5 bits (145), Expect = 1e-08
Identities = 30/42 (71%), Positives = 33/42 (78%)
Frame = +2
Query: 611 NEPDTVLFVGXALVXNEAVDQLVKFNQALADYSSXSIPHVID 736
N+PD VLFVG ALV NEAVDQLVKFNQ+LAD+S P ID
Sbjct: 564 NQPDLVLFVGEALVGNEAVDQLVKFNQSLADHSYSDHPRCID 605
>UniRef50_Q9M0A0 Cluster: Signal recognition particle receptor-like
protein; n=14; Eukaryota|Rep: Signal recognition
particle receptor-like protein - Arabidopsis thaliana
(Mouse-ear cress)
Length = 634
Score = 223 bits (544), Expect = 5e-57
Identities = 111/200 (55%), Positives = 147/200 (73%)
Frame = +1
Query: 4 PVLDKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSP 183
P L L++ L+ KNVA +IA KLC+SV LEGK L +F ++ TV+A + ++LVRIL+P
Sbjct: 350 PALKALKERLMTKNVAEEIAEKLCESVEASLEGKKLSSFTRISSTVQAAMEDALVRILTP 409
Query: 184 KRRVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRA 363
+R +DILRD AK++ +PYV+ F GVNGVGKSTNLAK+ +WL ++ +SV++AACDTFR+
Sbjct: 410 RRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLQQHKVSVMMAACDTFRS 469
Query: 364 GAVEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLI 543
GAVEQLRTH R + ++EKGY KD A +A EAI+ A+ +DVVL+
Sbjct: 470 GAVEQLRTHAR-------------RLQIPIFEKGYEKDPAVVAKEAIQEATRNGSDVVLV 516
Query: 544 DTAGRMQDNEPLMRALAKLI 603
DTAGRMQDNEPLMRAL+KLI
Sbjct: 517 DTAGRMQDNEPLMRALSKLI 536
Score = 58.0 bits (134), Expect = 2e-07
Identities = 27/43 (62%), Positives = 33/43 (76%)
Frame = +2
Query: 608 VNEPDTVLFVGXALVXNEAVDQLVKFNQALADYSSXSIPHVID 736
+N+PD VLFVG ALV N+AVDQL KFNQ L+D S+ P +ID
Sbjct: 538 LNQPDLVLFVGEALVGNDAVDQLSKFNQKLSDLSTSGNPRLID 580
>UniRef50_Q5KKG9 Cluster: Signal recognition particle binding protein,
putative; n=1; Filobasidiella neoformans|Rep: Signal
recognition particle binding protein, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 674
Score = 219 bits (534), Expect = 8e-56
Identities = 115/215 (53%), Positives = 139/215 (64%), Gaps = 15/215 (6%)
Frame = +1
Query: 4 PVLDKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSP 183
PVL ++ HL+ KNVA DIA KLC+SV L GK LG +SV V++ L+ SL R+L+P
Sbjct: 357 PVLIEMEKHLMSKNVAKDIAEKLCNSVGAALVGKKLGGLNSVKSEVQSVLSTSLTRVLTP 416
Query: 184 KRRVDILRDCLHAKQEGR---------------PYVMAFCGVNGVGKSTNLAKICFWLIE 318
K DIL + + PY + F GVNGVGKSTNL+K+CFWL++
Sbjct: 417 KTSTDILLEIQRKRSSHLATLSTTSSPLDSGPDPYTLTFVGVNGVGKSTNLSKVCFWLLQ 476
Query: 319 NDLSVLIAACDTFRAGAVEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAME 498
N L VLIAACDTFR+GAVEQLR H R + L+E+GYGKDAAGIA +
Sbjct: 477 NGLRVLIAACDTFRSGAVEQLRVHVRNLGALGEEMGQGQGKRIELFERGYGKDAAGIAKD 536
Query: 499 AIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLI 603
AI YA + DVVLIDTAGRMQDNEPLMRALAKL+
Sbjct: 537 AIAYAKEHAFDVVLIDTAGRMQDNEPLMRALAKLV 571
Score = 52.8 bits (121), Expect = 9e-06
Identities = 23/38 (60%), Positives = 29/38 (76%)
Frame = +2
Query: 608 VNEPDTVLFVGXALVXNEAVDQLVKFNQALADYSSXSI 721
VN PD ++FVG ALV NEAVDQL KF++AL D+S +
Sbjct: 573 VNNPDKIVFVGEALVGNEAVDQLTKFDRALRDFSGAGV 610
>UniRef50_Q4PF71 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 705
Score = 212 bits (518), Expect = 7e-54
Identities = 120/227 (52%), Positives = 139/227 (61%), Gaps = 23/227 (10%)
Frame = +1
Query: 4 PVLDKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSP 183
P L + HL KNVAAD+A +LCDSV L GK LG+F SV VK L E++ RIL+P
Sbjct: 384 PALSAMASHLQSKNVAADVAQRLCDSVERNLVGKNLGSFGSVKVEVKKALEEAITRILTP 443
Query: 184 KRRVDILRDCLHAKQ---------------------EGRPYVMAFCGVNGVGKSTNLAKI 300
K DIL + +Q + PY + F GVNGVGKSTNLAK+
Sbjct: 444 KSSTDILLEIATKRQRITAASSLALATSAKDKELASKPDPYSICFVGVNGVGKSTNLAKV 503
Query: 301 CFWLIENDLSVLIAACDTFRAGAVEQLRTHTRXXXXXXXXXXXXXXXM--VTLYEKGYGK 474
CFWL++N L VLIAACDTFRAGAVEQLR H R + LYE+GYGK
Sbjct: 504 CFWLLQNRLRVLIAACDTFRAGAVEQLRVHVRNLGQLRVDGVALEEQKGHIELYERGYGK 563
Query: 475 DAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIRGQR 615
DAAGIA +A+ YA DVVLIDTAGRMQDNEPLMRALAKL+ R
Sbjct: 564 DAAGIAKDALSYAKAEGFDVVLIDTAGRMQDNEPLMRALAKLVSVNR 610
Score = 54.8 bits (126), Expect = 2e-06
Identities = 24/44 (54%), Positives = 32/44 (72%)
Frame = +2
Query: 605 AVNEPDTVLFVGXALVXNEAVDQLVKFNQALADYSSXSIPHVID 736
+VN PD ++FVG ALV NEAVDQ+ KF+ A+ D+S S P +D
Sbjct: 607 SVNRPDKIIFVGEALVGNEAVDQITKFDGAMKDFSGVSNPRGLD 650
>UniRef50_Q54ZR7 Cluster: Signal recognition particle receptor alpha
subunit; n=2; Dictyostelium discoideum|Rep: Signal
recognition particle receptor alpha subunit -
Dictyostelium discoideum AX4
Length = 615
Score = 206 bits (502), Expect = 6e-52
Identities = 103/200 (51%), Positives = 135/200 (67%)
Frame = +1
Query: 4 PVLDKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSP 183
P+L + HL KNVA D+A+K+ S+ LEGK L TF V VK + +++ RIL+P
Sbjct: 330 PILADFKLHLTKKNVAPDVADKIVQSIGTGLEGKKLATFQGVTSVVKQQMEDTITRILTP 389
Query: 184 KRRVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRA 363
KR +DILR+ + A + RPY + F GVNGVGKSTNLAK+C+WL N ++AACDTFR+
Sbjct: 390 KRNIDILRE-VQAVKGKRPYSIVFSGVNGVGKSTNLAKVCYWLTANGYKCMLAACDTFRS 448
Query: 364 GAVEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLI 543
GA+EQL+TH V L+E+GY KDAA +A +AI +A DT DVVLI
Sbjct: 449 GAIEQLKTHA-------------DRLNVHLFERGYSKDAASVAQDAIAFAKDTGYDVVLI 495
Query: 544 DTAGRMQDNEPLMRALAKLI 603
DT GRMQ+NEPLM+AL+KL+
Sbjct: 496 DTTGRMQNNEPLMKALSKLV 515
Score = 41.5 bits (93), Expect = 0.021
Identities = 19/40 (47%), Positives = 28/40 (70%)
Frame = +2
Query: 611 NEPDTVLFVGXALVXNEAVDQLVKFNQALADYSSXSIPHV 730
N D VLFVG ALV N+ VDQL KF+++L+ ++ + H+
Sbjct: 518 NNVDLVLFVGEALVGNDGVDQLTKFDKSLSLLANTTQTHI 557
>UniRef50_Q5CV65 Cluster: Srp101p GTpase. signal recognition
particle receptor alpha subunit; n=2;
Cryptosporidium|Rep: Srp101p GTpase. signal recognition
particle receptor alpha subunit - Cryptosporidium parvum
Iowa II
Length = 548
Score = 192 bits (469), Expect = 6e-48
Identities = 105/201 (52%), Positives = 135/201 (67%), Gaps = 2/201 (0%)
Frame = +1
Query: 10 LDKLRDHLIGKNVAADIANKLCDSVAIKLEG-KVLGTFDSVAKTVKATLTESLVRILSPK 186
L KL+ L+ KNVA++IA + DSV+ L G K G F + + +L +++ +ILSPK
Sbjct: 268 LQKLKSQLVEKNVASEIAQDIIDSVSNALVGVKTQGGFSKLDTILLNSLRDAITKILSPK 327
Query: 187 RRVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWL-IENDLSVLIAACDTFRA 363
+ D+L D L AKQ + Y + F GVNGVGKSTNLAK+C+ L + +L+VLI ACDTFRA
Sbjct: 328 KPTDVLSDALKAKQHSQVYSIVFLGVNGVGKSTNLAKVCYLLKNKGNLNVLIVACDTFRA 387
Query: 364 GAVEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLI 543
GA+EQL+TH V LYEKGYGKDAA +A +AI YA D DVVLI
Sbjct: 388 GAIEQLKTHANCLG-------------VQLYEKGYGKDAAMVAKDAISYAKDKGFDVVLI 434
Query: 544 DTAGRMQDNEPLMRALAKLIR 606
DTAGRMQDN PLM++LAKL++
Sbjct: 435 DTAGRMQDNVPLMKSLAKLVQ 455
Score = 43.2 bits (97), Expect = 0.007
Identities = 21/42 (50%), Positives = 27/42 (64%)
Frame = +2
Query: 608 VNEPDTVLFVGXALVXNEAVDQLVKFNQALADYSSXSIPHVI 733
VN P+ VLFVG ALV N+AV QL FN+ L ++ I +I
Sbjct: 456 VNNPNLVLFVGEALVGNDAVHQLQVFNKYLVEFGDRPIDGII 497
>UniRef50_A4RST6 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 525
Score = 190 bits (463), Expect = 3e-47
Identities = 100/200 (50%), Positives = 136/200 (68%)
Frame = +1
Query: 4 PVLDKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSP 183
P+ ++ L KNV +DIA+ L VA KL GK + TF S+A V +L ES++RILS
Sbjct: 239 PLTASIKHKLTQKNVTSDIADLLVTEVAQKLVGKKVSTFQSLASIVYRSLEESIIRILSS 298
Query: 184 KRRVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRA 363
+++D+L + A++ RP+V+AF GVNGVGKST+L+K+ WL + + SV++AACDTFRA
Sbjct: 299 AKKIDLLTEVGSARKSRRPFVIAFVGVNGVGKSTSLSKVVHWLSQQNFSVMVAACDTFRA 358
Query: 364 GAVEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLI 543
GAVEQLRTH + L+E+GY +D + IA +AI+ A+ DVV+I
Sbjct: 359 GAVEQLRTHCQRLD-------------CALFERGYERDPSVIAQQAIQQATRQGIDVVMI 405
Query: 544 DTAGRMQDNEPLMRALAKLI 603
DTAGRMQDNEPLMRALAKL+
Sbjct: 406 DTAGRMQDNEPLMRALAKLL 425
Score = 36.7 bits (81), Expect = 0.61
Identities = 19/44 (43%), Positives = 24/44 (54%)
Frame = +2
Query: 605 AVNEPDTVLFVGXALVXNEAVDQLVKFNQALADYSSXSIPHVID 736
+VN PD LFVG ALV N+ V Q+++F L VID
Sbjct: 426 SVNLPDLTLFVGEALVGNDGVSQILQFEHRLQALMQTEKKCVID 469
>UniRef50_A5K2S1 Cluster: Signal recognition particle receptor,
putative; n=5; Plasmodium|Rep: Signal recognition
particle receptor, putative - Plasmodium vivax
Length = 602
Score = 190 bits (463), Expect = 3e-47
Identities = 107/201 (53%), Positives = 131/201 (65%), Gaps = 2/201 (0%)
Frame = +1
Query: 7 VLDKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFD-SVAKTVKATLTESLVRILSP 183
VL +++ L+ KNVA I + L + + L GK F +V KTV L+E++ IL P
Sbjct: 318 VLQGVKNKLLSKNVAVGICDMLIEKMKGNLIGKKKTLFSMNVKKTVSTVLSETIQSILIP 377
Query: 184 KRRVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWL-IENDLSVLIAACDTFR 360
K+ VD+LR L AK G+ Y + F GVNGVGKSTNLAK+C++L + +L ++IAACDTFR
Sbjct: 378 KQSVDVLRAALEAKSIGKLYSIVFLGVNGVGKSTNLAKVCYYLKTKGNLKIMIAACDTFR 437
Query: 361 AGAVEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVL 540
AGAVEQLRTH V LYEKGYGKDAA IA EAI YA V+L
Sbjct: 438 AGAVEQLRTHANCLD-------------VFLYEKGYGKDAAAIAKEAIAYAKKENFHVIL 484
Query: 541 IDTAGRMQDNEPLMRALAKLI 603
IDTAGRMQDNEPLMR+L KLI
Sbjct: 485 IDTAGRMQDNEPLMRSLGKLI 505
Score = 52.4 bits (120), Expect = 1e-05
Identities = 24/43 (55%), Positives = 29/43 (67%)
Frame = +2
Query: 608 VNEPDTVLFVGXALVXNEAVDQLVKFNQALADYSSXSIPHVID 736
+N PD +LFVG ALV N+A+DQL KFNQAL D + ID
Sbjct: 507 INNPDFILFVGEALVGNDAIDQLKKFNQALTDATCNGNKRTID 549
>UniRef50_Q01F74 Cluster: SrrA undefined product; n=1; Ostreococcus
tauri|Rep: SrrA undefined product - Ostreococcus tauri
Length = 502
Score = 188 bits (457), Expect = 2e-46
Identities = 96/201 (47%), Positives = 137/201 (68%)
Frame = +1
Query: 1 RPVLDKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILS 180
R ++ + L+ +NV +++++ L D V+ KL GK + TF+SV + +L E+++R+LS
Sbjct: 218 RSIMFSFKKKLMKRNVTSEVSDMLVDEVSRKLIGKEITTFESVMTIIHRSLEEAVIRVLS 277
Query: 181 PKRRVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFR 360
R+VDIL D ++ + RPYV+ F GVNGVGKST+L+K+ +WL + + SV++AACDTFR
Sbjct: 278 SARKVDILHD-INRVGKSRPYVITFVGVNGVGKSTSLSKLVYWLTQQNFSVMVAACDTFR 336
Query: 361 AGAVEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVL 540
AGAVEQLRTH LYE+GY +D + IA +AI+ A+ DVV+
Sbjct: 337 AGAVEQLRTHCHRLG-------------CALYERGYERDPSTIAQQAIQQATRQNIDVVM 383
Query: 541 IDTAGRMQDNEPLMRALAKLI 603
IDTAGRMQDNEPLMR+LAKL+
Sbjct: 384 IDTAGRMQDNEPLMRSLAKLL 404
Score = 37.5 bits (83), Expect = 0.35
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +2
Query: 608 VNEPDTVLFVGXALVXNEAVDQLVKFNQALADYSSXS 718
VN+PD FVG ALV N+ V Q+++F + L + + S
Sbjct: 406 VNKPDFTFFVGDALVGNDGVSQILQFERRLQELTELS 442
>UniRef50_Q4Q161 Cluster: Signal recognition particle receptor like
protein, putative; n=5; Trypanosomatidae|Rep: Signal
recognition particle receptor like protein, putative -
Leishmania major
Length = 605
Score = 186 bits (454), Expect = 4e-46
Identities = 102/201 (50%), Positives = 130/201 (64%)
Frame = +1
Query: 1 RPVLDKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILS 180
+ ++ LR+ LI KNVA ++A +C SV L GK LGTFDS+ KTV+ + SL RIL
Sbjct: 319 KKIIPDLREKLIVKNVAVEVAEHVCKSVEASLAGKRLGTFDSLYKTVEDAMMASLRRILQ 378
Query: 181 PKRRVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFR 360
PK V++LR+ AK G+PY + CGVNGVGKST+LAKI +WL +N SVL+AA DTFR
Sbjct: 379 PKCEVNLLRNVAAAKAAGKPYSIVLCGVNGVGKSTSLAKIAYWLQQNGNSVLLAAGDTFR 438
Query: 361 AGAVEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVL 540
GAVEQL H R V +++ GYG D + +A A+ AS DVV+
Sbjct: 439 HGAVEQLGVHGRCLG-------------VPIFQLGYGTDPSTVAAAAMAQASKQHIDVVM 485
Query: 541 IDTAGRMQDNEPLMRALAKLI 603
+DTAGRMQD+E MRALAKLI
Sbjct: 486 VDTAGRMQDHESRMRALAKLI 506
Score = 48.8 bits (111), Expect = 1e-04
Identities = 21/33 (63%), Positives = 25/33 (75%)
Frame = +2
Query: 611 NEPDTVLFVGXALVXNEAVDQLVKFNQALADYS 709
N+PD VLFVG ALV N +DQL KFNQ L D++
Sbjct: 509 NQPDLVLFVGEALVGNNGIDQLRKFNQCLVDFA 541
>UniRef50_Q2U958 Cluster: Signal recognition particle receptor; n=2;
Aspergillus|Rep: Signal recognition particle receptor -
Aspergillus oryzae
Length = 607
Score = 185 bits (451), Expect = 9e-46
Identities = 98/202 (48%), Positives = 128/202 (63%), Gaps = 6/202 (2%)
Frame = +1
Query: 10 LDKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSPKR 189
L + DHL+ KNVA + A +LCD V +L GK G F SV ++ + SL +IL+P
Sbjct: 315 LKAMEDHLLKKNVAREAAVRLCDGVQRELVGKKTGNFQSVDAALRQAMESSLRKILTPTS 374
Query: 190 RVDILRDC------LHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACD 351
+D+LR+ +Q RPYV++ GVNGVGKSTNL KIC++L++N+ VLIAACD
Sbjct: 375 SLDLLREIDTVTSPTSKQQSPRPYVISIVGVNGVGKSTNLGKICYFLLQNNYRVLIAACD 434
Query: 352 TFRAGAVEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTD 531
TFR+GAVEQLR H R V LYEKGYGKDAA +A +A+ Y + K D
Sbjct: 435 TFRSGAVEQLRVHAR---NLKELSARENVGQVELYEKGYGKDAANVAKDAVEYGAANKFD 491
Query: 532 VVLIDTAGRMQDNEPLMRALAK 597
VVLIDTAGR +++ LM +L K
Sbjct: 492 VVLIDTAGRRHNDQRLMSSLEK 513
>UniRef50_Q22T92 Cluster: SRP54-type protein, GTPase domain
containing protein; n=2; Oligohymenophorea|Rep:
SRP54-type protein, GTPase domain containing protein -
Tetrahymena thermophila SB210
Length = 618
Score = 185 bits (450), Expect = 1e-45
Identities = 90/201 (44%), Positives = 132/201 (65%)
Frame = +1
Query: 1 RPVLDKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILS 180
+P+LDK ++ L+ KNV IA +LCDS+ L + KTVK +L +++ +IL+
Sbjct: 333 QPILDKFKEQLMNKNVGEQIAQQLCDSIKKNLINTQAKALTLLNKTVKESLQDAISKILT 392
Query: 181 PKRRVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFR 360
PKR +DI+ + + ++++G+PY++ F GVNGVGKSTNLAK+ + + SV+ AACD FR
Sbjct: 393 PKRNIDIIAEAMRSREKGKPYIITFIGVNGVGKSTNLAKVAYLFKKEGFSVMFAACDNFR 452
Query: 361 AGAVEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVL 540
AGAVEQ++TH R + ++++GY + A IA +AIR A K DV+L
Sbjct: 453 AGAVEQIKTHGRCLE-------------IPVFDRGYKDEPADIAFQAIREAQAKKVDVLL 499
Query: 541 IDTAGRMQDNEPLMRALAKLI 603
IDTAGRMQDNEPLM+ L+ L+
Sbjct: 500 IDTAGRMQDNEPLMKQLSTLV 520
Score = 46.4 bits (105), Expect = 8e-04
Identities = 19/33 (57%), Positives = 25/33 (75%)
Frame = +2
Query: 611 NEPDTVLFVGXALVXNEAVDQLVKFNQALADYS 709
N PD ++F+G ALV N+ DQL+KFN+AL D S
Sbjct: 523 NNPDLIVFIGEALVGNDGTDQLMKFNKALIDLS 555
>UniRef50_A1CMF5 Cluster: Signal sequence receptor alpha subunit,
putative; n=16; Pezizomycotina|Rep: Signal sequence
receptor alpha subunit, putative - Aspergillus clavatus
Length = 654
Score = 182 bits (442), Expect = 1e-44
Identities = 96/205 (46%), Positives = 130/205 (63%), Gaps = 6/205 (2%)
Frame = +1
Query: 10 LDKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSPKR 189
L + DHL+ KNVA + A +LC+ V +L GK G F SV +++ + SL +IL+P
Sbjct: 362 LKAMEDHLLKKNVAREAAVRLCEGVQRELVGKKTGNFQSVDAALRSAMESSLRKILTPTS 421
Query: 190 RVDILRDCLHAK------QEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACD 351
+D+LR+ + Q RPYV++ GVNGVGKSTNL+KIC++L++N+ VLIAACD
Sbjct: 422 SLDLLREIETVRSPSSKGQAPRPYVISIVGVNGVGKSTNLSKICYFLLQNNYRVLIAACD 481
Query: 352 TFRAGAVEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTD 531
TFR+GAVEQLR H R V LYEKGYGKDAA +A +A+ Y + D
Sbjct: 482 TFRSGAVEQLRVHARNLKELSARETAGE---VELYEKGYGKDAANVAKDAVEYGAANDFD 538
Query: 532 VVLIDTAGRMQDNEPLMRALAKLIR 606
VVLIDTAGR +++ LM +L K +
Sbjct: 539 VVLIDTAGRRHNDQRLMSSLEKFAK 563
>UniRef50_A2EHQ0 Cluster: SRP54-type protein, putative; n=1;
Trichomonas vaginalis G3|Rep: SRP54-type protein,
putative - Trichomonas vaginalis G3
Length = 533
Score = 180 bits (437), Expect = 4e-44
Identities = 95/201 (47%), Positives = 130/201 (64%), Gaps = 1/201 (0%)
Frame = +1
Query: 4 PVLDKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSP 183
P L + HLI KNVA+ IA++L +V KL+G GTF SV V ATL E + RIL+P
Sbjct: 246 PFLKEFESHLISKNVASAIAHELTTAVGQKLDGTKCGTFQSVKTVVMATLREQIERILTP 305
Query: 184 KRRVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRA 363
R +DI+RD A+++G+PYV +F GVNGVGKST LAK+ + + +D VLI CDTFR+
Sbjct: 306 HRSIDIIRDIQLARKQGKPYVFSFIGVNGVGKSTTLAKVAYLMKSHDFKVLIVGCDTFRS 365
Query: 364 GAVEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYG-KDAAGIAMEAIRYASDTKTDVVL 540
GAV+QL H + L+++G +D +A +AI+YA D K DVVL
Sbjct: 366 GAVKQLAEHAERLG-------------IELFQRGNDRRDPVPVAKDAIQYAIDKKIDVVL 412
Query: 541 IDTAGRMQDNEPLMRALAKLI 603
+DTAGRMQ++E LM+ +A+LI
Sbjct: 413 VDTAGRMQNSEGLMKQIARLI 433
>UniRef50_A0E7D9 Cluster: Chromosome undetermined scaffold_81, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_81,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 585
Score = 175 bits (427), Expect = 7e-43
Identities = 92/200 (46%), Positives = 127/200 (63%)
Frame = +1
Query: 4 PVLDKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSP 183
PVLD ++ L+ KNVA +IA KL DS+ L F S+ +V+ + +L RIL+P
Sbjct: 301 PVLDDFKNALMQKNVAEEIAQKLVDSIKTNLLATKTKAFQSIRTSVQEAMKSTLTRILTP 360
Query: 184 KRRVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRA 363
R +DI+ + L AK++ +PYV+ GVNGVGKST LAK+ + S++IAACD FRA
Sbjct: 361 NRHIDIIAEALRAKEKQKPYVIVIIGVNGVGKSTTLAKLGYLFKSQGFSLMIAACDNFRA 420
Query: 364 GAVEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLI 543
GAVEQL+TH + + +Y++GY D IA +AIR A+ K DVVL+
Sbjct: 421 GAVEQLKTHGQCLG-------------IPVYDRGYKDDPPEIAYQAIREATIKKIDVVLV 467
Query: 544 DTAGRMQDNEPLMRALAKLI 603
DTAGRMQ NEPLMRAL++++
Sbjct: 468 DTAGRMQHNEPLMRALSRIV 487
Score = 46.4 bits (105), Expect = 8e-04
Identities = 21/30 (70%), Positives = 24/30 (80%)
Frame = +2
Query: 608 VNEPDTVLFVGXALVXNEAVDQLVKFNQAL 697
+N PD VLFVG ALV N+ VDQLV FN+AL
Sbjct: 489 MNNPDLVLFVGEALVGNDGVDQLVNFNKAL 518
>UniRef50_A7ANF7 Cluster: SRP54-type protein, GTPase domain
containing protein; n=1; Babesia bovis|Rep: SRP54-type
protein, GTPase domain containing protein - Babesia
bovis
Length = 566
Score = 173 bits (422), Expect = 3e-42
Identities = 94/198 (47%), Positives = 126/198 (63%)
Frame = +1
Query: 10 LDKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSPKR 189
L +L+ +L KNVA DI+ +CDS++ L GK + SV+ TV+ L +++ RIL+PK
Sbjct: 281 LKELKLNLNTKNVANDISTMICDSISAGLVGKKTASLKSVSATVREALEDAVRRILTPKE 340
Query: 190 RVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGA 369
+++LR+ AK G Y + F GVNGVGKST+LAK+ + L N V++ ACDTFR+GA
Sbjct: 341 PINLLRNVSEAKARGEVYSVLFLGVNGVGKSTSLAKVTYLLKCNGFKVMLIACDTFRSGA 400
Query: 370 VEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDT 549
VEQL+ H V L+E+GYGKD + I E +++A D VLIDT
Sbjct: 401 VEQLKIHADKLG-------------VELFERGYGKDPSAICREGLKHARANSYDAVLIDT 447
Query: 550 AGRMQDNEPLMRALAKLI 603
AGRMQDNEPLM ALAKLI
Sbjct: 448 AGRMQDNEPLMTALAKLI 465
Score = 45.2 bits (102), Expect = 0.002
Identities = 21/30 (70%), Positives = 24/30 (80%)
Frame = +2
Query: 608 VNEPDTVLFVGXALVXNEAVDQLVKFNQAL 697
VN P +LFVG ALV N+AVDQL KFNQA+
Sbjct: 467 VNNPHLLLFVGEALVGNDAVDQLRKFNQAI 496
>UniRef50_O43032 Cluster: Signal recognition particle receptor alpha
subunit Srp101; n=1; Schizosaccharomyces pombe|Rep:
Signal recognition particle receptor alpha subunit
Srp101 - Schizosaccharomyces pombe (Fission yeast)
Length = 547
Score = 172 bits (419), Expect = 7e-42
Identities = 85/205 (41%), Positives = 124/205 (60%), Gaps = 1/205 (0%)
Frame = +1
Query: 4 PVLDKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSP 183
P+L ++++HL KNVA IA +LC+SV L K +G+FD+V TV + L +IL+P
Sbjct: 263 PILKQMQEHLTKKNVANSIALELCESVKASLINKKVGSFDTVKNTVNKAFRDRLTQILTP 322
Query: 184 KRRVDILRDCLHA-KQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFR 360
+D+L K E RPY ++ GVNGVGKST LAKI +WL+ N+ +L+AACDTFR
Sbjct: 323 STSLDLLHSIRSVRKNENRPYTISLIGVNGVGKSTTLAKIAYWLLSNNFRILVAACDTFR 382
Query: 361 AGAVEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVL 540
+GA+EQL H + + L+ +GYGKD++ + A+ YA DV+L
Sbjct: 383 SGAIEQLGVHVK-------NLQSLKGSSIELFAQGYGKDSSFVVKNAVEYAKQNSFDVIL 435
Query: 541 IDTAGRMQDNEPLMRALAKLIRGQR 615
IDTAGR +++ LM +L K + +
Sbjct: 436 IDTAGRRHNDQRLMGSLEKFTKATK 460
>UniRef50_Q4N567 Cluster: Signal recognition particle receptor alpha
subunit, putative; n=2; Theileria|Rep: Signal
recognition particle receptor alpha subunit, putative -
Theileria parva
Length = 579
Score = 171 bits (416), Expect = 2e-41
Identities = 94/195 (48%), Positives = 121/195 (62%)
Frame = +1
Query: 19 LRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSPKRRVD 198
L D L KNVA DI + S+ L GK + S++ TV+ L S+ RIL+PK ++
Sbjct: 304 LTDKLRSKNVAGDICEMIGRSIVTHLVGKRTESLRSLSSTVRTALESSVRRILTPKDPIN 363
Query: 199 ILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAVEQ 378
+++ H G Y + F GVNGVGKST+LAK+ + L N VL+ ACDTFR+GAVEQ
Sbjct: 364 LIKQVKHTVANGGIYSIVFLGVNGVGKSTSLAKVAYLLKSNGFKVLVVACDTFRSGAVEQ 423
Query: 379 LRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGR 558
L+THT + L+E+GYGKD A IA E I++A + + DVVLIDTAGR
Sbjct: 424 LKTHTTNLG-------------LHLFERGYGKDPAQIAKEGIKHAVNNQFDVVLIDTAGR 470
Query: 559 MQDNEPLMRALAKLI 603
MQDNEPLM AL KLI
Sbjct: 471 MQDNEPLMAALTKLI 485
Score = 44.0 bits (99), Expect = 0.004
Identities = 20/38 (52%), Positives = 27/38 (71%)
Frame = +2
Query: 608 VNEPDTVLFVGXALVXNEAVDQLVKFNQALADYSSXSI 721
VN P+ ++FVG ALV N+AVDQL KFN A+ + +I
Sbjct: 487 VNNPNLIIFVGEALVGNDAVDQLKKFNLAIGKGTDRTI 524
>UniRef50_UPI0000499FED Cluster: Signal recognition particle
receptor alpha subunit; n=1; Entamoeba histolytica
HM-1:IMSS|Rep: Signal recognition particle receptor
alpha subunit - Entamoeba histolytica HM-1:IMSS
Length = 488
Score = 160 bits (389), Expect = 3e-38
Identities = 86/202 (42%), Positives = 125/202 (61%)
Frame = +1
Query: 13 DKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSPKRR 192
+K+ LI KNV ++IA ++ +++ L GK + TF +++ TV +TE L RI++P
Sbjct: 208 EKIEKMLIEKNVNSEIAAQIKNNIQTLLNGKKVDTF-TLSGTVIQGVTEVLTRIMTPTSP 266
Query: 193 VDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAV 372
+D+ ++ K G Y M F GVNGVGKST+L+K+ WL + V+IAACDTFRAGAV
Sbjct: 267 IDVAKEISEKKANGEVYTMVFLGVNGVGKSTSLSKMACWLTSLNYKVMIAACDTFRAGAV 326
Query: 373 EQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTA 552
+QL H + +TLYEKGY D + IA A++ A + DV+L+DTA
Sbjct: 327 DQLAVHAQKLG-------------ITLYEKGYDTDPSAIARNALKRAKEDGYDVLLVDTA 373
Query: 553 GRMQDNEPLMRALAKLIRGQRT 618
GRMQ N+ LM+A+AKL+ +T
Sbjct: 374 GRMQGNDALMKAIAKLVHSAQT 395
Score = 38.3 bits (85), Expect = 0.20
Identities = 17/32 (53%), Positives = 23/32 (71%)
Frame = +2
Query: 614 EPDTVLFVGXALVXNEAVDQLVKFNQALADYS 709
+ D VLFV ALV N+AV+QL FN+ + DY+
Sbjct: 394 QTDLVLFVAEALVGNDAVNQLTTFNRYIIDYA 425
>UniRef50_Q9Y7B0 Cluster: Signal sequence receptor alpha subunit;
n=1; Yarrowia lipolytica|Rep: Signal sequence receptor
alpha subunit - Yarrowia lipolytica (Candida lipolytica)
Length = 557
Score = 160 bits (388), Expect = 4e-38
Identities = 87/205 (42%), Positives = 123/205 (60%), Gaps = 2/205 (0%)
Frame = +1
Query: 7 VLDKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSPK 186
V K+ + L+ KNVA ++A LCD V+ L G ++ +V +TV+ + ++L +IL+P
Sbjct: 268 VTAKVEEQLMKKNVAKEVAVHLCDQVSRSLVGCTTNSWTTVEQTVQQAMADALRKILTPS 327
Query: 187 RRVDILRDCLHAKQ--EGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFR 360
+D+L + K+ GRPYV++ GVNGVGKSTNL+KI FWL++N + +L+AACDTFR
Sbjct: 328 ASLDLLHEVQRHKKLGGGRPYVISVVGVNGVGKSTNLSKIGFWLLQNKMRLLVAACDTFR 387
Query: 361 AGAVEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVL 540
+GAVEQL H V L+ +GYGKD A A +A+ Y DVVL
Sbjct: 388 SGAVEQLGVHVNRLSELAGRQGTGE---VELFAQGYGKDPAHTAEKAVEYGEKHGFDVVL 444
Query: 541 IDTAGRMQDNEPLMRALAKLIRGQR 615
IDTAGR ++ LM L K + R
Sbjct: 445 IDTAGRRHSDKRLMGDLEKFAKRAR 469
>UniRef50_A4F312 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 450
Score = 151 bits (367), Expect = 1e-35
Identities = 71/113 (62%), Positives = 90/113 (79%)
Frame = +1
Query: 4 PVLDKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSP 183
P+++K+R++LI KNVA++ A K+C SV KLEGKV+ F VA+ VK + ESLV++L+P
Sbjct: 334 PLIEKMRENLILKNVASEPAEKICQSVVSKLEGKVVNNFSRVAQEVKTAVRESLVQLLTP 393
Query: 184 KRRVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIA 342
K RVDILRD + AK++GRPYV+ FCGVNGVGKSTNLAKI FWL EN VLIA
Sbjct: 394 KHRVDILRDVIEAKRDGRPYVIVFCGVNGVGKSTNLAKITFWLTENKHRVLIA 446
>UniRef50_A3LNS4 Cluster: GTP binding signal recognition particle
receptor; n=6; Saccharomycetales|Rep: GTP binding signal
recognition particle receptor - Pichia stipitis (Yeast)
Length = 545
Score = 149 bits (360), Expect = 1e-34
Identities = 85/199 (42%), Positives = 110/199 (55%), Gaps = 2/199 (1%)
Frame = +1
Query: 7 VLDKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSPK 186
V K D LI KN+A + A + D + KL + T K TLTE L +IL+P
Sbjct: 258 VSKKFNDQLISKNIAPNTAKIIIDKIRDKLGNQRNVTL----ALYKQTLTEELTKILTPN 313
Query: 187 RRVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAG 366
D+L D RPYV++ GVNGVGKSTNLAK+ +W ++N+L+VLI ACDTFR+G
Sbjct: 314 VSTDLLYDIKRNSTNPRPYVISVVGVNGVGKSTNLAKLAYWFLQNNLNVLICACDTFRSG 373
Query: 367 AVEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGK--DAAGIAMEAIRYASDTKTDVVL 540
AVEQL+ H + ++EKGYG A AI++A+ K D+VL
Sbjct: 374 AVEQLKVHVN-NLQRLNSQSSNGENKIDIFEKGYGSGDHVVTTAKMAIQHAASEKFDIVL 432
Query: 541 IDTAGRMQDNEPLMRALAK 597
IDTAGR N LM L K
Sbjct: 433 IDTAGRTHSNTKLMAPLKK 451
Score = 32.7 bits (71), Expect = 9.9
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +2
Query: 617 PDTVLFVGXALVXNEAVDQLVKFNQALADYSS 712
PD ++ VG ALV ++V+Q + FN A + S
Sbjct: 458 PDKIIMVGEALVGTDSVEQAINFNNAFGNKRS 489
>UniRef50_P32916 Cluster: Signal recognition particle receptor
subunit alpha homolog; n=6; Saccharomycetales|Rep:
Signal recognition particle receptor subunit alpha
homolog - Saccharomyces cerevisiae (Baker's yeast)
Length = 621
Score = 149 bits (360), Expect = 1e-34
Identities = 89/214 (41%), Positives = 121/214 (56%), Gaps = 17/214 (7%)
Frame = +1
Query: 1 RPVLDKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILS 180
+ VL+KL LI KNVA + A+ L V+ L G + SV T + +LT++L +IL+
Sbjct: 312 KSVLEKLTQQLITKNVAPEAADYLTQQVSHDLVGSKTANWTSVENTARESLTKALTQILT 371
Query: 181 PKRRVDILRDCLHAK----QEGR--PYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIA 342
P VD+LR+ + +EG+ PYV + GVNGVGKSTNL+K+ FWL++N+ VLI
Sbjct: 372 PGVSVDLLREIQSKRSKKDEEGKCDPYVFSIVGVNGVGKSTNLSKLAFWLLQNNFKVLIV 431
Query: 343 ACDTFRAGAVEQLRTHTR---------XXXXXXXXXXXXXXXMVTLYEKGYGKD--AAGI 489
ACDTFR+GAVEQLR H V L+E GYG I
Sbjct: 432 ACDTFRSGAVEQLRVHVENLAQLMDDSHVRGSKNKRGKTGNDYVELFEAGYGGSDLVTKI 491
Query: 490 AMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRAL 591
A +AI+Y+ D D+VL+DTAGR ++ LM L
Sbjct: 492 AKQAIKYSRDQNFDIVLMDTAGRRHNDPTLMSPL 525
>UniRef50_Q8SR80 Cluster: SIGNAL RECOGNITION PARTICLE RECEPTOR ALPHA
SUBUNIT; n=1; Encephalitozoon cuniculi|Rep: SIGNAL
RECOGNITION PARTICLE RECEPTOR ALPHA SUBUNIT -
Encephalitozoon cuniculi
Length = 425
Score = 145 bits (351), Expect = 1e-33
Identities = 85/205 (41%), Positives = 117/205 (57%), Gaps = 1/205 (0%)
Frame = +1
Query: 13 DKLRDHLIGKNVAADIANKLCDSVAIKL-EGKVLGTFDSVAKTVKATLTESLVRILSPKR 189
DK+ HLI KNV+ I L + + +L E ++ + K A + L+ + +
Sbjct: 146 DKMTTHLISKNVSYQITKTLVEDIMSELAEEEIKSVSEKTFKEKMANVLSKLIPSVDHEE 205
Query: 190 RVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGA 369
+D +R +G + + F GVNGVGKST+LAKIC+WL++N L V IAACDTFRAGA
Sbjct: 206 MLDRIRG-----HKG-VFSICFVGVNGVGKSTSLAKICYWLLQNKLRVYIAACDTFRAGA 259
Query: 370 VEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDT 549
+EQL+TH +V YEKGYGKD A +A AI+ A DV+LIDT
Sbjct: 260 IEQLKTHVE--------RFKLGGHLVGFYEKGYGKDDASVARCAIQEAQHEGYDVILIDT 311
Query: 550 AGRMQDNEPLMRALAKLIRGQRTRH 624
AGRM + + LM +L KL++ R H
Sbjct: 312 AGRMHNKKNLMASLTKLMKINRPDH 336
Score = 37.5 bits (83), Expect = 0.35
Identities = 13/32 (40%), Positives = 25/32 (78%)
Frame = +2
Query: 608 VNEPDTVLFVGXALVXNEAVDQLVKFNQALAD 703
+N PD +++VG ALV ++++D + +FN+A+ D
Sbjct: 331 INRPDHIIYVGEALVGSDSLDHIREFNKAIRD 362
>UniRef50_Q7R237 Cluster: GLP_630_47100_45385; n=2; Giardia
intestinalis|Rep: GLP_630_47100_45385 - Giardia lamblia
ATCC 50803
Length = 571
Score = 136 bits (329), Expect = 5e-31
Identities = 80/205 (39%), Positives = 117/205 (57%), Gaps = 6/205 (2%)
Frame = +1
Query: 7 VLDKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSPK 186
+L LR LI +NVA+D+A++L V+ LEG+ +G F V L +S+ +I+ +
Sbjct: 285 LLSSLRQALINQNVASDVADELLKGVSASLEGEKVGLFSRTKSVVIQALKDSIRKIVQFE 344
Query: 187 RRVDILRDCLHAKQE------GRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAAC 348
R +++ L +K+E RPYV+ GVNGVGK+T++AK+ + N L L+ AC
Sbjct: 345 DRF-LMKRILASKEERAAGQRSRPYVICMTGVNGVGKTTSIAKLLYIFKNNGLRSLVCAC 403
Query: 349 DTFRAGAVEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKT 528
D+FR+GAVEQL+ H TLY +GYGK+A+ IA I+ A
Sbjct: 404 DSFRSGAVEQLQEHCNRLG-------------ATLYSQGYGKNASAIAKYGIKEAESLNY 450
Query: 529 DVVLIDTAGRMQDNEPLMRALAKLI 603
D+ LIDT GR +N PLM+AL L+
Sbjct: 451 DICLIDTTGRQYNNGPLMQALGALV 475
Score = 41.5 bits (93), Expect = 0.021
Identities = 19/34 (55%), Positives = 24/34 (70%)
Frame = +2
Query: 611 NEPDTVLFVGXALVXNEAVDQLVKFNQALADYSS 712
N PD VLFVG AL NE V+QL +F+ AL Y++
Sbjct: 478 NAPDVVLFVGEALTGNEGVEQLKQFDCALKSYTN 511
>UniRef50_A7DRN3 Cluster: Signal recognition particle-docking
protein FtsY; n=1; Candidatus Nitrosopumilus maritimus
SCM1|Rep: Signal recognition particle-docking protein
FtsY - Candidatus Nitrosopumilus maritimus SCM1
Length = 513
Score = 127 bits (306), Expect = 3e-28
Identities = 72/200 (36%), Positives = 112/200 (56%)
Frame = +1
Query: 7 VLDKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSPK 186
+L +L L+ +VA ++ + + D + KL G + + + K VK +L S+
Sbjct: 29 ILFELEISLLESDVATEVIDSIKDDLKEKLVGSKVDKKE-IEKFVKDSLISSISAHFDAA 87
Query: 187 RRVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAG 366
+D+ K++G+P+++ F G+NG GK+T+LAK+ L + SV++AA DTFRAG
Sbjct: 88 GEIDLFGKINEKKEQGQPFLILFLGINGTGKTTSLAKVAHMLQQEKYSVVVAAADTFRAG 147
Query: 367 AVEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLID 546
A+EQLR HT + L + Y D A +A +A+ YA KTDVVLID
Sbjct: 148 AIEQLREHTNRLN-------------LKLVAQNYNSDPAAVARDAVLYAKSHKTDVVLID 194
Query: 547 TAGRMQDNEPLMRALAKLIR 606
TAGRMQ +E LM+ + K+ +
Sbjct: 195 TAGRMQTSENLMQQIEKITK 214
>UniRef50_Q8U051 Cluster: Signal recognition particle receptor; n=5;
Euryarchaeota|Rep: Signal recognition particle receptor
- Pyrococcus furiosus
Length = 322
Score = 125 bits (301), Expect = 1e-27
Identities = 73/199 (36%), Positives = 110/199 (55%)
Frame = +1
Query: 10 LDKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSPKR 189
LD+L L+ +VA ++ + L + + KL GK + K ++ + E++ IL R
Sbjct: 50 LDELEIDLLEADVALEVVDALREKIKQKLVGKKVRIGTDKGKIIEEAVKEAVSEILETSR 109
Query: 190 RVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGA 369
R+D++ + A+ +PYV+ F G NG GK+T +AK+ WL + SV+IAA DTFRAGA
Sbjct: 110 RIDLIEEIRKAE---KPYVIMFVGFNGSGKTTTIAKLANWLKNHGFSVVIAASDTFRAGA 166
Query: 370 VEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDT 549
+EQL H + V + + YG D A +A +AI++A DVVLIDT
Sbjct: 167 IEQLEEHAKRIG-------------VKVIKHSYGADPAAVAYDAIQHAKARGIDVVLIDT 213
Query: 550 AGRMQDNEPLMRALAKLIR 606
AGR + N LM + K+ R
Sbjct: 214 AGRSETNRNLMDEMKKIAR 232
Score = 32.7 bits (71), Expect = 9.9
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +2
Query: 608 VNEPDTVLFVGXALVXNEAVDQLVKFNQAL 697
V +P+ V+FVG AL N V+Q +FN+A+
Sbjct: 233 VTKPNLVIFVGDALAGNAIVEQARQFNEAV 262
>UniRef50_A0RUF0 Cluster: Signal recognition particle GTPase; n=1;
Cenarchaeum symbiosum|Rep: Signal recognition particle
GTPase - Cenarchaeum symbiosum
Length = 422
Score = 122 bits (295), Expect = 7e-27
Identities = 81/205 (39%), Positives = 123/205 (60%), Gaps = 5/205 (2%)
Frame = +1
Query: 7 VLDKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKAT-LTESLVRILSP 183
+LD+L L+ +VAA++A DS+ L+G+++GT SV K V + ESL+ I+S
Sbjct: 1 MLDELEISLLESDVAAEVA----DSIKEDLKGRLVGT--SVDKHVIGEHVRESLIGIISD 54
Query: 184 ----KRRVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACD 351
VD+L + + AK++ PY++ F G+NG GK+T++AKI L ++ LSV++AA D
Sbjct: 55 LFDGAGAVDLL-ERIRAKKDD-PYIIVFVGINGTGKTTSVAKIAHMLRDSKLSVVLAAAD 112
Query: 352 TFRAGAVEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTD 531
TFRAGA+EQLR H + + + + YG D A +A +A+ YA D
Sbjct: 113 TFRAGAIEQLREHAKRLN-------------LKIVAQNYGSDPAAVARDAVLYARSHGVD 159
Query: 532 VVLIDTAGRMQDNEPLMRALAKLIR 606
VL+DTAGRMQ ++ LM + K+IR
Sbjct: 160 CVLVDTAGRMQTSKNLMEQIEKIIR 184
>UniRef50_P27414 Cluster: Probable signal recognition particle
protein; n=8; Sulfolobaceae|Rep: Probable signal
recognition particle protein - Sulfolobus acidocaldarius
Length = 369
Score = 118 bits (284), Expect = 2e-25
Identities = 71/200 (35%), Positives = 111/200 (55%)
Frame = +1
Query: 7 VLDKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSPK 186
V+++LR L+ +V+ ++ K+ + + L GK + + V + V TL +S+ IL+
Sbjct: 98 VIEELRFQLLDSDVSYEVTEKILEDLKNNLIGKKVSRREEVEEIVINTLKKSITEILTKN 157
Query: 187 RRVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAG 366
++ D++ + + +P+V+ F GVNGVGK+T +AK+ L +N+LS +IAA DTFRA
Sbjct: 158 QKTDLIEKIRSSGK--KPFVIIFFGVNGVGKTTTIAKVVNMLKKNNLSTIIAASDTFRAA 215
Query: 367 AVEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLID 546
A EQL H V L YG D A +A +AI +A DVVLID
Sbjct: 216 AQEQLAYHASKLE-------------VQLIRGKYGADPASVAFDAISFAKSRNIDVVLID 262
Query: 547 TAGRMQDNEPLMRALAKLIR 606
TAGRM + L+ L +++R
Sbjct: 263 TAGRMHIDSDLVEELKRVLR 282
>UniRef50_Q57739 Cluster: Probable signal recognition particle
protein MJ0291; n=7; Euryarchaeota|Rep: Probable signal
recognition particle protein MJ0291 - Methanococcus
jannaschii
Length = 409
Score = 112 bits (270), Expect = 8e-24
Identities = 68/200 (34%), Positives = 110/200 (55%)
Frame = +1
Query: 7 VLDKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSPK 186
VL++L L+ +VA ++ KL +++ +L G+ + D+V + + ++ ILS +
Sbjct: 126 VLEELEIALLEADVALEVVEKLIENIKNELVGRKISPDDNVEEITINAVKNAIKNILS-Q 184
Query: 187 RRVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAG 366
++DI K EG+P V+ F G+NG GK+T +AK+ + L + SV++AA DTFRAG
Sbjct: 185 EKIDIEEIIKKNKAEGKPTVIVFVGINGTGKTTTIAKLAYKLKQKGYSVVLAAGDTFRAG 244
Query: 367 AVEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLID 546
A+EQL H + V + + G D+A + +AI++A DVVL D
Sbjct: 245 AIEQLEQHAKNVG-------------VKVIKHKPGADSAAVIYDAIQHAKARGIDVVLAD 291
Query: 547 TAGRMQDNEPLMRALAKLIR 606
TAGR N LM + K++R
Sbjct: 292 TAGRQATNVNLMEEIKKVVR 311
Score = 35.9 bits (79), Expect = 1.1
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = +2
Query: 608 VNEPDTVLFVGXALVXNEAVDQLVKFNQAL 697
V +PD V+FVG AL N+AV Q +FN+A+
Sbjct: 312 VTKPDLVIFVGDALTGNDAVYQAEEFNRAV 341
>UniRef50_A2BN60 Cluster: Signal recognition particle GTPase; n=2;
Desulfurococcales|Rep: Signal recognition particle
GTPase - Hyperthermus butylicus (strain DSM 5456 / JCM
9403)
Length = 312
Score = 108 bits (260), Expect = 1e-22
Identities = 70/211 (33%), Positives = 110/211 (52%), Gaps = 1/211 (0%)
Frame = +1
Query: 4 PVLDKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSP 183
P+LD+L L +VA ++A ++ + + +L G+ + F V V +L +++V +LS
Sbjct: 33 PLLDELVIELAESDVALEVAEEIANRLREELIGRKIPRFSDVRSLVVESLEKAIVDVLSR 92
Query: 184 KRR-VDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFR 360
+ +D++ + ++ G P + F GVNGVGK+T +AK + +N ++ +IAA DT+R
Sbjct: 93 GYQPLDLIAEA-RSRSPGNPLRILFFGVNGVGKTTTIAKFAYMFKQNGITPVIAAADTYR 151
Query: 361 AGAVEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVL 540
AGA EQLR H V YG D A + +AI YA V+L
Sbjct: 152 AGAQEQLRRHAE-------------KLSVPFIGGRYGADPASVVYDAIEYARARGYRVIL 198
Query: 541 IDTAGRMQDNEPLMRALAKLIRGQRTRHGAL 633
DTAGRM + LM L K+ R + + AL
Sbjct: 199 ADTAGRMHTDRDLMEELRKITRVAKPDYRAL 229
>UniRef50_A3DNH8 Cluster: Signal recognition particle-docking
protein FtsY; n=1; Staphylothermus marinus F1|Rep:
Signal recognition particle-docking protein FtsY -
Staphylothermus marinus (strain ATCC 43588 / DSM 3639 /
F1)
Length = 295
Score = 107 bits (258), Expect = 2e-22
Identities = 70/200 (35%), Positives = 105/200 (52%)
Frame = +1
Query: 7 VLDKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSPK 186
++D+ + LI +VA D+A ++ + +E K++ +S+ + +K T I S
Sbjct: 29 LIDEFKFELISNDVAYDVAEEITTKLVEAVENKIVRDKESLIEFLKKT-------IRSYF 81
Query: 187 RRVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAG 366
V+++ D H + +PY++ F GVNGVGK+T +AK + L+ A DTFRAG
Sbjct: 82 DSVELI-DIFHEASKTKPYIIVFLGVNGVGKTTTIAKTAVLFRDKGFKPLMVAADTFRAG 140
Query: 367 AVEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLID 546
A EQLR H + ++ YG D A IA +AIR+A DVVLID
Sbjct: 141 AQEQLRIHGERTG-------------IPVFMGKYGADPASIAFDAIRHAETRGYDVVLID 187
Query: 547 TAGRMQDNEPLMRALAKLIR 606
TAGRM + L+ L K+IR
Sbjct: 188 TAGRMHTDSNLVDELRKIIR 207
>UniRef50_UPI00015BB111 Cluster: signal recognition particle-docking
protein FtsY; n=1; Ignicoccus hospitalis KIN4/I|Rep:
signal recognition particle-docking protein FtsY -
Ignicoccus hospitalis KIN4/I
Length = 340
Score = 105 bits (252), Expect = 1e-21
Identities = 67/201 (33%), Positives = 108/201 (53%)
Frame = +1
Query: 4 PVLDKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSP 183
P+L++ L +VA ++A +L ++ L G + + ++ L ++++ ++S
Sbjct: 65 PLLEEYVLTLSELDVAYEVAEELIENFKKNLAGLKIKRGVDEREVIEKALKDAILGLISV 124
Query: 184 KRRVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRA 363
D++ + A++EGR + F GVNGVGK+T +AK+ + + ++ ++AA DTFRA
Sbjct: 125 PA-FDLIEEAKRAQREGRILKIMFMGVNGVGKTTTIAKVAYAMKRAGVTPVLAAADTFRA 183
Query: 364 GAVEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLI 543
GAVEQL+ H V + K YG D A +A +AI YA +VVLI
Sbjct: 184 GAVEQLKVHAERMG-------------VPIITKPYGSDPASVAYDAIEYAKARGFNVVLI 230
Query: 544 DTAGRMQDNEPLMRALAKLIR 606
DTAGRM + LM L K+ R
Sbjct: 231 DTAGRMHVDVDLMNELRKVAR 251
>UniRef50_Q8ZTT8 Cluster: Signal recognition particle protein
(Docking protein), probable; n=5; Thermoproteaceae|Rep:
Signal recognition particle protein (Docking protein),
probable - Pyrobaculum aerophilum
Length = 305
Score = 99.5 bits (237), Expect = 8e-20
Identities = 65/192 (33%), Positives = 95/192 (49%)
Frame = +1
Query: 31 LIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSPKRRVDILRD 210
L+ +VA ++A+ + + + +L G + F +K + E+L+ ++ VD +D
Sbjct: 41 LVESDVAVEVADAVVEELRKRLVGIKVPRFGDKNAVIKKAVFEALMGVIDDVPDVDFYQD 100
Query: 211 CLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAVEQLRTH 390
E RP V+ F G NG GK+T LAK+ F L E V+ AA DTFRAGA EQL H
Sbjct: 101 SKRLLNETRPVVVMFLGPNGYGKTTTLAKLAFNLQEMGFRVVAAAADTFRAGAREQLEEH 160
Query: 391 TRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDN 570
+ + YG D A +A +A+++A VLIDTAGRM +
Sbjct: 161 GKRVG-------------FKVISGPYGADPASVAYDALQHAKARGYHFVLIDTAGRMHTD 207
Query: 571 EPLMRALAKLIR 606
LM L K+ R
Sbjct: 208 ANLMEELRKIQR 219
>UniRef50_Q2FS95 Cluster: Signal recognition particle-docking
protein FtsY; n=1; Methanospirillum hungatei JF-1|Rep:
Signal recognition particle-docking protein FtsY -
Methanospirillum hungatei (strain JF-1 / DSM 864)
Length = 353
Score = 98.3 bits (234), Expect = 2e-19
Identities = 66/200 (33%), Positives = 99/200 (49%)
Frame = +1
Query: 7 VLDKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSPK 186
+LD+L L+ +VA + + + L G SV V+ L+++L+ +L
Sbjct: 84 ILDELEMGLLESDVAFSVTEAILARIKADLSGSKRKIGTSVDSIVRNALSDALLGVLG-- 141
Query: 187 RRVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAG 366
VDI C ++ RP + F GVNG GK+T++AK+ +L +N SV++ A DTFRAG
Sbjct: 142 EGVDI---CAFIREHERPVKILFTGVNGTGKTTSIAKVTRFLQKNGFSVVLGAGDTFRAG 198
Query: 367 AVEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLID 546
A+EQ+ H V + + G D + + + YA K DVVL D
Sbjct: 199 AIEQIDVHGERLG-------------VKVIQHQEGSDPTAVLFDTVEYARAHKIDVVLGD 245
Query: 547 TAGRMQDNEPLMRALAKLIR 606
TAGR + LM LAK+ R
Sbjct: 246 TAGRFHNRANLMNQLAKIRR 265
>UniRef50_A5UL28 Cluster: Signal recognition particle GTPase SRP54;
n=1; Methanobrevibacter smithii ATCC 35061|Rep: Signal
recognition particle GTPase SRP54 - Methanobrevibacter
smithii (strain PS / ATCC 35061 / DSM 861)
Length = 470
Score = 96.3 bits (229), Expect = 7e-19
Identities = 62/201 (30%), Positives = 105/201 (52%), Gaps = 1/201 (0%)
Frame = +1
Query: 7 VLDKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSPK 186
+L +L L+ +VA ++A+ + DSV L G+ + + + + L ++ I+
Sbjct: 188 ILWELEMGLLEGDVAMEVASAVVDSVKDDLVGRKIKRSNDITEYTYNALRNAVAEIIDIP 247
Query: 187 RRVDILRDCLHAKQ-EGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRA 363
+ + + + AK+ +G P V+ F G+NG GK+T + K+ + ++ + +IAA DTFRA
Sbjct: 248 GKS--MTEMIEAKKAQGEPLVVMFVGINGTGKTTTIGKLANYYLKKGYTPVIAAADTFRA 305
Query: 364 GAVEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLI 543
GA+EQ+ H V L + G D A +A +A+ +A ++VLI
Sbjct: 306 GAIEQVNYHADKVG-------------VKLIKHQKGSDPAAVAFDAVEHAKAQGKELVLI 352
Query: 544 DTAGRMQDNEPLMRALAKLIR 606
DTAGRMQ N LM + K+ R
Sbjct: 353 DTAGRMQTNTNLMDEMKKIKR 373
Score = 36.7 bits (81), Expect = 0.61
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +2
Query: 608 VNEPDTVLFVGXALVXNEAVDQLVKFNQAL 697
V +PD V+FVG AL N+A Q KFN+A+
Sbjct: 374 VAKPDLVVFVGDALTGNDATQQASKFNEAI 403
>UniRef50_UPI00015BCE02 Cluster: UPI00015BCE02 related cluster; n=1;
unknown|Rep: UPI00015BCE02 UniRef100 entry - unknown
Length = 463
Score = 94.7 bits (225), Expect = 2e-18
Identities = 64/200 (32%), Positives = 101/200 (50%)
Frame = +1
Query: 1 RPVLDKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILS 180
R + ++L + L K + ADI KL ++ L+ + + A+ +K L E L+ I+
Sbjct: 185 RKIDEELFEELEEKLIRADINVKLVLNIVENLKKEAIKRNLQTAEQLKPLLKEELLSIIR 244
Query: 181 PKRRVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFR 360
D+ + L+ K+ +P+V+ F GVNG GK+T + K+ + VL+ A DTFR
Sbjct: 245 NCGNKDLFFELLNEKE--KPFVILFLGVNGSGKTTTIGKLASIYKAQNKKVLLGAADTFR 302
Query: 361 AGAVEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVL 540
A A+EQL + V + +K G D A +A EA + + DVV+
Sbjct: 303 AAAIEQLEVWAQ-------------RAQVDIVKKQEGADPASVAFEATKKGLEEDYDVVI 349
Query: 541 IDTAGRMQDNEPLMRALAKL 600
IDTAGR+ EPL+ L K+
Sbjct: 350 IDTAGRLHTKEPLINELRKI 369
>UniRef50_Q5UY25 Cluster: Signal recognition particle receptor; n=8;
Halobacteriaceae|Rep: Signal recognition particle
receptor - Haloarcula marismortui (Halobacterium
marismortui)
Length = 429
Score = 94.3 bits (224), Expect = 3e-18
Identities = 64/199 (32%), Positives = 97/199 (48%)
Frame = +1
Query: 10 LDKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSPKR 189
LD L L+ +V +AN++ D V L G+ S V+ L ESL +++ +
Sbjct: 161 LDDLELALLSSDVEMSVANEILDGVKENLTGQTRRRLSSTGNLVRDALRESLYDVINVGQ 220
Query: 190 RVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGA 369
D +Q +P + F GVNGVGK+T++AK+ + + LS ++A DT+RAGA
Sbjct: 221 -FDFDE---RVQQADKPVTIVFTGVNGVGKTTSIAKLAQYFEDRGLSTVLANGDTYRAGA 276
Query: 370 VEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDT 549
EQL H + +E+ G D + +A+ YA DVVL DT
Sbjct: 277 NEQLEKHAE-----------NLDKKIITHEQ--GSDPTAVVYDAVEYAKANDIDVVLGDT 323
Query: 550 AGRMQDNEPLMRALAKLIR 606
AGR+ ++ LM L K+ R
Sbjct: 324 AGRLHTSDDLMAQLEKIDR 342
>UniRef50_Q11CW5 Cluster: Signal recognition particle-docking
protein FtsY; n=11; Rhizobiales|Rep: Signal recognition
particle-docking protein FtsY - Mesorhizobium sp.
(strain BNC1)
Length = 500
Score = 91.5 bits (217), Expect = 2e-17
Identities = 63/199 (31%), Positives = 101/199 (50%)
Frame = +1
Query: 10 LDKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSPKR 189
L L D L+ ++ + A ++ D++++ GK D V+A + E + ++L P
Sbjct: 232 LQDLEDVLLRADLGLETAMRVTDALSVGRYGK-----DITGAEVQAVMAEEIEKVLKPVA 286
Query: 190 RVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGA 369
+ + D H +P+V+ GVNG GK+T + K+ L + L+V++AA DTFRA A
Sbjct: 287 -LPLELDLSH-----KPHVILVVGVNGTGKTTTIGKLAAKLAQGGLNVMLAAGDTFRAAA 340
Query: 370 VEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDT 549
+EQL+ + G DAAG+A EA A +DV++IDT
Sbjct: 341 IEQLKIWGERTGS-------------AVISSRLGADAAGLAYEAYEKAKAAGSDVLIIDT 387
Query: 550 AGRMQDNEPLMRALAKLIR 606
AGR+Q+ LM L K++R
Sbjct: 388 AGRLQNKAELMAELEKIVR 406
>UniRef50_Q2GDL8 Cluster: Signal recognition particle-docking
protein FtsY; n=1; Neorickettsia sennetsu str.
Miyayama|Rep: Signal recognition particle-docking
protein FtsY - Neorickettsia sennetsu (strain Miyayama)
Length = 309
Score = 90.6 bits (215), Expect = 4e-17
Identities = 60/187 (32%), Positives = 94/187 (50%)
Frame = +1
Query: 46 VAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSPKRRVDILRDCLHAK 225
++ADI + + + IK K+ + VK+ E + ++L P + I
Sbjct: 46 ISADIGPTVTERI-IKTVKKIKVKDGESLEQVKSITREEMKKVLDPTSKKLIF------P 98
Query: 226 QEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAVEQLRTHTRXXX 405
Q G P V+ FCGVNG GK+T + K+ + I+ + +V+IAACD FRA A+EQLR
Sbjct: 99 QTG-PQVIVFCGVNGNGKTTTIGKLAYKFIQENKTVMIAACDLFRAAAIEQLR------- 150
Query: 406 XXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMR 585
T + K+A+G A +A+ A + K DV+++DT+GR+ LM
Sbjct: 151 ------FWAERASATFFSSETSKNASGTAYKALEKALEDKVDVLIVDTSGRLHTQNDLME 204
Query: 586 ALAKLIR 606
L K+ R
Sbjct: 205 ELKKICR 211
>UniRef50_Q57AW4 Cluster: FtsY, signal recognition particle-docking
protein; n=23; Alphaproteobacteria|Rep: FtsY, signal
recognition particle-docking protein - Brucella abortus
Length = 463
Score = 88.6 bits (210), Expect = 1e-16
Identities = 64/199 (32%), Positives = 101/199 (50%)
Frame = +1
Query: 10 LDKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSPKR 189
L L D LI ++ + A ++ D++A GK D + V+A ++ + ++L+P
Sbjct: 195 LQDLEDVLIQADLGLETAMRVTDALASGRYGK-----DVSGEEVRAIMSAEIEKVLAPVA 249
Query: 190 RVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGA 369
+ + D H +P+V+ GVNG GK+T + K+ L L V++AA DTFRA A
Sbjct: 250 K-PLELDLSH-----KPHVILVVGVNGTGKTTTIGKLAAKLTAGGLKVMLAAGDTFRAAA 303
Query: 370 VEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDT 549
+EQL + G DAAG+A +A A + +DV++IDT
Sbjct: 304 IEQLHIWGERTGS-------------PVVSSKLGADAAGLAYDAWEKAKEAGSDVLIIDT 350
Query: 550 AGRMQDNEPLMRALAKLIR 606
AGR+Q+ LM LAK++R
Sbjct: 351 AGRLQNKAELMDELAKIVR 369
>UniRef50_Q9PC71 Cluster: Cell division protein; n=11;
Xanthomonadaceae|Rep: Cell division protein - Xylella
fastidiosa
Length = 397
Score = 88.2 bits (209), Expect = 2e-16
Identities = 60/200 (30%), Positives = 98/200 (49%)
Frame = +1
Query: 7 VLDKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSPK 186
+LD++ LI +V N L D + +++ + +T+ A L L+ IL P
Sbjct: 122 LLDEIETALITADVGVSTTNALVDGLRKRMKAREFADI----QTLLAALRNELIAILRPV 177
Query: 187 RRVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAG 366
+ I+ K++ P+V GVNGVGK+T + K+ W + S+++AA DTFRA
Sbjct: 178 SKPLIV------KRDALPFVFLVVGVNGVGKTTTIGKLAKWFKRDGYSLMLAAGDTFRAA 231
Query: 367 AVEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLID 546
AV QL+ + + +KG DAA + +A++ A T+V++ D
Sbjct: 232 AVAQLQA------------WGERNSITVIAQKGPNADAASVVYDALQAAKARSTEVLIAD 279
Query: 547 TAGRMQDNEPLMRALAKLIR 606
TAGR+ LM L+K+ R
Sbjct: 280 TAGRLHTQIGLMNELSKIRR 299
>UniRef50_A3CWZ1 Cluster: Signal recognition particle-docking
protein FtsY; n=3; Euryarchaeota|Rep: Signal recognition
particle-docking protein FtsY - Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1)
Length = 354
Score = 88.2 bits (209), Expect = 2e-16
Identities = 63/192 (32%), Positives = 98/192 (51%)
Frame = +1
Query: 31 LIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSPKRRVDILRD 210
L+ +VA + +++ + L G+ SV V +TL +L +L +D+ R
Sbjct: 92 LLENDVALPVTDEIIARMRRDLVGRHRKIGASVDDLVVSTLRSALCGVLG--EGLDLSR- 148
Query: 211 CLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAVEQLRTH 390
+ ++ RP + F GVNG GK+T +AK+ +L N +V+I A DTFRAGA+EQ+RTH
Sbjct: 149 --YIREHERPVKILFTGVNGTGKTTTVAKVGQYLQTNGFTVVIGAGDTFRAGAIEQIRTH 206
Query: 391 TRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDN 570
+ T+ + G D + + +A++YA DVVL DTAGR +
Sbjct: 207 A------------DRLGIKTIQHQA-GADPSAVLFDAVQYAKAHDIDVVLADTAGRFHNR 253
Query: 571 EPLMRALAKLIR 606
LM L K+ R
Sbjct: 254 ANLMNQLDKIRR 265
>UniRef50_Q6KYV1 Cluster: Signal recognition particle receptor FtsY;
n=4; Thermoplasmatales|Rep: Signal recognition particle
receptor FtsY - Picrophilus torridus
Length = 315
Score = 87.8 bits (208), Expect = 2e-16
Identities = 65/201 (32%), Positives = 107/201 (53%)
Frame = +1
Query: 13 DKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSPKRR 192
+++++ LI +V+ + A ++ + +K K L S +K+ L L +LS + +
Sbjct: 52 ERVQEILIESDVSFESAERIVEM--LKNREKKLSRKISY-DDIKSNLRSVLYDVLS-QAK 107
Query: 193 VDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAV 372
D+ D L+ + +PYV+ F G+NG GK+T + KI +L N+ V+IAA DTFRAGA+
Sbjct: 108 SDL--DLLNVDK--KPYVILFIGINGTGKTTTIGKIASYLKNNNKKVVIAAGDTFRAGAI 163
Query: 373 EQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTA 552
EQ+ + + +G D A +A +AI +A + D VLID+A
Sbjct: 164 EQI-------------SIIGEKTGTEVIKHDFGSDPASVAYDAIEHARARRIDYVLIDSA 210
Query: 553 GRMQDNEPLMRALAKLIRGQR 615
GRMQ N+ L+ + K+ R R
Sbjct: 211 GRMQTNKNLLSEMKKIKRVAR 231
>UniRef50_Q0BWE6 Cluster: Signal recognition particle-docking
protein FtsY; n=1; Hyphomonas neptunium ATCC 15444|Rep:
Signal recognition particle-docking protein FtsY -
Hyphomonas neptunium (strain ATCC 15444)
Length = 414
Score = 86.6 bits (205), Expect = 6e-16
Identities = 64/201 (31%), Positives = 96/201 (47%), Gaps = 2/201 (0%)
Frame = +1
Query: 10 LDKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSV--AKTVKATLTESLVRILSP 183
L++L+D LI ++ +A ++ +A G FD + ++ L E + IL P
Sbjct: 144 LEELQDLLITSDMGTRVAMRVTKGIA-------KGRFDKEISGEEIRLALAEEIEEILKP 196
Query: 184 KRRVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRA 363
+ +V D RP ++ F GVNG GK+T + KI L E L+ A DTFRA
Sbjct: 197 REQVVDFSD------GPRPRIVLFVGVNGSGKTTTIGKIASKLQEQGAKALLVAGDTFRA 250
Query: 364 GAVEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLI 543
AVEQL+ + + +G DAAG+ A+ A D+VL+
Sbjct: 251 AAVEQLKVWGERAG-------------IPVMAGAHGADAAGLVYGAVERAKAEDLDLVLV 297
Query: 544 DTAGRMQDNEPLMRALAKLIR 606
DTAGR+Q+ LM L K++R
Sbjct: 298 DTAGRLQNKAELMSELGKIVR 318
>UniRef50_Q2RV63 Cluster: Cell division transporter
substrate-binding protein FtsY; n=1; Rhodospirillum
rubrum ATCC 11170|Rep: Cell division transporter
substrate-binding protein FtsY - Rhodospirillum rubrum
(strain ATCC 11170 / NCIB 8255)
Length = 506
Score = 86.2 bits (204), Expect = 8e-16
Identities = 65/199 (32%), Positives = 97/199 (48%)
Frame = +1
Query: 10 LDKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSPKR 189
L+ L D LI ++ + A KL S+A + GK + + ++ + + IL P
Sbjct: 238 LEDLEDLLITADIGVETAGKLTRSLAKERFGK-----NVTGEEIRGHFADEIATILGPVA 292
Query: 190 RVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGA 369
R L +P+V+ GVNG GK+T + KI L+ + VL+AA DTFRA A
Sbjct: 293 RP------LEIDGSLKPHVVLVVGVNGSGKTTTIGKIANQLVHENKRVLLAAGDTFRAAA 346
Query: 370 VEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDT 549
VEQLR + + G D+AG+A +A++ A DV+LIDT
Sbjct: 347 VEQLR-------------IWGDRTGCEVIARDTGADSAGLAFDALQKARAEGYDVLLIDT 393
Query: 550 AGRMQDNEPLMRALAKLIR 606
AGR+ + LM L K++R
Sbjct: 394 AGRLHNKTELMEELKKVVR 412
>UniRef50_A5EYA3 Cluster: Signal recognition particle FtsY; n=2;
Dichelobacter nodosus|Rep: Signal recognition particle
FtsY - Dichelobacter nodosus (strain VCS1703A)
Length = 450
Score = 86.2 bits (204), Expect = 8e-16
Identities = 61/200 (30%), Positives = 99/200 (49%)
Frame = +1
Query: 7 VLDKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSPK 186
+LD L L+ + +I K+ + K+ K L D+V K V + ++ +L+P
Sbjct: 181 LLDDLEMRLLTADCGIEITEKIIAHIKDKMNRKELADSDAVQKAV----ADYMIELLTPY 236
Query: 187 RRVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAG 366
+ C+ Q P+V+ G+NG GK+T + K+ L + +++AA DTFRA
Sbjct: 237 EQPL----CVEKHQ---PFVILMAGINGAGKTTTIGKLSHRLQQEGKKIMLAAADTFRAA 289
Query: 367 AVEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLID 546
AVEQL+T + + + G DAA +A +A++ A K DV++ID
Sbjct: 290 AVEQLQT-------------WGERHHIPVIAQKTGADAASVAYDALQSAQARKMDVLIID 336
Query: 547 TAGRMQDNEPLMRALAKLIR 606
TAGR+ + LM L K+ R
Sbjct: 337 TAGRLHTQDHLMDELKKVKR 356
>UniRef50_A7ICC8 Cluster: Signal recognition particle-docking
protein FtsY; n=1; Xanthobacter autotrophicus Py2|Rep:
Signal recognition particle-docking protein FtsY -
Xanthobacter sp. (strain Py2)
Length = 529
Score = 84.6 bits (200), Expect = 2e-15
Identities = 64/201 (31%), Positives = 104/201 (51%), Gaps = 2/201 (0%)
Frame = +1
Query: 10 LDKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSPKR 189
L++L D LI ++ + + ++ ++V K++ + VK + E + RIL P
Sbjct: 261 LEELEDVLIRADLGVETSMRIVETVGKGRHDKMISP-----EEVKRLIAEEVERILIPVA 315
Query: 190 RVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICF-WLIENDLSVLIAACDTFRAG 366
+ ++ D H +P+V+ GVNG GK+T + K+ W E V++AA DTFRA
Sbjct: 316 Q-PLVVDTAH-----KPFVVLMVGVNGSGKTTTIGKLAAQWRTEGK-KVVLAAGDTFRAA 368
Query: 367 AVEQLRT-HTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLI 543
A+EQL+ TR T+ + G DAAG+A EA+ A D++++
Sbjct: 369 AIEQLKVWGTRTG--------------ATVIAREQGSDAAGVAHEAVVEARAAGADILMV 414
Query: 544 DTAGRMQDNEPLMRALAKLIR 606
DTAGR+Q+ LM L K++R
Sbjct: 415 DTAGRLQNRTELMAELEKVVR 435
>UniRef50_Q5LTS4 Cluster: Signal recognition particle-docking
protein FtsY; n=46; Alphaproteobacteria|Rep: Signal
recognition particle-docking protein FtsY - Silicibacter
pomeroyi
Length = 390
Score = 84.2 bits (199), Expect = 3e-15
Identities = 67/200 (33%), Positives = 102/200 (51%)
Frame = +1
Query: 7 VLDKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSPK 186
+L++L + LI ++ D A ++ ++A G+ L T + +KA L + + RI+ P
Sbjct: 120 MLEQLEELLIAADMGVDTALRVTANMAEGRIGRKLST-----QEIKALLAQEITRIMEPV 174
Query: 187 RRVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAG 366
R L + K RP V+ GVNG GK+T + K+ V+IAA DTFRA
Sbjct: 175 ARPMPL----YPK---RPQVVLVVGVNGSGKTTTIGKLASQFKAAGKKVVIAAGDTFRAA 227
Query: 367 AVEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLID 546
AVEQL+ ++T E G D A +A +A+ A + D++LID
Sbjct: 228 AVEQLQV----------WGDRAGVPVLTAPE---GSDPASLAFDAMTRAQEDGADLLLID 274
Query: 547 TAGRMQDNEPLMRALAKLIR 606
TAGR+Q+ LM LAK++R
Sbjct: 275 TAGRLQNRADLMEELAKIVR 294
>UniRef50_Q8PYQ0 Cluster: Signal recognition particle subunit
Ffh/SRP54; n=9; Euryarchaeota|Rep: Signal recognition
particle subunit Ffh/SRP54 - Methanosarcina mazei
(Methanosarcina frisia)
Length = 419
Score = 83.4 bits (197), Expect = 5e-15
Identities = 52/185 (28%), Positives = 91/185 (49%)
Frame = +1
Query: 52 ADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSPKRRVDILRDCLHAKQE 231
+D+A + +++ ++ ++ GT + + E+L + + + + K
Sbjct: 160 SDLAVSVSEAIVESVKNQLTGTTKRIGSNTGDIVEEALKKAILDVVSANTFDFDEYVKNR 219
Query: 232 GRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAVEQLRTHTRXXXXX 411
+P + F G+NG GK+T+++K+ L++ SV++AA DTFRAGA++QL H
Sbjct: 220 PKPVHIVFVGINGTGKTTSISKMTHRLLKLGYSVVLAAGDTFRAGAIDQLGIHADRLG-- 277
Query: 412 XXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRAL 591
V + + G D A + +A++YA D VL DTAGRM N LM +
Sbjct: 278 -----------VKMIKHQAGADPAAVIYDAVQYAKAHNIDFVLSDTAGRMHTNMNLMAQM 326
Query: 592 AKLIR 606
K+ R
Sbjct: 327 EKICR 331
>UniRef50_Q4FT71 Cluster: Cell division transporter
substrate-binding protein FtsY; n=2; Psychrobacter|Rep:
Cell division transporter substrate-binding protein FtsY
- Psychrobacter arcticum
Length = 478
Score = 82.6 bits (195), Expect = 9e-15
Identities = 64/203 (31%), Positives = 103/203 (50%)
Frame = +1
Query: 7 VLDKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSPK 186
+L+++ D L+ ++ + N++ S+ + + G KA TE LV IL+PK
Sbjct: 205 LLEEVEDQLLVADIGVNATNRIIKSLTEQTDR---GDLIYAHSLYKALQTE-LVDILTPK 260
Query: 187 RRVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAG 366
I+ +KQ P+V+ GVNGVGK+T + K+ L SV++AA DTFRA
Sbjct: 261 VAPLIIDT---SKQ---PFVILVVGVNGVGKTTTIGKLAKRLQGEGKSVMLAAGDTFRAA 314
Query: 367 AVEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLID 546
A EQL+ + + +G+G D+A + +A++ A DV++ D
Sbjct: 315 ATEQLQ-------------IWGERNNIPVVAQGHGSDSASVIFDAMQSAKAKNIDVLIAD 361
Query: 547 TAGRMQDNEPLMRALAKLIRGQR 615
TAGR+Q+ LM L K++R R
Sbjct: 362 TAGRLQNKTHLMAELEKVVRVMR 384
>UniRef50_A3VPZ8 Cluster: FtsY, signal recognition particle-docking
protein; n=6; Alphaproteobacteria|Rep: FtsY, signal
recognition particle-docking protein - Parvularcula
bermudensis HTCC2503
Length = 459
Score = 82.6 bits (195), Expect = 9e-15
Identities = 62/200 (31%), Positives = 95/200 (47%), Gaps = 1/200 (0%)
Frame = +1
Query: 10 LDKLRDHLIGKNVAADIANKLCDSVAI-KLEGKVLGTFDSVAKTVKATLTESLVRILSPK 186
L++L D LI ++ ++ +A K + +V G + ++A L+ + L+P
Sbjct: 190 LEELEDLLIMADIGVPTTTRIITQLAKDKFDQEVSG------EDIRAILSREIETTLAPL 243
Query: 187 RRVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAG 366
+ D H P+V+ GVNG GK+T + K+ SVL+AACDTFRA
Sbjct: 244 E-AQLAPDGTHG-----PHVILMTGVNGAGKTTTIGKLAQQFTAEGKSVLLAACDTFRAA 297
Query: 367 AVEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLID 546
A+EQL V + + G D A +A +A+ A D+VLID
Sbjct: 298 AIEQLTVWGERVG-------------VPVISREQGADPAALAYDAVAKAQAEGIDIVLID 344
Query: 547 TAGRMQDNEPLMRALAKLIR 606
TAGR+Q+ LM L K++R
Sbjct: 345 TAGRLQNRRELMDELGKIVR 364
>UniRef50_A3UI71 Cluster: Probable cell division protein; n=1;
Oceanicaulis alexandrii HTCC2633|Rep: Probable cell
division protein - Oceanicaulis alexandrii HTCC2633
Length = 437
Score = 82.6 bits (195), Expect = 9e-15
Identities = 51/123 (41%), Positives = 65/123 (52%)
Frame = +1
Query: 238 PYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAVEQLRTHTRXXXXXXX 417
P V+ F GVNG GK+T L KI + V+ AA DTFRA AVEQL+ +
Sbjct: 233 PSVVVFVGVNGSGKTTTLGKIAVKMTREGADVITAAGDTFRAAAVEQLQVWSERAG---- 288
Query: 418 XXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAK 597
+ G DAAG+A +AI+ K+D VLIDTAGR+Q+ LM L K
Sbjct: 289 ---------AKFLSRELGADAAGLAYDAIQQGRTEKSDAVLIDTAGRLQNKAELMDELRK 339
Query: 598 LIR 606
+IR
Sbjct: 340 IIR 342
>UniRef50_A3IG83 Cluster: Recognition particle-docking protein;
n=18; Bacteria|Rep: Recognition particle-docking protein
- Bacillus sp. B14905
Length = 424
Score = 81.4 bits (192), Expect = 2e-14
Identities = 59/198 (29%), Positives = 102/198 (51%)
Frame = +1
Query: 13 DKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSPKRR 192
++L D L+ +V + +L D + +++ K + + + + ++E LV I +
Sbjct: 143 EELEDLLLQADVGFETVMELMDKLRFEVQRKNIKDTNGI----QTLISEKLVEIYE-QGE 197
Query: 193 VDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAV 372
D++ L+ + +G V+ F GVNGVGK+T + K+ L +V++AA DTFRAGA+
Sbjct: 198 DDLIE--LNMQPDGELTVILFVGVNGVGKTTTIGKLARRLKSQGKTVVLAAGDTFRAGAI 255
Query: 373 EQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTA 552
+QL+ + ++ G D A + +AIR A + K DV++ DTA
Sbjct: 256 DQLQV-------------WGDRVGCEVIKQSEGSDPAAVMYDAIRAAKNRKADVLICDTA 302
Query: 553 GRMQDNEPLMRALAKLIR 606
GR+Q+ LM L K+ R
Sbjct: 303 GRLQNKVNLMNELEKVHR 320
>UniRef50_Q5P9Q2 Cluster: Cell division protein; n=2; Anaplasma|Rep:
Cell division protein - Anaplasma marginale (strain St.
Maries)
Length = 305
Score = 81.0 bits (191), Expect = 3e-14
Identities = 53/126 (42%), Positives = 66/126 (52%)
Frame = +1
Query: 229 EGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAVEQLRTHTRXXXX 408
E P V+ CGVNG GK+T AK+ SVL+ ACDTFRA AV QL+
Sbjct: 100 EHSPQVVMLCGVNGSGKTTTAAKLARKFQREGKSVLMGACDTFRAAAVSQLK-------- 151
Query: 409 XXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRA 588
+ G DAA IA +A+ A K DVVLIDTAGR+Q+++ LM
Sbjct: 152 -----IWADRISCPIIAGEAGADAASIAYKAVDQAIREKIDVVLIDTAGRLQNHKNLMEE 206
Query: 589 LAKLIR 606
LAK+ R
Sbjct: 207 LAKVRR 212
>UniRef50_Q8G736 Cluster: FtsY signal recognition particle; n=4;
Bifidobacterium|Rep: FtsY signal recognition particle -
Bifidobacterium longum
Length = 420
Score = 80.6 bits (190), Expect = 4e-14
Identities = 64/200 (32%), Positives = 99/200 (49%), Gaps = 2/200 (1%)
Frame = +1
Query: 13 DKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSPKRR 192
+ + D L+ +V AD + +L D ++ + ++ G D V+ATL E L+ ++ R
Sbjct: 152 EDVEDTLLLADVGADASAQLVDD--LRTDARITGKADPAE--VRATLKEKLLDLVG--RD 205
Query: 193 VDILRDCLHAKQEG--RPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAG 366
D L+A++ G +P V+ GVNG GK+T K+ + + V++ A DTFRA
Sbjct: 206 TDRR---LNAEKPGAAKPSVIIMVGVNGTGKTTTAGKLARLFVAENKQVMMGAADTFRAA 262
Query: 367 AVEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLID 546
A +QL T V +K G D A +A EA A + DV++ID
Sbjct: 263 AADQLET-----------WGARVNVPVVRSDKD-GADPASVAFEASAKAKEANADVLIID 310
Query: 547 TAGRMQDNEPLMRALAKLIR 606
TAGR+Q+ LM L K+ R
Sbjct: 311 TAGRLQNKSNLMDELGKIRR 330
>UniRef50_A6DTV8 Cluster: Fused Signal Recognition Particle (SRP)
receptor: membrane binding protein/conserved protein;
n=2; Lentisphaerae|Rep: Fused Signal Recognition
Particle (SRP) receptor: membrane binding
protein/conserved protein - Lentisphaera araneosa
HTCC2155
Length = 311
Score = 79.0 bits (186), Expect = 1e-13
Identities = 47/123 (38%), Positives = 65/123 (52%)
Frame = +1
Query: 238 PYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAVEQLRTHTRXXXXXXX 417
P V+ GVNG GK+T K+ + L ++ SVL+AACDTFRA A+EQL+ +
Sbjct: 103 PTVLLMVGVNGAGKTTTTGKLAYKLKQDGKSVLLAACDTFRAAAIEQLKHWGKRID---- 158
Query: 418 XXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAK 597
V + +G DAA IA +A A D ++IDTAGR + LM L K
Sbjct: 159 ---------VPVIAGQHGSDAAAIAYDACASAKAKNVDYLIIDTAGRQHTRQDLMEELPK 209
Query: 598 LIR 606
++R
Sbjct: 210 ILR 212
>UniRef50_Q7MXM2 Cluster: Signal recognition particle-docking
protein FtsY; n=4; Bacteroidetes/Chlorobi group|Rep:
Signal recognition particle-docking protein FtsY -
Porphyromonas gingivalis (Bacteroides gingivalis)
Length = 317
Score = 78.6 bits (185), Expect = 2e-13
Identities = 59/200 (29%), Positives = 91/200 (45%)
Frame = +1
Query: 7 VLDKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSPK 186
VLD+L + L+ +V D K+ ++E +V + L + + +L+
Sbjct: 44 VLDELENVLVTSDVGVDTTLKIIK----RIEERVARDKYVSTSELTTILRQEIASLLTEN 99
Query: 187 RRVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAG 366
D D +PYV+ GVNGVGK+T + K+ + SV++ A DTFRA
Sbjct: 100 GSAD--GDSFDLPSGTKPYVIMVVGVNGVGKTTTIGKLAHRFRQAGKSVVLGAADTFRAA 157
Query: 367 AVEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLID 546
AVEQL + V + ++ G D A +A + + A DVV+ID
Sbjct: 158 AVEQLEIWSERVG-------------VPIIKQQMGSDPASVAYDTVSSAVANGVDVVIID 204
Query: 547 TAGRMQDNEPLMRALAKLIR 606
TAGR+ + LM L K+ R
Sbjct: 205 TAGRLHNKVNLMNELTKIKR 224
>UniRef50_P51835 Cluster: Cell division protein ftsY homolog; n=43;
Firmicutes|Rep: Cell division protein ftsY homolog -
Bacillus subtilis
Length = 329
Score = 77.8 bits (183), Expect = 3e-13
Identities = 64/199 (32%), Positives = 98/199 (49%), Gaps = 1/199 (0%)
Frame = +1
Query: 13 DKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRIL-SPKR 189
++L + LI +V +L D +K E K D K V++ ++E LV I S
Sbjct: 53 EELEEVLISADVGFTTVMELIDE--LKKEVKRRNIQDP--KEVQSVISEKLVEIYNSGDE 108
Query: 190 RVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGA 369
++ L Q+GR V+ GVNGVGK+T + K+ + + SV++AA DTFRAGA
Sbjct: 109 QISELNI-----QDGRLNVILLVGVNGVGKTTTIGKLAHKMKQEGKSVVLAAGDTFRAGA 163
Query: 370 VEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDT 549
+EQL V + ++ G D A + +A+ A DV++ DT
Sbjct: 164 IEQLEVWGERTG-------------VPVIKQTAGSDPAAVIYDAVHAAKARNADVLICDT 210
Query: 550 AGRMQDNEPLMRALAKLIR 606
AGR+Q+ LM+ L K+ R
Sbjct: 211 AGRLQNKVNLMKELEKVKR 229
>UniRef50_Q60CH3 Cluster: Cytochrome oxidase assembly family
protein/cell division protein FtsY; n=6; Bacteria|Rep:
Cytochrome oxidase assembly family protein/cell division
protein FtsY - Methylococcus capsulatus
Length = 671
Score = 77.4 bits (182), Expect = 4e-13
Identities = 51/143 (35%), Positives = 74/143 (51%), Gaps = 3/143 (2%)
Frame = +1
Query: 187 RRVDILRDC---LHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTF 357
R +DI+R C L E RP+V+ GVNGVGK+T + K+ L SV++AA DTF
Sbjct: 439 RLLDIVRPCSVPLVIPPEVRPFVILVVGVNGVGKTTTIGKLAKRLQNEGHSVMLAAGDTF 498
Query: 358 RAGAVEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVV 537
RA AVEQL+T + + + G D+A + +A+ A D++
Sbjct: 499 RAAAVEQLQT-------------WGERNKIAVIAQHSGADSASVIYDAVEAARARGVDIL 545
Query: 538 LIDTAGRMQDNEPLMRALAKLIR 606
+ DTAGR+ LM L+K+ R
Sbjct: 546 IADTAGRLHTKSNLMEELSKIKR 568
>UniRef50_Q64TK4 Cluster: Recognition particle-docking protein FtsY;
n=9; Bacteria|Rep: Recognition particle-docking protein
FtsY - Bacteroides fragilis
Length = 319
Score = 77.0 bits (181), Expect = 5e-13
Identities = 59/199 (29%), Positives = 91/199 (45%), Gaps = 1/199 (0%)
Frame = +1
Query: 7 VLDKLRDHLIGKNVAADIANKLCDSVAIKL-EGKVLGTFDSVAKTVKATLTESLVRILSP 183
VLD L + LI +V + + + + E K + T + + + L E + +L+
Sbjct: 44 VLDNLEEVLITSDVGVETTLNIIKRIEKRAAEDKYVNT-----QELNSILREEIAALLTE 98
Query: 184 KRRVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRA 363
D+ E +PYV+ GVNGVGK+T + K+ + + SV + A DTFRA
Sbjct: 99 NNSDDVAD--FDVPVEKKPYVIMVVGVNGVGKTTTIGKLAYQFKKAGKSVYLGAADTFRA 156
Query: 364 GAVEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLI 543
AVEQL V + ++ G D A +A + + A DVV+I
Sbjct: 157 AAVEQL-------------VIWGERVDVPVIKQKMGADPASVAFDTLSSAVANNADVVII 203
Query: 544 DTAGRMQDNEPLMRALAKL 600
DTAGR+ + LM L K+
Sbjct: 204 DTAGRLHNKVGLMNELTKI 222
>UniRef50_A5CCH6 Cluster: Cell division ABC transporter, periplasmic
substrate-binding protein; n=1; Orientia tsutsugamushi
Boryong|Rep: Cell division ABC transporter, periplasmic
substrate-binding protein - Orientia tsutsugamushi
(strain Boryong) (Rickettsia tsutsugamushi)
Length = 312
Score = 77.0 bits (181), Expect = 5e-13
Identities = 49/154 (31%), Positives = 77/154 (50%)
Frame = +1
Query: 139 VKATLTESLVRILSPKRRVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIE 318
+K+ L +S+++ P + LH K + VM CG+NG GK+T + K+ +
Sbjct: 75 IKSELAKSIIKFAFPNGNPE-----LHIKPDVLN-VMIICGINGNGKTTTIGKLSHYYNL 128
Query: 319 NDLSVLIAACDTFRAGAVEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAME 498
+ IAACDTFRA A EQL L++ G D A +A +
Sbjct: 129 QGQKIAIAACDTFRAAATEQLEVWANRSGSY-------------LFKGNPGADPASVAYQ 175
Query: 499 AIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKL 600
A+ +A D K +++ IDTAGR+ +++ LM L K+
Sbjct: 176 AVSWAIDNKINILFIDTAGRLHNHKNLMDQLKKI 209
>UniRef50_A3YMT1 Cluster: Signal recognition particle-docking
protein FtsY; n=9; Campylobacter jejuni|Rep: Signal
recognition particle-docking protein FtsY -
Campylobacter jejuni subsp. jejuni CF93-6
Length = 288
Score = 77.0 bits (181), Expect = 5e-13
Identities = 43/124 (34%), Positives = 66/124 (53%)
Frame = +1
Query: 235 RPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAVEQLRTHTRXXXXXX 414
+P+V GVNG GK+T++AK+ + + V++ ACDTFRAGA+EQL+ +
Sbjct: 82 KPFVELILGVNGAGKTTSIAKLAYLYKNQNQKVILGACDTFRAGAIEQLKLWAQKVD--- 138
Query: 415 XXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALA 594
V + G D + +A + I A D V+IDTAGR+Q+ + L L
Sbjct: 139 ----------VDIVLTAQGHDPSAVAFDTISKAKAKDFDRVIIDTAGRLQNQKNLAHELE 188
Query: 595 KLIR 606
K++R
Sbjct: 189 KIVR 192
>UniRef50_A1RXA8 Cluster: Signal recognition particle-docking
protein FtsY; n=1; Thermofilum pendens Hrk 5|Rep: Signal
recognition particle-docking protein FtsY - Thermofilum
pendens (strain Hrk 5)
Length = 302
Score = 77.0 bits (181), Expect = 5e-13
Identities = 60/193 (31%), Positives = 90/193 (46%), Gaps = 1/193 (0%)
Frame = +1
Query: 31 LIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSPKRRVDILRD 210
L+ VA ++A L ++ ++ GK LG F K + L + + VD L
Sbjct: 38 LVEAGVALEVAEALVADLSGRISGKKLGRFADKRKALLDELRALIRDVFLSAGSVD-LDG 96
Query: 211 CLHAKQEGRPYV-MAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAVEQLRT 387
+ G+ + + F G NG GK+T +AK+ + + V IAA DTFRAG++EQ+
Sbjct: 97 LVKRGVAGKGFFSILFLGPNGHGKTTTVAKLAYRFRKQGYRVAIAAADTFRAGSIEQV-- 154
Query: 388 HTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQD 567
+V+L GY D A +A EA++ VVLIDTAGRM
Sbjct: 155 --------SQWASRAGAEVVSL---GYNADPAAVAYEAVKKGEKGDFQVVLIDTAGRMHT 203
Query: 568 NEPLMRALAKLIR 606
+ LM + K+ R
Sbjct: 204 KKNLMDEMKKIAR 216
>UniRef50_Q895M6 Cluster: Signal recognition particle receptor ftsY;
n=15; Clostridiales|Rep: Signal recognition particle
receptor ftsY - Clostridium tetani
Length = 303
Score = 76.6 bits (180), Expect = 6e-13
Identities = 46/126 (36%), Positives = 69/126 (54%)
Frame = +1
Query: 229 EGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAVEQLRTHTRXXXX 408
E P ++ GVNGVGK+T++ K+ L N VL+AA DTFRA A+EQL ++
Sbjct: 100 EKTPEIILVIGVNGVGKTTSIGKMSHKLKNNGFKVLMAAGDTFRAAAIEQLEVWSQRAG- 158
Query: 409 XXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRA 588
V + + G D A + ++I+ A KTDV++ DTAGR+ + + LM
Sbjct: 159 ------------VDIIRQQEGSDPAAVVFDSIQAAKARKTDVLICDTAGRLHNKKNLMDE 206
Query: 589 LAKLIR 606
L+K+ R
Sbjct: 207 LSKINR 212
>UniRef50_Q0HPY1 Cluster: Signal recognition particle-docking
protein FtsY; n=21; Bacteria|Rep: Signal recognition
particle-docking protein FtsY - Shewanella sp. (strain
MR-7)
Length = 584
Score = 76.6 bits (180), Expect = 6e-13
Identities = 55/200 (27%), Positives = 97/200 (48%)
Frame = +1
Query: 7 VLDKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSPK 186
+ ++L + L+ +V + ++L S+ K L +++ ++ + ++L + P
Sbjct: 310 LFEELEEQLLIADVGVETTSRLIQSLTEHASRKQLKDAEALYDLLRDEMQKTLDPVAIP- 368
Query: 187 RRVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAG 366
L + PYV+ GVNGVGK+T + K+ SV++AA DTFRA
Sbjct: 369 ---------LVPENANGPYVILMVGVNGVGKTTTIGKLAKQYQRQGKSVMLAAGDTFRAA 419
Query: 367 AVEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLID 546
AVEQL+ + + + + G D+A + +A++ A K DV++ D
Sbjct: 420 AVEQLQVWGQRNN-------------IPVVAQHTGADSASVLFDALQAAKARKIDVLIAD 466
Query: 547 TAGRMQDNEPLMRALAKLIR 606
TAGR+Q+ LM L K++R
Sbjct: 467 TAGRLQNKSHLMEELKKVVR 486
>UniRef50_O32861 Cluster: Cell division protein ftsY homolog; n=13;
Mycoplasma|Rep: Cell division protein ftsY homolog -
Mycoplasma hominis
Length = 351
Score = 76.6 bits (180), Expect = 6e-13
Identities = 62/187 (33%), Positives = 92/187 (49%)
Frame = +1
Query: 46 VAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSPKRRVDILRDCLHAK 225
+ +DI+ KL + + + +V + K + + + L I + VD L+ K
Sbjct: 85 IMSDISIKLVQIIINECKKEVRNENITDPKLINEIIADKLFTIYTSNSVVDTT---LNIK 141
Query: 226 QEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAVEQLRTHTRXXX 405
+ R V+ GVNG GK+T+++KI LI+ VLIAA DTFRA AVEQL +
Sbjct: 142 -DNRLNVILVVGVNGSGKTTSISKIAKKLIDEGKKVLIAAGDTFRAAAVEQLEIWAK--- 197
Query: 406 XXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMR 585
+VT E D A + AI A K D++++DTAGR+Q+ LM
Sbjct: 198 -------RVGADIVTPNENEV--DPAAVVYRAIDIAKSKKYDILIVDTAGRLQNKVNLMN 248
Query: 586 ALAKLIR 606
LAK+ R
Sbjct: 249 ELAKINR 255
>UniRef50_Q6MBM6 Cluster: Probable signal recognition particle; n=1;
Candidatus Protochlamydia amoebophila UWE25|Rep:
Probable signal recognition particle - Protochlamydia
amoebophila (strain UWE25)
Length = 309
Score = 76.2 bits (179), Expect = 8e-13
Identities = 47/124 (37%), Positives = 66/124 (53%), Gaps = 1/124 (0%)
Frame = +1
Query: 238 PYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAVEQLRTHTRXXXXXXX 417
P ++ GVNG GK+T++AK+ + + VL+AA DTFRA A+EQL
Sbjct: 108 PQIILIVGVNGNGKTTSVAKLAYQFKQKGKKVLVAAADTFRAAAIEQLELWAHKLHIEIV 167
Query: 418 XXXXXXXXMVTLYEKGYGK-DAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALA 594
KG+ K D A +A +AI+ A K D+V+IDTAGR+ PLM+ L
Sbjct: 168 --------------KGHPKSDPAAVAFDAIQAAKARKCDLVIIDTAGRLHTKTPLMQELE 213
Query: 595 KLIR 606
K+ R
Sbjct: 214 KIKR 217
>UniRef50_A5US56 Cluster: Signal recognition particle-docking
protein FtsY; n=5; Chloroflexi (class)|Rep: Signal
recognition particle-docking protein FtsY - Roseiflexus
sp. RS-1
Length = 326
Score = 76.2 bits (179), Expect = 8e-13
Identities = 61/201 (30%), Positives = 92/201 (45%), Gaps = 2/201 (0%)
Frame = +1
Query: 4 PVLDKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSP 183
P+ D L D L + AD+ + + + + + A+ + L +VR+L
Sbjct: 52 PITDDLWDDLEALLIQADVGVETTMYLVNRTKDRCNRYGVKRAREARDMLKAEMVRVLQE 111
Query: 184 KRRVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLS--VLIAACDTF 357
+ R + + RPY++ GVNG GK+T +AK+ + L +N VL+AA DTF
Sbjct: 112 QER--------QPQIDARPYIILVVGVNGAGKTTLIAKLAYRL-KNQFGRRVLLAAGDTF 162
Query: 358 RAGAVEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVV 537
RA A EQL T V + +G G D + +AI S+ DV+
Sbjct: 163 RAAATEQLETWAERVG-------------VPVISRGQGADPGAVVYDAIEAVSNGDVDVL 209
Query: 538 LIDTAGRMQDNEPLMRALAKL 600
+IDTAGR+ LM L KL
Sbjct: 210 IIDTAGRLHAKTNLMLELQKL 230
>UniRef50_A4WFP3 Cluster: Signal recognition particle-docking
protein FtsY; n=9; Bacteria|Rep: Signal recognition
particle-docking protein FtsY - Enterobacter sp. 638
Length = 511
Score = 76.2 bits (179), Expect = 8e-13
Identities = 53/180 (29%), Positives = 88/180 (48%), Gaps = 1/180 (0%)
Frame = +1
Query: 70 LCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSPKRRVDILRDCLHAKQEGR-PYV 246
L V ++ K++ + A + E+L +L + + + EG+ P+V
Sbjct: 250 LIADVGVETTRKIIASLTEGASRKQLRDAEALYGLLKDEMGEILAKVDEPLNIEGKTPFV 309
Query: 247 MAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAVEQLRTHTRXXXXXXXXXX 426
+ GVNGVGK+T + K+ + SV++AA DTFRA AVEQL+ +
Sbjct: 310 ILMVGVNGVGKTTTIGKMARQFEQQGKSVMLAAGDTFRAAAVEQLQVWGQRNN------- 362
Query: 427 XXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIR 606
+ + + G D+A + +AI+ A DV++ DTAGR+Q+ LM L K++R
Sbjct: 363 ------IPVIAQHTGADSASVIFDAIQAAKARNVDVLIADTAGRLQNKSHLMEELKKIVR 416
>UniRef50_Q74IQ0 Cluster: Signal recognition particle receptor FtsY;
n=5; Lactobacillales|Rep: Signal recognition particle
receptor FtsY - Lactobacillus johnsonii
Length = 443
Score = 75.8 bits (178), Expect = 1e-12
Identities = 64/198 (32%), Positives = 94/198 (47%)
Frame = +1
Query: 13 DKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSPKRR 192
D L D LI +V + A +L DS ++ E K+ A +K + E LV I
Sbjct: 170 DDLEDLLIESDVGFETAEELTDS--LRDEAKLQNAKSHDA--LKQVIVEKLVDIYDKGGE 225
Query: 193 VDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAV 372
+ + L +P V F GVNG GK+T + K+ + ++ SV++ A DTFRAGAV
Sbjct: 226 GEDSK--LADDPSAKPNVYLFVGVNGAGKTTTIGKLAKRIKDSGKSVMMVAADTFRAGAV 283
Query: 373 EQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTA 552
EQL R ++T EK D A + ++ A + D +L+DTA
Sbjct: 284 EQLVEWGR----------RDGVEVITGPEKA---DPASVVYNGVKKAKERGIDFLLVDTA 330
Query: 553 GRMQDNEPLMRALAKLIR 606
GR+Q+ LM L K+ R
Sbjct: 331 GRLQNKVNLMSELDKIKR 348
>UniRef50_Q0IE72 Cluster: Signal recognition particle-docking
protein FtsY; n=21; Cyanobacteria|Rep: Signal
recognition particle-docking protein FtsY -
Synechococcus sp. (strain CC9311)
Length = 551
Score = 74.9 bits (176), Expect = 2e-12
Identities = 59/200 (29%), Positives = 93/200 (46%)
Frame = +1
Query: 7 VLDKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSPK 186
VLD L L+ + +++ D++ ++ +V+ + + + +K L + L +
Sbjct: 277 VLDDLESLLLRADAGVQATDQVLDALRQRMNEQVVDPSEGI-RFLKEQLRDLLDEPIKSS 335
Query: 187 RRVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAG 366
V++L A Q R V GVNGVGK+T L K+ + + S LIAA DTFRA
Sbjct: 336 A-VEVL-----APQRDRLNVWLLVGVNGVGKTTTLGKLANLAVRSGYSALIAAADTFRAA 389
Query: 367 AVEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLID 546
AV+Q++ + + D A + +AI A TD+VL+D
Sbjct: 390 AVQQVQV------------WGDRSDVPVVANPSANADPAAVVFDAIGAARSKGTDLVLVD 437
Query: 547 TAGRMQDNEPLMRALAKLIR 606
TAGR+Q LM L K+ R
Sbjct: 438 TAGRLQTKHNLMEELEKIRR 457
>UniRef50_Q8GDY7 Cluster: Signal recognition particle receptor FtsY;
n=1; Heliobacillus mobilis|Rep: Signal recognition
particle receptor FtsY - Heliobacillus mobilis
Length = 364
Score = 74.1 bits (174), Expect = 3e-12
Identities = 57/198 (28%), Positives = 92/198 (46%)
Frame = +1
Query: 13 DKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSPKRR 192
D L D L ++AD+ + + +L KV S ++ L E + IL
Sbjct: 35 DDLYDELEEALISADVGAETSIELVERLRRKVKEQKISDPSLLQGLLQEEIAAILGG--- 91
Query: 193 VDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAV 372
+ + +P V+ GVNGVGK+T +AK+ + VL+AA DTFRA A+
Sbjct: 92 -----EAIPVNLGNQPTVILIVGVNGVGKTTTIAKLAHRWKQEGRKVLLAAGDTFRAAAI 146
Query: 373 EQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTA 552
+QL + V + G D + +A +A++ A ++DV++IDTA
Sbjct: 147 DQLEIWGQRVG-------------VEVIRHQEGADPSAVAFDAVQAAKSRESDVLIIDTA 193
Query: 553 GRMQDNEPLMRALAKLIR 606
GR+ + LM L+K+ R
Sbjct: 194 GRLHNKSHLMNELSKINR 211
>UniRef50_Q97IA0 Cluster: Signal recognition particle GTPase, FtsY;
n=4; Bacteria|Rep: Signal recognition particle GTPase,
FtsY - Clostridium acetobutylicum
Length = 303
Score = 73.7 bits (173), Expect = 4e-12
Identities = 62/198 (31%), Positives = 91/198 (45%)
Frame = +1
Query: 13 DKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSPKRR 192
D L D L + +DI + + KL+ K+ V L E + IL K+
Sbjct: 36 DDLYDELEEILITSDIGVETSLYIIDKLKEKIKENKVKDPSLVNDCLKEVIKDILGDKK- 94
Query: 193 VDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAV 372
L KQ P + GVNGVGK+T++ KI L +L V++AA DTFRA A+
Sbjct: 95 -----GSLMPKQI--PETILVVGVNGVGKTTSIGKISSRLKSQNLKVIMAAADTFRAAAI 147
Query: 373 EQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTA 552
+QL ++ V + + G D A + +AI A K DV++ DTA
Sbjct: 148 DQLEVWSKRAN-------------VDIIKHQEGSDPAAVVFDAIEAAKARKADVLICDTA 194
Query: 553 GRMQDNEPLMRALAKLIR 606
GR+ + + LM L K+ R
Sbjct: 195 GRLHNKKNLMNELEKINR 212
>UniRef50_A6T2T2 Cluster: Signal recognition particle receptor;
n=59; Betaproteobacteria|Rep: Signal recognition
particle receptor - Janthinobacterium sp. (strain
Marseille) (Minibacterium massiliensis)
Length = 419
Score = 73.7 bits (173), Expect = 4e-12
Identities = 62/198 (31%), Positives = 97/198 (48%)
Frame = +1
Query: 13 DKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSPKRR 192
++L L+ + D L D++ K++ + L + A VK L L+ +L+P ++
Sbjct: 155 EELESALLMSDAGVDATQFLLDALKRKVKNEKL----TEAAQVKTALRSLLLEMLTPLQK 210
Query: 193 VDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAV 372
+L + +P VM GVNG GK+T + K+ L ++ SVL+AA DTFRA A
Sbjct: 211 PLVLG-------QHQPLVMMITGVNGAGKTTTIGKLAKHLQAHNQSVLLAAGDTFRAAAR 263
Query: 373 EQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTA 552
EQL + VT+ + G D A +A +A+ A T+VV++DTA
Sbjct: 264 EQLTVWGQRNN-------------VTVIAQESG-DPAAVAFDAVHSAQARGTNVVMVDTA 309
Query: 553 GRMQDNEPLMRALAKLIR 606
GR+ LM L K+ R
Sbjct: 310 GRLPTQLHLMEELKKVKR 327
>UniRef50_Q1NXJ3 Cluster: Cell division transporter
substrate-binding protein FtsY; n=4; Bacteria|Rep: Cell
division transporter substrate-binding protein FtsY -
delta proteobacterium MLMS-1
Length = 373
Score = 73.3 bits (172), Expect = 6e-12
Identities = 58/201 (28%), Positives = 93/201 (46%), Gaps = 1/201 (0%)
Frame = +1
Query: 7 VLDKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSPK 186
+ ++L + LI ++ A A +L D +++ L ++ + ++ L E LV+ P
Sbjct: 100 LFEELEELLITSDLGAATAMELLDRARARIKRDDLSEPAALREILQQLLLEYLVKAERPA 159
Query: 187 RRVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIEN-DLSVLIAACDTFRA 363
V E P+V+ GVNGVGK+T + K+ W +N VL+ A DTFRA
Sbjct: 160 ELV---------MPESGPFVIMVLGVNGVGKTTTIGKLA-WKFKNAGQRVLLVAADTFRA 209
Query: 364 GAVEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLI 543
A+EQL+ V + + G D + + +A YA DV+++
Sbjct: 210 AAIEQLQAWAERVG-------------VEVVAQQQGADPSSVIYDAFDYARPRDFDVIIV 256
Query: 544 DTAGRMQDNEPLMRALAKLIR 606
DTAGR+ LM L K+ R
Sbjct: 257 DTAGRLHTKVNLMEELRKVKR 277
>UniRef50_Q6YPP6 Cluster: Signal recognition particle-docking
protein FtsY; n=2; Candidatus Phytoplasma asteris|Rep:
Signal recognition particle-docking protein FtsY - Onion
yellows phytoplasma
Length = 347
Score = 72.9 bits (171), Expect = 8e-12
Identities = 46/127 (36%), Positives = 64/127 (50%)
Frame = +1
Query: 226 QEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAVEQLRTHTRXXX 405
Q P + F GVNGVGK+T + K+ L + VL+ A DTFRAGAVEQL+ +
Sbjct: 133 QNNLPQMYLFTGVNGVGKTTTIGKMAEALKQEGKKVLLIAADTFRAGAVEQLQIWAKRVG 192
Query: 406 XXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMR 585
V ++ K A + E I A D++L DTAGR+Q+ LM+
Sbjct: 193 -------------VEVFCKPLPAHPASVIFEGIELAKSQNYDIILCDTAGRLQNKTNLMQ 239
Query: 586 ALAKLIR 606
L+K+ R
Sbjct: 240 ELSKINR 246
>UniRef50_Q058E9 Cluster: Signal recognition particle receptor; n=1;
Buchnera aphidicola str. Cc (Cinara cedri)|Rep: Signal
recognition particle receptor - Buchnera aphidicola
subsp. Cinara cedri
Length = 346
Score = 72.5 bits (170), Expect = 1e-11
Identities = 40/121 (33%), Positives = 66/121 (54%)
Frame = +1
Query: 244 VMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAVEQLRTHTRXXXXXXXXX 423
++ G+NGVGK+T + K+ + SV+++ACDTFR+ A++QL
Sbjct: 145 IILVVGINGVGKTTAVVKLANYYKNLGKSVILSACDTFRSAAIDQL-------------I 191
Query: 424 XXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLI 603
+ ++ K G D + +A ++I YA K D+V+IDTAGRM + L++ L K+
Sbjct: 192 DLGNLYNIEIFYKSIGSDPSSVAFDSIIYAKKKKIDIVIIDTAGRMHNKMHLIQELKKMN 251
Query: 604 R 606
R
Sbjct: 252 R 252
>UniRef50_A4E6S8 Cluster: Putative uncharacterized protein; n=1;
Collinsella aerofaciens ATCC 25986|Rep: Putative
uncharacterized protein - Collinsella aerofaciens ATCC
25986
Length = 305
Score = 72.5 bits (170), Expect = 1e-11
Identities = 60/203 (29%), Positives = 94/203 (46%)
Frame = +1
Query: 13 DKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSPKRR 192
+ L D L+ ++ A++A ++ D + K L T A ++ L E L + P R
Sbjct: 34 EDLEDTLVMGDMGAEVAIQVSDDLRDAAAKKNLKT----APQLRRALAEQLEQHFVPIER 89
Query: 193 VDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAV 372
D D P + F G+NG GK+T + KI + +V+I + DTFRA A+
Sbjct: 90 -DPFSDT--------PSCVLFVGINGAGKTTTVGKIASAMAARGKNVVIGSADTFRAAAI 140
Query: 373 EQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTA 552
EQL + V + ++ G D A + + + A +D+VLIDTA
Sbjct: 141 EQLDVWGQRAG-------------VPVIKRDRGSDPASVCYDVLDEADKRGSDLVLIDTA 187
Query: 553 GRMQDNEPLMRALAKLIRGQRTR 621
GR+ + LMR LAK++ R R
Sbjct: 188 GRLHTSPELMRELAKVVNVTRKR 210
>UniRef50_O67066 Cluster: Cell division protein ftsY homolog; n=5;
Bacteria|Rep: Cell division protein ftsY homolog -
Aquifex aeolicus
Length = 461
Score = 72.5 bits (170), Expect = 1e-11
Identities = 47/147 (31%), Positives = 73/147 (49%), Gaps = 2/147 (1%)
Frame = +1
Query: 166 VRILSPKRRVDILRDCLHAKQ--EGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLI 339
++ L K ++L++C + E V+ F GVNG GK+T + K+ L + VL+
Sbjct: 234 IKELLKKELKELLKNCQGELKIPEKVGAVLLFVGVNGSGKTTTIGKLAHQLKQKGKKVLL 293
Query: 340 AACDTFRAGAVEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASD 519
A DTFRA A+EQL + V + +K G D + E ++ A +
Sbjct: 294 VAGDTFRAAAIEQLEVWAKRAG-------------VDIVKKEEGSDPGAVVYEGMKKAKE 340
Query: 520 TKTDVVLIDTAGRMQDNEPLMRALAKL 600
+VVL+DTAGR+ EPL+ L K+
Sbjct: 341 EGYEVVLVDTAGRLHTKEPLINELRKI 367
>UniRef50_A3ER96 Cluster: Signal recognition particle GTPase; n=1;
Leptospirillum sp. Group II UBA|Rep: Signal recognition
particle GTPase - Leptospirillum sp. Group II UBA
Length = 309
Score = 72.1 bits (169), Expect = 1e-11
Identities = 43/122 (35%), Positives = 62/122 (50%)
Frame = +1
Query: 235 RPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAVEQLRTHTRXXXXXX 414
+P V+ GVNGVGK+T K+ ++ SV++ A DTFRA AV+QLR
Sbjct: 100 KPVVILMVGVNGVGKTTTTGKLAHRFQQDGKSVILGAADTFRAAAVQQLR---------- 149
Query: 415 XXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALA 594
+ + + G D A +A + ++ A K DV +IDTAGR+Q LM L
Sbjct: 150 ---LWGEKLEIPVVHQKEGADPAAVAFDTVKAALARKVDVAIIDTAGRLQTKHNLMAELG 206
Query: 595 KL 600
K+
Sbjct: 207 KI 208
>UniRef50_P57137 Cluster: Cell division protein ftsY homolog; n=2;
Buchnera aphidicola|Rep: Cell division protein ftsY
homolog - Buchnera aphidicola subsp. Acyrthosiphon pisum
(Acyrthosiphon pisumsymbiotic bacterium)
Length = 378
Score = 71.7 bits (168), Expect = 2e-11
Identities = 41/123 (33%), Positives = 66/123 (53%)
Frame = +1
Query: 238 PYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAVEQLRTHTRXXXXXXX 417
P+V+ GVNG GK+T +AK+ S+++AA DTFRA +EQL+T +
Sbjct: 177 PFVILVVGVNGTGKTTTVAKLAEKYKLEGKSIMLAAADTFRAAGIEQLQTLGKLNN---- 232
Query: 418 XXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAK 597
+ + + G D A + +A++ A K DV++IDTAGR+ + L+ L K
Sbjct: 233 ---------IPVIAQRSGSDPAAVIFDAVKSAKSKKIDVLIIDTAGRLHNKLHLIEELKK 283
Query: 598 LIR 606
++R
Sbjct: 284 IVR 286
>UniRef50_A7H885 Cluster: Signal recognition particle-docking
protein FtsY; n=4; Cystobacterineae|Rep: Signal
recognition particle-docking protein FtsY -
Anaeromyxobacter sp. Fw109-5
Length = 465
Score = 70.9 bits (166), Expect = 3e-11
Identities = 61/200 (30%), Positives = 86/200 (43%)
Frame = +1
Query: 7 VLDKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSPK 186
VL L + L ++ A +L +S ++ K L S + +K L E + RIL+
Sbjct: 193 VLADLEEVLFTADIGVRTATRLLESARERVRRKEL----SDPERLKDALREEIARILALD 248
Query: 187 RRVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAG 366
+ R RP+V+ GVNG GK+T + K+ L VL+ A DTFRA
Sbjct: 249 GQPAAARPL--ELGPARPWVVMVVGVNGSGKTTTIGKLASKLQAEGKRVLLGAGDTFRAA 306
Query: 367 AVEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLID 546
A EQL + G D A + EA++ + DVVL D
Sbjct: 307 AGEQLEIWAERVG-------------APIVRGKEGADPASVCFEAVQRGAQDGADVVLCD 353
Query: 547 TAGRMQDNEPLMRALAKLIR 606
TAGR+ PLM L K+ R
Sbjct: 354 TAGRLHTKAPLMEELKKVKR 373
>UniRef50_Q9PR03 Cluster: SRP family of GTP-binding proteins-cell
division protein; n=2; Mycoplasmataceae|Rep: SRP family
of GTP-binding proteins-cell division protein -
Ureaplasma parvum (Ureaplasma urealyticum biotype 1)
Length = 351
Score = 70.5 bits (165), Expect = 4e-11
Identities = 45/125 (36%), Positives = 68/125 (54%)
Frame = +1
Query: 226 QEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAVEQLRTHTRXXX 405
+E + V+ GVNGVGK+T++AKI I+ + VL+ A DTFRAGAVEQL+ +
Sbjct: 138 KENQTNVVLVVGVNGVGKTTSIAKITKKFIDENKKVLLVAGDTFRAGAVEQLKVWAQRLG 197
Query: 406 XXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMR 585
+ L K G+D A + ++ + K D+V+ DT+GR+Q+ LM
Sbjct: 198 VD-----------IELPNK-EGQDPASVIYAGVKKGYEQKYDLVICDTSGRLQNKINLMN 245
Query: 586 ALAKL 600
L K+
Sbjct: 246 ELKKI 250
>UniRef50_Q1VJW0 Cluster: Cell division particle; n=2; Psychroflexus
torquis ATCC 700755|Rep: Cell division particle -
Psychroflexus torquis ATCC 700755
Length = 208
Score = 70.1 bits (164), Expect = 5e-11
Identities = 49/191 (25%), Positives = 93/191 (48%), Gaps = 3/191 (1%)
Frame = +1
Query: 34 IGKNVAADIANKLCDSVA-IKLEGKVLGTFDSVAKTVKATLTESLVRILSPKRRVDILR- 207
I +NV + + S A +++ ++ F+++ K + ++++++ K +++ +
Sbjct: 31 IDENVLTEFEELIITSDAGVEVAKELRKDFENLKVDKKLEDHKEILKLIADKLAINLQKY 90
Query: 208 -DCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAVEQLR 384
L + V+ GVNGVGK+T++ K+ + +N+ SV+ A DTFRA A++QL+
Sbjct: 91 EKDLSLMGNAKSAVIVVSGVNGVGKTTSIGKLGKYFKDNNRSVVFGAADTFRAAAIDQLQ 150
Query: 385 THTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQ 564
V + + D A +A + +A + DV LIDTAGR+Q
Sbjct: 151 V-------------WAAKVKVDIIKSEINSDPASVAFKTAEFAKKNEIDVALIDTAGRLQ 197
Query: 565 DNEPLMRALAK 597
+ + LM K
Sbjct: 198 NKKNLMEEYKK 208
>UniRef50_O05289 Cluster: FtsY protein; n=5; Mollicutes|Rep: FtsY
protein - Mycoplasma mycoides
Length = 412
Score = 70.1 bits (164), Expect = 5e-11
Identities = 44/125 (35%), Positives = 63/125 (50%)
Frame = +1
Query: 226 QEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAVEQLRTHTRXXX 405
+E R + GVNG GK+T+LAK+ + E VLIAA DTF AGA +QL +
Sbjct: 193 KENRLNIFMLVGVNGTGKTTSLAKMANYYAELGYKVLIAAADTFSAGATQQLEEWIK--- 249
Query: 406 XXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMR 585
+ + D A + +AI+ A + D++LIDTAGR+Q+ LM
Sbjct: 250 ------TRLNNKVDLVKANKLNADPASVVFDAIKKAKEQNYDLLLIDTAGRLQNKTNLMA 303
Query: 586 ALAKL 600
L K+
Sbjct: 304 ELEKM 308
>UniRef50_P66843 Cluster: Cell division protein ftsY homolog; n=43;
Actinomycetales|Rep: Cell division protein ftsY homolog
- Mycobacterium bovis
Length = 422
Score = 69.3 bits (162), Expect = 9e-11
Identities = 57/187 (30%), Positives = 81/187 (43%)
Frame = +1
Query: 46 VAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSPKRRVDILRDCLHAK 225
+ AD+ SV +L ++ +A L + L+ L P I R HA
Sbjct: 163 LVADLGPAATASVVSQLRSRLASGNVRTEADARAVLRDVLINELQPGMDRSI-RALPHA- 220
Query: 226 QEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAVEQLRTHTRXXX 405
G P V+ GVNG GK+T + K+ L+ + V++ A DTFRA A +QL+T
Sbjct: 221 --GHPSVLLVVGVNGTGKTTTVGKLARVLVADGRRVVLGAADTFRAAAADQLQTWAARVG 278
Query: 406 XXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMR 585
+ G D A +A +A+ DVVLIDTAGR+ LM
Sbjct: 279 -------------AAVVRGPEGADPASVAFDAVDKGIAAGADVVLIDTAGRLHTKVGLMD 325
Query: 586 ALAKLIR 606
L K+ R
Sbjct: 326 ELDKVKR 332
>UniRef50_Q1VMG0 Cluster: Signal recognition particle-docking
protein FtsY; n=1; Psychroflexus torquis ATCC
700755|Rep: Signal recognition particle-docking protein
FtsY - Psychroflexus torquis ATCC 700755
Length = 238
Score = 68.9 bits (161), Expect = 1e-10
Identities = 44/128 (34%), Positives = 64/128 (50%)
Frame = +1
Query: 223 KQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAVEQLRTHTRXX 402
+++G+P V+ GVNGVGK+T++AK+ +L SV++AA DTFRA A+EQL
Sbjct: 77 RKDGKPTVILVAGVNGVGKTTSVAKLASFLKTRGNSVVLAAADTFRAAAIEQLNIWADRV 136
Query: 403 XXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLM 582
V L Y D + + +A A D ++ DTAGR+ LM
Sbjct: 137 D-------------VPLVSTQYQGDPSAVCFDAHEKAIAIGADYLICDTAGRLHTRHNLM 183
Query: 583 RALAKLIR 606
L K+ R
Sbjct: 184 EELKKISR 191
>UniRef50_Q1V114 Cluster: Cell division particle; n=2; Candidatus
Pelagibacter ubique|Rep: Cell division particle -
Candidatus Pelagibacter ubique HTCC1002
Length = 305
Score = 68.9 bits (161), Expect = 1e-10
Identities = 59/198 (29%), Positives = 92/198 (46%), Gaps = 1/198 (0%)
Frame = +1
Query: 10 LDKLRDHLIGKNVAADIANKLCDSVAI-KLEGKVLGTFDSVAKTVKATLTESLVRILSPK 186
LD++ ++LI +V A ++ +A K++ K + V L +V ++ P
Sbjct: 36 LDQIEEYLIQSDVGLVAAEEIKKIIAQEKIDPK-----KDIMHEVNLILRNYIVTLMKPL 90
Query: 187 RRVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAG 366
+ K+E V+ GVNGVGK+T + K+ L N V+ +ACDTFRA
Sbjct: 91 ENENFFN-----KKEKLNAVLV-SGVNGVGKTTTIGKVGKILKSNGNKVMFSACDTFRAA 144
Query: 367 AVEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLID 546
A+EQL + V + + G D A +A +AI A + VLID
Sbjct: 145 AIEQLESWANKID-------------VQITKSTQGSDPASVAYKAIEEALKNDFNHVLID 191
Query: 547 TAGRMQDNEPLMRALAKL 600
TAGR+Q+ + LM K+
Sbjct: 192 TAGRLQNKKNLMEEYKKI 209
>UniRef50_A6GK47 Cluster: Signal recognition particle-docking
protein FtsY; n=1; Plesiocystis pacifica SIR-1|Rep:
Signal recognition particle-docking protein FtsY -
Plesiocystis pacifica SIR-1
Length = 592
Score = 68.9 bits (161), Expect = 1e-10
Identities = 58/198 (29%), Positives = 90/198 (45%)
Frame = +1
Query: 13 DKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSPKRR 192
D + + L ++ A A L +SV +L+ K + D+V + ++ + ++ I +P+
Sbjct: 311 DDIEEVLFTADIGARTAETLLESVTSELDKKEVADPDAVWEVIRRKALD-ILDIDAPE-- 367
Query: 193 VDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAV 372
+D D PYV+ GVNGVGK+T L K+ +E L+ A DTFRA A
Sbjct: 368 IDYTPD-------PGPYVLLMIGVNGVGKTTTLGKLAARHVEAGRKTLLVAGDTFRAAAG 420
Query: 373 EQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTA 552
EQL R ++ D + + + I D D+VL DTA
Sbjct: 421 EQLEVWARRVG-------------CDIHLGKENADPSSVLFDGITRGRDEGYDIVLCDTA 467
Query: 553 GRMQDNEPLMRALAKLIR 606
GR+ + LM LAK+ R
Sbjct: 468 GRLHTRKELMAELAKMGR 485
>UniRef50_Q68VX4 Cluster: Cell division protein ftsY homolog; n=22;
Rickettsiaceae|Rep: Cell division protein ftsY homolog -
Rickettsia typhi
Length = 303
Score = 68.9 bits (161), Expect = 1e-10
Identities = 41/126 (32%), Positives = 62/126 (49%)
Frame = +1
Query: 229 EGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAVEQLRTHTRXXXX 408
E + ++ CGVNGVGK+T + K+ V +AACDTFRA A+ QL +
Sbjct: 98 ENKLNIILICGVNGVGKTTTIGKLSALYSAQGKKVAVAACDTFRAAAINQLSS------- 150
Query: 409 XXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRA 588
L D A +A AI+ + D++ IDTAGR+ +N+ LM
Sbjct: 151 ------WVDRANALLITGEVSADPASVAYRAIQESIKQNIDILFIDTAGRLHNNKNLMDE 204
Query: 589 LAKLIR 606
L+K+++
Sbjct: 205 LSKIVK 210
>UniRef50_O33010 Cluster: Cell division protein ftsY homolog; n=9;
Actinobacteria (class)|Rep: Cell division protein ftsY
homolog - Mycobacterium leprae
Length = 430
Score = 68.9 bits (161), Expect = 1e-10
Identities = 54/187 (28%), Positives = 80/187 (42%)
Frame = +1
Query: 46 VAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSPKRRVDILRDCLHAK 225
+ AD+ +SV L ++L + + L + L+ L P D+ R
Sbjct: 171 LVADLGPVATESVMSALRSRLLNSNVHTESDARTMLRDVLISELQP----DMDRSIRALP 226
Query: 226 QEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAVEQLRTHTRXXX 405
P V+ GVNG GK+T + K+ L+ + V++ A DTFRA A +QL+T
Sbjct: 227 HADHPAVLLIVGVNGTGKTTTVGKLARVLVADGRRVVLGAADTFRAAAADQLQTWASRVG 286
Query: 406 XXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMR 585
L G D A +A +A+ DVV+IDTAGR+ LM
Sbjct: 287 -------------AELVRGVEGADPASVAFDAVDKGIGAGADVVVIDTAGRLHTKVGLMD 333
Query: 586 ALAKLIR 606
L K+ R
Sbjct: 334 ELDKIKR 340
>UniRef50_Q97QH0 Cluster: Signal recognition particle-docking
protein FtsY; n=20; Firmicutes|Rep: Signal recognition
particle-docking protein FtsY - Streptococcus pneumoniae
Length = 429
Score = 68.5 bits (160), Expect = 2e-10
Identities = 58/198 (29%), Positives = 93/198 (46%)
Frame = +1
Query: 13 DKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSPKRR 192
++L + LI +V +A+ L + ++ E K+ ++ + E LV +
Sbjct: 159 EELEELLIMSDVGVQVASNLTEE--LRYEAKLENA--KKPDVLRRVIIEKLVELYEKDGS 214
Query: 193 VDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAV 372
D + +H + VM F GVNGVGK+T++ K+ + V++ A DTFRAGAV
Sbjct: 215 YD---ESIHFQDNLT--VMLFVGVNGVGKTTSIGKLAHRYKQAGKKVMLVAADTFRAGAV 269
Query: 373 EQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTA 552
QL R +VT EK D A + + + A D+++IDTA
Sbjct: 270 AQLAEWGR----------RVDVPVVTGPEKA---DPASVVFDGMERAVTEGIDILMIDTA 316
Query: 553 GRMQDNEPLMRALAKLIR 606
GR+Q+ + LM L K+ R
Sbjct: 317 GRLQNKDNLMAELEKIGR 334
>UniRef50_Q6MDH1 Cluster: Probable signal recognition particle chain
ffh; n=1; Candidatus Protochlamydia amoebophila
UWE25|Rep: Probable signal recognition particle chain
ffh - Protochlamydia amoebophila (strain UWE25)
Length = 454
Score = 68.5 bits (160), Expect = 2e-10
Identities = 43/126 (34%), Positives = 69/126 (54%), Gaps = 2/126 (1%)
Frame = +1
Query: 229 EGRPYVMAFCGVNGVGKSTNLAKICFWLIENDL--SVLIAACDTFRAGAVEQLRTHTRXX 402
EG+P V+ CG+ G GK+T+ AK+ +L + L + L+AACD R AVEQL+T
Sbjct: 108 EGKPAVIMLCGLQGAGKTTHCAKLAKYLKKKGLCKNPLLAACDLQRPAAVEQLKT----- 162
Query: 403 XXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLM 582
V ++ KD IA +A+++A + + D++++DTAGR+ + LM
Sbjct: 163 --------LGQQIHVPVFTIVGEKDPVRIAKDALKHAQEAQHDLLIVDTAGRLHVDNELM 214
Query: 583 RALAKL 600
L K+
Sbjct: 215 TQLEKI 220
>UniRef50_Q315N5 Cluster: Signal recognition particle-docking
protein FtsY; n=4; Desulfovibrionaceae|Rep: Signal
recognition particle-docking protein FtsY -
Desulfovibrio desulfuricans (strain G20)
Length = 506
Score = 68.5 bits (160), Expect = 2e-10
Identities = 52/150 (34%), Positives = 69/150 (46%)
Frame = +1
Query: 160 SLVRILSPKRRVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLI 339
+L + L + DI R P V+ GVNGVGK+T +AK+ + VLI
Sbjct: 277 ALFKELMREELEDIFRTPRRIAAINPPEVVLMVGVNGVGKTTTIAKLAYRARLQGKKVLI 336
Query: 340 AACDTFRAGAVEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASD 519
AA DTFRA A+EQL+ + KG D A +A EA+ A
Sbjct: 337 AAGDTFRAAAIEQLKVWADRVG-------------AGFHSKGANADPAAVAYEAMDKAVK 383
Query: 520 TKTDVVLIDTAGRMQDNEPLMRALAKLIRG 609
D++ +DTAGR+ LM L K IRG
Sbjct: 384 EGYDILFVDTAGRIHTKVNLMEELQK-IRG 412
>UniRef50_Q6MNR5 Cluster: Signal recognition particle-docking
protein FtsY; n=1; Bdellovibrio bacteriovorus|Rep:
Signal recognition particle-docking protein FtsY -
Bdellovibrio bacteriovorus
Length = 402
Score = 68.1 bits (159), Expect = 2e-10
Identities = 56/199 (28%), Positives = 87/199 (43%)
Frame = +1
Query: 10 LDKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSPKR 189
L+++ + L ++ +L ++ KL K +D+V + +K + S
Sbjct: 127 LEEIEEILYTSDLGPATVQRLMGAIEDKLSKKERADYDTVREALKEEIKNIFQGSHSTSV 186
Query: 190 RVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGA 369
IL A EG P V+ GVNG GK+T++ KI L VL+AA DTFRA A
Sbjct: 187 GTGILSKIQFAA-EG-PTVLMIVGVNGAGKTTSIGKISAQLAAEGKKVLVAAGDTFRAAA 244
Query: 370 VEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDT 549
QL+ T V ++ D + +A +A+ DVV++DT
Sbjct: 245 GGQLKVWT-------------DRAQVEIFSPEGVTDPSAVAFDAVAKGKAQGYDVVIVDT 291
Query: 550 AGRMQDNEPLMRALAKLIR 606
AGR+ LM + K+ R
Sbjct: 292 AGRLHTQANLMEEIKKMKR 310
>UniRef50_Q7UT17 Cluster: Cell division protein FtsY; n=2;
Planctomycetaceae|Rep: Cell division protein FtsY -
Rhodopirellula baltica
Length = 337
Score = 67.7 bits (158), Expect = 3e-10
Identities = 60/199 (30%), Positives = 92/199 (46%)
Frame = +1
Query: 10 LDKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSPKR 189
L +L LI ++ A A ++ D VA G+V+ + V +T+ + E L +
Sbjct: 71 LGELYARLIRTDMGAGPAGRIRDRVAKDFRGRVVH-LEEVVETITQDIREQL-----KQD 124
Query: 190 RVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGA 369
D+ AK + P V+ GVNG GK+T++ K+ L+ +++ A DTFRA A
Sbjct: 125 HGDL------AKADSPPTVILVVGVNGSGKTTSIGKLSHHLVSQGHKIVLGAGDTFRAAA 178
Query: 370 VEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDT 549
VEQL + +VT G D A +A + A + D +IDT
Sbjct: 179 VEQLTIWSE----------RIGCEIVT---GPSGVDPASVAYQTTEKAVEIGADYAIIDT 225
Query: 550 AGRMQDNEPLMRALAKLIR 606
AGR+Q LM+ L K+ R
Sbjct: 226 AGRLQTQGKLMQELEKIRR 244
>UniRef50_O51103 Cluster: Cell division protein, putative; n=3;
Borrelia burgdorferi group|Rep: Cell division protein,
putative - Borrelia burgdorferi (Lyme disease
spirochete)
Length = 281
Score = 66.9 bits (156), Expect = 5e-10
Identities = 36/119 (30%), Positives = 65/119 (54%)
Frame = +1
Query: 244 VMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAVEQLRTHTRXXXXXXXXX 423
++ G+NG+GK++++AK+ L ++LI+A DTFRA A+EQ++ +
Sbjct: 81 ILLIVGINGIGKTSSIAKLANKLKNEGKNILISAADTFRAAAIEQMKIYGEQIG------ 134
Query: 424 XXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKL 600
V + + G D + + ++I A D ++IDTAGR+Q+ E L++ L K+
Sbjct: 135 -------VRIISQNQGSDPSAVIFDSISSAKLKNYDALIIDTAGRLQNKENLIKELQKI 186
>UniRef50_A1RXH9 Cluster: GTP-binding signal recognition particle
SRP54, G-domain; n=1; Thermofilum pendens Hrk 5|Rep:
GTP-binding signal recognition particle SRP54, G-domain
- Thermofilum pendens (strain Hrk 5)
Length = 431
Score = 66.9 bits (156), Expect = 5e-10
Identities = 48/152 (31%), Positives = 72/152 (47%), Gaps = 2/152 (1%)
Frame = +1
Query: 157 ESLVRILSPKRRVDIL--RDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLS 330
E LV+IL + V++L + K P+ + F G+ G GK+T +AK+ +
Sbjct: 71 EVLVKILY-EELVNLLGGEETPELKVSSTPFKVMFVGLEGSGKTTTVAKVANYYKRKGYR 129
Query: 331 VLIAACDTFRAGAVEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRY 510
V + A DT+R GA EQLR+ V Y +DA +A+ ++
Sbjct: 130 VGVVAADTYRPGAYEQLRSLAEKVG-------------VPFYGDPQERDAVSLALRGVKV 176
Query: 511 ASDTKTDVVLIDTAGRMQDNEPLMRALAKLIR 606
SD ++LIDTAGR +D E LM + L R
Sbjct: 177 LSDKGIQMILIDTAGRHKDEEALMEEVKTLYR 208
>UniRef50_P73930 Cluster: Cell division protein ftsY homolog; n=10;
Cyanobacteria|Rep: Cell division protein ftsY homolog -
Synechocystis sp. (strain PCC 6803)
Length = 504
Score = 66.9 bits (156), Expect = 5e-10
Identities = 40/121 (33%), Positives = 60/121 (49%)
Frame = +1
Query: 244 VMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAVEQLRTHTRXXXXXXXXX 423
V GVNG GK+T + K+ F ++ +IAA DTFRA AVEQ++
Sbjct: 303 VWLLTGVNGAGKTTTIGKLAFMAKQSGYDCVIAAADTFRAAAVEQVKV------------ 350
Query: 424 XXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLI 603
+ + G D A + + I A +++L+DTAGR+Q+ + LM LAK+
Sbjct: 351 WGERSGVPVIANPGQNTDPAAVVYDGISAAQSRNVNLLLVDTAGRLQNKKNLMDELAKIR 410
Query: 604 R 606
R
Sbjct: 411 R 411
>UniRef50_Q7VRI6 Cluster: Cell division protein FtsY; n=1;
Candidatus Blochmannia floridanus|Rep: Cell division
protein FtsY - Blochmannia floridanus
Length = 308
Score = 66.1 bits (154), Expect = 9e-10
Identities = 40/122 (32%), Positives = 67/122 (54%)
Frame = +1
Query: 235 RPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAVEQLRTHTRXXXXXX 414
+P+V+ GVNGVGK+T + K+ + + SV+IAA DT RA A++QL T T+
Sbjct: 104 QPFVILVIGVNGVGKTTTVGKLAYHYRSQNKSVMIAAGDTKRAAAIDQLITFTK------ 157
Query: 415 XXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALA 594
+++ D+A I A++ A ++++IDTAGR+Q+N ++ L
Sbjct: 158 ------NIDSISIIANYSTSDSASIIFNAMQKALSQNINILIIDTAGRLQNNIHNIQELQ 211
Query: 595 KL 600
K+
Sbjct: 212 KI 213
>UniRef50_A4RQK2 Cluster: IISP family transporter: signal
recognition particle protein; n=2; Ostreococcus|Rep:
IISP family transporter: signal recognition particle
protein - Ostreococcus lucimarinus CCE9901
Length = 498
Score = 65.3 bits (152), Expect = 2e-09
Identities = 40/123 (32%), Positives = 62/123 (50%)
Frame = +1
Query: 223 KQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAVEQLRTHTRXX 402
+ +G P V+ G+ GVGK+T K+ L + SVL+ A D +R A++QL+T +
Sbjct: 102 RDDGEPTVVLMAGLQGVGKTTACGKLSLALRKQGKSVLLVATDVYRPAAIDQLKTLGKQI 161
Query: 403 XXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLM 582
V +++ G + IA +R A D DVV++DTAGR+ +E LM
Sbjct: 162 G-------------VPVFDMGVDGNPPEIAARGVRKAKDEDIDVVIVDTAGRLNIDEKLM 208
Query: 583 RAL 591
L
Sbjct: 209 GEL 211
>UniRef50_Q7NP07 Cluster: Glr0251 protein; n=7; Cyanobacteria|Rep:
Glr0251 protein - Gloeobacter violaceus
Length = 774
Score = 64.9 bits (151), Expect = 2e-09
Identities = 45/129 (34%), Positives = 62/129 (48%)
Frame = +1
Query: 220 AKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAVEQLRTHTRX 399
A + G+ V GVNGVGK+T + KI + LIAA DTFRA AVEQL
Sbjct: 561 APKRGQLNVWLIVGVNGVGKTTTIGKIAALATRSGYRTLIAAGDTFRAAAVEQL------ 614
Query: 400 XXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPL 579
+ + D A + +AI A +++L+DTAGR+Q+ + L
Sbjct: 615 ------SIWGERSGVTVVANPSPKADPAAVVFDAISAAKARDVELLLVDTAGRLQNKKNL 668
Query: 580 MRALAKLIR 606
M LAK+ R
Sbjct: 669 MDELAKVRR 677
>UniRef50_Q89B28 Cluster: Cell division protein ftsY homolog; n=1;
Buchnera aphidicola (Baizongia pistaciae)|Rep: Cell
division protein ftsY homolog - Buchnera aphidicola
subsp. Baizongia pistaciae
Length = 397
Score = 64.9 bits (151), Expect = 2e-09
Identities = 41/122 (33%), Positives = 64/122 (52%)
Frame = +1
Query: 241 YVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAVEQLRTHTRXXXXXXXX 420
+V+ GVNGVGK+T + K+ + SV++AA DTFRA A++QL+
Sbjct: 192 FVILVVGVNGVGKTTLIGKLAKNYKKKGKSVILAAGDTFRAAAIDQLK------------ 239
Query: 421 XXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKL 600
V++ + G D A + +AI+ A D+++IDTAGR+ + LM L K+
Sbjct: 240 -LWGEINSVSVITREIGSDPASVVYDAIKIAKLKCIDILIIDTAGRLHNKNNLMEELKKI 298
Query: 601 IR 606
R
Sbjct: 299 KR 300
>UniRef50_Q1AW79 Cluster: Signal recognition particle-docking
protein FtsY; n=1; Rubrobacter xylanophilus DSM
9941|Rep: Signal recognition particle-docking protein
FtsY - Rubrobacter xylanophilus (strain DSM 9941 / NBRC
16129)
Length = 348
Score = 63.7 bits (148), Expect = 5e-09
Identities = 56/187 (29%), Positives = 85/187 (45%)
Frame = +1
Query: 46 VAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSPKRRVDILRDCLHAK 225
+A+D+ + +LE + L + A ++ L E R+L +D+
Sbjct: 92 IASDVGVPTTAKLVQRLEQEALEKNITGAGELRRLLVEHAARMLEGPVEIDLSH------ 145
Query: 226 QEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAVEQLRTHTRXXX 405
RP V+ GVNG GK+T + K+ L SV+ AA DTFRA A+EQL+
Sbjct: 146 ---RPTVILMVGVNGTGKTTTIGKLARHLPAR--SVMFAAGDTFRAAAIEQLQ------- 193
Query: 406 XXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMR 585
V E+ G DAA +A +A+ A +V+++DTAGR+ LM
Sbjct: 194 ----KWGERVGAPVVARER--GADAAAVAHDAVEAAKREGVEVLIVDTAGRLHTKVNLMA 247
Query: 586 ALAKLIR 606
L K+ R
Sbjct: 248 ELEKVRR 254
>UniRef50_O15821 Cluster: Signal recognition particle 54 kDa
protein; n=3; Entamoeba histolytica|Rep: Signal
recognition particle 54 kDa protein - Entamoeba
histolytica
Length = 487
Score = 63.7 bits (148), Expect = 5e-09
Identities = 42/195 (21%), Positives = 87/195 (44%)
Frame = +1
Query: 7 VLDKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSPK 186
+L ++ L+G++V ++ +++ K+ + + K +K ++ E L+ ++ PK
Sbjct: 31 LLKEIETSLLGEDVNPIFIRQMVNNIKKKINSEDIPDGIDKRKLIKDSVFEELINLVDPK 90
Query: 187 RRVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAG 366
++G+ V+ G+ G GK+T + K+ + + DTFRAG
Sbjct: 91 TEA-------FKPKKGKTCVLMMVGLQGAGKTTTITKLALYYKNRGYKPAVVGADTFRAG 143
Query: 367 AVEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLID 546
A EQL+ + + V + D +A E +R K D++L+D
Sbjct: 144 AYEQLQMNAKRAG-------------VPFFGIKEESDPVKVASEGVRTFRKEKNDIILVD 190
Query: 547 TAGRMQDNEPLMRAL 591
T+GR + ++ L + +
Sbjct: 191 TSGRHKQDKELFKEM 205
>UniRef50_P14929 Cluster: Cell division protein ftsY homolog; n=28;
Neisseria|Rep: Cell division protein ftsY homolog -
Neisseria gonorrhoeae
Length = 416
Score = 63.7 bits (148), Expect = 5e-09
Identities = 48/156 (30%), Positives = 80/156 (51%)
Frame = +1
Query: 139 VKATLTESLVRILSPKRRVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIE 318
++ L E+L ++ P + +L + K+ P+V+ G+NG GK+T++ K+ +
Sbjct: 190 LRGALKEALYDLIKPLEKPLVLPE---TKE---PFVIMLAGINGAGKTTSIGKLAKYFQA 243
Query: 319 NDLSVLIAACDTFRAGAVEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAME 498
SVL+AA DTFRA A EQL+ VT+ + G D+A + +
Sbjct: 244 QGKSVLLAAGDTFRAAAREQLQA-------------WGGRNNVTVISQTTG-DSAAVCFD 289
Query: 499 AIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIR 606
A++ A+ + D+VL DTAGR+ LM + K+ R
Sbjct: 290 AVQ-AAKARIDIVLADTAGRLPTQLHLMEEIKKVKR 324
>UniRef50_Q9RS67 Cluster: Signal recognition particle-docking
protein FtsY; n=2; Deinococcus|Rep: Signal recognition
particle-docking protein FtsY - Deinococcus radiodurans
Length = 317
Score = 63.3 bits (147), Expect = 6e-09
Identities = 54/199 (27%), Positives = 91/199 (45%)
Frame = +1
Query: 10 LDKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSPKR 189
++ L LI +V ++ + + EG++ D++ + + L + R + R
Sbjct: 39 IEDLEYALIAADVGRAATEEIIEDIRKNGEGRLQ---DALMRALTLQLEPNARR--AQFR 93
Query: 190 RVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGA 369
+ D +K + + +V+ GVNGVGK+T +AK+ + +E SV+ AA DTFRA A
Sbjct: 94 ELGFSPDVSRSKVDPKGHVVMVIGVNGVGKTTTIAKLGQYYMERGQSVMFAAGDTFRAAA 153
Query: 370 VEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDT 549
QL V + + G D A +A +A TD++ +DT
Sbjct: 154 GTQLGVWGERLG-------------VPVIQGVDGGDPAAVAFDAAGARKARGTDLLFVDT 200
Query: 550 AGRMQDNEPLMRALAKLIR 606
AGR+ + LM L K+ R
Sbjct: 201 AGRLHNKHNLMEELKKVRR 219
>UniRef50_Q1ILB3 Cluster: Signal recognition particle-docking
protein FtsY; n=6; Bacteria|Rep: Signal recognition
particle-docking protein FtsY - Acidobacteria bacterium
(strain Ellin345)
Length = 320
Score = 62.9 bits (146), Expect = 8e-09
Identities = 51/187 (27%), Positives = 81/187 (43%)
Frame = +1
Query: 46 VAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSPKRRVDILRDCLHAK 225
+AAD+ + V L+ KV +K L ++R+L+ +R
Sbjct: 60 IAADLGSVTTAEVLQALKDKVDRKQVQSTDEIKGVLKAEILRLLNEAAAKSPVRTV---- 115
Query: 226 QEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAVEQLRTHTRXXX 405
+ P V+ GVNG GK+T + K+ L VL+ A DTFRA A++QL
Sbjct: 116 -DQPPEVILVVGVNGTGKTTTIGKLSNLLRAQGKQVLLCAADTFRAAAIDQLEVWGERTG 174
Query: 406 XXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMR 585
V + + G D + + +A++ A D V++DTAGR+ + LM
Sbjct: 175 -------------VEVIKTKPGGDPSAVLFDALQAAKARAVDYVIVDTAGRLHTKQNLML 221
Query: 586 ALAKLIR 606
L K+ R
Sbjct: 222 ELEKMKR 228
>UniRef50_Q01442 Cluster: Signal recognition particle protein; n=15;
Bacteria|Rep: Signal recognition particle protein -
Mycoplasma mycoides
Length = 447
Score = 62.9 bits (146), Expect = 8e-09
Identities = 56/202 (27%), Positives = 95/202 (47%), Gaps = 2/202 (0%)
Frame = +1
Query: 1 RPVLDKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILS 180
+ L ++R L+ +V + A ++ ++V K G + S + + + E LV IL
Sbjct: 30 KETLKEIRLSLLEADVNIEAAKEIINNVKQKALGGYISEGASAHQQMIKIVHEELVNILG 89
Query: 181 PKRR-VDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIE-NDLSVLIAACDT 354
+ +DI + +P V+ G+ G GK+T K+ + L + N VL+ D
Sbjct: 90 KENAPLDINK---------KPSVVMMVGLQGSGKTTTANKLAYLLNKKNKKKVLLVGLDI 140
Query: 355 FRAGAVEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDV 534
+R GA+EQL ++EKG +D A +A+ YA + DV
Sbjct: 141 YRPGAIEQL-------------VQLGQKTNTQVFEKGK-QDPVKTAEQALEYAKENNFDV 186
Query: 535 VLIDTAGRMQDNEPLMRALAKL 600
V++DTAGR+Q ++ LM+ L L
Sbjct: 187 VILDTAGRLQVDQVLMKELDNL 208
>UniRef50_A1IE17 Cluster: Cell division protein FtsY; n=2;
Bacteria|Rep: Cell division protein FtsY - Candidatus
Desulfococcus oleovorans Hxd3
Length = 381
Score = 62.5 bits (145), Expect = 1e-08
Identities = 53/187 (28%), Positives = 77/187 (41%)
Frame = +1
Query: 46 VAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSPKRRVDILRDCLHAK 225
+ ADI K + L + G D +K + E ++ L R D L
Sbjct: 124 ITADIGVKATTELIAGLSKQAAGITDP--DHLKEAIKEMILPYLEDDRPTDEATRPL--- 178
Query: 226 QEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAVEQLRTHTRXXX 405
P+V+ GVNGVGK+T + K+ N V++ A DTFRA A+EQL
Sbjct: 179 --ATPHVIMVIGVNGVGKTTTIGKLAARHRANGKKVMLVAADTFRAAAIEQLSIWADRTG 236
Query: 406 XXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMR 585
+ + D A +A + + A DVV++DTAGR+ LM
Sbjct: 237 -------------ADILKHRENSDPAAVAYDGVEAARARGVDVVIVDTAGRLHTKVNLME 283
Query: 586 ALAKLIR 606
L K+ R
Sbjct: 284 ELKKIKR 290
>UniRef50_Q9SWS7 Cluster: Chloroplast SRP receptor homolog, alpha
subunit CPFTSY; n=6; Magnoliophyta|Rep: Chloroplast SRP
receptor homolog, alpha subunit CPFTSY - Arabidopsis
thaliana (Mouse-ear cress)
Length = 366
Score = 62.5 bits (145), Expect = 1e-08
Identities = 53/193 (27%), Positives = 84/193 (43%)
Frame = +1
Query: 13 DKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSPKRR 192
D++ D L + +D K+ + +L ++ +K L ES++ +L+ K
Sbjct: 94 DRVLDELEEALLVSDFGPKITVRIVERLREDIMSGKLKSGSEIKDALKESVLEMLAKKNS 153
Query: 193 VDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAV 372
L+ +P V+ GVNG GK+T+L K+ L VL+AA DTFRA A
Sbjct: 154 KTELQLGFR-----KPAVIMIVGVNGGGKTTSLGKLAHRLKNEGTKVLMAAGDTFRAAAS 208
Query: 373 EQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTA 552
+QL + +G AA + +A++ + DVVL DT+
Sbjct: 209 DQLEIWAERTGCE------------IVVAEGDKAKAATVLSKAVKRGKEEGYDVVLCDTS 256
Query: 553 GRMQDNEPLMRAL 591
GR+ N LM L
Sbjct: 257 GRLHTNYSLMEEL 269
>UniRef50_A7PXY2 Cluster: Chromosome chr15 scaffold_37, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr15 scaffold_37, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 367
Score = 62.5 bits (145), Expect = 1e-08
Identities = 54/195 (27%), Positives = 88/195 (45%)
Frame = +1
Query: 7 VLDKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSPK 186
VLD+L + L+ + I K+ +S L +L +K L +S++ +L+ K
Sbjct: 97 VLDELEEALLVSDFGPRITIKIVES----LRDDILAGKLKSGSEIKDALKKSVLDLLTKK 152
Query: 187 RRVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAG 366
L+ +P V+ GVNG GK+T+L K+ + L + VL+AA DTFRA
Sbjct: 153 GSKTALQLGFR-----KPAVVIIVGVNGGGKTTSLGKLAYKLKKEGAKVLMAAGDTFRAA 207
Query: 367 AVEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLID 546
A +QL + +G A+ + +A++ + D+VL D
Sbjct: 208 ASDQLEIWAERTGCE------------IVVAEGEKAKASSVLSQAVKRGKEQGFDIVLCD 255
Query: 547 TAGRMQDNEPLMRAL 591
T+GR+ N LM L
Sbjct: 256 TSGRLHTNYSLMEEL 270
>UniRef50_P74214 Cluster: Signal recognition particle protein; n=38;
Cyanobacteria|Rep: Signal recognition particle protein -
Synechocystis sp. (strain PCC 6803)
Length = 482
Score = 62.5 bits (145), Expect = 1e-08
Identities = 39/127 (30%), Positives = 64/127 (50%)
Frame = +1
Query: 220 AKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAVEQLRTHTRX 399
A+ E P V+ G+ G GK+T AK+ +L + S L+ A D +R A++QL+T +
Sbjct: 94 AQAEQAPTVILMAGLQGTGKTTATAKLALYLRKQKRSALMVATDVYRPAAIDQLKTLGQQ 153
Query: 400 XXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPL 579
V +++ G + IA + + A + D VLIDTAGR+Q + +
Sbjct: 154 ID-------------VPVFDLGSDANPVEIARQGVEKAKELGVDTVLIDTAGRLQIDPQM 200
Query: 580 MRALAKL 600
M LA++
Sbjct: 201 MAELAEI 207
>UniRef50_A6DNU8 Cluster: Signal recognition particle; n=1;
Lentisphaera araneosa HTCC2155|Rep: Signal recognition
particle - Lentisphaera araneosa HTCC2155
Length = 469
Score = 61.7 bits (143), Expect = 2e-08
Identities = 50/201 (24%), Positives = 89/201 (44%), Gaps = 1/201 (0%)
Frame = +1
Query: 1 RPVLDKLRDHLIGKNVAADIANKLCDSVAIKLEG-KVLGTFDSVAKTVKATLTESLVRIL 177
+ ++++R L+ +V D N+ V+ + G KVL + + VK + E L R++
Sbjct: 28 KEAMEQVRLALLSADVHYDTVNEFVGEVSRQCLGEKVLKSVKPSEQVVKV-VHEELTRLM 86
Query: 178 SPKRRVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTF 357
+ G P V+ G++G GK+T AK+ + VL+AACD +
Sbjct: 87 GTEEA--------EVNTSGNPAVIMMVGLHGAGKTTTCAKLAHFYKNQKKKVLLAACDVY 138
Query: 358 RAGAVEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVV 537
R A++QL V ++ D IA A+ A D+V
Sbjct: 139 RPAAIDQLEA-------------LGKDIQVPVFSDRSTPDVVQIAQNAMNTAKSEGHDLV 185
Query: 538 LIDTAGRMQDNEPLMRALAKL 600
++D AGR+Q +E +++ L ++
Sbjct: 186 ILDMAGRLQIDEDMVQELIRV 206
>UniRef50_Q014I0 Cluster: Chloroplast SRP receptor cpFtsY; n=2;
Ostreococcus|Rep: Chloroplast SRP receptor cpFtsY -
Ostreococcus tauri
Length = 354
Score = 61.3 bits (142), Expect = 2e-08
Identities = 51/195 (26%), Positives = 87/195 (44%), Gaps = 1/195 (0%)
Frame = +1
Query: 10 LDKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSPKR 189
L++L + L+G + + ++ D V ++E T + V + +KA++ + L R
Sbjct: 80 LEELEETLLGVDFGPKASARVTDGVRARVERGECETGEDVRRALKASIVDVL-RSAGDST 138
Query: 190 RVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGA 369
+ + ++EG P V+ GVNG GK+T L K+ E+ V++ DTFRA A
Sbjct: 139 TIGL------NEREGEPSVIMVVGVNGGGKTTTLGKLSHRFAESGAKVMMVPGDTFRAAA 192
Query: 370 VEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYA-SDTKTDVVLID 546
EQL T + + + +A+ A + D+VL D
Sbjct: 193 AEQLATWAERTG-------------AVMSDSPPNTKPGAVCFKAVDEACARGDIDIVLAD 239
Query: 547 TAGRMQDNEPLMRAL 591
T+GR+ +N LM L
Sbjct: 240 TSGRLHNNTQLMDEL 254
>UniRef50_Q7VPR9 Cluster: FtsY cell division protein; n=8;
Chlamydiaceae|Rep: FtsY cell division protein -
Chlamydia pneumoniae (Chlamydophila pneumoniae)
Length = 310
Score = 59.7 bits (138), Expect = 8e-08
Identities = 45/157 (28%), Positives = 70/157 (44%)
Frame = +1
Query: 133 KTVKATLTESLVRILSPKRRVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWL 312
K A+ + L+ +L + ++ L + RP V G NG GK+T AK+ +
Sbjct: 70 KKADASTIKDLITVLL-RESLEGLPSQASQSSQTRPIVSLLLGTNGSGKTTTAAKLAHYY 128
Query: 313 IENDLSVLIAACDTFRAGAVEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIA 492
E SV++ A DTFRA ++Q R G DAA IA
Sbjct: 129 KERSESVMLVATDTFRAAGMDQARLWANELGCGFVSGQP-------------GGDAAAIA 175
Query: 493 MEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLI 603
+ I+ A V+IDT+GR+ + LM+ L+K++
Sbjct: 176 FDGIQSAIARGYSRVIIDTSGRLHVHGNLMKELSKIV 212
>UniRef50_A4E6S7 Cluster: Putative uncharacterized protein; n=1;
Collinsella aerofaciens ATCC 25986|Rep: Putative
uncharacterized protein - Collinsella aerofaciens ATCC
25986
Length = 461
Score = 59.3 bits (137), Expect = 1e-07
Identities = 51/164 (31%), Positives = 78/164 (47%), Gaps = 11/164 (6%)
Frame = +1
Query: 127 VAKTVKATLTESLVRILSPKRRV-----DILRDCLHAKQEGR------PYVMAFCGVNGV 273
VAKT + +T ++ LSP + V D L + L + + P V+ G+ G
Sbjct: 22 VAKTKERCMTAEVMESLSPAQNVVKIVLDELTEMLGSTESKLVFSNRIPNVIMLVGLQGS 81
Query: 274 GKSTNLAKICFWLIENDLSVLIAACDTFRAGAVEQLRTHTRXXXXXXXXXXXXXXXMVTL 453
GK+T K+ + L + S L+ ACD +R A +QL T V +
Sbjct: 82 GKTTAAVKLAYLLKKQGRSPLLVACDVYRPAAADQLAT-------------LGGEIGVPV 128
Query: 454 YEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMR 585
+ +G G IA AI+ A D DVV++DTAGR+Q +E +M+
Sbjct: 129 F-RGDGAHPVDIAKGAIQEAVDHLRDVVIVDTAGRLQIDEQMMQ 171
>UniRef50_P56005 Cluster: Signal recognition particle protein; n=13;
Campylobacterales|Rep: Signal recognition particle
protein - Helicobacter pylori (Campylobacter pylori)
Length = 448
Score = 58.8 bits (136), Expect = 1e-07
Identities = 54/198 (27%), Positives = 90/198 (45%), Gaps = 1/198 (0%)
Frame = +1
Query: 10 LDKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKT-VKATLTESLVRILSPK 186
LD+ D L + D+ +K+ + K+E + + + K L +SL+ ILS K
Sbjct: 25 LDRALDELKKTLLKNDVHHKVARELLKKVESQT--KLNGIGKQQFLDALEKSLLEILSAK 82
Query: 187 RRVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAG 366
+ P V+ G+ G GK+T AK+ +L + VL+ ACD R
Sbjct: 83 GSSGF------TFAQTPPTVVLMAGLQGSGKTTTTAKLAHYLKTKNKKVLLCACDLQRLA 136
Query: 367 AVEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLID 546
AVEQL+ + YE+ K IA A++ A + + DV+L+D
Sbjct: 137 AVEQLKV------------LGEQVGVEVFYEE--NKSVKEIASNALKRAKEAQFDVLLVD 182
Query: 547 TAGRMQDNEPLMRALAKL 600
+AGR+ ++ LM+ L ++
Sbjct: 183 SAGRLAIDKELMQELKEV 200
>UniRef50_Q73L22 Cluster: Signal recognition particle-docking
protein FtsY; n=1; Treponema denticola|Rep: Signal
recognition particle-docking protein FtsY - Treponema
denticola
Length = 292
Score = 58.4 bits (135), Expect = 2e-07
Identities = 39/122 (31%), Positives = 63/122 (51%), Gaps = 1/122 (0%)
Frame = +1
Query: 259 GVNGVGKSTNLAKICFWLIEN-DLSVLIAACDTFRAGAVEQLRTHTRXXXXXXXXXXXXX 435
GVNGVGK+T++ K+ + E +++AA DTFRA A+EQL+ H
Sbjct: 95 GVNGVGKTTSIGKMAHYYKEKYGTPIILAAGDTFRAAAIEQLKFHGEKND---------- 144
Query: 436 XXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIRGQR 615
V + +G D + +A + + +VL DTAGR+ + + L+R L K+ R +
Sbjct: 145 ---VRVVAHQHGGDPGAVIFDAGDAMASSGGGLVLADTAGRLHNKDNLVRELQKIDRIAK 201
Query: 616 TR 621
T+
Sbjct: 202 TK 203
>UniRef50_P75362 Cluster: Cell division protein ftsY homolog; n=4;
Mycoplasma|Rep: Cell division protein ftsY homolog -
Mycoplasma pneumoniae
Length = 348
Score = 58.4 bits (135), Expect = 2e-07
Identities = 52/196 (26%), Positives = 91/196 (46%)
Frame = +1
Query: 13 DKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSPKRR 192
+ L + L+ ++ A K+CD++ +L+ + + S + ++ + + L+
Sbjct: 69 ESLFEELVLLDIGYHAATKICDAIVQELKLQRV----SDPQLIQEIIVDKLIVYYIQ--- 121
Query: 193 VDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAV 372
D L + + + V F GVNGVGK+T+LAK+ L + + VL+ A DTFRAGAV
Sbjct: 122 -DKLFETDLTVEANKTNVYLFVGVNGVGKTTSLAKLADQLTKQNKRVLMVAGDTFRAGAV 180
Query: 373 EQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTA 552
QL + +V K ++ + ++ + D VL DT+
Sbjct: 181 AQLAEWAQ----------RIGCDIVLPNPK---EETPAVIFRGVQQGIQNEYDFVLCDTS 227
Query: 553 GRMQDNEPLMRALAKL 600
GR+Q+ LM L K+
Sbjct: 228 GRLQNKTNLMNELKKI 243
>UniRef50_A4XLF5 Cluster: Signal recognition particle protein; n=2;
Bacteria|Rep: Signal recognition particle protein -
Caldicellulosiruptor saccharolyticus (strain ATCC 43494
/ DSM 8903)
Length = 443
Score = 57.6 bits (133), Expect = 3e-07
Identities = 35/114 (30%), Positives = 53/114 (46%)
Frame = +1
Query: 259 GVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAVEQLRTHTRXXXXXXXXXXXXXX 438
G+ G GK+T K+ L + L+ ACD +R A++QL
Sbjct: 107 GLQGSGKTTTAGKLAALLKKQGKKPLLIACDIYRPAAIKQLEVVAEKVG----------- 155
Query: 439 XMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKL 600
V+ Y KDA IA+E + +A + D+ ++DTAGR+ NE LM L +
Sbjct: 156 --VSCYADYDKKDAVKIAVEGVNFAKSNRFDIAIVDTAGRLHINEELMNELVAI 207
>UniRef50_Q5U794 Cluster: Signal recognition particle GTPase; n=1;
Azospirillum lipoferum|Rep: Signal recognition particle
GTPase - Azospirillum lipoferum
Length = 276
Score = 57.2 bits (132), Expect = 4e-07
Identities = 41/125 (32%), Positives = 65/125 (52%)
Frame = +1
Query: 10 LDKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSPKR 189
L++L + LI ++ A K+ +A GK + + VK+TL + +I++P
Sbjct: 139 LEELEELLITADLGPATAAKVTAELARTRFGKEVSP-----EEVKSTLAAEVAKIVTPVA 193
Query: 190 RVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGA 369
R +L L +P+V+ GVNG GK+T + K+ SV++AA DTFRA A
Sbjct: 194 RPLVLDPAL------KPHVILVVGVNGTGKTTTIGKLARQFKAEGKSVMLAAGDTFRAAA 247
Query: 370 VEQLR 384
V QL+
Sbjct: 248 VSQLK 252
>UniRef50_O25458 Cluster: Cell division protein ftsY homolog; n=17;
Epsilonproteobacteria|Rep: Cell division protein ftsY
homolog - Helicobacter pylori (Campylobacter pylori)
Length = 293
Score = 57.2 bits (132), Expect = 4e-07
Identities = 39/124 (31%), Positives = 56/124 (45%)
Frame = +1
Query: 235 RPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAVEQLRTHTRXXXXXX 414
+P V GVNG GK+T +AK+ ++ L+ A DTFRA AV+QL+
Sbjct: 85 KPLVHLIVGVNGAGKTTTIAKLAKLSLKQHKKALLGAGDTFRAAAVKQLQ---------- 134
Query: 415 XXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALA 594
+ + G D + +A I A D V IDTAGR+ + L L+
Sbjct: 135 ---LWGEKLNIQVISAKEGSDPSSLAYNTIESAIAKNIDEVFIDTAGRLHNQTNLKNELS 191
Query: 595 KLIR 606
K+ R
Sbjct: 192 KIAR 195
>UniRef50_O83587 Cluster: Cell division protein; n=1; Treponema
pallidum|Rep: Cell division protein - Treponema pallidum
Length = 295
Score = 56.8 bits (131), Expect = 5e-07
Identities = 48/168 (28%), Positives = 74/168 (44%), Gaps = 1/168 (0%)
Frame = +1
Query: 130 AKTVKATLTESLVRILSPKRRVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKIC-F 306
A ++ TE +R L + +R A + + GVNG GK+T+ AK+ +
Sbjct: 54 AARTRSVHTEDALRTLFAEIMESCVRVTHLAPNPNQCSLYLLLGVNGSGKTTSAAKLAAY 113
Query: 307 WLIENDLSVLIAACDTFRAGAVEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAG 486
+ + +L AA DTFRA A EQL H V + GKD A
Sbjct: 114 YQTQKVHPILFAAADTFRAAAAEQLAHHGAQLG-------------VRVIAHPGGKDPAA 160
Query: 487 IAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIRGQRTRHGA 630
+ +A K ++L+DTAGR+ + L+ L K+ R +T+ A
Sbjct: 161 VVFDAGEALRAQKRGLLLVDTAGRLHNKTHLIAELQKIDRIAQTKVSA 208
>UniRef50_UPI00006CE525 Cluster: SRP54-type protein, GTPase domain
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: SRP54-type protein, GTPase domain containing
protein - Tetrahymena thermophila SB210
Length = 460
Score = 56.4 bits (130), Expect = 7e-07
Identities = 44/149 (29%), Positives = 72/149 (48%), Gaps = 2/149 (1%)
Frame = +1
Query: 133 KTVKATLTESLVRILSPKRRVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKIC-FW 309
K ++ + + L ++L PK++ L+ G+P V+ F G+ G GK+T AK +W
Sbjct: 71 KLIQQLVVQELTKMLDPKKQPFSLKS-------GKPNVVMFVGLQGAGKTTTCAKYANYW 123
Query: 310 LIENDLSVLIAACDTFRAGAVEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGI 489
+ + LI A DTFRAGA +QL+ + Y D I
Sbjct: 124 KKKGWRTCLICA-DTFRAGAFDQLQ-------------QIATKIRIPFYGNRTETDPVAI 169
Query: 490 AMEAIRYASDTKTDVVLIDTAGR-MQDNE 573
A+E ++ +V++IDT+GR MQ++E
Sbjct: 170 AIEGVKTFQKQNFEVIIIDTSGRHMQESE 198
>UniRef50_O51637 Cluster: Signal recognition particle protein; n=4;
Borrelia|Rep: Signal recognition particle protein -
Borrelia burgdorferi (Lyme disease spirochete)
Length = 447
Score = 56.0 bits (129), Expect = 9e-07
Identities = 50/198 (25%), Positives = 94/198 (47%), Gaps = 1/198 (0%)
Frame = +1
Query: 10 LDKLRDHLIGKNVAADIANKLCDSVAIKLEG-KVLGTFDSVAKTVKATLTESLVRILSPK 186
++ +++ L+ +V + + +S+ + +G KVL D ++ +K + ++LV+ L K
Sbjct: 34 IEIIKNSLVDADVNLRVIRRFLNSIIEESKGVKVLRGIDPKSQFIKI-VNDNLVKFLGGK 92
Query: 187 RRVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAG 366
LH + + Y++ G+ G GK+T AK+ L + + VL+ A DTFRA
Sbjct: 93 N----YELSLHPANK-QSYILML-GLQGSGKTTTCAKLSLKLKKENRKVLLVAADTFRAA 146
Query: 367 AVEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLID 546
AVEQL+ V ++ KD I ++++A D V++D
Sbjct: 147 AVEQLK-------------ILGGQVGVPVFSIEGEKDPIKIVKASMKFAESNFFDSVIVD 193
Query: 547 TAGRMQDNEPLMRALAKL 600
T GR++ L+ + K+
Sbjct: 194 TRGRLEIESLLVEEIKKI 211
>UniRef50_Q5AK67 Cluster: Putative uncharacterized protein; n=2;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 104
Score = 56.0 bits (129), Expect = 9e-07
Identities = 35/77 (45%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Frame = -2
Query: 380 SCSTAPARNVSHAAISTDRSFSINQKQIFARFVDLPTPFTPQNAMT*GLP-SCLACRQSR 204
+CSTAP VS A I+T + F NQK A+FVDLPTP TP +T GL S S
Sbjct: 24 NCSTAPDSKVSQAQINTFKLFCKNQKASLAKFVDLPTPLTPTTDITYGLVLSSAFLFISC 83
Query: 203 RMSTRRFGDSIRTRDSV 153
S FG +I SV
Sbjct: 84 NKSVETFGVNILVNSSV 100
>UniRef50_A6Q553 Cluster: Signal recognition particle protein; n=12;
Epsilonproteobacteria|Rep: Signal recognition particle
protein - Nitratiruptor sp. (strain SB155-2)
Length = 452
Score = 55.6 bits (128), Expect = 1e-06
Identities = 53/200 (26%), Positives = 90/200 (45%)
Frame = +1
Query: 1 RPVLDKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILS 180
+ L +L+ L+ +V + +L V + + +G D+ + ++ LTE L +
Sbjct: 26 KKALTELKKSLLKSDVHHKVVKELLQKVELDTKAAGIGR-DTFLQALQKNLTEILT---A 81
Query: 181 PKRRVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFR 360
P + + ++A + P V+ G+ G GK+T K+ +L VL+ A D R
Sbjct: 82 PGAK----QGFVYASKP--PTVVLMTGLQGSGKTTTSGKLANYLKLRGKKVLLVAADLQR 135
Query: 361 AGAVEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVL 540
AVEQLR V + + KD + +A++ A + DVV+
Sbjct: 136 LAAVEQLR-------------QIASQIEVDFFGEDDQKDPVKVVNDALKLAREKLYDVVI 182
Query: 541 IDTAGRMQDNEPLMRALAKL 600
IDTAGR+ +E LM L K+
Sbjct: 183 IDTAGRLAIDEALMEELKKV 202
>UniRef50_O07347 Cluster: Signal recognition particle protein; n=15;
Bacteria|Rep: Signal recognition particle protein -
Thermus aquaticus
Length = 430
Score = 55.6 bits (128), Expect = 1e-06
Identities = 54/200 (27%), Positives = 87/200 (43%)
Frame = +1
Query: 1 RPVLDKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILS 180
+ L ++R L+ +V ++A + V + GK + + A+ + AT+ E+L L
Sbjct: 28 KATLREIRRALMDADVNLEVARDFVERVREEALGKQVLESLTPAEVILATVYEALKEALG 87
Query: 181 PKRRVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFR 360
+ R+ +L+D + G+ G GK+T AK+ + L+ A DT R
Sbjct: 88 GEARLPVLKD---------RNLWFLVGLQGSGKTTTAAKLALYYKGKGRRPLLVAADTQR 138
Query: 361 AGAVEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVL 540
A EQLR V + E G+ I A D++L
Sbjct: 139 PAAREQLR-------------LLGEKVGVPVLEVMDGESPESIRRRVEEKARLEARDLIL 185
Query: 541 IDTAGRMQDNEPLMRALAKL 600
+DTAGR+Q +EPLM LA+L
Sbjct: 186 VDTAGRLQIDEPLMGELARL 205
>UniRef50_Q54431 Cluster: Signal recognition particle protein; n=76;
Firmicutes|Rep: Signal recognition particle protein -
Streptococcus mutans
Length = 516
Score = 55.6 bits (128), Expect = 1e-06
Identities = 52/197 (26%), Positives = 89/197 (45%), Gaps = 2/197 (1%)
Frame = +1
Query: 7 VLDKLRDHLIGKNVAADIANKLCDSVAIKLEG-KVLGTFDSVAKTVKATLTESLVRILSP 183
V ++R L+ +VA + + V + G +V+ T D + +K + E L +L
Sbjct: 31 VTKEIRLALLEADVALPVVKEFIKRVRKRAVGHEVIDTLDPSQQIIKI-VNEELTAVLGS 89
Query: 184 KRRVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLI-ENDLSVLIAACDTFR 360
+ +I K P ++ G+ G GK+T K+ L+ E + L+ A D +R
Sbjct: 90 ET-AEI------EKSSKIPTIIMMVGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYR 142
Query: 361 AGAVEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVL 540
A++QL+T + V +++ G A I + + A + + D VL
Sbjct: 143 PAAIDQLKTLGQQIN-------------VPVFDMGTEHSAVEIVSQGLAQAKENRNDYVL 189
Query: 541 IDTAGRMQDNEPLMRAL 591
IDTAGR+Q +E LM L
Sbjct: 190 IDTAGRLQIDEKLMTEL 206
>UniRef50_A6DB28 Cluster: Signal recognition particle protein; n=1;
Caminibacter mediatlanticus TB-2|Rep: Signal recognition
particle protein - Caminibacter mediatlanticus TB-2
Length = 449
Score = 55.2 bits (127), Expect = 2e-06
Identities = 58/201 (28%), Positives = 93/201 (46%), Gaps = 1/201 (0%)
Frame = +1
Query: 1 RPVLDKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILS 180
+ LD+L+ +L+ +V +L V I+ + +G A +KA L E+L IL+
Sbjct: 26 KKALDELKKNLLKADVHFKTVKELLRKVEIETKKAGIGR----ANFLKA-LEEALKEILT 80
Query: 181 PKRRVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIE-NDLSVLIAACDTF 357
+ +A + P V+ G+ G GK+T AK+ ++L VL+ A D
Sbjct: 81 APGNYGFV----YASKP--PTVVMMTGLQGSGKTTTTAKLAYYLKNFKKKKVLMVAADLQ 134
Query: 358 RAGAVEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVV 537
R AVEQLR + Y++ K+A +A + + A + DVV
Sbjct: 135 RLAAVEQLR------------QLAEQNELDIFYDEN-AKNAVEVAKKGVEEAKNKFYDVV 181
Query: 538 LIDTAGRMQDNEPLMRALAKL 600
LIDTAGR+ +E LM L ++
Sbjct: 182 LIDTAGRLAIDEALMNELIEM 202
>UniRef50_A7DS34 Cluster: GTP-binding signal recognition particle
SRP54, G-domain; n=1; Candidatus Nitrosopumilus
maritimus SCM1|Rep: GTP-binding signal recognition
particle SRP54, G-domain - Candidatus Nitrosopumilus
maritimus SCM1
Length = 442
Score = 55.2 bits (127), Expect = 2e-06
Identities = 34/123 (27%), Positives = 57/123 (46%)
Frame = +1
Query: 232 GRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAVEQLRTHTRXXXXX 411
G+ + G+ G GK+T +K+ +L V + DT+R GA+ QL+T
Sbjct: 97 GKQNKIILLGIQGSGKTTVASKLAKFLTGQGYKVGVVGADTYRPGALVQLKTMCEKSN-- 154
Query: 412 XXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRAL 591
V +Y + KD+ I + Y D DV+LIDTAGR ++ + L+ +
Sbjct: 155 -----------VEVYGEESNKDSPSIVKNGLNYFKDQSLDVILIDTAGRHKEEQDLLEEM 203
Query: 592 AKL 600
++
Sbjct: 204 DRI 206
>UniRef50_Q8ZT95 Cluster: Signal recognition 54 kDa protein; n=5;
Thermoproteaceae|Rep: Signal recognition 54 kDa protein
- Pyrobaculum aerophilum
Length = 433
Score = 54.8 bits (126), Expect = 2e-06
Identities = 37/121 (30%), Positives = 57/121 (47%)
Frame = +1
Query: 223 KQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAVEQLRTHTRXX 402
K +PY++ GV G GK+T AK+ +L + V + DT R A +QLR
Sbjct: 94 KPTKKPYIVLLLGVEGSGKTTTAAKLAKYLAKRGYKVGLVETDTIRPAAFDQLRQLAEKI 153
Query: 403 XXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLM 582
V Y + GKDA IA ++ + DV+++DTAGR ++ E L+
Sbjct: 154 G-------------VPFYGERDGKDAVEIAKRGVQ--NFKNMDVIIVDTAGRHRNEEALL 198
Query: 583 R 585
+
Sbjct: 199 K 199
>UniRef50_Q6BNS1 Cluster: Debaryomyces hansenii chromosome E of
strain CBS767 of Debaryomyces hansenii; n=4;
Saccharomycetales|Rep: Debaryomyces hansenii chromosome
E of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 568
Score = 54.4 bits (125), Expect = 3e-06
Identities = 47/196 (23%), Positives = 85/196 (43%), Gaps = 1/196 (0%)
Frame = +1
Query: 16 KLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSPKRRV 195
KLRD++ K V I ++ + K K++ FD + V + + LS +++
Sbjct: 48 KLRDNIKAK-VKTQINDEESSTNKRKKLQKIV--FDELCSLVDSHEEPPKPKKLSQQQQK 104
Query: 196 D-ILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAV 372
LR K G +V+ F G+ G GK+T+ K+ + + V + DTFRAGA
Sbjct: 105 SKTLRGKKATKVTGESHVIMFVGLQGAGKTTSCTKLAVYYKKRGYKVGLVCADTFRAGAF 164
Query: 373 EQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTA 552
+QL+ + + Y D +A E + K D++++DT+
Sbjct: 165 DQLKQNA-------------IKSSIPYYGSYIETDPVKVAYEGVVKFKQEKFDIIIVDTS 211
Query: 553 GRMQDNEPLMRALAKL 600
GR + + L + ++
Sbjct: 212 GRHKQEQSLFNEMIQI 227
>UniRef50_Q895M4 Cluster: Signal recognition particle, subunit
ffh/srp54; n=18; Bacteria|Rep: Signal recognition
particle, subunit ffh/srp54 - Clostridium tetani
Length = 451
Score = 53.6 bits (123), Expect = 5e-06
Identities = 48/201 (23%), Positives = 88/201 (43%), Gaps = 1/201 (0%)
Frame = +1
Query: 1 RPVLDKLRDHLIGKNVAADIANKLCDSVAIKLEGK-VLGTFDSVAKTVKATLTESLVRIL 177
+ + ++R L+ +V I SV+ K GK VL + + VK E + +
Sbjct: 29 KEAMREVRLALLEADVNYKIVKDFVKSVSEKCNGKEVLESLTPGQQVVKIVNDELIELMG 88
Query: 178 SPKRRVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTF 357
S + ++ + +P V+ G+ G GK+T K+ L + + L+ ACD +
Sbjct: 89 SKESEINF--------EANKPTVIMLVGLQGAGKTTMAGKLALQLRKKNKKPLLVACDIY 140
Query: 358 RAGAVEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVV 537
R A++QL+ V ++ G + I+ AI++A + + +
Sbjct: 141 RPAAIKQLQV-------------VGSQIDVPVFTLGDKTNPVDISKAAIKHAKENNLNTI 187
Query: 538 LIDTAGRMQDNEPLMRALAKL 600
+IDTAGR+ +E LM L +
Sbjct: 188 IIDTAGRLHIDENLMDELKSI 208
>UniRef50_Q9Z966 Cluster: Signal Recognition Particle GTPase; n=8;
Chlamydiaceae|Rep: Signal Recognition Particle GTPase -
Chlamydia pneumoniae (Chlamydophila pneumoniae)
Length = 448
Score = 53.2 bits (122), Expect = 7e-06
Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 2/123 (1%)
Frame = +1
Query: 238 PYVMAFCGVNGVGKSTNLAKICFWLIENDLS--VLIAACDTFRAGAVEQLRTHTRXXXXX 411
P ++ CG+ G GK+T AK+ ++I+N + VL+ CD R AV+QL+
Sbjct: 99 PSIILLCGLQGAGKTTTAAKLADYVIKNKKAKKVLVVPCDLKRFAAVDQLK--------- 149
Query: 412 XXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRAL 591
Y+ K + ++A+ YA + D V++DTAGR+ + LM L
Sbjct: 150 ----ILVAQTKAEFYQSQENK-PINVVVKALAYAKENGHDFVILDTAGRLNIDNELMEEL 204
Query: 592 AKL 600
+
Sbjct: 205 TAI 207
>UniRef50_Q8KD87 Cluster: Signal recognition particle protein; n=18;
Bacteroidetes/Chlorobi group|Rep: Signal recognition
particle protein - Chlorobium tepidum
Length = 449
Score = 53.2 bits (122), Expect = 7e-06
Identities = 47/184 (25%), Positives = 85/184 (46%)
Frame = +1
Query: 31 LIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSPKRRVDILRD 210
L+ +V +A KL + + K G+ + S A+ + + + L I+ + +
Sbjct: 38 LLSADVNYKVAKKLVEDIREKSLGESVIKSVSPAQMIVKIVNDELTEIMGGQNQP----- 92
Query: 211 CLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAVEQLRTH 390
L+ + P ++ G+ G GK+T AK+ L +N + ++ A D +R AVEQL+T
Sbjct: 93 -LNLPPKKIPAIVMVAGLQGSGKTTFCAKLAKRLKKNGKNPILVAADVYRPAAVEQLKT- 150
Query: 391 TRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDN 570
+ ++ E +DA A+ + A DVV++DTAGR+Q +
Sbjct: 151 ---------LGEQIDVPVFSIEE----QDAMKAALGGLEAAKAGAKDVVIVDTAGRLQID 197
Query: 571 EPLM 582
E +M
Sbjct: 198 EAMM 201
>UniRef50_Q6YPP7 Cluster: Signal recognition particle GTPase; n=2;
Candidatus Phytoplasma asteris|Rep: Signal recognition
particle GTPase - Onion yellows phytoplasma
Length = 426
Score = 53.2 bits (122), Expect = 7e-06
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 2/199 (1%)
Frame = +1
Query: 10 LDKLRDHLIGKNVAADIANKLCDSVAIK-LEGKVLGTFDSVAKTVKATLTESLVRILSPK 186
+ ++ L+ +V + +K + + K L+ +VL + +K + E+L++IL
Sbjct: 1 MQDIKVSLVEADVHLQVIDKFNEIIEKKTLKQEVLKGLNPKEHIIKI-VNETLIQILG-S 58
Query: 187 RRVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIE-NDLSVLIAACDTFRA 363
R D L K + G+ G GK+T + K+ WL + N VL+ ACD +R
Sbjct: 59 TRAD-----LTFKPNCNLDTLMLIGLQGSGKTTTVGKLALWLRKKNSKKVLLVACDIYRP 113
Query: 364 GAVEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLI 543
GAVEQL+ + + ++ K I +++A D V+I
Sbjct: 114 GAVEQLKVIGKQIN-------------IDVFSKP-DTAVLDIVDAGLKHALQEGYDAVII 159
Query: 544 DTAGRMQDNEPLMRALAKL 600
DTAGR+ +E +M+ L ++
Sbjct: 160 DTAGRLDIDETMMQELQQI 178
>UniRef50_Q8SS36 Cluster: SIGNAL RECOGNITION PARTICLE 54kDa SUBUNIT;
n=1; Encephalitozoon cuniculi|Rep: SIGNAL RECOGNITION
PARTICLE 54kDa SUBUNIT - Encephalitozoon cuniculi
Length = 466
Score = 53.2 bits (122), Expect = 7e-06
Identities = 50/193 (25%), Positives = 84/193 (43%), Gaps = 1/193 (0%)
Frame = +1
Query: 31 LIGKNVAADIANKLCDSVAIKLE-GKVLGTFDSVAKTVKATLTESLVRILSPKRRVDILR 207
LI NV + L D + KL+ GK+ F+ A+ V+ + E LV +L P+
Sbjct: 37 LILSNVNPRYVSDLRDELRAKLDPGKMAPGFNK-ARMVQNAVYERLVDLLDPRTES---- 91
Query: 208 DCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAVEQLRT 387
+ ++GR V+ F G+ G GK+T++ K + + V I DTFRAGA +Q+R
Sbjct: 92 ---YKIEKGRTSVVVFVGLQGSGKTTSICKYANFYKKKGYKVGIVCADTFRAGAFDQVRQ 148
Query: 388 HTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQD 567
+ V + D +A + + +++L+DT+GR
Sbjct: 149 NA-------------LKIKVPFFGSSEA-DPVKVASAGVERFRKERFELILVDTSGRHTQ 194
Query: 568 NEPLMRALAKLIR 606
L + +IR
Sbjct: 195 ETELFTEMKDIIR 207
>UniRef50_P37107 Cluster: Signal recognition particle 54 kDa
protein, chloroplast precursor; n=24; Magnoliophyta|Rep:
Signal recognition particle 54 kDa protein, chloroplast
precursor - Arabidopsis thaliana (Mouse-ear cress)
Length = 564
Score = 53.2 bits (122), Expect = 7e-06
Identities = 36/118 (30%), Positives = 57/118 (48%)
Frame = +1
Query: 238 PYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAVEQLRTHTRXXXXXXX 417
P V+ G+ GVGK+T AK+ +L + S ++ A D +R A++QL
Sbjct: 176 PTVILLAGLQGVGKTTVCAKLACYLKKQGKSCMLIAGDVYRPAAIDQL------------ 223
Query: 418 XXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRAL 591
V +Y G A IA + ++ A DVV++DTAGR+Q ++ +M L
Sbjct: 224 -VILGEQVGVPVYTAGTDVKPADIAKQGLKEAKKNNVDVVIMDTAGRLQIDKGMMDEL 280
>UniRef50_A7HFQ6 Cluster: Signal recognition particle protein; n=4;
Cystobacterineae|Rep: Signal recognition particle
protein - Anaeromyxobacter sp. Fw109-5
Length = 550
Score = 52.8 bits (121), Expect = 9e-06
Identities = 54/204 (26%), Positives = 86/204 (42%), Gaps = 6/204 (2%)
Frame = +1
Query: 13 DKLRD---HLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAK-TVKATLTESLVRILS 180
D LRD L+ +V+ D+ + V K G+V+ T K V+ T + V+I
Sbjct: 29 DALRDIRVSLLEADVSFDVVKRFVARVREKAIGEVVDTKVKTEKGVVRVTPQDHFVKICH 88
Query: 181 PKRRVDI--LRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDT 354
+ + + L + GRP + G+ G GK+T KI L++ L+ A D
Sbjct: 89 DELEALMGPVDTSLRHGERGRPTGIMMVGLQGSGKTTTAGKIASKLLKEGKRPLLVAADV 148
Query: 355 FRAGAVEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDV 534
+R AV+QL+ + +E G + A A K +V
Sbjct: 149 YRPAAVDQLKV------------LGERLGVPVFHEPGVSPPE--MCRHAFEAAPREKANV 194
Query: 535 VLIDTAGRMQDNEPLMRALAKLIR 606
V+ DTAGR+ +E LM L ++ R
Sbjct: 195 VIYDTAGRLAVDEELMVELEEIKR 218
>UniRef50_Q7R3W6 Cluster: GLP_68_88884_87292; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_68_88884_87292 - Giardia lamblia
ATCC 50803
Length = 530
Score = 52.8 bits (121), Expect = 9e-06
Identities = 51/204 (25%), Positives = 86/204 (42%), Gaps = 6/204 (2%)
Frame = +1
Query: 10 LDKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGT---FDSVAKT---VKATLTESLVR 171
++ L D IG AAD+ + + + + K+L + A T V+ + + LV
Sbjct: 28 VNALVDEFIGVLEAADVPARTLEPMRKSMTTKILSDPAIMEGRANTHQVVQRIVVQELVS 87
Query: 172 ILSPKRRVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACD 351
+LSP+R R V+ F G+ G GK+T K + V + CD
Sbjct: 88 MLSPERPP-------FRPVRNRANVIMFVGLQGAGKTTTCVKFGAYYKRKGWRVGLVCCD 140
Query: 352 TFRAGAVEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTD 531
TFR GA +QL+ + + Y KD IA + +++ +
Sbjct: 141 TFRTGAFDQLKQN-------------CTAVKLPFYGSYSEKDPVQIAQDGVKHFVSLNFE 187
Query: 532 VVLIDTAGRMQDNEPLMRALAKLI 603
++++DT+GR + E L + KLI
Sbjct: 188 LIILDTSGRHRQEEALFTEM-KLI 210
>UniRef50_Q8C1Y6 Cluster: Colon RCB-0549 Cle-H3 cDNA, RIKEN
full-length enriched library, clone:G430060P17
product:signal recognition particle 54 kDa, full insert
sequence; n=17; Eukaryota|Rep: Colon RCB-0549 Cle-H3
cDNA, RIKEN full-length enriched library,
clone:G430060P17 product:signal recognition particle 54
kDa, full insert sequence - Mus musculus (Mouse)
Length = 502
Score = 52.4 bits (120), Expect = 1e-05
Identities = 30/124 (24%), Positives = 56/124 (45%)
Frame = +1
Query: 229 EGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAVEQLRTHTRXXXX 408
+G+P V+ F G+ G GK+T +K+ ++ + DTFRAGA +QL+ +
Sbjct: 98 KGKPNVIMFVGLQGSGKTTTCSKLAYYYQRKGWKTCLICADTFRAGAFDQLKQNA----- 152
Query: 409 XXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRA 588
+ Y D IA E + + +++++DT+GR Q + L
Sbjct: 153 --------TQARIPFYGSYTEMDPVIIASEGVEKFQNENFEIIIVDTSGRHQQEDSLFEE 204
Query: 589 LAKL 600
+ ++
Sbjct: 205 MLQV 208
>UniRef50_Q7UI11 Cluster: Signal recognition particle protein; n=2;
Planctomycetaceae|Rep: Signal recognition particle
protein - Rhodopirellula baltica
Length = 491
Score = 52.0 bits (119), Expect = 2e-05
Identities = 55/203 (27%), Positives = 87/203 (42%), Gaps = 1/203 (0%)
Frame = +1
Query: 1 RPVLDKLRDHLIGKNVAADIANKLCDSVAIKLEGK-VLGTFDSVAKTVKATLTESLVRIL 177
R L + L+ +V+ + V+ K GK VL + + V+ E LV L
Sbjct: 28 RDGLKIVEQSLLEADVSYSVVKDFMGHVSEKALGKRVLLSLRPQEELVRIVYDE-LVETL 86
Query: 178 SPKRRVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTF 357
P VD L+ K +G P ++ CG+ G GK+T K+ L E +++ L+ A D
Sbjct: 87 GP---VD---SALNLKADG-PTIIMLCGLQGSGKTTTCGKLTKLLQEQNITPLLVAADLQ 139
Query: 358 RAGAVEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVV 537
R A+EQL+ V ++ + KD + + A VV
Sbjct: 140 RPAAIEQLKV-------------IGSQLGVPVHAETDHKDPVKVCQAGVEMARRDGNRVV 186
Query: 538 LIDTAGRMQDNEPLMRALAKLIR 606
++DTAGR+ + LM L K+ R
Sbjct: 187 ILDTAGRLAIDAELMAELKKIDR 209
>UniRef50_Q5PAC1 Cluster: Signal recognition particle protein; n=14;
Rickettsiales|Rep: Signal recognition particle protein -
Anaplasma marginale (strain St. Maries)
Length = 451
Score = 52.0 bits (119), Expect = 2e-05
Identities = 49/188 (26%), Positives = 87/188 (46%), Gaps = 6/188 (3%)
Frame = +1
Query: 46 VAADIANKLCDS-VAIKLEGKVLGTFDSV---AKTVKATLTESLVRILSPKRRVDIL-RD 210
V D+ L D+ V + + + +G S + VK L E ++ L + +++L +
Sbjct: 30 VLEDVTQALLDADVNLMVVEQFIGDVKSKIVGGEVVKGVLPEQMIIKLMEECLIEVLGNE 89
Query: 211 CLHAKQEGR-PYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAVEQLRT 387
G+ P + G+ GVGK+TN K+ F L +++ VL+A+ D +R A EQL
Sbjct: 90 KSELDLSGKAPVAIMMVGLQGVGKTTNTVKVAFKLKKSEKKVLVASLDVYRPAAQEQLGV 149
Query: 388 HTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQD 567
+ + + E G+ IA A++ A DVV++DTAGR+
Sbjct: 150 LAQ----------GVGVDSLPIVE---GELPLDIAKRAMKEAKRGGYDVVIVDTAGRLHI 196
Query: 568 NEPLMRAL 591
++ ++ L
Sbjct: 197 DQEMIGEL 204
>UniRef50_P20424 Cluster: Signal recognition particle subunit SRP54;
n=27; Fungi/Metazoa group|Rep: Signal recognition
particle subunit SRP54 - Saccharomyces cerevisiae
(Baker's yeast)
Length = 541
Score = 52.0 bits (119), Expect = 2e-05
Identities = 31/119 (26%), Positives = 54/119 (45%)
Frame = +1
Query: 244 VMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAVEQLRTHTRXXXXXXXXX 423
++ F G+ G GK+T+ K+ + + V + DTFRAGA +QL+ +
Sbjct: 111 IIMFVGLQGSGKTTSCTKLAVYYSKRGFKVGLVCADTFRAGAFDQLKQNA---------- 160
Query: 424 XXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKL 600
+ Y D A +A E I K D++++DT+GR E L + + ++
Sbjct: 161 ---IRARIPFYGSYTETDPAKVAEEGINKFKKEKFDIIIVDTSGRHHQEEELFQEMIEI 216
>UniRef50_O67615 Cluster: Signal recognition particle protein; n=3;
Bacteria|Rep: Signal recognition particle protein -
Aquifex aeolicus
Length = 454
Score = 52.0 bits (119), Expect = 2e-05
Identities = 53/197 (26%), Positives = 87/197 (44%)
Frame = +1
Query: 10 LDKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSPKR 189
L ++R L+ +V +A + K+ GK + S A+ V T+ E LV IL ++
Sbjct: 31 LREIRLALLEADVDYQVAKDFIKRIREKVVGKEVPKNLSPAEFVIKTVYEELVDILGGEK 90
Query: 190 RVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGA 369
D+ + + F G+ G GK+T + KI L + V +++ D R A
Sbjct: 91 -ADLKKG-----------TVLFVGLQGTGKTTTIGKIANLLKKGGHKVAVSSTDLRRPAA 138
Query: 370 VEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDT 549
+ QL+ V YE G A IA A++ A + D +L+DT
Sbjct: 139 MLQLQRLAERVG-------------VPYYEFEEGLGAVEIARRAVKRAKEESVDYLLLDT 185
Query: 550 AGRMQDNEPLMRALAKL 600
AGR+ +E LM+ L ++
Sbjct: 186 AGRLHVDEELMKELQEI 202
>UniRef50_P49966 Cluster: Signal recognition particle 54 kDa protein
2; n=8; Magnoliophyta|Rep: Signal recognition particle
54 kDa protein 2 - Arabidopsis thaliana (Mouse-ear
cress)
Length = 495
Score = 51.6 bits (118), Expect = 2e-05
Identities = 31/127 (24%), Positives = 56/127 (44%)
Frame = +1
Query: 220 AKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAVEQLRTHTRX 399
A ++ +P V+ F G+ G GK+T K ++ + + DTFRAGA +QL+ +
Sbjct: 95 APKKAKPRVVMFVGLQGSGKTTTCTKYAYYHQKKGYKPALVCADTFRAGAFDQLKQNA-- 152
Query: 400 XXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPL 579
+ Y G D IA+E + D++++DT+GR + L
Sbjct: 153 -----------TKSKIPYYGSYTGSDPVKIAVEGVDRFKKENCDLIIVDTSGRHKQQASL 201
Query: 580 MRALAKL 600
+ ++
Sbjct: 202 FEEMRQI 208
>UniRef50_Q67K29 Cluster: Flagellar GTP-binding protein; n=1;
Symbiobacterium thermophilum|Rep: Flagellar GTP-binding
protein - Symbiobacterium thermophilum
Length = 478
Score = 51.2 bits (117), Expect = 3e-05
Identities = 42/127 (33%), Positives = 61/127 (48%), Gaps = 1/127 (0%)
Frame = +1
Query: 226 QEGRPYVMAFCGVNGVGKSTNLAKIC-FWLIENDLSVLIAACDTFRAGAVEQLRTHTRXX 402
+ GR V+A G GVGK+T LAK+ + +E L V + DTFR AV+QLRT+
Sbjct: 282 EAGRRRVVALIGPTGVGKTTTLAKLAAHFALERGLKVGLITADTFRIAAVDQLRTYA--- 338
Query: 403 XXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLM 582
+ LY D +A+ + +D D+VL+DT GR +E M
Sbjct: 339 ----------DILAIPLYTVERPTD----VHQALAHNAD--ADLVLMDTGGRSHKDEERM 382
Query: 583 RALAKLI 603
L +L+
Sbjct: 383 AELQELL 389
>UniRef50_Q5QUU7 Cluster: Signal recognition particle GTPase; n=4;
Proteobacteria|Rep: Signal recognition particle GTPase -
Idiomarina loihiensis
Length = 454
Score = 51.2 bits (117), Expect = 3e-05
Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 1/122 (0%)
Frame = +1
Query: 238 PYVMAFCGVNGVGKSTNLAKICFWLIENDLS-VLIAACDTFRAGAVEQLRTHTRXXXXXX 414
P V+ G+ G GK+T++ K+ +L E V++ + D +R A++QL T
Sbjct: 100 PAVILMAGLQGAGKTTSVGKLAKYLTERQKKKVMVVSADVYRPAAIKQLETLAEQVG--- 156
Query: 415 XXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALA 594
V + + IA AI A DVVL+DTAGR+ +E +M+ +
Sbjct: 157 ----------VEFFPSSTDQKPVDIANAAIAQARKQFIDVVLVDTAGRLAIDEDMMQEIQ 206
Query: 595 KL 600
+L
Sbjct: 207 QL 208
>UniRef50_P37106 Cluster: Signal recognition particle 54 kDa protein
1; n=5; Eukaryota|Rep: Signal recognition particle 54
kDa protein 1 - Arabidopsis thaliana (Mouse-ear cress)
Length = 479
Score = 51.2 bits (117), Expect = 3e-05
Identities = 31/127 (24%), Positives = 56/127 (44%)
Frame = +1
Query: 220 AKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAVEQLRTHTRX 399
A ++ +P V+ F G+ G GK+T K ++ + + DTFRAGA +QL+ +
Sbjct: 95 APKKAKPSVVMFVGLQGAGKTTTCTKYAYYHQKKGYKAALVCADTFRAGAFDQLKQNA-- 152
Query: 400 XXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPL 579
+ Y D IA+E + K D++++DT+GR + L
Sbjct: 153 -----------TKAKIPFYGSYTESDPVKIAVEGVDRFKKEKCDLIIVDTSGRHKQAASL 201
Query: 580 MRALAKL 600
+ ++
Sbjct: 202 FEEMRQV 208
>UniRef50_A6Q2M1 Cluster: Flagellar biosynthesis protein FlhF; n=1;
Nitratiruptor sp. SB155-2|Rep: Flagellar biosynthesis
protein FlhF - Nitratiruptor sp. (strain SB155-2)
Length = 391
Score = 50.4 bits (115), Expect = 5e-05
Identities = 26/55 (47%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Frame = +1
Query: 226 QEGRPYVMAFCGVNGVGKSTNLAKICFWLIEND-LSVLIAACDTFRAGAVEQLRT 387
Q+G V+AF G GVGK+TNL KI L+ N L + + + DTF+ GAV+Q R+
Sbjct: 191 QKGNFKVIAFVGPTGVGKTTNLFKIASELVINQKLKIAVISIDTFKVGAVQQARS 245
>UniRef50_A4MIB2 Cluster: GTP-binding signal recognition particle
SRP54, G-domain; n=1; Geobacter bemidjiensis Bem|Rep:
GTP-binding signal recognition particle SRP54, G-domain
- Geobacter bemidjiensis Bem
Length = 484
Score = 50.4 bits (115), Expect = 5e-05
Identities = 36/128 (28%), Positives = 65/128 (50%), Gaps = 9/128 (7%)
Frame = +1
Query: 40 KNVAADIANKLCDSVAIKLEGKVLGT------FDSVAKTVKATLTESLVRILSPKRRVDI 201
++V A L D++A +L+G+ +G +++ + +R L + +
Sbjct: 216 QSVRASQGELLLDALAAELQGEDVGPEAIELLMEAIRPAARGGAGIGELRNLMAEALAGM 275
Query: 202 LR--DCLHAKQEGRPYVMAFCGVNGVGKSTNLAKIC-FWLIENDLSVLIAACDTFRAGAV 372
++ L K+ G P ++A G GVGK+T +AKI + + +SV + D FR GAV
Sbjct: 276 IKCSGSLRIKKTG-PRIVAVVGPTGVGKTTTIAKIAALYALNRRVSVAMVTMDNFRVGAV 334
Query: 373 EQLRTHTR 396
EQL+T+ +
Sbjct: 335 EQLKTYAK 342
>UniRef50_A7TKC3 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 577
Score = 50.4 bits (115), Expect = 5e-05
Identities = 43/203 (21%), Positives = 90/203 (44%), Gaps = 6/203 (2%)
Frame = +1
Query: 10 LDKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLG-TFDSVAKTVKATLTESLVRILSPK 186
+D L +++ + AD+ +L + ++ K+L ++ +T K+ T+ L++
Sbjct: 29 VDILLKNIVTALLEADVNIQLVSKLRANIKAKLLDQNSNNNNQTSKSGQTKKLIQKTVFD 88
Query: 187 RRVDILRDCLHAKQEGRPY-----VMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACD 351
+++ +Q+ P ++ F G+ G GK+T+ K+ + + V + D
Sbjct: 89 ELCNLVDGNTDQQQQFIPKKRKTNIIMFVGLQGSGKTTSCTKLAVYYQKRGFKVGLVCAD 148
Query: 352 TFRAGAVEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTD 531
TFRAGA +QL+ + + Y D +A E I K D
Sbjct: 149 TFRAGAFDQLKQNA-------------IKAHIPFYGSYTEADPVRVASEGIAKFKKEKFD 195
Query: 532 VVLIDTAGRMQDNEPLMRALAKL 600
++++DT+GR + E L + + ++
Sbjct: 196 IIIVDTSGRHRQEEQLFQEMIEI 218
>UniRef50_O83431 Cluster: Signal recognition particle protein; n=2;
Treponema|Rep: Signal recognition particle protein -
Treponema pallidum
Length = 452
Score = 50.0 bits (114), Expect = 6e-05
Identities = 40/133 (30%), Positives = 61/133 (45%), Gaps = 4/133 (3%)
Frame = +1
Query: 214 LHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAVEQLRTHT 393
LH K ++ G+ G GK+T+ AK+ +L + S L+AACD RA A QL
Sbjct: 93 LHLKGPDTQSIILLLGLQGSGKTTSAAKLAAYLKDAGRSPLLAACDHVRAAASAQLAV-- 150
Query: 394 RXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAME----AIRYASDTKTDVVLIDTAGRM 561
V +Y+ + A++ A++YA DV++IDTAGR+
Sbjct: 151 -----------LGTHIGVPVYQHALPHEQQPCALDTARGALQYARSHGNDVLIIDTAGRL 199
Query: 562 QDNEPLMRALAKL 600
+ LM+ L L
Sbjct: 200 HVDAALMQELILL 212
>UniRef50_A3DCP5 Cluster: GTP-binding signal recognition particle
SRP54, G-domain; n=2; Clostridium|Rep: GTP-binding
signal recognition particle SRP54, G-domain -
Clostridium thermocellum (strain ATCC 27405 / DSM 1237)
Length = 403
Score = 50.0 bits (114), Expect = 6e-05
Identities = 58/200 (29%), Positives = 94/200 (47%), Gaps = 1/200 (0%)
Frame = +1
Query: 7 VLDKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSPK 186
VLD ++L+ V +I +L V K++ V SV++T A++ +L+ + K
Sbjct: 145 VLDLFYNNLLKNEVDTEIVKQLISVVRGKVKENV-----SVSET--ASILYNLISEMMGK 197
Query: 187 RRVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICF-WLIENDLSVLIAACDTFRA 363
LR+ +G+P V+ G GVGK+T LAKI + + + +V + DT+R
Sbjct: 198 PSDIKLRN------DGKPTVVMLVGPTGVGKTTTLAKIAANYSLNLNKNVGLITADTYRI 251
Query: 364 GAVEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLI 543
AVEQL+T+ + +Y +A +AI+ SD D++LI
Sbjct: 252 AAVEQLKTYA----------DILGMPLKVIY-------SANEIQDAIKEYSD--KDLILI 292
Query: 544 DTAGRMQDNEPLMRALAKLI 603
DTAGR N+ L L+
Sbjct: 293 DTAGRSYKNKEHFDELKTLV 312
>UniRef50_A0RUN9 Cluster: Signal recognition particle GTPase; n=1;
Cenarchaeum symbiosum|Rep: Signal recognition particle
GTPase - Cenarchaeum symbiosum
Length = 397
Score = 49.6 bits (113), Expect = 8e-05
Identities = 35/123 (28%), Positives = 55/123 (44%)
Frame = +1
Query: 232 GRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAVEQLRTHTRXXXXX 411
GR + G+ G GKST AK+ L + DT+R GA+ QLRT
Sbjct: 55 GRTNKVLMLGIQGSGKSTITAKLAKLLTRQGYKTGVVGADTYRPGALVQLRTMCERSN-- 112
Query: 412 XXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRAL 591
V +Y + DA + +R+ D+ DV+L+DTAGR ++ L+ +
Sbjct: 113 -----------VEVYGEEGESDAPAVVRRGLRHFGDS-CDVILVDTAGRHKEEGELLDEM 160
Query: 592 AKL 600
++
Sbjct: 161 KRI 163
>UniRef50_Q4PB16 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 638
Score = 49.2 bits (112), Expect = 1e-04
Identities = 29/125 (23%), Positives = 56/125 (44%)
Frame = +1
Query: 226 QEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAVEQLRTHTRXXX 405
++G+P V+ F G+ G GK+T+ K+ + + + DTFRAGA +QL+ +
Sbjct: 124 KKGKPNVIMFVGLQGSGKTTSCTKLALYYQKRGFKTGLVCADTFRAGAFDQLKQNASKIN 183
Query: 406 XXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMR 585
V Y D I+ + + +V+++DT+GR + + L
Sbjct: 184 -------------VPFYGSYTETDPVAISAAGVASFKQNRFEVIIVDTSGRHKQEQELFD 230
Query: 586 ALAKL 600
+ ++
Sbjct: 231 EMREI 235
>UniRef50_P61011 Cluster: Signal recognition particle 54 kDa
protein; n=37; Eukaryota|Rep: Signal recognition
particle 54 kDa protein - Homo sapiens (Human)
Length = 504
Score = 47.6 bits (108), Expect = 3e-04
Identities = 28/124 (22%), Positives = 55/124 (44%)
Frame = +1
Query: 229 EGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAVEQLRTHTRXXXX 408
+G+ V+ F G+ G GK+T +K+ ++ + DTFRAGA +QL+ +
Sbjct: 98 KGKQNVIMFVGLQGSGKTTTCSKLAYYYQRKGWKTCLICADTFRAGAFDQLKQNA----- 152
Query: 409 XXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRA 588
+ Y D IA E + + +++++DT+GR + + L
Sbjct: 153 --------TKARIPFYGSYTEMDPVIIASEGVEKFKNENFEIIIVDTSGRHKQEDSLFEE 204
Query: 589 LAKL 600
+ ++
Sbjct: 205 MLQV 208
>UniRef50_A2WZA2 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 377
Score = 47.2 bits (107), Expect = 4e-04
Identities = 23/49 (46%), Positives = 32/49 (65%)
Frame = +1
Query: 235 RPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAVEQL 381
+P V+ GVNG GK+T+L K+ + + VL+AA DTFRA A +QL
Sbjct: 197 KPAVIMIVGVNGGGKTTSLGKLAYRFKNEGVKVLMAAGDTFRAAARDQL 245
>UniRef50_A2F1E7 Cluster: SRP54-type protein, putative; n=1;
Trichomonas vaginalis G3|Rep: SRP54-type protein,
putative - Trichomonas vaginalis G3
Length = 482
Score = 47.2 bits (107), Expect = 4e-04
Identities = 37/159 (23%), Positives = 68/159 (42%)
Frame = +1
Query: 124 SVAKTVKATLTESLVRILSPKRRVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKIC 303
S+ K ++ LV ++ PK VD + +G+P V F G+ G GK+T K+
Sbjct: 69 SIKKHIERETLRLLVDLVDPK--VDAYKPT-----KGKPNVYMFVGLQGSGKTTTCTKLG 121
Query: 304 FWLIENDLSVLIAACDTFRAGAVEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAA 483
+ + V + DTFRAGA EQL + + + Y D
Sbjct: 122 LYYKKRGFKVGLVGADTFRAGAREQLMQNAQSVG-------------LPYYVDLVNIDPI 168
Query: 484 GIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKL 600
+A+ + + D++++DT+G+ L + + ++
Sbjct: 169 SVAISGVEKFKRERYDMIIVDTSGKHAQENALFQEMQEM 207
>UniRef50_P66845 Cluster: Signal recognition particle protein; n=74;
Bacteria|Rep: Signal recognition particle protein -
Mycobacterium bovis
Length = 525
Score = 47.2 bits (107), Expect = 4e-04
Identities = 49/195 (25%), Positives = 79/195 (40%)
Frame = +1
Query: 16 KLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSPKRRV 195
++R L+ +V+ + + + G + + + A+ V + E L+ IL + R
Sbjct: 33 EIRLALLEADVSLPVVRAFIHRIKERARGAEVSSALNPAQQVVKIVNEELISILGGETR- 91
Query: 196 DILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAVE 375
+ AK P V+ G+ G GK+T K+ L + L+ ACD R AV
Sbjct: 92 ----ELAFAKTP--PTVVMLAGLQGSGKTTLAGKLAARLRGQGHTPLLVACDLQRPAAVN 145
Query: 376 QLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAG 555
QL+ E G G D +A + A DVV++DTAG
Sbjct: 146 QLQVVGERAGVPVFAPHPGASP-----ESGPG-DPVAVAAAGLAEARAKHFDVVIVDTAG 199
Query: 556 RMQDNEPLMRALAKL 600
R+ +E LM A +
Sbjct: 200 RLGIDEELMAQAAAI 214
>UniRef50_Q3V8C7 Cluster: Flagellar biosynthetic protein FlhF,
putative; n=6; Geobacter|Rep: Flagellar biosynthetic
protein FlhF, putative - Geobacter sulfurreducens
Length = 451
Score = 46.8 bits (106), Expect = 6e-04
Identities = 28/63 (44%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Frame = +1
Query: 214 LHAKQEGRPYVMAFCGVNGVGKSTNLAKIC--FWLIENDLSVLIAACDTFRAGAVEQLRT 387
L K+ G P ++A G GVGK+T +AK+ + L E + LI D FR GAVEQL+T
Sbjct: 249 LTVKKNG-PRIIALVGPTGVGKTTTIAKLAAHYALREGHRAALITI-DNFRVGAVEQLKT 306
Query: 388 HTR 396
++R
Sbjct: 307 YSR 309
>UniRef50_A6TRN6 Cluster: GTP-binding signal recognition particle
SRP54, G-domain; n=1; Alkaliphilus metalliredigens
QYMF|Rep: GTP-binding signal recognition particle SRP54,
G-domain - Alkaliphilus metalliredigens QYMF
Length = 391
Score = 46.8 bits (106), Expect = 6e-04
Identities = 38/104 (36%), Positives = 57/104 (54%), Gaps = 7/104 (6%)
Frame = +1
Query: 103 KVLGTFDSVA---KTV---KATLTESLVRILSPKRRVDILRDCLHAKQEGRPYVMAFCGV 264
K+L T++ + KTV +ATL E LV +L I + K+ P ++ F G
Sbjct: 152 KLLETYEEIDITNKTVLNKEATLKEKLVEVLEQY----IFKVSTINKES--PQIIFFVGP 205
Query: 265 NGVGKSTNLAKICFWLIEND-LSVLIAACDTFRAGAVEQLRTHT 393
GVGK+T +AK+ N+ SV + + DT+R AVEQLRT++
Sbjct: 206 TGVGKTTTIAKLAAHHALNEGQSVGLISADTYRIAAVEQLRTYS 249
>UniRef50_A7CS33 Cluster: Signal recognition particle protein; n=1;
Opitutaceae bacterium TAV2|Rep: Signal recognition
particle protein - Opitutaceae bacterium TAV2
Length = 478
Score = 46.4 bits (105), Expect = 8e-04
Identities = 44/186 (23%), Positives = 81/186 (43%), Gaps = 1/186 (0%)
Frame = +1
Query: 46 VAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSPKRRVDILRDCLHAK 225
++AD+ K+ +++ +V+G V K V T + +V+I+ + V +L +
Sbjct: 65 LSADVHFKVVREFVDRVQQQVVG--QEVMKGV--TPGQQIVKIIHDEL-VRLLGEGTTEL 119
Query: 226 QEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLS-VLIAACDTFRAGAVEQLRTHTRXX 402
RP + G++G GK+T+ AK+ L + + + CD +R A++QL +
Sbjct: 120 SAARPLKILMVGLHGSGKTTSTAKLGKLLKKRGYNKPFVVGCDIYRPAAIDQLEILAKQE 179
Query: 403 XXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLM 582
+ Y KD I + A D + DTAGR+Q ++ L+
Sbjct: 180 D-------------LGFYSDRVSKDVPAIGAAGLEAARAAGADAIFFDTAGRLQIDQDLI 226
Query: 583 RALAKL 600
+ KL
Sbjct: 227 EEVKKL 232
>UniRef50_Q18D08 Cluster: Signal recognition particle complex,
GTP-binding subunit; n=2; Clostridium difficile|Rep:
Signal recognition particle complex, GTP-binding subunit
- Clostridium difficile (strain 630)
Length = 338
Score = 46.0 bits (104), Expect = 0.001
Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Frame = +1
Query: 121 DSVAKTVKATLTESLVR-ILSPKRRVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAK 297
+ + ++++ L E I + K V+IL+ + + + +A G GVGK+T +AK
Sbjct: 103 EEIVESIRIDLQEMKFNGIDTSKNLVEILKKKIKIENQVINGKIALVGPPGVGKTTTIAK 162
Query: 298 ICFWLI-ENDLSVLIAACDTFRAGAVEQLRTHT 393
+ L+ E + V + DT+R GAVEQL+ +T
Sbjct: 163 LAAKLVFEENKKVGVITIDTYRIGAVEQLKIYT 195
>UniRef50_Q6CRH5 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome D of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=8; Fungi/Metazoa group|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome D of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 530
Score = 46.0 bits (104), Expect = 0.001
Identities = 27/119 (22%), Positives = 54/119 (45%)
Frame = +1
Query: 244 VMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAVEQLRTHTRXXXXXXXXX 423
V+ F G+ G GK+T+ K+ + + V + DTFRAGA +QL+ +
Sbjct: 109 VIMFVGLQGSGKTTSCTKLAVYYSKRGYKVGLVCADTFRAGAFDQLKQNA---------- 158
Query: 424 XXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKL 600
+ Y + +A + + K +++++DT+GR Q + L + + ++
Sbjct: 159 ---IKAKIPFYGSYTEPNPVKVAKDGVDKFKKEKFEIIIVDTSGRHQQEDSLFQEMVEI 214
>UniRef50_O67266 Cluster: Flagellar biosynthesis protein flhF; n=1;
Aquifex aeolicus|Rep: Flagellar biosynthesis protein
flhF - Aquifex aeolicus
Length = 373
Score = 46.0 bits (104), Expect = 0.001
Identities = 34/128 (26%), Positives = 64/128 (50%), Gaps = 1/128 (0%)
Frame = +1
Query: 4 PVLDKLRDHLIGKNVAADIANKLC-DSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILS 180
P + + + L+ KN++ +IA K+ D+ ++ K+ D +++ ++ +++
Sbjct: 107 PRVKRYLEKLVIKNISKNIAEKIIQDACGYDIDNKIYDFKDEPYTSLRESIEKNI----- 161
Query: 181 PKRRVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFR 360
K + +++ P V+A G GVGK+T LAK+ +N V I + D FR
Sbjct: 162 -KLNEEFIQN--------PPKVVALVGPTGVGKTTTLAKLAHLFKKNKKKVGIISLDCFR 212
Query: 361 AGAVEQLR 384
GA EQL+
Sbjct: 213 VGAFEQLK 220
>UniRef50_Q97H67 Cluster: Flagellar GTP-binding protein, FlhF; n=2;
Clostridium|Rep: Flagellar GTP-binding protein, FlhF -
Clostridium acetobutylicum
Length = 389
Score = 45.6 bits (103), Expect = 0.001
Identities = 26/51 (50%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Frame = +1
Query: 244 VMAFCGVNGVGKSTNLAKIC--FWLIENDLSVLIAACDTFRAGAVEQLRTH 390
++ F G GVGK+T +AK+ F LIE LI DT+R GAVEQLRT+
Sbjct: 195 IITFVGPTGVGKTTTIAKLAGKFSLIEKKKVGLITV-DTYRIGAVEQLRTY 244
>UniRef50_Q2LT05 Cluster: Flagellar biosynthesis protein; n=1;
Syntrophus aciditrophicus SB|Rep: Flagellar biosynthesis
protein - Syntrophus aciditrophicus (strain SB)
Length = 390
Score = 45.6 bits (103), Expect = 0.001
Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Frame = +1
Query: 217 HAKQEGRPYVMAFCGVNGVGKSTNLAKI-CFWLIENDLSVLIAACDTFRAGAVEQLRTHT 393
H+++E R V F G GVGK+T LAK+ + + +V + DT+R AVEQL+T+
Sbjct: 190 HSEKEKR--VKVFIGPTGVGKTTTLAKLSAYHALSKKKTVGLITTDTYRIAAVEQLKTYA 247
Query: 394 R 396
R
Sbjct: 248 R 248
>UniRef50_Q1EWK0 Cluster: GTP-binding signal recognition particle
SRP54, G-domain; n=1; Clostridium oremlandii OhILAs|Rep:
GTP-binding signal recognition particle SRP54, G-domain
- Clostridium oremlandii OhILAs
Length = 409
Score = 45.6 bits (103), Expect = 0.001
Identities = 38/139 (27%), Positives = 67/139 (48%), Gaps = 1/139 (0%)
Frame = +1
Query: 193 VDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICF-WLIENDLSVLIAACDTFRAGA 369
+ ++ + ++ K + + V+ F G GVGK+T +AKI + +E L V + + DT+R A
Sbjct: 201 LQLVPESINNKADFKSKVVFFVGSTGVGKTTTIAKIAANYSLEKGLKVGLISADTYRIAA 260
Query: 370 VEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDT 549
V QL+ ++ + E Y + A++ + DV+LIDT
Sbjct: 261 VAQLKIYS--------------DILNIPLEVIYSPEEIHGAIKRLE-----NRDVILIDT 301
Query: 550 AGRMQDNEPLMRALAKLIR 606
AGR N + L+KL++
Sbjct: 302 AGRSHKNNEHVEELSKLLK 320
>UniRef50_Q0EZI9 Cluster: Signal recognition particle GTPase; n=1;
Mariprofundus ferrooxydans PV-1|Rep: Signal recognition
particle GTPase - Mariprofundus ferrooxydans PV-1
Length = 451
Score = 45.6 bits (103), Expect = 0.001
Identities = 33/121 (27%), Positives = 53/121 (43%)
Frame = +1
Query: 238 PYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAVEQLRTHTRXXXXXXX 417
P V+ CG+ G GK+T K+ L V + + D R A EQL+
Sbjct: 99 PSVVLLCGLQGAGKTTTAGKLAKLLASQGKKVALTSVDATRPAAREQLQV---------- 148
Query: 418 XXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAK 597
+ Y +G G AA +A A+ A + V+++DTAGR ++ LM + +
Sbjct: 149 ----LASQVDVPYIEGAGATAAAMAASAVNEAGRSGYHVLILDTAGRQVVDDALMEEIRE 204
Query: 598 L 600
+
Sbjct: 205 V 205
>UniRef50_A0LC37 Cluster: GTP-binding signal recognition particle
SRP54, G-domain; n=1; Magnetococcus sp. MC-1|Rep:
GTP-binding signal recognition particle SRP54, G-domain
- Magnetococcus sp. (strain MC-1)
Length = 452
Score = 45.6 bits (103), Expect = 0.001
Identities = 27/57 (47%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +1
Query: 229 EGRPYVMAFCGVNGVGKSTNLAKICFWLIEN-DLSVLIAACDTFRAGAVEQLRTHTR 396
EG V+ G GVGK+T LAKI L+ N SV + DTFR GAV QL T+ +
Sbjct: 247 EGTARVIVLVGPTGVGKTTTLAKIAADLLLNRRRSVGMITLDTFRVGAVAQLETYAK 303
>UniRef50_Q83MV0 Cluster: Signal recognition particle protein; n=2;
Tropheryma whipplei|Rep: Signal recognition particle
protein - Tropheryma whipplei (strain Twist) (Whipple's
bacillus)
Length = 448
Score = 45.2 bits (102), Expect = 0.002
Identities = 32/123 (26%), Positives = 55/123 (44%)
Frame = +1
Query: 238 PYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAVEQLRTHTRXXXXXXX 417
P ++ G+ G GK++ K+ WL+E + + ACD R A QL+
Sbjct: 102 PTIIMLVGLQGSGKTSFAGKLAKWLMERGHTAALGACDLQRPAAASQLQA---------- 151
Query: 418 XXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAK 597
V + + G DA ++ A + + V++IDTAGRM + +M L++
Sbjct: 152 -VAEQAGASVLIPKSGNALDA---VKTVVKTAREKQFSVLIIDTAGRMNADSDMMDQLSE 207
Query: 598 LIR 606
+ R
Sbjct: 208 IDR 210
>UniRef50_A7D784 Cluster: GTP-binding signal recognition particle
SRP54, G-domain; n=1; Halorubrum lacusprofundi ATCC
49239|Rep: GTP-binding signal recognition particle
SRP54, G-domain - Halorubrum lacusprofundi ATCC 49239
Length = 484
Score = 45.2 bits (102), Expect = 0.002
Identities = 36/138 (26%), Positives = 60/138 (43%)
Frame = +1
Query: 193 VDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAV 372
V+++ D E + ++A G+ G GK+T+ AK+ +W + L + DTFR GA
Sbjct: 104 VELVGDSTELPLENQTILLA--GLQGSGKTTSAAKMAWWFSKKGLRPAVIQTDTFRPGAY 161
Query: 373 EQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTA 552
+Q + V Y D IA E + +D DV ++DTA
Sbjct: 162 DQAKQMCERAE-------------VDFYGDPDNDDPVAIAREGLEATAD--ADVHIVDTA 206
Query: 553 GRMQDNEPLMRALAKLIR 606
GR + L+ + ++ R
Sbjct: 207 GRHALEDDLIAEIEEIER 224
>UniRef50_Q7RB08 Cluster: Signal recognition particle protein SRP54;
n=9; Aconoidasida|Rep: Signal recognition particle
protein SRP54 - Plasmodium yoelii yoelii
Length = 500
Score = 44.8 bits (101), Expect = 0.002
Identities = 33/156 (21%), Positives = 65/156 (41%)
Frame = +1
Query: 133 KTVKATLTESLVRILSPKRRVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWL 312
+ V+ + E L+++L K+ + ++G V+ F G+ G GK+T K +
Sbjct: 73 RLVQKYVVEELIKLLEGKKES-------YVPKKGERNVILFVGLQGSGKTTTCTKYAHYY 125
Query: 313 IENDLSVLIAACDTFRAGAVEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIA 492
+ + DTFRAGA +QL+ + + Y D IA
Sbjct: 126 QKKGFKTALICADTFRAGAFDQLKQNA-------------AKVKIPFYGSYSEVDPVKIA 172
Query: 493 MEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKL 600
+ + K D++++D++GR + L + ++
Sbjct: 173 TDGVNTFLKDKYDLIIVDSSGRHKQENDLFEEMKQV 208
>UniRef50_A2E0A3 Cluster: SRP54-type protein, putative; n=2;
Trichomonas vaginalis G3|Rep: SRP54-type protein,
putative - Trichomonas vaginalis G3
Length = 494
Score = 44.8 bits (101), Expect = 0.002
Identities = 45/191 (23%), Positives = 80/191 (41%), Gaps = 3/191 (1%)
Frame = +1
Query: 40 KNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSPKRRVDILRDCLH 219
K + D + +L DS+ K L S+ + ++ + LV+++ P +
Sbjct: 45 KEIVFDFSRRLKDSINFKEIPPGL----SIRRVIEKAVFNELVKLIDPGIPA-------Y 93
Query: 220 AKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAVEQLRTHTRX 399
Q+ + G+ G GK+T + K+ + + + A DTFRAGA EQL + +
Sbjct: 94 KPQKKMLNIFMMVGLQGAGKTTTVTKLANFYKRRNWRTGVIAADTFRAGAREQLMQNAQ- 152
Query: 400 XXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPL 579
+ + +D A++ I K ++V+IDT+GR E L
Sbjct: 153 ------------TARIPYFVDFTEQDPVQAALKGIEKFRKDKYEIVIIDTSGRHMQEEAL 200
Query: 580 ---MRALAKLI 603
M+ALA +
Sbjct: 201 FAEMKALAAAV 211
>UniRef50_Q8EQW2 Cluster: Flagella-associated protein; n=1;
Oceanobacillus iheyensis|Rep: Flagella-associated
protein - Oceanobacillus iheyensis
Length = 372
Score = 44.4 bits (100), Expect = 0.003
Identities = 38/114 (33%), Positives = 57/114 (50%), Gaps = 2/114 (1%)
Frame = +1
Query: 244 VMAFCGVNGVGKSTNLAKICFWL-IENDLSVLIAACDTFRAGAVEQLRTHTRXXXXXXXX 420
++ F G GVGK+T +AKI L +E V DT+R AV+QL+T+ +
Sbjct: 179 IIQFVGPTGVGKTTTIAKIAAKLYLEEKKKVAFITLDTYRIAAVDQLKTYAKILHIP--- 235
Query: 421 XXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGR-MQDNEPL 579
E Y K+ A+E +++S DV+L+DTAGR +DN+ L
Sbjct: 236 -----------VEVAYSKEDYRKAVE--KFSS---FDVILVDTAGRNYRDNQYL 273
>UniRef50_A4XIZ5 Cluster: GTP-binding signal recognition particle
SRP54, G-domain; n=1; Caldicellulosiruptor
saccharolyticus DSM 8903|Rep: GTP-binding signal
recognition particle SRP54, G-domain -
Caldicellulosiruptor saccharolyticus (strain ATCC 43494
/ DSM 8903)
Length = 370
Score = 44.4 bits (100), Expect = 0.003
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +1
Query: 235 RPYVMAFCGVNGVGKSTNLAKICFWLI-ENDLSVLIAACDTFRAGAVEQLRTH 390
+P V+ F G GVGK+T +AKI L+ E V DT+R AVEQL+T+
Sbjct: 174 QPQVVFFVGPTGVGKTTTIAKIAAKLMFEEGKKVGFITADTYRIAAVEQLKTY 226
>UniRef50_Q1FN29 Cluster: GTP-binding signal recognition particle
SRP54, G-domain; n=1; Clostridium phytofermentans
ISDg|Rep: GTP-binding signal recognition particle SRP54,
G-domain - Clostridium phytofermentans ISDg
Length = 404
Score = 44.0 bits (99), Expect = 0.004
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Frame = +1
Query: 232 GRPYVMAFCGVNGVGKSTNLAKICF-WLIENDLSVLIAACDTFRAGAVEQLRTH 390
G+ + F G GVGK+T +AKI + +E + + DT+R AVEQL+T+
Sbjct: 206 GKTKFIYFIGPTGVGKTTTIAKIASSYKVEKQAKIALMTSDTYRIAAVEQLKTY 259
>UniRef50_Q010M2 Cluster: Signal recognition particle 54kDa subunit;
n=2; Ostreococcus|Rep: Signal recognition particle 54kDa
subunit - Ostreococcus tauri
Length = 559
Score = 44.0 bits (99), Expect = 0.004
Identities = 29/130 (22%), Positives = 53/130 (40%), Gaps = 3/130 (2%)
Frame = +1
Query: 220 AKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAVE--QLRTHT 393
A ++G+ V+ F G+ G GK+T K + + DTFRAGA +
Sbjct: 138 APKKGKRNVVMFVGLQGAGKTTTCTKFAHYYARKGFKAALVCADTFRAGAFDXXXXXXXV 197
Query: 394 RXXXXXXXXXXXXXXXMVTLYEKGYGKD-AAGIAMEAIRYASDTKTDVVLIDTAGRMQDN 570
R + + + + A IA + + K D++++DT+GR +
Sbjct: 198 RPGPFGPVEPKRDQRPKIPVLRLVHPRAMPAKIARGWVARFEEEKMDLIIVDTSGRHRQE 257
Query: 571 EPLMRALAKL 600
E L + ++
Sbjct: 258 EALFEEMREI 267
>UniRef50_P75054 Cluster: Signal recognition particle protein; n=7;
Mycoplasmataceae|Rep: Signal recognition particle
protein - Mycoplasma pneumoniae
Length = 450
Score = 44.0 bits (99), Expect = 0.004
Identities = 43/200 (21%), Positives = 81/200 (40%), Gaps = 2/200 (1%)
Frame = +1
Query: 7 VLDKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILS-P 183
VL ++R L+ +V + ++ + G+ + + K + + + L+ ILS P
Sbjct: 31 VLKEIRIALLDADVNLLVVKNFIKAIREQTVGQTVEPGQDLQKWLLKVIKQELINILSQP 90
Query: 184 KRRVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIEN-DLSVLIAACDTFR 360
+ + RP + G+ G GK+T K+ WL + ++ A D +R
Sbjct: 91 NQEIT----------SKRPLKVMVVGLQGSGKTTTCGKLAVWLKKQFQQKAMLVALDIYR 140
Query: 361 AGAVEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVL 540
A++QL T + KG + EA++ ++ ++
Sbjct: 141 PAAIDQLATLAEQTES-------------VFFAKG-TQAPDQTTKEAVKTFKESGCQAII 186
Query: 541 IDTAGRMQDNEPLMRALAKL 600
DTAGR+Q N+ LM L +
Sbjct: 187 CDTAGRLQTNQELMDELVAI 206
>UniRef50_A3ER43 Cluster: Signal recognition particle GTPase; n=2;
Bacteria|Rep: Signal recognition particle GTPase -
Leptospirillum sp. Group II UBA
Length = 444
Score = 43.6 bits (98), Expect = 0.005
Identities = 47/197 (23%), Positives = 87/197 (44%)
Frame = +1
Query: 10 LDKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSPKR 189
L ++R L+ +V D+ + + +L+G + + +TV + + +V +L ++
Sbjct: 31 LREIRVALLEADVNLDVVKSFTEQLRTRLKGAEVKEGLTPPQTVLKEVFDEVVHLLGDQK 90
Query: 190 RVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGA 369
L+ L +K P V+ G+ G GK+T AK+ + ++ VL+ A D R A
Sbjct: 91 AN--LQ--LSSKP---PTVIMLMGLQGSGKTTTAAKLAYHFRQSGRRVLLVASDLARLAA 143
Query: 370 VEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDT 549
VEQL+ ++ K K G+ +VV++DT
Sbjct: 144 VEQLKVLGEQINVPVVAPDEGLSNPRDMFPKVRKKWIEGM------------HEVVILDT 191
Query: 550 AGRMQDNEPLMRALAKL 600
AGR+ ++ LM+ L+ L
Sbjct: 192 AGRLSIDQNLMKELSDL 208
>UniRef50_A1AUL7 Cluster: GTP-binding signal recognition particle
SRP54, G-domain; n=1; Pelobacter propionicus DSM
2379|Rep: GTP-binding signal recognition particle SRP54,
G-domain - Pelobacter propionicus (strain DSM 2379)
Length = 446
Score = 43.2 bits (97), Expect = 0.007
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +1
Query: 226 QEGRPYVMAFCGVNGVGKSTNLAKIC-FWLIENDLSVLIAACDTFRAGAVEQLRTHTR 396
++ P ++A G GVGK+T AK+ V + D FR GA+EQL+T++R
Sbjct: 246 RKNAPRIIALVGPTGVGKTTTTAKLAAMHAFNRGNKVALITMDIFRVGAIEQLKTYSR 303
>UniRef50_Q57565 Cluster: Signal recognition 54 kDa protein; n=13;
Archaea|Rep: Signal recognition 54 kDa protein -
Methanococcus jannaschii
Length = 451
Score = 43.2 bits (97), Expect = 0.007
Identities = 31/119 (26%), Positives = 54/119 (45%)
Frame = +1
Query: 244 VMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAVEQLRTHTRXXXXXXXXX 423
V+ G+ G GK+T AK+ ++ + L + A DT+R A EQL+
Sbjct: 102 VILLVGIQGSGKTTTAAKLARYIQKRGLKPALIAADTYRPAAYEQLKQLAEKIHVPIYGD 161
Query: 424 XXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKL 600
V + ++G ME + K DV++IDTAGR ++ + L+ + ++
Sbjct: 162 ETRTKSPVDIVKEG---------MEKFK-----KADVLIIDTAGRHKEEKGLLEEMKQI 206
>UniRef50_Q8RA09 Cluster: Flagellar GTP-binding protein; n=3;
Thermoanaerobacter|Rep: Flagellar GTP-binding protein -
Thermoanaerobacter tengcongensis
Length = 341
Score = 42.7 bits (96), Expect = 0.009
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +1
Query: 184 KRRVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIEND-LSVLIAACDTFR 360
K+R+ R + F G GVGK+T +AKI LI N+ V++ D FR
Sbjct: 130 KKRIKAFLGAPQPLDSERSKKVLFIGPTGVGKTTTVAKIASHLILNEGKKVMLVTADVFR 189
Query: 361 AGAVEQLRTH 390
AV+QL+++
Sbjct: 190 IAAVDQLKSY 199
>UniRef50_A6C932 Cluster: GTP-binding signal recognition particle
SRP54, G-domain; n=1; Planctomyces maris DSM 8797|Rep:
GTP-binding signal recognition particle SRP54, G-domain
- Planctomyces maris DSM 8797
Length = 446
Score = 42.7 bits (96), Expect = 0.009
Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Frame = +1
Query: 232 GRPYVMAFCGVNGVGKSTNLAKICF-WLIENDLSVLIAACDTFRAGAVEQLRTH 390
G V+A G GVGK+T +AK+ + + +++ + + DT+R AVEQLRT+
Sbjct: 248 GHRKVVALVGPTGVGKTTTIAKLAANFRLRDNIKMGLVTVDTYRIAAVEQLRTY 301
>UniRef50_A2STI3 Cluster: GTP-binding signal recognition particle
SRP54, G-domain; n=2; Methanomicrobiales|Rep:
GTP-binding signal recognition particle SRP54, G-domain
- Methanocorpusculum labreanum (strain ATCC 43576 / DSM
4855 / Z)
Length = 446
Score = 42.7 bits (96), Expect = 0.009
Identities = 32/108 (29%), Positives = 44/108 (40%)
Frame = +1
Query: 235 RPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAVEQLRTHTRXXXXXX 414
+P + G+ G GK+T K+C + L V D FR GA QL T +
Sbjct: 96 KPQKILMAGLQGSGKTTTTGKLCRYFQRKGLKVGAIGADNFRPGAYAQLETLCKKIN--- 152
Query: 415 XXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGR 558
V Y KDA I + + D DV+++DTAGR
Sbjct: 153 ----------VPSYGDPKEKDAVKIVKDGLAALKD--VDVIIVDTAGR 188
>UniRef50_Q8Y953 Cluster: Lmo0681 protein; n=13; Listeria|Rep:
Lmo0681 protein - Listeria monocytogenes
Length = 407
Score = 42.3 bits (95), Expect = 0.012
Identities = 19/47 (40%), Positives = 31/47 (65%)
Frame = +1
Query: 244 VMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAVEQLR 384
+++ G GVGK+T L K+ + L++ + +V DTFR+GAVEQ +
Sbjct: 208 IISLIGQTGVGKTTTLVKLGWQLLKQNRTVGFITTDTFRSGAVEQFQ 254
>UniRef50_Q2RKD0 Cluster: GTP-binding signal recognition particle
SRP54, G-domain; n=1; Moorella thermoacetica ATCC
39073|Rep: GTP-binding signal recognition particle
SRP54, G-domain - Moorella thermoacetica (strain ATCC
39073)
Length = 392
Score = 42.3 bits (95), Expect = 0.012
Identities = 23/50 (46%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Frame = +1
Query: 244 VMAFCGVNGVGKSTNLAKICF-WLIENDLSVLIAACDTFRAGAVEQLRTH 390
V AF G GVGK+T LAK+ + + V + DT+R GAV+QLRT+
Sbjct: 191 VQAFVGPTGVGKTTTLAKVAARHSLYLEQKVGLITLDTYRIGAVDQLRTY 240
>UniRef50_Q2ADZ9 Cluster: GTP-binding signal recognition particle
SRP54, G-domain; n=1; Halothermothrix orenii H 168|Rep:
GTP-binding signal recognition particle SRP54, G-domain
- Halothermothrix orenii H 168
Length = 356
Score = 42.3 bits (95), Expect = 0.012
Identities = 19/51 (37%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Frame = +1
Query: 244 VMAFCGVNGVGKSTNLAKICF-WLIENDLSVLIAACDTFRAGAVEQLRTHT 393
V+ F G GVGK+T +AK+ + ++ ++ V + DT+R AV+QL+T++
Sbjct: 162 VVLFAGPTGVGKTTTIAKLAARFALDKEVKVGLITADTYRIAAVQQLQTYS 212
>UniRef50_Q0AA01 Cluster: GTP-binding signal recognition particle
SRP54, G-domain; n=1; Alkalilimnicola ehrlichei
MLHE-1|Rep: GTP-binding signal recognition particle
SRP54, G-domain - Alkalilimnicola ehrlichei (strain
MLHE-1)
Length = 466
Score = 42.3 bits (95), Expect = 0.012
Identities = 41/126 (32%), Positives = 56/126 (44%), Gaps = 2/126 (1%)
Frame = +1
Query: 244 VMAFCGVNGVGKSTNLAKIC--FWLIENDLSVLIAACDTFRAGAVEQLRTHTRXXXXXXX 417
VMA G GVGK+T +AK+ F L V + + DTFR GA +QLR
Sbjct: 250 VMALVGPTGVGKTTTVAKLAARFALKHGRDQVALVSTDTFRIGAQDQLRNFA-------- 301
Query: 418 XXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAK 597
V +Y G++ AG+ +E + D K +VL+DTAG Q + L
Sbjct: 302 -----SILQVPVYNAASGEELAGV-LENL----DDKR-LVLVDTAGMSQRDVRLAEQFTA 350
Query: 598 LIRGQR 615
L R
Sbjct: 351 LRESSR 356
>UniRef50_A0Q041 Cluster: Flagellar biosynthesis protein flhF; n=6;
Clostridium|Rep: Flagellar biosynthesis protein flhF -
Clostridium novyi (strain NT)
Length = 411
Score = 42.3 bits (95), Expect = 0.012
Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Frame = +1
Query: 124 SVAKTVKATLTESLVRILSPKRRVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKIC 303
S+ + ++ + E+ I ++ + + D + + V+A G GVGK+T +AK+
Sbjct: 177 SIIRKIEKIVDENTKDIEDKEKVKEAICDIVPVSHDDIKGVVALVGPTGVGKTTTIAKLA 236
Query: 304 --FWLIENDLSVLIAACDTFRAGAVEQLRTH 390
LIE LI DT+R GA+EQL T+
Sbjct: 237 GRLALIEKKKVGLITV-DTYRIGAIEQLSTY 266
>UniRef50_Q2BJ99 Cluster: Flagellar biosynthetic protein FlhF,
putative; n=1; Neptuniibacter caesariensis|Rep:
Flagellar biosynthetic protein FlhF, putative -
Neptuniibacter caesariensis
Length = 474
Score = 41.9 bits (94), Expect = 0.016
Identities = 33/127 (25%), Positives = 59/127 (46%), Gaps = 5/127 (3%)
Frame = +1
Query: 31 LIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSPKRRVDILRD 210
L+ + V + +A ++ + ++LG + +A + + +L + K + L D
Sbjct: 188 LLNQQVLSQVATPEVVKTPLQKKFELLGVSERLATHLLTGIENNLAPDKAWKNALGRLSD 247
Query: 211 CLHAKQEG---RPYVMAFCGVNGVGKSTNLAKIC--FWLIENDLSVLIAACDTFRAGAVE 375
+ + E R ++AF G GVGK+T + K+ L S+ + DT+R A E
Sbjct: 248 AIPVQGEDYIERGGMLAFVGPTGVGKTTTIGKLAARHVLKYGSSSLALVTTDTYRIAAHE 307
Query: 376 QLRTHTR 396
QLRT R
Sbjct: 308 QLRTFGR 314
>UniRef50_Q18ZC2 Cluster: GTP-binding signal recognition particle
SRP54, G-domain; n=2; Desulfitobacterium hafniense|Rep:
GTP-binding signal recognition particle SRP54, G-domain
- Desulfitobacterium hafniense (strain DCB-2)
Length = 412
Score = 41.9 bits (94), Expect = 0.016
Identities = 22/53 (41%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Frame = +1
Query: 235 RPYVMAFCGVNGVGKSTNLAKIC--FWLIENDLSVLIAACDTFRAGAVEQLRT 387
+P ++A G GVGK+T + K+ F +++ LI A DT+R AVEQL+T
Sbjct: 215 KPRIVALVGPTGVGKTTTIGKLAAGFSIVDKRRVALITA-DTYRVAAVEQLKT 266
>UniRef50_Q01PP6 Cluster: GTP-binding signal recognition particle
SRP54, G-domain; n=1; Solibacter usitatus Ellin6076|Rep:
GTP-binding signal recognition particle SRP54, G-domain
- Solibacter usitatus (strain Ellin6076)
Length = 389
Score = 41.9 bits (94), Expect = 0.016
Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 1/115 (0%)
Frame = +1
Query: 49 AADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSPKRRVDILRDCLHAKQ 228
AAD++ +L V ++ G V +T + + R L+ + D +
Sbjct: 125 AADVSAELAREVVQAAGNRLNGQRAPVNRTPQRIDGAAFERALAEEFSSRFTVDATLGRG 184
Query: 229 EGRPYVMAFCGVNGVGKSTNLAKICFWL-IENDLSVLIAACDTFRAGAVEQLRTH 390
P++ A G G GK+T L K+ + VL+ + DT+R A EQLR++
Sbjct: 185 PAEPHIAALVGPPGSGKTTTLVKLAIHFGLAARRPVLLLSMDTYRVAAAEQLRSY 239
>UniRef50_A6BZ37 Cluster: Signal recognition particle protein; n=1;
Planctomyces maris DSM 8797|Rep: Signal recognition
particle protein - Planctomyces maris DSM 8797
Length = 492
Score = 41.9 bits (94), Expect = 0.016
Identities = 32/122 (26%), Positives = 51/122 (41%), Gaps = 1/122 (0%)
Frame = +1
Query: 244 VMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAVEQLRTHTRXXXXXXXXX 423
V+ CG+ G GK+T K+ L E ++ A D R A+EQL+
Sbjct: 102 VIMMCGLQGSGKTTTCGKLARLLKEQGRKPMLVAADLQRPAAIEQLKV------------ 149
Query: 424 XXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDT-KTDVVLIDTAGRMQDNEPLMRALAKL 600
+ E G +A + + A D V++DTAGR+ + LM+ L ++
Sbjct: 150 IAGQVDVPVHAEAPDGNNAVKVCQNGLNQAKKLGNVDTVILDTAGRLHVDADLMKELEQI 209
Query: 601 IR 606
R
Sbjct: 210 ER 211
>UniRef50_Q3ADC7 Cluster: Flagellar biosynthesis protein FlhF; n=1;
Carboxydothermus hydrogenoformans Z-2901|Rep: Flagellar
biosynthesis protein FlhF - Carboxydothermus
hydrogenoformans (strain Z-2901 / DSM 6008)
Length = 350
Score = 41.5 bits (93), Expect = 0.021
Identities = 23/48 (47%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +1
Query: 250 AFCGVNGVGKSTNLAKICFWL-IENDLSVLIAACDTFRAGAVEQLRTH 390
A G GVGK+T LAKI L I + + DTFR GAVEQL+ +
Sbjct: 160 ALIGPTGVGKTTTLAKIAGRLAIHEEKPIRFITLDTFRVGAVEQLKIY 207
>UniRef50_A1HN19 Cluster: GTP-binding signal recognition particle
SRP54, G-domain; n=1; Thermosinus carboxydivorans
Nor1|Rep: GTP-binding signal recognition particle SRP54,
G-domain - Thermosinus carboxydivorans Nor1
Length = 363
Score = 41.5 bits (93), Expect = 0.021
Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Frame = +1
Query: 244 VMAFCGVNGVGKSTNLAKICF-WLIENDLSVLIAACDTFRAGAVEQLRTH 390
V+A G GVGK+T +AK+ + + + V + DT+R AVEQL+T+
Sbjct: 173 VVALIGPTGVGKTTTIAKLAANFALRDGYKVALITADTYRIAAVEQLKTY 222
>UniRef50_Q21IQ3 Cluster: GTP-binding signal recognition particle
SRP54, G-domain; n=1; Saccharophagus degradans 2-40|Rep:
GTP-binding signal recognition particle SRP54, G-domain
- Saccharophagus degradans (strain 2-40 / ATCC 43961 /
DSM 17024)
Length = 527
Score = 41.1 bits (92), Expect = 0.028
Identities = 23/50 (46%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
Frame = +1
Query: 244 VMAFCGVNGVGKSTNLAKICF-WLIENDLS-VLIAACDTFRAGAVEQLRT 387
V AF G GVGK+T +AK+ +++EN V I DT+R GA +QLR+
Sbjct: 319 VFAFVGPTGVGKTTTIAKLAARFVLENGPGKVAIITTDTYRVGAHDQLRS 368
>UniRef50_A6F8T5 Cluster: Flagellar biosynthesis protein; n=1;
Moritella sp. PE36|Rep: Flagellar biosynthesis protein -
Moritella sp. PE36
Length = 488
Score = 40.7 bits (91), Expect = 0.037
Identities = 37/133 (27%), Positives = 65/133 (48%), Gaps = 2/133 (1%)
Frame = +1
Query: 4 PVLDKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSP 183
P+ L HL+ ++A++L +VA + +S ++A LT+++ +++P
Sbjct: 219 PIRAMLIKHLVKIGFTEEVADQLASNVAENC------SIESAWDQIQALLTDNV--LIAP 270
Query: 184 KRRVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKIC--FWLIENDLSVLIAACDTF 357
DIL + +A G GVGK+T +AK+ F ++ +V + DT+
Sbjct: 271 D---DIL---------SKGGAVALVGPTGVGKTTTIAKLAAKFAMLHGSDNVALITTDTY 318
Query: 358 RAGAVEQLRTHTR 396
R GA EQL T+ R
Sbjct: 319 RIGAHEQLATYGR 331
>UniRef50_Q9HMN5 Cluster: Signal recognition 54 kDa protein; n=14;
Euryarchaeota|Rep: Signal recognition 54 kDa protein -
Halobacterium salinarium (Halobacterium halobium)
Length = 460
Score = 40.7 bits (91), Expect = 0.037
Identities = 32/114 (28%), Positives = 48/114 (42%)
Frame = +1
Query: 259 GVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAVEQLRTHTRXXXXXXXXXXXXXX 438
G+ G GK+T AK+ +W + L I DTFR GA EQ
Sbjct: 104 GLQGSGKTTTAAKMAWWFSKKGLRPAIVQTDTFRPGAYEQ-------------AAEMADR 150
Query: 439 XMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKL 600
V Y + D IA + + +D DV ++DTAGR + L+ + ++
Sbjct: 151 AEVDFYGEPDSDDPVQIARDGLAATAD--ADVHIVDTAGRHALEDDLIAEIEEI 202
>UniRef50_Q9X009 Cluster: Flagellar biosynthesis protein FlhF; n=4;
Thermotogaceae|Rep: Flagellar biosynthesis protein FlhF
- Thermotoga maritima
Length = 378
Score = 40.3 bits (90), Expect = 0.049
Identities = 37/117 (31%), Positives = 51/117 (43%), Gaps = 1/117 (0%)
Frame = +1
Query: 253 FCGVNGVGKSTNLAKICF-WLIENDLSVLIAACDTFRAGAVEQLRTHTRXXXXXXXXXXX 429
F G GVGK+T+LAK+ + I+ V I DT+R A EQL+ +
Sbjct: 177 FVGTTGVGKTTSLAKLAARFKIDEKKRVAILTLDTYRIAAAEQLKIYA------------ 224
Query: 430 XXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKL 600
M + Y A M A++ D+VL+DTAGR N+ M L L
Sbjct: 225 --DIMDIPMKIAYTPKEAEYEMMALK-----DYDIVLVDTAGRSHQNDLQMSELRAL 274
>UniRef50_A4M5W2 Cluster: GTP-binding signal recognition particle
SRP54, G-domain; n=1; Petrotoga mobilis SJ95|Rep:
GTP-binding signal recognition particle SRP54, G-domain
- Petrotoga mobilis SJ95
Length = 438
Score = 40.3 bits (90), Expect = 0.049
Identities = 37/113 (32%), Positives = 52/113 (46%)
Frame = +1
Query: 253 FCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAVEQLRTHTRXXXXXXXXXXXX 432
F G GVGK+T LAKI L + + + + DT+R A +QL+T+
Sbjct: 249 FIGPTGVGKTTTLAKIAANLKKLNKKIALITIDTYRIAATDQLKTYADILG--------- 299
Query: 433 XXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRAL 591
V+L+ Y IA+E++ DV+LIDTAGR N M L
Sbjct: 300 ----VSLH-ICYTPSDLKIALESL-----LNFDVILIDTAGRSHKNNLQMGEL 342
>UniRef50_Q97ZE7 Cluster: Signal recognition 54 kDa protein; n=8;
Thermoprotei|Rep: Signal recognition 54 kDa protein -
Sulfolobus solfataricus
Length = 447
Score = 40.3 bits (90), Expect = 0.049
Identities = 26/107 (24%), Positives = 47/107 (43%)
Frame = +1
Query: 238 PYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAVEQLRTHTRXXXXXXX 417
P+++ GV G GK+T K+ ++ + V + A D +R A +QL
Sbjct: 96 PFIIMLVGVQGSGKTTTAGKLAYFYKKRGYKVGLVAADVYRPAAYDQL------------ 143
Query: 418 XXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGR 558
V +Y + ++ IA + + K D++++DTAGR
Sbjct: 144 -LQLGNQIGVQVYGEPNNQNPIEIAKKGVDIFVKNKMDIIIVDTAGR 189
>UniRef50_UPI00015BD4F8 Cluster: UPI00015BD4F8 related cluster; n=1;
unknown|Rep: UPI00015BD4F8 UniRef100 entry - unknown
Length = 373
Score = 39.9 bits (89), Expect = 0.065
Identities = 16/49 (32%), Positives = 29/49 (59%)
Frame = +1
Query: 244 VMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAVEQLRTH 390
++A G GVGK+T +AK+ + + D++R GAV+QL+++
Sbjct: 182 ILALVGPTGVGKTTTIAKLAYMYKTQGFKTGVITLDSYRTGAVQQLQSY 230
>UniRef50_Q485K6 Cluster: Flagellar biosynthetic protein FlhF; n=1;
Colwellia psychrerythraea 34H|Rep: Flagellar
biosynthetic protein FlhF - Colwellia psychrerythraea
(strain 34H / ATCC BAA-681) (Vibriopsychroerythus)
Length = 513
Score = 39.9 bits (89), Expect = 0.065
Identities = 38/128 (29%), Positives = 57/128 (44%), Gaps = 2/128 (1%)
Frame = +1
Query: 244 VMAFCGVNGVGKSTNLAKIC--FWLIENDLSVLIAACDTFRAGAVEQLRTHTRXXXXXXX 417
V+A G GVGK+T +AK+ F + V + + DTFR EQL T+ +
Sbjct: 298 VVALVGPTGVGKTTTIAKLAAGFSQVHGSDQVALISTDTFRIAGFEQLATYGK------- 350
Query: 418 XXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAK 597
V+L KD+ + + +Y +K ++LIDTAG Q + L L
Sbjct: 351 ----IIGCQVSL-----AKDSQALDILLQQY---SKKKLILIDTAGMGQRDMRLAEQLTA 398
Query: 598 LIRGQRTR 621
L+ R R
Sbjct: 399 LVSNARVR 406
>UniRef50_Q41BW8 Cluster: GTP-binding signal recognition particle
SRP54, G-domain:IMP dehydrogenase/GMP reductase; n=1;
Exiguobacterium sibiricum 255-15|Rep: GTP-binding signal
recognition particle SRP54, G-domain:IMP
dehydrogenase/GMP reductase - Exiguobacterium sibiricum
255-15
Length = 356
Score = 39.9 bits (89), Expect = 0.065
Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Frame = +1
Query: 259 GVNGVGKSTNLAKIC-FWLIENDLSVLIAACDTFRAGAVEQLRTH 390
G GVGK+T LAK+ ++ + V + DT+R AVEQLRT+
Sbjct: 169 GPTGVGKTTTLAKLAAYYRLTKQQKVGLITTDTYRISAVEQLRTY 213
>UniRef50_A6DBP7 Cluster: Flagellar biosynthesis regulator FlhF;
n=1; Caminibacter mediatlanticus TB-2|Rep: Flagellar
biosynthesis regulator FlhF - Caminibacter
mediatlanticus TB-2
Length = 410
Score = 39.9 bits (89), Expect = 0.065
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Frame = +1
Query: 244 VMAFCGVNGVGKSTNLAKICF---WLIENDLSVLIAACDTFRAGAVEQLRTHTR 396
++ F G GVGK+T +AK+ + + V I DT+R GAVEQL T+ +
Sbjct: 213 ILMFVGPTGVGKTTTIAKLAARYAYKLSTRHKVGIITLDTYRIGAVEQLMTYAK 266
>UniRef50_A1WCF3 Cluster: GTP-binding signal recognition particle
SRP54, G-domain; n=6; Comamonadaceae|Rep: GTP-binding
signal recognition particle SRP54, G-domain - Acidovorax
sp. (strain JS42)
Length = 530
Score = 39.9 bits (89), Expect = 0.065
Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = +1
Query: 163 LVRILSPKRRVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWL--IENDLSVL 336
L+ +L R D L +EG + A G GVGK+T AK+ I SV
Sbjct: 285 LMEVLERNLRTDA--QTLPLYEEGG--IFAMVGATGVGKTTTTAKLAALCARIHGPASVG 340
Query: 337 IAACDTFRAGAVEQLRTHTR 396
+ DT+R GA EQLR++ R
Sbjct: 341 LITLDTYRVGAHEQLRSYGR 360
>UniRef50_O52908 Cluster: Flagellar biosynthesis protein flhF; n=15;
Campylobacter|Rep: Flagellar biosynthesis protein flhF -
Campylobacter jejuni
Length = 484
Score = 39.9 bits (89), Expect = 0.065
Identities = 26/66 (39%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Frame = +1
Query: 199 ILRDCLHAKQEG---RPYVMAFCGVNGVGKSTNLAKICFWLIEND--LSVLIAACDTFRA 363
+LR+ L + E + +M G GVGK+T LAK+ F D I DT+R
Sbjct: 266 LLRNILPCRVESDIKKQKIMMLVGPTGVGKTTTLAKLAFRYAYGDKRYKTGIITLDTYRI 325
Query: 364 GAVEQL 381
GAVEQL
Sbjct: 326 GAVEQL 331
>UniRef50_Q01960 Cluster: Flagellar biosynthesis protein flhF; n=3;
Bacillus|Rep: Flagellar biosynthesis protein flhF -
Bacillus subtilis
Length = 366
Score = 39.5 bits (88), Expect = 0.086
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +1
Query: 241 YVMAFCGVNGVGKSTNLAKIC-FWLIENDLSVLIAACDTFRAGAVEQLRTH 390
Y++ F G G GK+T LAK+ ++E + DT+R AVEQL+T+
Sbjct: 177 YIVLF-GSTGAGKTTTLAKLAAISMLEKHKKIAFITTDTYRIAAVEQLKTY 226
>UniRef50_Q5WFS1 Cluster: Flagellar biosynthesis protein FlhF; n=1;
Bacillus clausii KSM-K16|Rep: Flagellar biosynthesis
protein FlhF - Bacillus clausii (strain KSM-K16)
Length = 325
Score = 39.1 bits (87), Expect = 0.11
Identities = 36/125 (28%), Positives = 53/125 (42%), Gaps = 1/125 (0%)
Frame = +1
Query: 235 RPYVMAFCGVNGVGKSTNLAKICFW-LIENDLSVLIAACDTFRAGAVEQLRTHTRXXXXX 411
R + G GVGK+T +AK+ + E + +V DT+R AVEQL+T+
Sbjct: 132 RQQTLIVAGPTGVGKTTTIAKLAAKAMFEENKTVSFITFDTYRIAAVEQLKTYAH----- 186
Query: 412 XXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRAL 591
+ T Y + E I D+VL+DTAGR +E + L
Sbjct: 187 -----ILDCPIYTAYNES----------ELIDLCGRQTADLVLVDTAGRNYLHEQMPVEL 231
Query: 592 AKLIR 606
+ IR
Sbjct: 232 VEYIR 236
>UniRef50_Q2B7H4 Cluster: Flagellar biosynthesis regulator FlhF;
n=1; Bacillus sp. NRRL B-14911|Rep: Flagellar
biosynthesis regulator FlhF - Bacillus sp. NRRL B-14911
Length = 381
Score = 39.1 bits (87), Expect = 0.11
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 9/72 (12%)
Frame = +1
Query: 202 LRDCLHAKQEGRPY--------VMAFCGVNGVGKSTNLAKICF-WLIENDLSVLIAACDT 354
LR+ L AK E Y ++ F G GVGK+T LAKI +I+ DT
Sbjct: 166 LRELLTAKLETAQYGGIAFDHKIINFVGPTGVGKTTTLAKIAAECVIKQKKKTAFITTDT 225
Query: 355 FRAGAVEQLRTH 390
+R A++QL+T+
Sbjct: 226 YRIAAIDQLKTY 237
>UniRef50_A6CQB0 Cluster: Flagellar biosynthesis regulator FlhF;
n=1; Bacillus sp. SG-1|Rep: Flagellar biosynthesis
regulator FlhF - Bacillus sp. SG-1
Length = 384
Score = 39.1 bits (87), Expect = 0.11
Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Frame = +1
Query: 259 GVNGVGKSTNLAKICFW-LIENDLSVLIAACDTFRAGAVEQLRTHTR 396
G GVGK+T LAK+ + ++E + DT+R A+EQL+T+ +
Sbjct: 196 GPTGVGKTTTLAKMAYEAVLERRKKIAFITTDTYRIAAIEQLKTYAQ 242
>UniRef50_Q1JZR9 Cluster: GTP-binding signal recognition particle
SRP54, G-domain; n=1; Desulfuromonas acetoxidans DSM
684|Rep: GTP-binding signal recognition particle SRP54,
G-domain - Desulfuromonas acetoxidans DSM 684
Length = 437
Score = 38.7 bits (86), Expect = 0.15
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +1
Query: 226 QEGRPYVMAFCGVNGVGKSTNLAKICF-WLIENDLSVLIAACDTFRAGAVEQLRTH 390
Q G +A G GVGK+T +AK+ L+ V + DT+R AVEQL+ +
Sbjct: 238 QPGESKRIALIGPTGVGKTTTIAKLAASHLLAGGKRVALVTIDTYRIAAVEQLKVY 293
>UniRef50_Q7WJE2 Cluster: Flagellar biosynthesis protein; n=2;
Bordetella|Rep: Flagellar biosynthesis protein -
Bordetella bronchiseptica (Alcaligenes bronchisepticus)
Length = 790
Score = 38.3 bits (85), Expect = 0.20
Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = +1
Query: 244 VMAFCGVNGVGKSTNLAKICFWLI--ENDLSVLIAACDTFRAGAVEQLRTHTR 396
V A G GVGK+T LAK+ + E V + D FR GA+EQL+ + R
Sbjct: 195 VFALVGPTGVGKTTTLAKLAARCVAREGREQVAMLTTDNFRIGALEQLQIYGR 247
>UniRef50_Q6AJS5 Cluster: Related to flagellar biosynthesis protein;
n=1; Desulfotalea psychrophila|Rep: Related to flagellar
biosynthesis protein - Desulfotalea psychrophila
Length = 430
Score = 38.3 bits (85), Expect = 0.20
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +1
Query: 223 KQEGRPYVMAFCGVNGVGKSTNLAKI-CFWLIENDLSVLIAACDTFRAGAVEQLRTH 390
K+ +A G GVGK+T LAK+ L S+ + DT+R AVEQL+ +
Sbjct: 232 KEINEQQCIALVGPTGVGKTTTLAKLAAAKLSSGSASIAMITIDTYRIAAVEQLKVY 288
>UniRef50_Q3V873 Cluster: Flagellar biosynthetic protein FlhF; n=2;
Idiomarina|Rep: Flagellar biosynthetic protein FlhF -
Idiomarina loihiensis
Length = 444
Score = 38.3 bits (85), Expect = 0.20
Identities = 38/127 (29%), Positives = 57/127 (44%), Gaps = 2/127 (1%)
Frame = +1
Query: 247 MAFCGVNGVGKSTNLAKICFWLIENDLS--VLIAACDTFRAGAVEQLRTHTRXXXXXXXX 420
+A G GVGK+T +AK+ + + V + DTFR GA EQL+T+ R
Sbjct: 230 VALVGPTGVGKTTTIAKLAARYAQRHGADKVALITTDTFRIGASEQLQTYGRIIGCP--- 286
Query: 421 XXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKL 600
+ A+ A+R S ++LIDTAG Q ++ L L++L
Sbjct: 287 -----------VKVAKNAQELADALLALRQKS-----LILIDTAGMGQRDKRLNEQLSQL 330
Query: 601 IRGQRTR 621
I+ R R
Sbjct: 331 IQNSRLR 337
>UniRef50_Q4IZ83 Cluster: GTP-binding signal recognition particle
(SRP54) G-domain; n=1; Azotobacter vinelandii AvOP|Rep:
GTP-binding signal recognition particle (SRP54) G-domain
- Azotobacter vinelandii AvOP
Length = 758
Score = 38.3 bits (85), Expect = 0.20
Identities = 22/53 (41%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Frame = +1
Query: 244 VMAFCGVNGVGKSTNLAKICF-WLIENDLS-VLIAACDTFRAGAVEQLRTHTR 396
V+A G GVGK+T AK+ +++ + S V + + D+FR GA EQLR + R
Sbjct: 192 VIALVGPTGVGKTTTAAKLAARYVMRHGASQVALISTDSFRIGAHEQLRIYAR 244
>UniRef50_A4BUF1 Cluster: GTP-binding signal recognition particle
SRP54; n=1; Nitrococcus mobilis Nb-231|Rep: GTP-binding
signal recognition particle SRP54 - Nitrococcus mobilis
Nb-231
Length = 439
Score = 38.3 bits (85), Expect = 0.20
Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +1
Query: 244 VMAFCGVNGVGKSTNLAKIC--FWLIENDLSVLIAACDTFRAGAVEQLRTHTR 396
V+A G GVGK+T +AK+ F L V + D FR G EQLR+ R
Sbjct: 222 VIAIVGPTGVGKTTTVAKLAARFALRHGRRHVALVTTDNFRIGGQEQLRSFAR 274
>UniRef50_Q4UKH4 Cluster: Signal recognition particle protein; n=11;
Rickettsia|Rep: Signal recognition particle protein -
Rickettsia felis (Rickettsia azadi)
Length = 449
Score = 38.3 bits (85), Expect = 0.20
Identities = 48/193 (24%), Positives = 76/193 (39%), Gaps = 1/193 (0%)
Frame = +1
Query: 19 LRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSPKRRVD 198
+R L+ +VA + V K G+ + S + + + E ++ +L+
Sbjct: 34 IRVALLESDVALPVIKDFIAEVKQKALGQEVIKSVSPGQMIIKIIHEEMINLLASSESET 93
Query: 199 ILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAVEQ 378
L L++K P G+ G GK+T +K+ L + VL+ + DT+R A EQ
Sbjct: 94 KLN--LNSKP---PVNFLMVGLQGSGKTTASSKLALRLKNQNKKVLLVSLDTYRPAAQEQ 148
Query: 379 LRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGR 558
L + G+ I AI A + VV+ DTAGR
Sbjct: 149 L-------------AILANSVQINSLPIVQGEKPLDIVKRAIAEAKISAYGVVIYDTAGR 195
Query: 559 MQ-DNEPLMRALA 594
Q D E + ALA
Sbjct: 196 TQIDKEMMEEALA 208
>UniRef50_Q9KA53 Cluster: Flagella-associated protein; n=1; Bacillus
halodurans|Rep: Flagella-associated protein - Bacillus
halodurans
Length = 375
Score = 37.9 bits (84), Expect = 0.26
Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Frame = +1
Query: 259 GVNGVGKSTNLAKICFW-LIENDLSVLIAACDTFRAGAVEQLRTHTR 396
G GVGK+T +AK+ +++ V + DT+R AVEQL+T+ +
Sbjct: 186 GPTGVGKTTTIAKLAAHSVLKKKKKVALITTDTYRIAAVEQLKTYAK 232
>UniRef50_A6M182 Cluster: GTP-binding signal recognition particle
SRP54, G-domain; n=1; Clostridium beijerinckii NCIMB
8052|Rep: GTP-binding signal recognition particle SRP54,
G-domain - Clostridium beijerinckii NCIMB 8052
Length = 446
Score = 37.9 bits (84), Expect = 0.26
Identities = 22/46 (47%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Frame = +1
Query: 259 GVNGVGKSTNLAKIC--FWLIENDLSVLIAACDTFRAGAVEQLRTH 390
G GVGK+T +AK+ LIE LI DT+R GA+EQL+T+
Sbjct: 257 GPTGVGKTTTIAKLAGRLALIEKKKVGLITV-DTYRIGAIEQLKTY 301
>UniRef50_Q8TUY9 Cluster: Signal recognition 54 kDa protein; n=4;
Euryarchaeota|Rep: Signal recognition 54 kDa protein -
Methanopyrus kandleri
Length = 447
Score = 37.9 bits (84), Expect = 0.26
Identities = 33/119 (27%), Positives = 56/119 (47%)
Frame = +1
Query: 244 VMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAVEQLRTHTRXXXXXXXXX 423
V+ G+ G+GK+T AK+ +L V + D +R A EQLR
Sbjct: 103 VIMLVGLYGMGKTTTAAKLARYLQRKGYRVGLVGADPYRPAAGEQLRQLAEEVD------ 156
Query: 424 XXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKL 600
V ++ + DA +A++ + D + DVV++DTAGR + +E L+ L ++
Sbjct: 157 -------VPVHVEDV-DDAVEMAVKGVEALKD-ECDVVIVDTAGRDRLSEDLIDELREM 206
>UniRef50_O52256 Cluster: Flagellar biosynthesis protein flhF; n=21;
Pseudomonas|Rep: Flagellar biosynthesis protein flhF -
Pseudomonas putida
Length = 437
Score = 37.9 bits (84), Expect = 0.26
Identities = 38/125 (30%), Positives = 61/125 (48%), Gaps = 2/125 (1%)
Frame = +1
Query: 244 VMAFCGVNGVGKSTNLAKIC--FWLIENDLSVLIAACDTFRAGAVEQLRTHTRXXXXXXX 417
V+A G G+GK+T LAK+ + L ++ + + D+FR GA EQL+T R
Sbjct: 220 VIAMVGPAGMGKTTTLAKLAARYVLKYGAQNLALVSMDSFRIGAQEQLKTLGRILNVP-- 277
Query: 418 XXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAK 597
VT + G + A+E + + VVLIDTAG +Q ++P +R +
Sbjct: 278 ---------VTYVDPG---QSLAAALEPL-----LRKRVVLIDTAG-LQASDPALRMQLE 319
Query: 598 LIRGQ 612
+ G+
Sbjct: 320 TLAGR 324
>UniRef50_Q3V7T7 Cluster: Flagellar biosynthetic protein; n=1;
Geobacillus kaustophilus|Rep: Flagellar biosynthetic
protein - Geobacillus kaustophilus
Length = 409
Score = 37.5 bits (83), Expect = 0.35
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +1
Query: 196 DILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKIC-FWLIENDLSVLIAACDTFRAGAV 372
D+L K + M G GVGK+T LAK+ ++E V DT+R A+
Sbjct: 200 DLLSTLPFVKTAEQKKYMILLGPTGVGKTTTLAKMAGRAVLEQGKKVGFITADTYRIAAI 259
Query: 373 EQLRTH 390
+QL+T+
Sbjct: 260 DQLKTY 265
>UniRef50_Q2IQP9 Cluster: GTP-binding signal recognition particle
SRP54, G-domain; n=1; Anaeromyxobacter dehalogenans
2CP-C|Rep: GTP-binding signal recognition particle
SRP54, G-domain - Anaeromyxobacter dehalogenans (strain
2CP-C)
Length = 378
Score = 37.5 bits (83), Expect = 0.35
Identities = 21/47 (44%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +1
Query: 244 VMAFCGVNGVGKSTNLAKICF-WLIENDLSVLIAACDTFRAGAVEQL 381
V+A G GVGK+T LAK+ L+E V DT+R G EQL
Sbjct: 187 VIAAVGPTGVGKTTTLAKVAARALLETRKRVAFVTVDTYRLGGAEQL 233
>UniRef50_A6W0V3 Cluster: GTP-binding signal recognition particle
SRP54 G-domain; n=2; Marinomonas|Rep: GTP-binding signal
recognition particle SRP54 G-domain - Marinomonas sp.
MWYL1
Length = 427
Score = 37.5 bits (83), Expect = 0.35
Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +1
Query: 247 MAFCGVNGVGKSTNLAKICFW--LIENDLSVLIAACDTFRAGAVEQLRTHTR 396
+AF G GVGK+T + KI L V++ DT+R A EQLRT R
Sbjct: 222 IAFMGPTGVGKTTTIGKIAAQHVLKHGSEGVVLITTDTYRIAAHEQLRTFGR 273
>UniRef50_A3GPY9 Cluster: Signal recognition particle-docking
protein FtsY; n=1; Vibrio cholerae NCTC 8457|Rep: Signal
recognition particle-docking protein FtsY - Vibrio
cholerae NCTC 8457
Length = 266
Score = 37.5 bits (83), Expect = 0.35
Identities = 24/98 (24%), Positives = 48/98 (48%)
Frame = +1
Query: 7 VLDKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSPK 186
+ ++L + L+ +V D +K+ ++ + + L +++ +K + E L ++ P
Sbjct: 114 LFEELEEQLLIADVGMDTTSKIIANLTARASRQQLRDGEALYGLLKEEMAEILSQVEQP- 172
Query: 187 RRVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKI 300
L E +PYV+ GVNGVGK+T + K+
Sbjct: 173 ---------LVIDTEKKPYVILMVGVNGVGKTTTIGKL 201
>UniRef50_A6Q939 Cluster: Flagellar biosynthesis protein FlhF; n=1;
Sulfurovum sp. NBC37-1|Rep: Flagellar biosynthesis
protein FlhF - Sulfurovum sp. (strain NBC37-1)
Length = 362
Score = 37.1 bits (82), Expect = 0.46
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Frame = +1
Query: 208 DCLHAKQEGRPY--VMAFCGVNGVGKSTNLAKICF---WLIENDLSVLIAACDTFRAGAV 372
+ L K+E + +M G GVGK+T +AK+ +L++ V + D+++ GA+
Sbjct: 150 ETLKVKEEDLDHSKIMMLVGPTGVGKTTTIAKLAARYAYLLDRPYKVALINLDSYKVGAI 209
Query: 373 EQL 381
EQL
Sbjct: 210 EQL 212
>UniRef50_A2UBG2 Cluster: GTP-binding signal recognition particle
SRP54, G-domain; n=1; Bacillus coagulans 36D1|Rep:
GTP-binding signal recognition particle SRP54, G-domain
- Bacillus coagulans 36D1
Length = 375
Score = 37.1 bits (82), Expect = 0.46
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +1
Query: 259 GVNGVGKSTNLAKICFW-LIENDLSVLIAACDTFRAGAVEQLRTH 390
G GVGK+T LAK+ ++E + DT+R A+EQL+T+
Sbjct: 187 GPTGVGKTTTLAKMAAQAVLEKKEKIAFITTDTYRIAAIEQLKTY 231
>UniRef50_Q3A5E7 Cluster: Flagellar GTP-binding protein; n=1;
Pelobacter carbinolicus DSM 2380|Rep: Flagellar
GTP-binding protein - Pelobacter carbinolicus (strain
DSM 2380 / Gra Bd 1)
Length = 419
Score = 36.3 bits (80), Expect = 0.81
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +1
Query: 247 MAFCGVNGVGKSTNLAKICFWLIENDLS-VLIAACDTFRAGAVEQLRTH 390
+A G GVGK+T +AK+ + N V + DT+R AVEQL+ +
Sbjct: 225 IALVGPTGVGKTTTIAKMAAKQLLNGTGRVALVTIDTYRIAAVEQLKVY 273
>UniRef50_O68049 Cluster: Iron(Iii) dicitrate transport ATP-binding
protein; n=1; Rhodobacter capsulatus|Rep: Iron(Iii)
dicitrate transport ATP-binding protein - Rhodobacter
capsulatus (Rhodopseudomonas capsulata)
Length = 255
Score = 36.3 bits (80), Expect = 0.81
Identities = 23/68 (33%), Positives = 32/68 (47%)
Frame = +1
Query: 181 PKRRVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFR 360
PK + D+L D A EG+ +A CG G GK+ L IC + N +V + D +
Sbjct: 11 PKGQPDLLSDISFAVPEGQS--LAICGAKGAGKTALLRLICRQIAPNRGTVRLLGRDLWL 68
Query: 361 AGAVEQLR 384
A E R
Sbjct: 69 MSAPEAAR 76
>UniRef50_A0Y185 Cluster: Flagellar biosynthesis regulator FlhF;
n=2; Alteromonadales|Rep: Flagellar biosynthesis
regulator FlhF - Alteromonadales bacterium TW-7
Length = 491
Score = 36.3 bits (80), Expect = 0.81
Identities = 40/126 (31%), Positives = 56/126 (44%), Gaps = 2/126 (1%)
Frame = +1
Query: 244 VMAFCGVNGVGKSTNLAKICFWLIENDLS--VLIAACDTFRAGAVEQLRTHTRXXXXXXX 417
V A G GVGK+T +AK+ + + V + DT+R GA EQL T+ R
Sbjct: 275 VYALVGPTGVGKTTTVAKLAALGAQKYGADKVALITTDTYRIGAYEQLATYGRIIGCGVK 334
Query: 418 XXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAK 597
KDA +A E + + + + +VLIDTAG Q + L L
Sbjct: 335 QV----------------KDANELA-EVLYHLRNKR--LVLIDTAGMSQRDLRLTEQLNT 375
Query: 598 LIRGQR 615
L+R QR
Sbjct: 376 LMRNQR 381
>UniRef50_Q7S8Y8 Cluster: Putative uncharacterized protein
NCU08827.1; n=4; Pezizomycotina|Rep: Putative
uncharacterized protein NCU08827.1 - Neurospora crassa
Length = 341
Score = 36.3 bits (80), Expect = 0.81
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Frame = +1
Query: 208 DCLHAKQEG-RPYVMAFCGVNGVGKSTNLAKICFWLIEND-LSVLIAACDTFRAGAVEQL 381
+ LHA + RP+++ GV GVGK+T + + L E + L+ L+ + D F EQL
Sbjct: 59 NALHANEANPRPFIIGLNGVQGVGKTTLVKALAETLQEREGLNTLVVSIDDFYLTHEEQL 118
Query: 382 R 384
+
Sbjct: 119 K 119
>UniRef50_Q8TM86 Cluster: Putative uncharacterized protein; n=3;
Methanosarcina|Rep: Putative uncharacterized protein -
Methanosarcina acetivorans
Length = 263
Score = 36.3 bits (80), Expect = 0.81
Identities = 20/49 (40%), Positives = 25/49 (51%)
Frame = +1
Query: 235 RPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAVEQL 381
+ Y +A CG G GKST A + L+EN SVL+ D G QL
Sbjct: 6 KAYKLAICGKGGSGKSTIAALLAKALVENGNSVLVIDTDESNFGLHRQL 54
>UniRef50_Q7VH24 Cluster: Flagellar GTP-binding protein FlhF; n=3;
Helicobacteraceae|Rep: Flagellar GTP-binding protein
FlhF - Helicobacter hepaticus
Length = 483
Score = 35.9 bits (79), Expect = 1.1
Identities = 37/139 (26%), Positives = 65/139 (46%), Gaps = 7/139 (5%)
Frame = +1
Query: 196 DILRDCLHAK----QEGRPYVMAFCGVNGVGKSTNLAKIC--FWLIEND-LSVLIAACDT 354
++LR ++ + Q ++ G GVGK+T LAK+ + L+ N V + DT
Sbjct: 264 EVLRKMIYCRPENLQSNAKKIIMLVGPTGVGKTTTLAKLAARYSLMLNQRYRVGVVTLDT 323
Query: 355 FRAGAVEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDV 534
+R AV+QL + R + T+ E + G A++++++ D
Sbjct: 324 YRLAAVDQLMAYAR----------MMKLSIDTVVE----PEEFGKAIDSLKHC-----DY 364
Query: 535 VLIDTAGRMQDNEPLMRAL 591
+LIDTAG Q + ++AL
Sbjct: 365 ILIDTAGHSQHDRSKLQAL 383
>UniRef50_Q1RN79 Cluster: FlhF; n=1; Azospirillum brasilense|Rep:
FlhF - Azospirillum brasilense
Length = 353
Score = 35.5 bits (78), Expect = 1.4
Identities = 38/115 (33%), Positives = 49/115 (42%)
Frame = +1
Query: 259 GVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAVEQLRTHTRXXXXXXXXXXXXXX 438
G G GK+ +AK+ + SV + DT RAG +EQL TR
Sbjct: 142 GPPGSGKTLIVAKLAAQAVFRKRSVGVITTDTVRAGGMEQLAAFTR----------LMKI 191
Query: 439 XMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLI 603
+ T+ + DA A E R A DVVL+DTAGR N M L L+
Sbjct: 192 KLATVED----PDALAGAFEVSRGA-----DVVLVDTAGRNPYNREDMADLKALL 237
>UniRef50_A3IF09 Cluster: Flagellar biosynthesis regulator FlhF;
n=1; Bacillus sp. B14905|Rep: Flagellar biosynthesis
regulator FlhF - Bacillus sp. B14905
Length = 398
Score = 35.5 bits (78), Expect = 1.4
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +1
Query: 235 RPYVMAFCGVNGVGKSTNLAKICFW-LIENDLSVLIAACDTFRAGAVEQLRTH 390
R Y+ G GVGK+T +AK+ ++E + DT+R A+EQL+T+
Sbjct: 203 RKYINVL-GPTGVGKTTTIAKMAARAVLEKKKKIGFITTDTYRIAAIEQLKTY 254
>UniRef50_A1V7R2 Cluster: Dipeptide transport system permease
protein; n=3; Burkholderia mallei|Rep: Dipeptide
transport system permease protein - Burkholderia mallei
(strain SAVP1)
Length = 241
Score = 35.5 bits (78), Expect = 1.4
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +2
Query: 374 SSCARTRGTSTRCTRPRATTHDTWSRSTR 460
S+C+R R + RC+RPRATT T S+R
Sbjct: 207 SACSRRRPSGARCSRPRATTSTTHGGSSR 235
>UniRef50_Q1ZIV3 Cluster: Flagellar biosynthesis protein; n=1;
Psychromonas sp. CNPT3|Rep: Flagellar biosynthesis
protein - Psychromonas sp. CNPT3
Length = 481
Score = 35.1 bits (77), Expect = 1.9
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +1
Query: 247 MAFCGVNGVGKSTNLAKIC--FWLIENDLSVLIAACDTFRAGAVEQLRTH 390
+A G GVGK+T +AK+ F + V + DT+R GA EQL T+
Sbjct: 273 IALLGPTGVGKTTTIAKLAAQFAMKYGADQVALITTDTYRIGAHEQLATY 322
>UniRef50_A4C6B9 Cluster: Flagellar biosynthesis protein; n=1;
Pseudoalteromonas tunicata D2|Rep: Flagellar
biosynthesis protein - Pseudoalteromonas tunicata D2
Length = 471
Score = 35.1 bits (77), Expect = 1.9
Identities = 23/54 (42%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = +1
Query: 244 VMAFCGVNGVGKSTNLAKICFWLIEN---DLSVLIAACDTFRAGAVEQLRTHTR 396
V A G GVGK+T +AK+ + D LI DT+R GA EQL T+ R
Sbjct: 255 VFALVGPTGVGKTTTVAKLAALGAQKFGADKIALITT-DTYRIGAYEQLATYGR 307
>UniRef50_A1WD43 Cluster: Excinuclease ABC, A subunit; n=8;
Burkholderiales|Rep: Excinuclease ABC, A subunit -
Acidovorax sp. (strain JS42)
Length = 1029
Score = 35.1 bits (77), Expect = 1.9
Identities = 31/95 (32%), Positives = 43/95 (45%), Gaps = 10/95 (10%)
Frame = -1
Query: 402 EVP-RVRAQLLHGAGAERVARRY-------QHRQIVLDQPEADL--RQVRRFTDAVHPAE 253
E+P RVR +LHG+G E +A Y + + IV P + RR+ D
Sbjct: 369 ELPERVREVILHGSGEEEIAFSYLLDSGPNKGKPIVKKHPFEGILPNMARRYRDTDSAVV 428
Query: 252 RHDVGPALLLGVQTVPQDVHATLRRQYPHEGLGEG 148
R D+ A Q P+ A LRR+ H +GEG
Sbjct: 429 REDL--ARYRSAQPCPECHGARLRREARHVKVGEG 461
>UniRef50_Q74ZB3 Cluster: AGR286Cp; n=1; Eremothecium gossypii|Rep:
AGR286Cp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 359
Score = 35.1 bits (77), Expect = 1.9
Identities = 18/45 (40%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Frame = +1
Query: 505 RYASDTKTDVVLIDTAGRMQDNEPLMR--ALAKLIRGQRTRHGAL 633
R+A T+ ++ I ++ ++QD+ PL+ LAKLIR Q T+ G L
Sbjct: 40 RFAYGTRDELAAISSSTQLQDSTPLLELAKLAKLIRAQTTKVGIL 84
>UniRef50_UPI000023ECC3 Cluster: predicted protein; n=1; Gibberella
zeae PH-1|Rep: predicted protein - Gibberella zeae PH-1
Length = 1223
Score = 34.7 bits (76), Expect = 2.5
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 9/71 (12%)
Frame = +1
Query: 205 RDCLHAKQE---GRPYVMAFCGVNGVGKSTNLAKICFW-----LIENDLSVLIAACDTFR 360
RD LH + G P + G++G+GK+ L + W +I++ + V +++C+ F
Sbjct: 430 RDVLHIESILLLGAPLPLLIYGLSGIGKTALLGHLSAWWKASGMIDDAILVKLSSCEPFS 489
Query: 361 AG-AVEQLRTH 390
G ++QL++H
Sbjct: 490 KGDTMQQLQSH 500
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 695,124,024
Number of Sequences: 1657284
Number of extensions: 14304082
Number of successful extensions: 55645
Number of sequences better than 10.0: 272
Number of HSP's better than 10.0 without gapping: 52414
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 55535
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 61734884250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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