Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0992
         (750 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    24   1.1  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    23   2.0  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    23   3.4  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    23   3.4  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    22   6.0  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   6.0  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   8.0  

>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = -2

Query: 149 VAFTVLATLSKVPSTFPSSLMATLSQSLLAMSAA 48
           + F +L     +P T  +  +ATL QSL  +++A
Sbjct: 303 IVFDLLQVYGHIPKTQTNIAIATLIQSLAPLNSA 336


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = -2

Query: 149 VAFTVLATLSKVPSTFPSSLMATLSQSLLAMSAA 48
           + F +L    ++P T  +  +AT  QSL  +++A
Sbjct: 268 IIFDLLQVFGQIPGTQTNIAIATFIQSLAPLNSA 301


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +1

Query: 277 KSTNLAKICFWLIEND 324
           KS NLA +  W IE D
Sbjct: 351 KSLNLAGVMIWSIETD 366


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 13/29 (44%), Positives = 14/29 (48%)
 Frame = +1

Query: 277 KSTNLAKICFWLIENDLSVLIAACDTFRA 363
           K  NLA +  W IE D   L A C T  A
Sbjct: 339 KDNNLAGVMIWSIETD--DLHATCGTKNA 365


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +2

Query: 41  RTSPRTSPISSVIVLPS 91
           RTSP+ SP+SS+   P+
Sbjct: 474 RTSPQLSPMSSLPPYPN 490


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +3

Query: 441 HGHALREGIRQRRGRHSNGSNTI 509
           HGH+ R    +R G H N S  +
Sbjct: 537 HGHSFRVVAMERVGSHVNVSEIL 559


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = -1

Query: 447 DHVSCVVARGRVQRVEVPRVRAQLLHGAGAERVARRYQHRQIV 319
           DH   +  + RV  V+VP++      G G  R +RR+    +V
Sbjct: 305 DHRPALAQQRRVAAVQVPQLAGGGRRGPGPAR-SRRHLPAHLV 346


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,321
Number of Sequences: 336
Number of extensions: 2997
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)