Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0992
         (750 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    27   0.47 
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    26   1.4  
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           25   1.9  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    25   2.5  
AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.           24   4.4  
AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.           24   4.4  
AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled ...    24   5.8  

>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 27.5 bits (58), Expect = 0.47
 Identities = 13/25 (52%), Positives = 14/25 (56%)
 Frame = +1

Query: 238 PYVMAFCGVNGVGKSTNLAKICFWL 312
           P   A  G+NG GKS  L  ICF L
Sbjct: 25  PEFNAITGLNGTGKSNILDSICFVL 49


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = +1

Query: 457 EKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDN 570
           E G+G+DA  + ++A R   + K DV+++    R  +N
Sbjct: 21  EPGHGRDAQNLVLQAAR---EEKADVLILSDVLRPPEN 55


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 10/25 (40%), Positives = 15/25 (60%), Gaps = 3/25 (12%)
 Frame = +2

Query: 191 AWTSCGTVCT---PSRRAGPTSWRS 256
           +W +C  +     PSR +GP+SW S
Sbjct: 203 SWAACMELAASADPSRNSGPSSWMS 227


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1201

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 12/39 (30%), Positives = 17/39 (43%)
 Frame = -1

Query: 642  SPTKSTVSGSLTANELGEGPHQRLVVLHSARSVDEHDVG 526
            SP    V        LGE   ++L+V+   R +  H VG
Sbjct: 1129 SPPPRAVGRRAEVRSLGERYRRQLLVVEERRQISGHSVG 1167


>AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 12/36 (33%), Positives = 15/36 (41%)
 Frame = +2

Query: 362 PAPWSSCARTRGTSTRCTRPRATTHDTWSRSTRRDT 469
           P  WS+   T   S +   P  TT   W+ ST   T
Sbjct: 162 PTTWSAPTTTTTWSDQPPPPTTTTTTVWTDSTATTT 197


>AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 12/36 (33%), Positives = 15/36 (41%)
 Frame = +2

Query: 362 PAPWSSCARTRGTSTRCTRPRATTHDTWSRSTRRDT 469
           P  WS+   T   S +   P  TT   W+ ST   T
Sbjct: 162 PTTWSAPTTTTTWSDQPRPPTTTTTTVWTDSTATTT 197


>AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled
           receptor 3 protein.
          Length = 605

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 10/34 (29%), Positives = 20/34 (58%)
 Frame = -2

Query: 149 VAFTVLATLSKVPSTFPSSLMATLSQSLLAMSAA 48
           + F +L    ++P+T  +  +AT  QSL  +++A
Sbjct: 471 IIFDLLQVFGQIPATQTNVAIATFIQSLAPLNSA 504


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 719,446
Number of Sequences: 2352
Number of extensions: 14844
Number of successful extensions: 37
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)