BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brP-0992 (750 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein. 27 0.47 M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 26 1.4 AY578805-1|AAT07310.1| 753|Anopheles gambiae medea protein. 25 1.9 AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 25 2.5 AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein. 24 4.4 AY344829-1|AAR05800.1| 334|Anopheles gambiae ICHIT protein. 24 4.4 AY500851-1|AAS77205.1| 605|Anopheles gambiae G-protein coupled ... 24 5.8 >AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein. Length = 1187 Score = 27.5 bits (58), Expect = 0.47 Identities = 13/25 (52%), Positives = 14/25 (56%) Frame = +1 Query: 238 PYVMAFCGVNGVGKSTNLAKICFWL 312 P A G+NG GKS L ICF L Sbjct: 25 PEFNAITGLNGTGKSNILDSICFVL 49 >M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles gambiae RT2 retroposon. ). Length = 1222 Score = 25.8 bits (54), Expect = 1.4 Identities = 12/38 (31%), Positives = 22/38 (57%) Frame = +1 Query: 457 EKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDN 570 E G+G+DA + ++A R + K DV+++ R +N Sbjct: 21 EPGHGRDAQNLVLQAAR---EEKADVLILSDVLRPPEN 55 >AY578805-1|AAT07310.1| 753|Anopheles gambiae medea protein. Length = 753 Score = 25.4 bits (53), Expect = 1.9 Identities = 10/25 (40%), Positives = 15/25 (60%), Gaps = 3/25 (12%) Frame = +2 Query: 191 AWTSCGTVCT---PSRRAGPTSWRS 256 +W +C + PSR +GP+SW S Sbjct: 203 SWAACMELAASADPSRNSGPSSWMS 227 >AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase protein. Length = 1201 Score = 25.0 bits (52), Expect = 2.5 Identities = 12/39 (30%), Positives = 17/39 (43%) Frame = -1 Query: 642 SPTKSTVSGSLTANELGEGPHQRLVVLHSARSVDEHDVG 526 SP V LGE ++L+V+ R + H VG Sbjct: 1129 SPPPRAVGRRAEVRSLGERYRRQLLVVEERRQISGHSVG 1167 >AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein. Length = 334 Score = 24.2 bits (50), Expect = 4.4 Identities = 12/36 (33%), Positives = 15/36 (41%) Frame = +2 Query: 362 PAPWSSCARTRGTSTRCTRPRATTHDTWSRSTRRDT 469 P WS+ T S + P TT W+ ST T Sbjct: 162 PTTWSAPTTTTTWSDQPPPPTTTTTTVWTDSTATTT 197 >AY344829-1|AAR05800.1| 334|Anopheles gambiae ICHIT protein. Length = 334 Score = 24.2 bits (50), Expect = 4.4 Identities = 12/36 (33%), Positives = 15/36 (41%) Frame = +2 Query: 362 PAPWSSCARTRGTSTRCTRPRATTHDTWSRSTRRDT 469 P WS+ T S + P TT W+ ST T Sbjct: 162 PTTWSAPTTTTTWSDQPRPPTTTTTTVWTDSTATTT 197 >AY500851-1|AAS77205.1| 605|Anopheles gambiae G-protein coupled receptor 3 protein. Length = 605 Score = 23.8 bits (49), Expect = 5.8 Identities = 10/34 (29%), Positives = 20/34 (58%) Frame = -2 Query: 149 VAFTVLATLSKVPSTFPSSLMATLSQSLLAMSAA 48 + F +L ++P+T + +AT QSL +++A Sbjct: 471 IIFDLLQVFGQIPATQTNVAIATFIQSLAPLNSA 504 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 719,446 Number of Sequences: 2352 Number of extensions: 14844 Number of successful extensions: 37 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 37 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 37 length of database: 563,979 effective HSP length: 63 effective length of database: 415,803 effective search space used: 77339358 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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