Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0992
(750 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014298-1556|AAF48002.2| 614|Drosophila melanogaster CG2522-PA... 311 6e-85
AY061329-1|AAL28877.1| 504|Drosophila melanogaster LD25651p pro... 56 7e-08
AY094660-1|AAM11013.1| 569|Drosophila melanogaster AT23778p pro... 42 0.001
AF160891-1|AAD46831.1| 508|Drosophila melanogaster BcDNA.GM0948... 42 0.001
AE014296-936|AAF50806.1| 508|Drosophila melanogaster CG4659-PA ... 42 0.001
U18130-1|AAC46512.1| 1047|Drosophila melanogaster masquerade pro... 31 1.3
AY864367-1|AAX38005.1| 574|Drosophila melanogaster scavenger re... 31 1.7
AY865075-2|AAW79481.1| 630|Drosophila melanogaster SR-CI protein. 29 5.1
AE014297-1242|AAF54590.2| 521|Drosophila melanogaster CG4739-PA... 29 5.1
BT003452-1|AAO39455.1| 223|Drosophila melanogaster RH38596p pro... 29 8.9
AY865064-2|AAW79460.1| 632|Drosophila melanogaster SR-CI protein. 29 8.9
AY069631-1|AAL39776.1| 148|Drosophila melanogaster LD40095p pro... 29 8.9
AY061054-1|AAL28602.1| 201|Drosophila melanogaster LD02291p pro... 29 8.9
AE013599-410|AAF59256.1| 201|Drosophila melanogaster CG1669-PA ... 29 8.9
>AE014298-1556|AAF48002.2| 614|Drosophila melanogaster CG2522-PA
protein.
Length = 614
Score = 311 bits (764), Expect = 6e-85
Identities = 147/202 (72%), Positives = 168/202 (83%)
Frame = +1
Query: 1 RPVLDKLRDHLIGKNVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILS 180
+P L+K+RDHLI KNVA++IA KLCDSVA L+GK +GTFDS+A VK LTESLVRILS
Sbjct: 316 QPALEKMRDHLISKNVASEIAAKLCDSVAASLDGKQMGTFDSIASQVKEALTESLVRILS 375
Query: 181 PKRRVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFR 360
PKRR+DI+RD L +K+ GRPY + FCGVNGVGKSTNLAKICFWLIEND +VLIAACDTFR
Sbjct: 376 PKRRIDIIRDALESKRNGRPYTIIFCGVNGVGKSTNLAKICFWLIENDFNVLIAACDTFR 435
Query: 361 AGAVEQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVL 540
AGAVEQLRTHTR MV LYEKGYGKDAAGIAMEAI++A DT+ DVVL
Sbjct: 436 AGAVEQLRTHTRHLNALHPAAKHDGRNMVQLYEKGYGKDAAGIAMEAIKFAHDTRVDVVL 495
Query: 541 IDTAGRMQDNEPLMRALAKLIR 606
+DTAGRMQDNEPLMR+L+KLI+
Sbjct: 496 VDTAGRMQDNEPLMRSLSKLIK 517
Score = 72.5 bits (170), Expect = 6e-13
Identities = 34/43 (79%), Positives = 36/43 (83%)
Frame = +2
Query: 608 VNEPDTVLFVGXALVXNEAVDQLVKFNQALADYSSXSIPHVID 736
VN PD VLFVG ALV NEAVDQLVKFNQ+LADYSS PH+ID
Sbjct: 518 VNNPDLVLFVGEALVGNEAVDQLVKFNQSLADYSSNENPHIID 560
>AY061329-1|AAL28877.1| 504|Drosophila melanogaster LD25651p
protein.
Length = 504
Score = 55.6 bits (128), Expect = 7e-08
Identities = 36/132 (27%), Positives = 56/132 (42%)
Frame = +3
Query: 114 YLRQCCQDGEGYPHRVPRADTVAEASRGHPAGLSARQAGGQALRHGVLRGERRR*IDEPG 293
++RQ Q GEG H + DT+A+ + H +A + +LR + R + + G
Sbjct: 354 HIRQHRQPGEGGAHGIAGEDTIAQTAHRHHTRCPRIEAQRPPVHDNLLRCQWCRQVHQFG 413
Query: 294 EDLLLVDRERSVGADSGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTHGHALREGIRQ 473
+DLLL DRER +D + T HG +REG+RQ
Sbjct: 414 QDLLLADRERFQRSDRRLRYVPSRCRRAVAHTHTPSERTASGGQARWTQHGAVVREGLRQ 473
Query: 474 RRGRHSNGSNTI 509
RH +G + +
Sbjct: 474 GCRRHCHGGHQV 485
Score = 49.2 bits (112), Expect = 6e-06
Identities = 21/29 (72%), Positives = 26/29 (89%)
Frame = +1
Query: 1 RPVLDKLRDHLIGKNVAADIANKLCDSVA 87
+P L+K+RDHLI KNVA++IA KLCDSVA
Sbjct: 316 QPALEKMRDHLISKNVASEIAAKLCDSVA 344
>AY094660-1|AAM11013.1| 569|Drosophila melanogaster AT23778p
protein.
Length = 569
Score = 41.5 bits (93), Expect = 0.001
Identities = 27/121 (22%), Positives = 52/121 (42%)
Frame = +1
Query: 229 EGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAVEQLRTHTRXXXX 408
+G+ V+ F G+ G GK+T K+ + + + + DTFRAGA +Q++ +
Sbjct: 98 KGKANVVMFVGLQGSGKTTTCTKLAYHYQKRNWKSCLVCADTFRAGAYDQVKQNA----- 152
Query: 409 XXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRA 588
+ Y D IA + + +++++DT+GR + E L
Sbjct: 153 --------TKARIPFYGSYTEIDPVVIAQDGVDMFKREGFEMIIVDTSGRHKQEESLFEE 204
Query: 589 L 591
+
Sbjct: 205 M 205
>AF160891-1|AAD46831.1| 508|Drosophila melanogaster BcDNA.GM09489
protein.
Length = 508
Score = 41.5 bits (93), Expect = 0.001
Identities = 27/121 (22%), Positives = 52/121 (42%)
Frame = +1
Query: 229 EGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAVEQLRTHTRXXXX 408
+G+ V+ F G+ G GK+T K+ + + + + DTFRAGA +Q++ +
Sbjct: 98 KGKANVVMFVGLQGSGKTTTCTKLAYHYQKRNWKSCLVCADTFRAGAYDQVKQNA----- 152
Query: 409 XXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRA 588
+ Y D IA + + +++++DT+GR + E L
Sbjct: 153 --------TKARIPFYGSYTEIDPVVIAQDGVDMFKREGFEMIIVDTSGRHKQEESLFEE 204
Query: 589 L 591
+
Sbjct: 205 M 205
>AE014296-936|AAF50806.1| 508|Drosophila melanogaster CG4659-PA
protein.
Length = 508
Score = 41.5 bits (93), Expect = 0.001
Identities = 27/121 (22%), Positives = 52/121 (42%)
Frame = +1
Query: 229 EGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAVEQLRTHTRXXXX 408
+G+ V+ F G+ G GK+T K+ + + + + DTFRAGA +Q++ +
Sbjct: 98 KGKANVVMFVGLQGSGKTTTCTKLAYHYQKRNWKSCLVCADTFRAGAYDQVKQNA----- 152
Query: 409 XXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRA 588
+ Y D IA + + +++++DT+GR + E L
Sbjct: 153 --------TKARIPFYGSYTEIDPVVIAQDGVDMFKREGFEMIIVDTSGRHKQEESLFEE 204
Query: 589 L 591
+
Sbjct: 205 M 205
>U18130-1|AAC46512.1| 1047|Drosophila melanogaster masquerade
protein.
Length = 1047
Score = 31.5 bits (68), Expect = 1.3
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +2
Query: 368 PWSSCARTRGTSTRCTRPRATTHDTWSRSTRRDTAKTRPA*QWKQYDTRLTLKPTSCSS 544
P ++ + T+ R T ATT T +T T K +P Q K+ T T KPT+ ++
Sbjct: 105 PKTTTTASTTTTQRTTTTVATTSTTKRTTTTSTTPKPKPKPQTKRPATSSTTKPTAATT 163
>AY864367-1|AAX38005.1| 574|Drosophila melanogaster scavenger
receptor protein.
Length = 574
Score = 31.1 bits (67), Expect = 1.7
Identities = 20/67 (29%), Positives = 30/67 (44%)
Frame = +2
Query: 374 SSCARTRGTSTRCTRPRATTHDTWSRSTRRDTAKTRPA*QWKQYDTRLTLKPTSCSSTLR 553
+S R T+T T TT T + +T+R T T T T KPT+ S+T +
Sbjct: 348 TSTTRKSTTTTTTTTTTTTTTSTSTTTTKRPTTTTTTTKATTTKRTTTTKKPTTTSTTPK 407
Query: 554 AECRTTS 574
T++
Sbjct: 408 PTTTTST 414
>AY865075-2|AAW79481.1| 630|Drosophila melanogaster SR-CI protein.
Length = 630
Score = 29.5 bits (63), Expect = 5.1
Identities = 22/62 (35%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Frame = +2
Query: 398 TSTRCTRPRATTHDTWSRST---RRDTAKTRPA*QWKQYDTRLTLKPTSCSSTLRAECRT 568
TST TR TT T S ST +R T T T T KPT+ S+T + T
Sbjct: 403 TSTSTTRKSTTTTSTTSTSTTTTKRPTTTTTTTKATTTKRTTTTKKPTTTSTTPKPTTTT 462
Query: 569 TS 574
++
Sbjct: 463 ST 464
>AE014297-1242|AAF54590.2| 521|Drosophila melanogaster CG4739-PA
protein.
Length = 521
Score = 29.5 bits (63), Expect = 5.1
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +3
Query: 87 HQTRGEGARYLRQCCQD 137
H TR +GA+YLR CQD
Sbjct: 454 HVTRHKGAKYLRSACQD 470
>BT003452-1|AAO39455.1| 223|Drosophila melanogaster RH38596p
protein.
Length = 223
Score = 28.7 bits (61), Expect = 8.9
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 7/52 (13%)
Frame = +1
Query: 256 CGVNGVGKSTNLAKICFWLI--ENDL-----SVLIAACDTFRAGAVEQLRTH 390
CG+ GVGK+ + ++ + + E +L + +A+ DT R GA E LR +
Sbjct: 37 CGMKGVGKTALIEQLVYGHVNPETELHPTIEDIYVASVDTGRGGARETLRIY 88
>AY865064-2|AAW79460.1| 632|Drosophila melanogaster SR-CI protein.
Length = 632
Score = 28.7 bits (61), Expect = 8.9
Identities = 22/84 (26%), Positives = 37/84 (44%)
Frame = +2
Query: 374 SSCARTRGTSTRCTRPRATTHDTWSRSTRRDTAKTRPA*QWKQYDTRLTLKPTSCSSTLR 553
+S + TR ++T T TT T +T+R T T T T KPT+ S+T +
Sbjct: 403 TSTSTTRKSTTTTTTSTTTTSTT---TTKRPTTTTTTTKATTTKRTTTTKKPTTTSTTPK 459
Query: 554 AECRTTSL*CGPSPSSFAVNEPDT 625
T++ + ++F + T
Sbjct: 460 PTTTTSTTPKSTTSTTFTTSTTST 483
>AY069631-1|AAL39776.1| 148|Drosophila melanogaster LD40095p
protein.
Length = 148
Score = 28.7 bits (61), Expect = 8.9
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +2
Query: 185 SVAWTSCGTVCTPSRRAGPTSWRSAG*TASVNRRTWRRSASG 310
+V W SCG VC+ +R P+ S +A+ + W ++G
Sbjct: 85 NVKWLSCGCVCSAARSVVPSGPSSV--SANAHNSHWTSCSNG 124
>AY061054-1|AAL28602.1| 201|Drosophila melanogaster LD02291p
protein.
Length = 201
Score = 28.7 bits (61), Expect = 8.9
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 7/52 (13%)
Frame = +1
Query: 256 CGVNGVGKSTNLAKICFWLI--ENDL-----SVLIAACDTFRAGAVEQLRTH 390
CG+ GVGK+ + ++ + + E +L + +A+ DT R GA E LR +
Sbjct: 15 CGMKGVGKTALIEQLVYGHVNPETELHPTIEDIYVASVDTGRGGARETLRIY 66
>AE013599-410|AAF59256.1| 201|Drosophila melanogaster CG1669-PA
protein.
Length = 201
Score = 28.7 bits (61), Expect = 8.9
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 7/52 (13%)
Frame = +1
Query: 256 CGVNGVGKSTNLAKICFWLI--ENDL-----SVLIAACDTFRAGAVEQLRTH 390
CG+ GVGK+ + ++ + + E +L + +A+ DT R GA E LR +
Sbjct: 15 CGMKGVGKTALIEQLVYGHVNPETELHPTIEDIYVASVDTGRGGARETLRIY 66
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,470,118
Number of Sequences: 53049
Number of extensions: 673604
Number of successful extensions: 2519
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2388
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2517
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3417159966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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