Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0992
         (750 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    25   0.76 
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    23   3.1  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    23   4.0  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   5.3  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    22   5.3  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   5.3  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    22   7.1  

>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 25.0 bits (52), Expect = 0.76
 Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
 Frame = +2

Query: 374 SSCARTRGTSTRCTRPRATTHDTWSR--STRRDTAKTRPA*QWKQYDTRLTLKPTSCSS 544
           S CA T  T T C R      ++  +  S   D  +T    QW + ++RL LKP   S+
Sbjct: 164 SKCALT--TLTDCLRSELAQCESNIKVISISPDLVETDMTAQWLKENSRLALKPKDVSN 220


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 15/48 (31%), Positives = 21/48 (43%)
 Frame = +1

Query: 151 LTESLVRILSPKRRVDILRDCLHAKQEGRPYVMAFCGVNGVGKSTNLA 294
           L    V + +PK  V  L+   H KQ   P+ +A     G G   +LA
Sbjct: 143 LVNRTVPVCAPKLHVFDLKTSNHLKQIEIPHDIAVNATTGKGGLVSLA 190


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -2

Query: 338 ISTDRSFSINQKQIFARFVDLPTPFTP 258
           I+ DR    + + +  RF+D+ TP TP
Sbjct: 804 IAHDRYLPNSLRILLKRFLDITTPPTP 830


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +3

Query: 141 EGYPHRVPR 167
           EGYPH VP+
Sbjct: 448 EGYPHAVPK 456


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +3

Query: 141 EGYPHRVPR 167
           EGYPH VP+
Sbjct: 363 EGYPHAVPK 371


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +3

Query: 141 EGYPHRVPR 167
           EGYPH VP+
Sbjct: 682 EGYPHAVPK 690


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -1

Query: 507 SYCFHCYAGRVFAV 466
           SYC  C +GR F V
Sbjct: 296 SYCKTCISGRAFQV 309


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,125
Number of Sequences: 438
Number of extensions: 3768
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)