Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0989
(750 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003143-4|AAO61427.1| 247|Caenorhabditis elegans Hypothetical ... 90 2e-18
AF003143-3|AAL65781.1| 385|Caenorhabditis elegans Hypothetical ... 90 2e-18
AF003143-2|AAK68267.2| 554|Caenorhabditis elegans Hypothetical ... 90 2e-18
Z49068-9|CAA88860.1| 556|Caenorhabditis elegans Hypothetical pr... 63 2e-10
AL021571-4|CAI79270.1| 610|Caenorhabditis elegans Hypothetical ... 62 3e-10
AL021571-2|CAA16514.2| 592|Caenorhabditis elegans Hypothetical ... 62 3e-10
AL021571-1|CAA16512.2| 651|Caenorhabditis elegans Hypothetical ... 62 3e-10
AC091125-1|AAK27889.2| 313|Caenorhabditis elegans Hypothetical ... 37 0.013
Z93385-2|CAB07637.1| 358|Caenorhabditis elegans Hypothetical pr... 36 0.041
Z92834-10|CAB07393.1| 439|Caenorhabditis elegans Hypothetical p... 33 0.16
Z81134-8|CAB57908.1| 366|Caenorhabditis elegans Hypothetical pr... 32 0.50
AL117202-33|CAB55097.1| 366|Caenorhabditis elegans Hypothetical... 32 0.50
Z69658-2|CAB60997.1| 389|Caenorhabditis elegans Hypothetical pr... 31 0.66
U59213-1|AAB09672.1| 363|Caenorhabditis elegans transmembrane p... 31 0.66
Z47075-7|CAA87384.1| 394|Caenorhabditis elegans Hypothetical pr... 31 0.87
Z36752-8|CAA85330.1| 394|Caenorhabditis elegans Hypothetical pr... 31 0.87
U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly glu... 30 1.5
U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly glu... 30 1.5
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 30 2.0
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 30 2.0
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 30 2.0
Z68000-4|CAA91972.4| 1342|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z50739-4|CAA90605.4| 1342|Caenorhabditis elegans Hypothetical pr... 29 3.5
U13875-6|AAK67213.1| 390|Caenorhabditis elegans Hypothetical pr... 28 8.1
>AF003143-4|AAO61427.1| 247|Caenorhabditis elegans Hypothetical
protein C53H9.2c protein.
Length = 247
Score = 89.8 bits (213), Expect = 2e-18
Identities = 43/80 (53%), Positives = 54/80 (67%), Gaps = 1/80 (1%)
Frame = +2
Query: 224 VGCVGQPNVGKSSLMNSVMGRKVVSVSRTPGHTKHFQTVYLTPQVRLCDCPGLVFPS-KV 400
VG VG PNVGKSS +N + G K VSVS TPG T+HFQT+++ Q+ LCDCPGLV PS
Sbjct: 132 VGMVGYPNVGKSSTINKLAGGKKVSVSATPGKTRHFQTIHIDSQLCLCDCPGLVMPSFSF 191
Query: 401 PRPIQILMGSYPIAQLREPY 460
R L G P+ Q+R+ +
Sbjct: 192 GRSEMFLNGILPVDQMRDHF 211
>AF003143-3|AAL65781.1| 385|Caenorhabditis elegans Hypothetical
protein C53H9.2b protein.
Length = 385
Score = 89.8 bits (213), Expect = 2e-18
Identities = 43/80 (53%), Positives = 54/80 (67%), Gaps = 1/80 (1%)
Frame = +2
Query: 224 VGCVGQPNVGKSSLMNSVMGRKVVSVSRTPGHTKHFQTVYLTPQVRLCDCPGLVFPS-KV 400
VG VG PNVGKSS +N + G K VSVS TPG T+HFQT+++ Q+ LCDCPGLV PS
Sbjct: 132 VGMVGYPNVGKSSTINKLAGGKKVSVSATPGKTRHFQTIHIDSQLCLCDCPGLVMPSFSF 191
Query: 401 PRPIQILMGSYPIAQLREPY 460
R L G P+ Q+R+ +
Sbjct: 192 GRSEMFLNGILPVDQMRDHF 211
>AF003143-2|AAK68267.2| 554|Caenorhabditis elegans Hypothetical
protein C53H9.2a protein.
Length = 554
Score = 89.8 bits (213), Expect = 2e-18
Identities = 43/80 (53%), Positives = 54/80 (67%), Gaps = 1/80 (1%)
Frame = +2
Query: 224 VGCVGQPNVGKSSLMNSVMGRKVVSVSRTPGHTKHFQTVYLTPQVRLCDCPGLVFPS-KV 400
VG VG PNVGKSS +N + G K VSVS TPG T+HFQT+++ Q+ LCDCPGLV PS
Sbjct: 301 VGMVGYPNVGKSSTINKLAGGKKVSVSATPGKTRHFQTIHIDSQLCLCDCPGLVMPSFSF 360
Query: 401 PRPIQILMGSYPIAQLREPY 460
R L G P+ Q+R+ +
Sbjct: 361 GRSEMFLNGILPVDQMRDHF 380
>Z49068-9|CAA88860.1| 556|Caenorhabditis elegans Hypothetical
protein K01C8.9 protein.
Length = 556
Score = 63.3 bits (147), Expect = 2e-10
Identities = 39/111 (35%), Positives = 59/111 (53%), Gaps = 2/111 (1%)
Frame = +2
Query: 161 IIQKADTTYFAHERYRNGTLTVGCVGQPNVGKSSLMNSVMGRKVVSVSRTPGHTKHFQTV 340
I+ K Y ++ + ++ VG VG PNVGKSS++NS+ RK +V PG TK Q V
Sbjct: 242 IVMKILANYCRNKDIKT-SIRVGVVGFPNVGKSSVINSLKRRKACNVGNLPGITKEIQEV 300
Query: 341 YLTPQVRLCDCPGLVFPS-KVPRPIQI-LMGSYPIAQLREPYTAIRYLGER 487
L +RL D PG++ S K PI++ L + + L +P + + R
Sbjct: 301 ELDKNIRLIDSPGVILVSQKDLDPIEVALKNAIRVDNLLDPIAPVHAILRR 351
>AL021571-4|CAI79270.1| 610|Caenorhabditis elegans Hypothetical
protein T19A6.2c protein.
Length = 610
Score = 62.5 bits (145), Expect = 3e-10
Identities = 34/101 (33%), Positives = 58/101 (57%)
Frame = +2
Query: 218 LTVGCVGQPNVGKSSLMNSVMGRKVVSVSRTPGHTKHFQTVYLTPQVRLCDCPGLVFPSK 397
++VG +G PNVGKSSL+N++ +KV + G TK +Q V L ++ L D PG+V+P
Sbjct: 326 ISVGFIGYPNVGKSSLVNTLRKKKVCKTAPIAGETKVWQYVMLMRRIYLIDSPGVVYPQG 385
Query: 398 VPRPIQILMGSYPIAQLREPYTAIRYLGERLNLPQLLRIEH 520
IL G + +++P ++ + +R P+ LR ++
Sbjct: 386 DSETQIILKGVVRVENVKDPENHVQGVLDRCK-PEHLRRQY 425
>AL021571-2|CAA16514.2| 592|Caenorhabditis elegans Hypothetical
protein T19A6.2b protein.
Length = 592
Score = 62.5 bits (145), Expect = 3e-10
Identities = 34/101 (33%), Positives = 58/101 (57%)
Frame = +2
Query: 218 LTVGCVGQPNVGKSSLMNSVMGRKVVSVSRTPGHTKHFQTVYLTPQVRLCDCPGLVFPSK 397
++VG +G PNVGKSSL+N++ +KV + G TK +Q V L ++ L D PG+V+P
Sbjct: 267 ISVGFIGYPNVGKSSLVNTLRKKKVCKTAPIAGETKVWQYVMLMRRIYLIDSPGVVYPQG 326
Query: 398 VPRPIQILMGSYPIAQLREPYTAIRYLGERLNLPQLLRIEH 520
IL G + +++P ++ + +R P+ LR ++
Sbjct: 327 DSETQIILKGVVRVENVKDPENHVQGVLDRCK-PEHLRRQY 366
>AL021571-1|CAA16512.2| 651|Caenorhabditis elegans Hypothetical
protein T19A6.2a protein.
Length = 651
Score = 62.5 bits (145), Expect = 3e-10
Identities = 34/101 (33%), Positives = 58/101 (57%)
Frame = +2
Query: 218 LTVGCVGQPNVGKSSLMNSVMGRKVVSVSRTPGHTKHFQTVYLTPQVRLCDCPGLVFPSK 397
++VG +G PNVGKSSL+N++ +KV + G TK +Q V L ++ L D PG+V+P
Sbjct: 326 ISVGFIGYPNVGKSSLVNTLRKKKVCKTAPIAGETKVWQYVMLMRRIYLIDSPGVVYPQG 385
Query: 398 VPRPIQILMGSYPIAQLREPYTAIRYLGERLNLPQLLRIEH 520
IL G + +++P ++ + +R P+ LR ++
Sbjct: 386 DSETQIILKGVVRVENVKDPENHVQGVLDRCK-PEHLRRQY 425
>AC091125-1|AAK27889.2| 313|Caenorhabditis elegans Hypothetical
protein Y67D2.4 protein.
Length = 313
Score = 37.1 bits (82), Expect = 0.013
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 9/63 (14%)
Frame = +2
Query: 233 VGQPNVGKSSLMNSV------MGRKVVSVSRTPGHTKHFQT---VYLTPQVRLCDCPGLV 385
VG PNVGKSSL+N++ + RK V PG T Q + P V + D PG++
Sbjct: 121 VGIPNVGKSSLINAIRTHTLGIKRKAVEAGARPGVTVRVQNRVRILDKPPVYIIDTPGVL 180
Query: 386 FPS 394
P+
Sbjct: 181 SPN 183
>Z93385-2|CAB07637.1| 358|Caenorhabditis elegans Hypothetical
protein M01E5.2 protein.
Length = 358
Score = 35.5 bits (78), Expect = 0.041
Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Frame = +2
Query: 221 TVGCVGQPNVGKSSLMNSVMGR--KVVSVSRTPGHTKHFQTVYLT--PQVRLCDCPGLVF 388
T G VG PN GKSSL+ ++ KV S T H H V+ Q+ + D PGL+
Sbjct: 190 TAGLVGFPNAGKSSLLRAISRAKPKVASYPFTTLH-PHIGVVFYEDFEQIAVADIPGLIE 248
Query: 389 PSKVPRPIQI 418
S + + + I
Sbjct: 249 DSHLNKGLGI 258
>Z92834-10|CAB07393.1| 439|Caenorhabditis elegans Hypothetical
protein F39B2.7 protein.
Length = 439
Score = 33.5 bits (73), Expect = 0.16
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = +2
Query: 197 ERYRNGTLTVGCVGQPNVGKSSLMNSVMGRKVVSVSRTPGHTK 325
ER + G L + G+PN GKSS++N + V VS PG T+
Sbjct: 205 ERAQRG-LDIVLYGRPNSGKSSILNQLAHDDVAIVSSIPGTTR 246
>Z81134-8|CAB57908.1| 366|Caenorhabditis elegans Hypothetical
protein T28D6.6 protein.
Length = 366
Score = 31.9 bits (69), Expect = 0.50
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +2
Query: 206 RNGTLTVGCVGQPNVGKSSLMNSVMG--RKVVSVSRTPGHTKHFQTVYLTPQVRLCDCPG 379
+ G +G VG P+VGKS+L+ ++ G +V + T T Y +++L D PG
Sbjct: 59 KTGDARIGFVGFPSVGKSTLLCNLAGVFSEVAAYEFTTLTTVPGVIRYKGAKIQLLDLPG 118
Query: 380 LVFPSK 397
++ +K
Sbjct: 119 IIEGAK 124
>AL117202-33|CAB55097.1| 366|Caenorhabditis elegans Hypothetical
protein T28D6.6 protein.
Length = 366
Score = 31.9 bits (69), Expect = 0.50
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +2
Query: 206 RNGTLTVGCVGQPNVGKSSLMNSVMG--RKVVSVSRTPGHTKHFQTVYLTPQVRLCDCPG 379
+ G +G VG P+VGKS+L+ ++ G +V + T T Y +++L D PG
Sbjct: 59 KTGDARIGFVGFPSVGKSTLLCNLAGVFSEVAAYEFTTLTTVPGVIRYKGAKIQLLDLPG 118
Query: 380 LVFPSK 397
++ +K
Sbjct: 119 IIEGAK 124
>Z69658-2|CAB60997.1| 389|Caenorhabditis elegans Hypothetical
protein C36H8.2 protein.
Length = 389
Score = 31.5 bits (68), Expect = 0.66
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Frame = -1
Query: 711 KYSFFQCSRXAAAKGI--FYRPAPIXSRLFAALYVSNLADFAVR*LRFFAQPSQMSLGDH 538
K+ ++ C++ A K I + API S + + S L + + F ++LGD
Sbjct: 297 KWIYYLCNKTKAQKTIKNYLSTAPIKSTISDDQFFSALGEDGL----FIMDQMALNLGDI 352
Query: 537 VSSLSGCSMRNSCGRFSLSPKYL 469
+S SMRN C F S Y+
Sbjct: 353 PASYLTISMRNICQDFIESEDYI 375
>U59213-1|AAB09672.1| 363|Caenorhabditis elegans transmembrane
protein protein.
Length = 363
Score = 31.5 bits (68), Expect = 0.66
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Frame = -1
Query: 711 KYSFFQCSRXAAAKGI--FYRPAPIXSRLFAALYVSNLADFAVR*LRFFAQPSQMSLGDH 538
K+ ++ C++ A K I + API S + + S L + + F ++LGD
Sbjct: 271 KWIYYLCNKTKAQKTIKNYLSTAPIKSTISDDQFFSALGEDGL----FIMDQMALNLGDI 326
Query: 537 VSSLSGCSMRNSCGRFSLSPKYL 469
+S SMRN C F S Y+
Sbjct: 327 PASYLTISMRNICQDFIESEDYI 349
>Z47075-7|CAA87384.1| 394|Caenorhabditis elegans Hypothetical
protein E02H1.2 protein.
Length = 394
Score = 31.1 bits (67), Expect = 0.87
Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Frame = +2
Query: 218 LTVGCVGQPNVGKSSLMNSVMGRKVVSV-SRTPGHTKHFQTVYLTPQVRL--CDCPGLVF 388
L + +G PNVGKS L NS++ + +V S+ T++ + +L D PG V
Sbjct: 34 LQLAVIGAPNVGKSLLTNSLIRCPLSAVSSKMDTTTRNISASICSDSTQLVFVDSPGAVS 93
Query: 389 PSKVPRPIQILMGSYPIAQLREPYTAIR 472
S V + ++ + L++P A++
Sbjct: 94 TSHVRQTMKKTSATSGDRVLQDPERALQ 121
>Z36752-8|CAA85330.1| 394|Caenorhabditis elegans Hypothetical
protein E02H1.2 protein.
Length = 394
Score = 31.1 bits (67), Expect = 0.87
Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Frame = +2
Query: 218 LTVGCVGQPNVGKSSLMNSVMGRKVVSV-SRTPGHTKHFQTVYLTPQVRL--CDCPGLVF 388
L + +G PNVGKS L NS++ + +V S+ T++ + +L D PG V
Sbjct: 34 LQLAVIGAPNVGKSLLTNSLIRCPLSAVSSKMDTTTRNISASICSDSTQLVFVDSPGAVS 93
Query: 389 PSKVPRPIQILMGSYPIAQLREPYTAIR 472
S V + ++ + L++P A++
Sbjct: 94 TSHVRQTMKKTSATSGDRVLQDPERALQ 121
>U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform a
protein.
Length = 1081
Score = 30.3 bits (65), Expect = 1.5
Identities = 23/67 (34%), Positives = 28/67 (41%)
Frame = +1
Query: 349 AAGTSLRLSRAGVSVESA*AHTDPDGFISHSPAQGAVHRHKVLG*EAKPTAAVAHRAPGQ 528
AAGT + + G S E AH G I S Q A H V +P V H +P +
Sbjct: 130 AAGTPPKQAMQGASREQGNAHQPTAGQIPQSSNQPAQQTHNVPR-MPQPLQQVPHPSPVR 188
Query: 529 RRHVVAQ 549
H AQ
Sbjct: 189 GSHPAAQ 195
>U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform b
protein.
Length = 1647
Score = 30.3 bits (65), Expect = 1.5
Identities = 23/67 (34%), Positives = 28/67 (41%)
Frame = +1
Query: 349 AAGTSLRLSRAGVSVESA*AHTDPDGFISHSPAQGAVHRHKVLG*EAKPTAAVAHRAPGQ 528
AAGT + + G S E AH G I S Q A H V +P V H +P +
Sbjct: 130 AAGTPPKQAMQGASREQGNAHQPTAGQIPQSSNQPAQQTHNVPR-MPQPLQQVPHPSPVR 188
Query: 529 RRHVVAQ 549
H AQ
Sbjct: 189 GSHPAAQ 195
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 29.9 bits (64), Expect = 2.0
Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
Frame = -2
Query: 620 CTCPIWQISL*DSCVSSPSHRRCPWATTCR-RCPGARCATAAVGLASHPSTLWRCTAP*A 444
C CP+ + S DSCV + H R +C+ G C T G P + +P
Sbjct: 1590 CACPLVENSFSDSCV-AVDHGRGYVCNSCKPGYTGQYCETCVAGYYGDPQHIGGTCSP-- 1646
Query: 443 GLWDMNPSGSV 411
D +P GS+
Sbjct: 1647 --CDCHPDGSL 1655
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 29.9 bits (64), Expect = 2.0
Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
Frame = -2
Query: 620 CTCPIWQISL*DSCVSSPSHRRCPWATTCR-RCPGARCATAAVGLASHPSTLWRCTAP*A 444
C CP+ + S DSCV + H R +C+ G C T G P + +P
Sbjct: 1590 CACPLVENSFSDSCV-AVDHGRGYVCNSCKPGYTGQYCETCVAGYYGDPQHIGGTCSP-- 1646
Query: 443 GLWDMNPSGSV 411
D +P GS+
Sbjct: 1647 --CDCHPDGSL 1655
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 29.9 bits (64), Expect = 2.0
Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
Frame = -2
Query: 620 CTCPIWQISL*DSCVSSPSHRRCPWATTCR-RCPGARCATAAVGLASHPSTLWRCTAP*A 444
C CP+ + S DSCV + H R +C+ G C T G P + +P
Sbjct: 1590 CACPLVENSFSDSCV-AVDHGRGYVCNSCKPGYTGQYCETCVAGYYGDPQHIGGTCSP-- 1646
Query: 443 GLWDMNPSGSV 411
D +P GS+
Sbjct: 1647 --CDCHPDGSL 1655
>Z68000-4|CAA91972.4| 1342|Caenorhabditis elegans Hypothetical
protein F13D2.1 protein.
Length = 1342
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +2
Query: 206 RNGTLTVGCVGQPNVGKSSLMNSVMGRKVVSVSRTPGHTKHFQT 337
RNGT + NVG+ +L N+ VS+ PG TK+ QT
Sbjct: 410 RNGTKKITATSPDNVGQWALNNAYWWHGRVSL--YPGQTKYIQT 451
>Z50739-4|CAA90605.4| 1342|Caenorhabditis elegans Hypothetical
protein F13D2.1 protein.
Length = 1342
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +2
Query: 206 RNGTLTVGCVGQPNVGKSSLMNSVMGRKVVSVSRTPGHTKHFQT 337
RNGT + NVG+ +L N+ VS+ PG TK+ QT
Sbjct: 410 RNGTKKITATSPDNVGQWALNNAYWWHGRVSL--YPGQTKYIQT 451
>U13875-6|AAK67213.1| 390|Caenorhabditis elegans Hypothetical
protein C26E6.12 protein.
Length = 390
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/27 (37%), Positives = 19/27 (70%)
Frame = +2
Query: 224 VGCVGQPNVGKSSLMNSVMGRKVVSVS 304
+G +G PN GKS+L+ +++ K V ++
Sbjct: 164 IGLLGFPNAGKSTLLKALVPEKSVKIA 190
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,062,598
Number of Sequences: 27780
Number of extensions: 376369
Number of successful extensions: 1111
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1034
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1111
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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