Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0989
(750 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g08410.1 68414.m00930 GTP-binding family protein contains Pfa... 91 7e-19
At2g27200.1 68415.m03269 GTP-binding family protein contains Pfa... 89 3e-18
At3g07050.1 68416.m00837 GTP-binding family protein contains Pfa... 68 6e-12
At1g52980.1 68414.m05995 GTP-binding family protein contains Pfa... 68 6e-12
At4g02790.1 68417.m00379 GTP-binding family protein contains Pfa... 50 2e-06
At1g30960.1 68414.m03791 GTP-binding protein (ERG) identical to ... 46 2e-05
At5g66470.1 68418.m08382 expressed protein 42 3e-04
At5g58370.2 68418.m07309 expressed protein 42 6e-04
At5g58370.1 68418.m07308 expressed protein 42 6e-04
At5g11480.1 68418.m01340 expressed protein 40 0.002
At2g22870.1 68415.m02715 expressed protein 36 0.022
At4g39520.1 68417.m05588 GTP-binding protein, putative similar t... 36 0.038
At3g12080.1 68416.m01504 GTP-binding family protein contains Pfa... 34 0.088
At5g05000.3 68418.m00531 translocate of chloroplast 34 (TOC34) /... 34 0.12
At5g05000.2 68418.m00530 translocate of chloroplast 34 (TOC34) /... 34 0.12
At5g05000.1 68418.m00529 translocate of chloroplast 34 (TOC34) /... 34 0.12
At2g41670.1 68415.m05148 GTP-binding family protein contains Pfa... 34 0.12
At5g39960.1 68418.m04846 GTP-binding family protein contains Pfa... 33 0.27
At1g78010.1 68414.m09091 tRNA modification GTPase, putative simi... 32 0.35
At1g50920.1 68414.m05725 GTP-binding protein-related similar to ... 31 0.82
At1g21430.1 68414.m02680 flavin-containing monooxygenase family ... 31 0.82
At1g10300.1 68414.m01160 GTP-binding protein-related contains si... 31 0.82
At3g17910.1 68416.m02281 surfeit 1 (SURF1) identical to Surfeit ... 31 1.1
At1g56050.1 68414.m06436 GTP-binding protein-related similar to ... 31 1.1
At3g16620.1 68416.m02124 chloroplast outer membrane protein, put... 30 1.9
At1g33970.1 68414.m04212 avirulence-responsive protein, putative... 30 1.9
At1g30580.1 68414.m03741 expressed protein 30 1.9
At4g02510.1 68417.m00343 chloroplast outer membrane protein, put... 29 2.5
At5g45240.1 68418.m05552 disease resistance protein (TIR-NBS-LRR... 29 3.3
At4g09980.1 68417.m01634 methyltransferase MT-A70 family protein... 29 4.4
At5g57960.1 68418.m07252 GTP-binding family protein similar to S... 28 5.8
At5g29070.1 68418.m03617 expressed protein 28 5.8
At1g33930.1 68414.m04205 avirulence-responsive family protein / ... 28 5.8
At4g36150.1 68417.m05145 disease resistance protein (TIR-NBS-LRR... 28 7.6
At2g27520.1 68415.m03329 F-box family protein contains Pfam prof... 28 7.6
>At1g08410.1 68414.m00930 GTP-binding family protein contains Pfam
domain, PF01926: GTPase of unknown function
Length = 589
Score = 91.1 bits (216), Expect = 7e-19
Identities = 44/97 (45%), Positives = 63/97 (64%), Gaps = 1/97 (1%)
Frame = +2
Query: 203 YRNGTLTVGCVGQPNVGKSSLMNSVMGRKVVSVSRTPGHTKHFQTVYLTPQVRLCDCPGL 382
Y+ VG VG PNVGKSS +N+++G+K V+ TPG TKHFQT+ ++ ++ LCDCPGL
Sbjct: 304 YQRDQAVVGFVGYPNVGKSSTINALVGQKRTGVTSTPGKTKHFQTLIISDELMLCDCPGL 363
Query: 383 VFPS-KVPRPIQILMGSYPIAQLREPYTAIRYLGERL 490
VFPS R I G PI ++ E AI+ + +++
Sbjct: 364 VFPSFSSSRYEMIASGVLPIDRMTEHREAIQVVADKV 400
>At2g27200.1 68415.m03269 GTP-binding family protein contains Pfam
domain, PF01926: GTPase of unknown function
Length = 537
Score = 89.0 bits (211), Expect = 3e-18
Identities = 43/90 (47%), Positives = 59/90 (65%), Gaps = 1/90 (1%)
Frame = +2
Query: 218 LTVGCVGQPNVGKSSLMNSVMGRKVVSVSRTPGHTKHFQTVYLTPQVRLCDCPGLVFPS- 394
+ VG VG PNVGKSS +N+++G+K V+ TPG TKHFQT+ ++ + LCDCPGLVFPS
Sbjct: 305 VVVGFVGYPNVGKSSTINALVGQKRTGVTSTPGKTKHFQTLIISEDLMLCDCPGLVFPSF 364
Query: 395 KVPRPIQILMGSYPIAQLREPYTAIRYLGE 484
R + G PI ++ E AI+ + E
Sbjct: 365 SSSRYEMVASGVLPIDRMTEHLEAIKVVAE 394
>At3g07050.1 68416.m00837 GTP-binding family protein contains Pfam
domain, PF01926: GTPase of unknown function
Length = 582
Score = 68.1 bits (159), Expect = 6e-12
Identities = 36/87 (41%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Frame = +2
Query: 215 TLTVGCVGQPNVGKSSLMNSVMGRKVVSVSRTPGHTKHFQTVYLTPQVRLCDCPGLVFPS 394
++TVG +G PNVGKSSL+NS+ VV+V TPG T+ Q V+L V+L DCPG+V
Sbjct: 253 SITVGIIGLPNVGKSSLINSLKRAHVVNVGATPGLTRSLQEVHLDKNVKLLDCPGVVMLK 312
Query: 395 KVPRPIQI-LMGSYPIAQLREPYTAIR 472
I L I +L +P + ++
Sbjct: 313 SSGNDASIALRNCKRIEKLDDPVSPVK 339
>At1g52980.1 68414.m05995 GTP-binding family protein contains Pfam
domain, PF01926: GTPase of unknown function
Length = 576
Score = 68.1 bits (159), Expect = 6e-12
Identities = 37/101 (36%), Positives = 58/101 (57%)
Frame = +2
Query: 188 FAHERYRNGTLTVGCVGQPNVGKSSLMNSVMGRKVVSVSRTPGHTKHFQTVYLTPQVRLC 367
FA + ++VG VG PNVGKSS++N++ + V V+ PG TK +Q + LT ++ L
Sbjct: 300 FARLKSDKQAISVGFVGYPNVGKSSVINTLRTKNVCKVAPIPGETKVWQYITLTKRIFLI 359
Query: 368 DCPGLVFPSKVPRPIQILMGSYPIAQLREPYTAIRYLGERL 490
DCPG+V+ S+ +L G + L + A ++GE L
Sbjct: 360 DCPGVVYQSRDTETDIVLKGVVRVTNLED---ASEHIGEVL 397
>At4g02790.1 68417.m00379 GTP-binding family protein contains Pfam
domain, PF01926: GTPase of unknown function
Length = 372
Score = 50.0 bits (114), Expect = 2e-06
Identities = 22/57 (38%), Positives = 36/57 (63%)
Frame = +2
Query: 215 TLTVGCVGQPNVGKSSLMNSVMGRKVVSVSRTPGHTKHFQTVYLTPQVRLCDCPGLV 385
++ G +G PNVGKSSL+N ++ RK+ + + PG T+ + V L + L D PG++
Sbjct: 213 SVRAGIIGYPNVGKSSLINRLLKRKICAAAPRPGVTREMKWVKLGKDLDLLDSPGML 269
>At1g30960.1 68414.m03791 GTP-binding protein (ERG) identical to
GTP-binding protein ERG SP:O82653 from [Arabidopsis
thaliana]
Length = 437
Score = 46.4 bits (105), Expect = 2e-05
Identities = 27/60 (45%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Frame = +2
Query: 215 TLTVGCVGQPNVGKSSLMNSVMGRKVVSVSRTPGHTKHFQTVYLT---PQVRLCDCPGLV 385
+L VG +G PN GKSSL N ++G KV + SR T H LT QV D PGL+
Sbjct: 153 SLNVGIIGPPNAGKSSLTNFMVGTKVAAASRKTNTTTHEVLGVLTKGDTQVCFFDTPGLM 212
>At5g66470.1 68418.m08382 expressed protein
Length = 427
Score = 42.3 bits (95), Expect = 3e-04
Identities = 25/64 (39%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Frame = +2
Query: 203 YRNGTLTVGCVGQPNVGKSSLMNSVMGRKVVSVSRTPGHTKH-FQTVYLTP--QVRLCDC 373
+R+G + V VG PNVGKS+L N ++G+K+ V+ P T+H + +P Q+ L D
Sbjct: 127 HRSGYVAV--VGMPNVGKSTLSNQMIGQKISIVTDKPQTTRHRILGICSSPEYQMILYDT 184
Query: 374 PGLV 385
PG++
Sbjct: 185 PGVI 188
>At5g58370.2 68418.m07309 expressed protein
Length = 465
Score = 41.5 bits (93), Expect = 6e-04
Identities = 24/56 (42%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +2
Query: 224 VGCVGQPNVGKSSLMNSVMGR-KVVSVSRTPGHTKHFQTVYLTPQVRLCDCPGLVF 388
+ G+ NVGKSSL+N++ + VV S PG T+ L P+VRL D PG F
Sbjct: 291 IAFAGRSNVGKSSLLNALTRQWGVVRTSDKPGLTQTINFFGLGPKVRLVDLPGYGF 346
>At5g58370.1 68418.m07308 expressed protein
Length = 446
Score = 41.5 bits (93), Expect = 6e-04
Identities = 24/56 (42%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +2
Query: 224 VGCVGQPNVGKSSLMNSVMGR-KVVSVSRTPGHTKHFQTVYLTPQVRLCDCPGLVF 388
+ G+ NVGKSSL+N++ + VV S PG T+ L P+VRL D PG F
Sbjct: 291 IAFAGRSNVGKSSLLNALTRQWGVVRTSDKPGLTQTINFFGLGPKVRLVDLPGYGF 346
>At5g11480.1 68418.m01340 expressed protein
Length = 318
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Frame = +2
Query: 233 VGQPNVGKSSLMNSVMGRKVVSV-SRTPGHTKHFQTVYLTPQVRLCDCPGLVFPS 394
VG+ NVGKSSL+NS++ RK +++ S+ PG T+ + + L D PG + S
Sbjct: 141 VGRSNVGKSSLLNSLVRRKRLALTSKKPGKTQCINHFRINDKWYLVDLPGYGYAS 195
>At2g22870.1 68415.m02715 expressed protein
Length = 300
Score = 36.3 bits (80), Expect = 0.022
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +2
Query: 224 VGCVGQPNVGKSSLMNSVMGRKVVSV-SRTPGHTKHFQTVYLTPQVRLCDCPGLVF 388
+ +G+ NVGKSSL+N ++ +K V++ S+ PG T+ + + D PG F
Sbjct: 123 IAILGRSNVGKSSLINCLVRKKEVALTSKKPGKTQLINHFLVNKSWYIVDLPGYGF 178
>At4g39520.1 68417.m05588 GTP-binding protein, putative similar to
SP|Q9Y295 Developmentally regulated GTP-binding protein
1 (DRG 1) {Homo sapiens}; contains Pfam profiles
PF02824: TGS domain, PF01018: GTP1/OBG family
Length = 369
Score = 35.5 bits (78), Expect = 0.038
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +2
Query: 206 RNGTLTVGCVGQPNVGKSSLMNSVMG--RKVVSVSRTPGHTKHFQTVYLTPQVRLCDCPG 379
++G VG VG P+VGKS+L+N + G +V S T Y +++L D PG
Sbjct: 62 KSGDSRVGLVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCIPGVITYRGAKIQLLDLPG 121
Query: 380 LVFPSK 397
++ +K
Sbjct: 122 IIEGAK 127
>At3g12080.1 68416.m01504 GTP-binding family protein contains Pfam
domain, PF01926: GTPase of unknown function
Length = 663
Score = 34.3 bits (75), Expect = 0.088
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +2
Query: 224 VGCVGQPNVGKSSLMNSVMGRKVVSVSRTPGHTK 325
V VG+PNVGKS+L N ++G V PG T+
Sbjct: 161 VAIVGRPNVGKSALFNRLVGENRAIVVDEPGVTR 194
Score = 32.7 bits (71), Expect = 0.27
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +2
Query: 197 ERYRNGTLTVGCVGQPNVGKSSLMNSVMGRKVVSVSRTPGHTK 325
E N + +G+PNVGKSS++N+++ VS G T+
Sbjct: 362 EEEENYIPAIAIIGRPNVGKSSILNALVREDRTIVSPVSGTTR 404
>At5g05000.3 68418.m00531 translocate of chloroplast 34 (TOC34) /
GTP-binding protein (OEP34) contains Pfam PF04548: AIG1
family;contains TIGRFAM TIGR00991: GTP-binding protein
and TIGR00231: small GTP-binding protein domain; 99.7%
identical to atToc34 protein (GI:11557975) [Arabidopsis
thaliana]; similar to Chain A, Pea Toc34 - A Novel
Gtpase Of The Chloroplast Protein Translocon
(GI:1865556) [Pisum sativum]; almost identical to
SP:Q38906 Translocase of chloroplast 34; identical to
cDNA GTP-binding protein (OEP34) GI:1151243
Length = 313
Score = 33.9 bits (74), Expect = 0.12
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = +2
Query: 215 TLTVGCVGQPNVGKSSLMNSVMGRKVVSVSRTPGHTKHFQTVYLTPQ---VRLCDCPGLV 385
+LTV +G+ VGKSS +NSV+G K +VS V T + + D PGL+
Sbjct: 38 SLTVLVMGKGGVGKSSTVNSVIGEKAAAVSTFQSEGLRPTLVSRTRSGFTLNIIDTPGLI 97
>At5g05000.2 68418.m00530 translocate of chloroplast 34 (TOC34) /
GTP-binding protein (OEP34) contains Pfam PF04548: AIG1
family;contains TIGRFAM TIGR00991: GTP-binding protein
and TIGR00231: small GTP-binding protein domain; 99.7%
identical to atToc34 protein (GI:11557975) [Arabidopsis
thaliana]; similar to Chain A, Pea Toc34 - A Novel
Gtpase Of The Chloroplast Protein Translocon
(GI:1865556) [Pisum sativum]; almost identical to
SP:Q38906 Translocase of chloroplast 34; identical to
cDNA GTP-binding protein (OEP34) GI:1151243
Length = 313
Score = 33.9 bits (74), Expect = 0.12
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = +2
Query: 215 TLTVGCVGQPNVGKSSLMNSVMGRKVVSVSRTPGHTKHFQTVYLTPQ---VRLCDCPGLV 385
+LTV +G+ VGKSS +NSV+G K +VS V T + + D PGL+
Sbjct: 38 SLTVLVMGKGGVGKSSTVNSVIGEKAAAVSTFQSEGLRPTLVSRTRSGFTLNIIDTPGLI 97
>At5g05000.1 68418.m00529 translocate of chloroplast 34 (TOC34) /
GTP-binding protein (OEP34) contains Pfam PF04548: AIG1
family;contains TIGRFAM TIGR00991: GTP-binding protein
and TIGR00231: small GTP-binding protein domain; 99.7%
identical to atToc34 protein (GI:11557975) [Arabidopsis
thaliana]; similar to Chain A, Pea Toc34 - A Novel
Gtpase Of The Chloroplast Protein Translocon
(GI:1865556) [Pisum sativum]; almost identical to
SP:Q38906 Translocase of chloroplast 34; identical to
cDNA GTP-binding protein (OEP34) GI:1151243
Length = 313
Score = 33.9 bits (74), Expect = 0.12
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = +2
Query: 215 TLTVGCVGQPNVGKSSLMNSVMGRKVVSVSRTPGHTKHFQTVYLTPQ---VRLCDCPGLV 385
+LTV +G+ VGKSS +NSV+G K +VS V T + + D PGL+
Sbjct: 38 SLTVLVMGKGGVGKSSTVNSVIGEKAAAVSTFQSEGLRPTLVSRTRSGFTLNIIDTPGLI 97
>At2g41670.1 68415.m05148 GTP-binding family protein contains Pfam
domain, PF01926: GTPase of unknown function
Length = 386
Score = 33.9 bits (74), Expect = 0.12
Identities = 27/76 (35%), Positives = 37/76 (48%), Gaps = 13/76 (17%)
Frame = +2
Query: 206 RNGTLTVGCVGQPNVGKSSLMNSV----MGR-------KVVSVSRTPGHTKHFQTVYLT- 349
R TL V VG PNVGKS+L+NS+ R K +V PG T+ +
Sbjct: 133 REPTLLVMVVGVPNVGKSALINSIHQIAAARFPVQERLKRATVGPLPGVTQDIAGFKIAH 192
Query: 350 -PQVRLCDCPGLVFPS 394
P + + D PG++ PS
Sbjct: 193 RPSIYVLDSPGVLVPS 208
>At5g39960.1 68418.m04846 GTP-binding family protein contains Pfam
domain, PF01926: GTPase of unknown function
Length = 616
Score = 32.7 bits (71), Expect = 0.27
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +2
Query: 218 LTVGCVGQPNVGKSSLMNSVMGRKVVSVSRTPGHTK 325
L + VG+PNVGKS+L+N+++ + V V G T+
Sbjct: 313 LQLAIVGKPNVGKSTLLNALLEEERVLVGPEAGLTR 348
>At1g78010.1 68414.m09091 tRNA modification GTPase, putative similar
to tRNA modification GTPase trmE [strain PCC 7120,
Anabaena sp.] SWISS-PROT:Q8YN91
Length = 560
Score = 32.3 bits (70), Expect = 0.35
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +2
Query: 194 HERYRNGTLTVGCVGQPNVGKSSLMNSVMGRKVVSVSRTPGHTK 325
+++ L + VG+PNVGKSSL+N+ + V+ G T+
Sbjct: 310 YDKLLQSGLQIAIVGRPNVGKSSLLNAWSKSERAIVTEVAGTTR 353
>At1g50920.1 68414.m05725 GTP-binding protein-related similar to
GTP-binding protein SP:Q99ME9 from [Mus musculus]
Length = 671
Score = 31.1 bits (67), Expect = 0.82
Identities = 24/60 (40%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Frame = +2
Query: 215 TLTVGCVGQPNVGKSSLMNSVMGRKVVSVSRTPGHTKHF---QTVYLTPQVRLCDCPGLV 385
T TV G PNVGKSS MN V R V V TK T Y + ++ D PG++
Sbjct: 168 TRTVLICGYPNVGKSSFMNKVT-RADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGIL 226
>At1g21430.1 68414.m02680 flavin-containing monooxygenase family
protein / FMO family protein similar to
flavin-containing monooxygenases YUCCA [gi:16555352],
YUCCA2 [gi:16555354], and YUCCA3 [gi:16555356] from
Arabidopsis thaliana
Length = 391
Score = 31.1 bits (67), Expect = 0.82
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +2
Query: 206 RNGTLTVGCVGQPNVGKSSLMNSVMGRKVVSVSRTPGHTKHFQTV 340
R+ T+ VGCVG+ GK ++ S+ + +V G+TK+ ++
Sbjct: 266 RSATIDVGCVGEIKSGKIQVVTSIKRIEGKTVEFIDGNTKNVDSI 310
>At1g10300.1 68414.m01160 GTP-binding protein-related contains
similarity to nucleolar GTP-binding protein 1 SP: Q9BZE4
from [Homo sapiens];
Length = 687
Score = 31.1 bits (67), Expect = 0.82
Identities = 29/82 (35%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Frame = +2
Query: 215 TLTVGCVGQPNVGKSSLMNSVMGRKVVSVSRTPGHTKHF---QTVYLTPQVRLCDCPGLV 385
T T+ G PNVGKSS MN V R V+V TK T Y + ++ D PGL+
Sbjct: 197 TRTLLICGCPNVGKSSFMNKVT-RADVAVQPYAFTTKSLFLGHTDYKCLRYQVIDTPGLL 255
Query: 386 FPSKVPRPIQILMGSYPIAQLR 451
R I L +A +R
Sbjct: 256 DREIEDRNIIELCSITALAHIR 277
>At3g17910.1 68416.m02281 surfeit 1 (SURF1) identical to Surfeit 1
GB:AAF19609 from [Arabidopsis thaliana]
Length = 354
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +2
Query: 398 VPRPIQILMGSYPIAQLREPYTAIRYLGERLNL-PQLLRIEHP 523
+P I +GS+ I + E + + Y +RLN+ P L I+HP
Sbjct: 80 LPGAITFGLGSWQIVRREEKFKTLEYQQQRLNMEPIKLNIDHP 122
>At1g56050.1 68414.m06436 GTP-binding protein-related similar to
GTP-binding protein GI:10176676 from [Bacillus
halodurans]
Length = 421
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +2
Query: 215 TLTVGCVGQPNVGKSSLMNSVM 280
+L G VG PNVGKS+L N+V+
Sbjct: 53 SLKAGIVGLPNVGKSTLFNAVV 74
>At3g16620.1 68416.m02124 chloroplast outer membrane protein,
putative similar to chloroplast protein import component
Toc159 [Pisum sativum] GI:8489806, chloroplast outer
envelope protein 86 [Pisum sativum] GI:599958,
GTP-binding protein [Pisum sativum] GI:576509
Length = 1089
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = +2
Query: 221 TVGCVGQPNVGKSSLMNSVMGRKVVSVSRTPGHTKHFQTVYLTPQ---VRLCDCPGLV 385
T+ +G+ VGKS+ +NS+ +S TK Q + Q VR+ D PGL+
Sbjct: 458 TIMVLGKSGVGKSATINSIFDELKISTDAFQVGTKKVQDIEGFVQGIKVRVIDTPGLL 515
>At1g33970.1 68414.m04212 avirulence-responsive protein, putative /
avirulence induced gene protein, putative / AIG protein,
putative similar to SP|P54120 AIG1 protein {Arabidopsis
thaliana}; contains Pfam profile PF04548: AIG1 family
Length = 342
Score = 29.9 bits (64), Expect = 1.9
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Frame = +2
Query: 209 NGTLTVGCVGQPNVGKSSLMNSVMGRKVV-SVSRTPGHTKHFQTVYLTPQ----VRLCDC 373
N T+ VG+ GKS+ NS++GRK S +RT G T ++ + + + + D
Sbjct: 22 NPKRTLVLVGRTGNGKSATGNSILGRKAFRSRARTVGVTSTCESQRVVQEDGDIINVVDT 81
Query: 374 PGL 382
PGL
Sbjct: 82 PGL 84
>At1g30580.1 68414.m03741 expressed protein
Length = 394
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +2
Query: 218 LTVGCVGQPNVGKSSLMNSV 277
L +G VG PNVGKS+L N++
Sbjct: 25 LKIGIVGLPNVGKSTLFNTL 44
>At4g02510.1 68417.m00343 chloroplast outer membrane protein, putative
similar to chloroplast protein import component Toc159
[Pisum sativum] GI:8489806, chloroplast outer envelope
protein 86 [Pisum sativum] GI:599958, GTP-binding protein
[Pisum sativum] GI:576509
Length = 1503
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Frame = +2
Query: 215 TLTVGCVGQPNVGKSSLMNSVMGRKVVSVSRTPGHTKHFQTVYLT---PQVRLCDCPGL 382
+L + +G+ VGKS+ +NS++G ++ S+ T + + T ++ D PGL
Sbjct: 855 SLNILVLGKAGVGKSATINSILGNQIASIDAFGLSTTSVREISGTVNGVKITFIDTPGL 913
>At5g45240.1 68418.m05552 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 812
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +2
Query: 212 GTLTVGCVGQPNVGKSSLMNSVMGRKVVSVSRTPGHTKHFQTVY 343
G T+G +G+P +GK++L +V R++V K F T Y
Sbjct: 175 GLRTLGILGKPGIGKTTLARAVF-RRMVGGYDASHFVKDFHTRY 217
>At4g09980.1 68417.m01634 methyltransferase MT-A70 family protein
low similarity to SP|P25583 Karyogamy protein KAR4
{Saccharomyces cerevisiae},
(N6-adenosine)-methyltransferase [Mus musculus]
GI:10179948; contains Pfam profile PF05063: MT-A70
(S-adenosylmethionine-binding subunit of human mRNA:m6A
methyl-transferase (MTase))
Length = 775
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/38 (28%), Positives = 18/38 (47%)
Frame = -1
Query: 324 LVWPGVRDTETTLRPITEFMSEDLPTLGWPTQPTVSVP 211
L+WPG R + + P+ +S P P P++ P
Sbjct: 470 LIWPGARGVDGNMLPVPPVLSPLPPGPSGPRFPSIGTP 507
>At5g57960.1 68418.m07252 GTP-binding family protein similar to
SP|P25519 GTP-binding protein hflX {Escherichia coli}
Length = 540
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2
Query: 224 VGCVGQPNVGKSSLMNSVMGRKVVSVSR 307
V VG N GKS+L+N + G V++ +R
Sbjct: 312 VSLVGYTNAGKSTLLNQLTGANVLAENR 339
>At5g29070.1 68418.m03617 expressed protein
Length = 307
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +3
Query: 567 GRRNAAILQRNLPDWTRTEQRTACSXWALDG 659
GR + A L R DWTR T WA G
Sbjct: 88 GRHHQATLDRRPTDWTRCGSDTQPRPWATQG 118
>At1g33930.1 68414.m04205 avirulence-responsive family protein /
avirulence induced gene (AIG1) family protein similar to
SP|P54120 AIG1 protein {Arabidopsis thaliana}; contains
Pfam profile PF04548: AIG1 family
Length = 336
Score = 28.3 bits (60), Expect = 5.8
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Frame = +2
Query: 233 VGQPNVGKSSLMNSVMGRKVV-SVSRTPGHTKHFQTV-YLTPQ---VRLCDCPGL 382
VG+ GKS+ NS++GRKV S + G T +T +TP + + D PGL
Sbjct: 41 VGRTGNGKSATGNSIIGRKVFESKYQAVGVTTRCKTFRAVTPDGPIINVIDTPGL 95
>At4g36150.1 68417.m05145 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1179
Score = 27.9 bits (59), Expect = 7.6
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +2
Query: 215 TLTVGCVGQPNVGKSSL 265
TLT+G VG P +GK++L
Sbjct: 236 TLTIGVVGMPGIGKTTL 252
>At2g27520.1 68415.m03329 F-box family protein contains Pfam
profile: PF00646 F-box domain
Length = 347
Score = 27.9 bits (59), Expect = 7.6
Identities = 11/45 (24%), Positives = 21/45 (46%)
Frame = +1
Query: 550 GHLRWLGEETQLSYSEICQIGHVQSSEQPAXDGRWTVEYAFGCGL 684
G RW+ T +Y+ +G+ +S + + D + +GC L
Sbjct: 110 GQTRWIEPRTDYNYNHDIALGYGNNSTKKSYDSYKILRITYGCKL 154
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,299,225
Number of Sequences: 28952
Number of extensions: 349518
Number of successful extensions: 1052
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1018
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1049
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1663169840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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