Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0988
         (650 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...   124   6e-31
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...   124   6e-31
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...   107   6e-26
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    27   0.13 
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    22   5.0  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   8.8  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   8.8  

>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score =  124 bits (299), Expect = 6e-31
 Identities = 56/89 (62%), Positives = 75/89 (84%)
 Frame = +1

Query: 4   QAXIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVG 183
           QA IEIDSLF+GID+ T+ITRARFE++N D F+  ++PV+K L+DAK+ K+ +H+IVLVG
Sbjct: 107 QASIEIDSLFDGIDYSTTITRARFEDINMDYFKKCIDPVDKVLQDAKIGKSAVHEIVLVG 166

Query: 184 GSTRIPKVXKLLQDFFNGKELNKSINPXE 270
           GSTRIPKV +L+ ++FNGKE  +SINP E
Sbjct: 167 GSTRIPKVQQLITEYFNGKEPCRSINPDE 195


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score =  124 bits (299), Expect = 6e-31
 Identities = 56/89 (62%), Positives = 75/89 (84%)
 Frame = +1

Query: 4   QAXIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVG 183
           QA IEIDSLF+GID+ T+ITRARFE++N D F+  ++PV+K L+DAK+ K+ +H+IVLVG
Sbjct: 107 QASIEIDSLFDGIDYSTTITRARFEDINMDYFKKCIDPVDKVLQDAKIGKSAVHEIVLVG 166

Query: 184 GSTRIPKVXKLLQDFFNGKELNKSINPXE 270
           GSTRIPKV +L+ ++FNGKE  +SINP E
Sbjct: 167 GSTRIPKVQQLITEYFNGKEPCRSINPDE 195


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score =  107 bits (258), Expect = 6e-26
 Identities = 50/86 (58%), Positives = 66/86 (76%)
 Frame = +1

Query: 13  IEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGST 192
           + I++L    DF  ++TRA+FEELN D F  T++PV+K L DA M K QI +IVLVGGST
Sbjct: 109 LTIENLLADYDFSETLTRAKFEELNNDQFLKTLKPVKKVLEDADMTKDQIDEIVLVGGST 168

Query: 193 RIPKVXKLLQDFFNGKELNKSINPXE 270
           RIPK+ +L++DFF+GKELN+ INP E
Sbjct: 169 RIPKIQQLIKDFFDGKELNRGINPDE 194


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 27.1 bits (57), Expect = 0.13
 Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
 Frame = -2

Query: 163 GFEPY-PSWHHGETSPLAPW*T*TDRRSAPRSEHE 62
           GF P+ PS H G   P  PW T  D R   +  H+
Sbjct: 468 GFGPWKPSMHGGVCDPYTPWHTFYDYRPWVQHGHQ 502


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -2

Query: 178 PVQYRGFEPYPSWHHGETSPLAP 110
           PV      P+ + HHG T P +P
Sbjct: 17  PVVLDVIPPHYNIHHGATPPQSP 39


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = -3

Query: 204 LGDTSGATHQYNIVDLSLIHLGITE 130
           LG+T  +   Y++V++S IH  + +
Sbjct: 194 LGETWTSLSVYHLVEISEIHFDLCQ 218


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = -3

Query: 204 LGDTSGATHQYNIVDLSLIHLGITE 130
           LG+T  +   Y++V++S IH  + +
Sbjct: 190 LGETWTSLSVYHLVEISEIHFDLCQ 214


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,159
Number of Sequences: 336
Number of extensions: 2618
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)