BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brP-0988 (650 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 237 6e-63 SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 227 8e-60 SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 214 6e-56 SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 188 5e-48 SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 124 6e-29 SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 97 1e-20 SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 81 6e-16 SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 2e-11 SB_47390| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05 SB_24074| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.050 SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.35 SB_26282| Best HMM Match : Tctex-1 (HMM E-Value=3.1e-14) 31 0.62 SB_8849| Best HMM Match : F-box (HMM E-Value=0.86) 31 0.81 SB_25455| Best HMM Match : DUF948 (HMM E-Value=0.11) 28 5.7 >SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) Length = 1097 Score = 237 bits (580), Expect = 6e-63 Identities = 126/203 (62%), Positives = 137/203 (67%), Gaps = 2/203 (0%) Frame = +1 Query: 4 QAXIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKM--DKAQIHDIVL 177 QA IEIDSLFEGIDFYTSITRARFEELN DLF+ T EPVE+++RD+K+ K IHDIVL Sbjct: 279 QASIEIDSLFEGIDFYTSITRARFEELNQDLFKKTTEPVEQAIRDSKIPGGKESIHDIVL 338 Query: 178 VGGSTRIPKVXKLLQDFFNGKELNKSINPXEXXXXXXXXXXXILHGDKXXXXXXXXXXXX 357 VGGSTRIPK+ K+LQ+ F GKELNKSINP E ILHGDK Sbjct: 339 VGGSTRIPKIQKMLQELFGGKELNKSINPDEAVAYGAAVQAAILHGDKDDTVKDLLLLDV 398 Query: 358 XXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPXXLIQVFEGERAMTKR*QLA 537 GIETAGGVM+ LIKRN YSDNQP LIQVFEGER+MT L Sbjct: 399 APLSMGIETAGGVMSVLIKRNSTIPTKQTQTFTTYSDNQPGVLIQVFEGERSMTAHNNLL 458 Query: 538 SVKFELTXIPPAPXGVPQIEVTF 606 KFELT IPPAP GVPQIEVTF Sbjct: 459 G-KFELTGIPPAPRGVPQIEVTF 480 >SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 746 Score = 227 bits (554), Expect = 8e-60 Identities = 117/202 (57%), Positives = 139/202 (68%), Gaps = 1/202 (0%) Frame = +1 Query: 4 QAXIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMD-KAQIHDIVLV 180 QA IEIDSL++GIDFYTSITRARFEE+NA LF+ T+EPVEK+++D+K++ K +I +IV+V Sbjct: 372 QASIEIDSLYDGIDFYTSITRARFEEMNAHLFKKTLEPVEKAIKDSKLESKEKIDEIVMV 431 Query: 181 GGSTRIPKVXKLLQDFFNGKELNKSINPXEXXXXXXXXXXXILHGDKXXXXXXXXXXXXX 360 GGSTRIPK+ LLQ+FFNGKELNKSINP E ILHGDK Sbjct: 432 GGSTRIPKIQSLLQNFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEATQDLLLLDVA 491 Query: 361 XXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPXXLIQVFEGERAMTKR*QLAS 540 G+ETAGGVMT IKRN YSDNQ LIQV+EGER++TK L Sbjct: 492 PLTLGLETAGGVMTAAIKRNTTIPTKQTQTFTTYSDNQTSVLIQVYEGERSLTKDNNLLG 551 Query: 541 VKFELTXIPPAPXGVPQIEVTF 606 KFEL+ IPPAP GVPQI+VTF Sbjct: 552 -KFELSGIPPAPRGVPQIDVTF 572 >SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) Length = 640 Score = 214 bits (522), Expect = 6e-56 Identities = 109/201 (54%), Positives = 132/201 (65%) Frame = +1 Query: 4 QAXIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVG 183 +A IE+DSLFEGIDFYT I+RARFE+L +DLF S ++PV K+L DAK K+ IH++VLVG Sbjct: 280 EASIEVDSLFEGIDFYTKISRARFEDLCSDLFLSCLDPVNKALSDAKFSKSDIHEVVLVG 339 Query: 184 GSTRIPKVXKLLQDFFNGKELNKSINPXEXXXXXXXXXXXILHGDKXXXXXXXXXXXXXX 363 GSTR+PK+ K+L+++F+GK LNKSINP E IL GDK Sbjct: 340 GSTRVPKIQKMLEEYFSGKSLNKSINPDEAVAYGAAVQAAILSGDKSDEVKDVLLVDVAP 399 Query: 364 XXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPXXLIQVFEGERAMTKR*QLASV 543 GIETAG VMT LI+RN YSDNQP I+VFEGER +TK L Sbjct: 400 LSLGIETAGEVMTKLIERNARIPTKATQTFTTYSDNQPAVTIRVFEGERPLTKHNNLLG- 458 Query: 544 KFELTXIPPAPXGVPQIEVTF 606 KF+L+ IPPAP GVPQIEVTF Sbjct: 459 KFDLSGIPPAPRGVPQIEVTF 479 >SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) Length = 1327 Score = 188 bits (457), Expect = 5e-48 Identities = 103/201 (51%), Positives = 124/201 (61%) Frame = +1 Query: 4 QAXIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVG 183 QA +EI+S FEG DF +TRARFEELNA LF+ST++PV+K L DA + K++IH+IVLVG Sbjct: 976 QARVEIESFFEGEDFSEMLTRARFEELNAKLFKSTLKPVQKVLEDADLKKSEIHEIVLVG 1035 Query: 184 GSTRIPKVXKLLQDFFNGKELNKSINPXEXXXXXXXXXXXILHGDKXXXXXXXXXXXXXX 363 GSTRIPKV +L++DFF GKE ++ INP E +L G++ Sbjct: 1036 GSTRIPKVQQLVKDFFEGKEPSRGINPDEAVAYGAAVQAGVLGGEE--DTGEVVLLDVNP 1093 Query: 364 XXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPXXLIQVFEGERAMTKR*QLASV 543 GIET GGVMT LI RN +DNQ IQVFEGER MTK Sbjct: 1094 LTLGIETVGGVMTKLISRNTVIPTKKSQVFSTAADNQNTVTIQVFEGERPMTKDNHPLG- 1152 Query: 544 KFELTXIPPAPXGVPQIEVTF 606 KF+L IPPAP GVPQIEVTF Sbjct: 1153 KFDLNGIPPAPRGVPQIEVTF 1173 >SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 766 Score = 124 bits (299), Expect = 6e-29 Identities = 73/183 (39%), Positives = 101/183 (55%) Frame = +1 Query: 58 ITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVXKLLQDFFNG 237 ++R++FE L ADL T+ P +K L+DA+++K +I D++LVGG TR+PKV + +QD F G Sbjct: 108 LSRSKFESLVADLINRTVGPCKKCLQDAEINKGEIGDVLLVGGMTRMPKVQQTVQDIF-G 166 Query: 238 KELNKSINPXEXXXXXXXXXXXILHGDKXXXXXXXXXXXXXXXXXGIETAGGVMTTLIKR 417 + +K++NP E +L GD GIET GGV T LI R Sbjct: 167 RVPSKAVNPDEAVAIGAAIQGGVLAGD----VKDVLLLDVTPLSLGIETLGGVFTKLITR 222 Query: 418 NXXXXXXXXXXXXXYSDNQPXXLIQVFEGERAMTKR*QLASVKFELTXIPPAPXGVPQIE 597 N +D Q I+VF+GER M +L +F+L IPPAP GVPQ+E Sbjct: 223 NTTIPTKKSQVFSTAADGQTQVEIKVFQGEREMAIDNKLLG-QFQLVGIPPAPRGVPQVE 281 Query: 598 VTF 606 VTF Sbjct: 282 VTF 284 >SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) Length = 212 Score = 96.7 bits (230), Expect = 1e-20 Identities = 57/153 (37%), Positives = 81/153 (52%) Frame = +1 Query: 58 ITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVXKLLQDFFNG 237 ++R++FE L ADL T+ P +K L+DA+++K +I D++LVGG TR+PKV + +QD F G Sbjct: 53 LSRSKFESLVADLINRTVGPCKKCLQDAEINKGEIGDVLLVGGMTRMPKVQQTVQDIF-G 111 Query: 238 KELNKSINPXEXXXXXXXXXXXILHGDKXXXXXXXXXXXXXXXXXGIETAGGVMTTLIKR 417 + +K++NP E +L GD GIET GGV T LI R Sbjct: 112 RVPSKAVNPDEAVAIGAAIQGGVLAGD----VKDVLLLDVTPLSLGIETLGGVFTKLITR 167 Query: 418 NXXXXXXXXXXXXXYSDNQPXXLIQVFEGERAM 516 N +D Q I+VF+GER M Sbjct: 168 NTTIPTKKSQVFSTAADGQTQVEIKVFQGEREM 200 >SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) Length = 437 Score = 81.4 bits (192), Expect = 6e-16 Identities = 35/85 (41%), Positives = 60/85 (70%), Gaps = 3/85 (3%) Frame = +1 Query: 19 IDSLFEG---IDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGS 189 + SL EG + F +I+R FE +N DLF+ ++P+ + L + ++ K ++ ++VLVGGS Sbjct: 314 LPSLSEGKKIVKFKETISRKMFETINEDLFKKVLQPIRRVLAEVELPKEEVDEVVLVGGS 373 Query: 190 TRIPKVXKLLQDFFNGKELNKSINP 264 TR+PK+ +L+Q+FF+GK N +I+P Sbjct: 374 TRVPKIRQLIQEFFDGKPPNVAIDP 398 >SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1019 Score = 66.5 bits (155), Expect = 2e-11 Identities = 34/85 (40%), Positives = 46/85 (54%) Frame = +1 Query: 16 EIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTR 195 +I+ +F+G DF +TR EE+ DLF PV ++L+ A M I +VLVGG R Sbjct: 267 QIEGVFDGKDFRVKVTREELEEMCQDLFDRVAGPVNRALKSASMTMNDIDSVVLVGGGIR 326 Query: 196 IPKVXKLLQDFFNGKELNKSINPXE 270 +PKV L EL K+IN E Sbjct: 327 VPKVQDALLRAVKKPELAKNINADE 351 >SB_47390| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 168 Score = 46.0 bits (104), Expect = 3e-05 Identities = 21/59 (35%), Positives = 36/59 (61%) Frame = +1 Query: 145 MDKAQIHDIVLVGGSTRIPKVXKLLQDFFNGKELNKSINPXEXXXXXXXXXXXILHGDK 321 + ++ + ++LVGG+TR PK+ +LL+++F GKE+ + I+P E IL G K Sbjct: 35 LKQSSMIQVILVGGATRTPKIQQLLKNYFVGKEICRRISPDEVVAYGAAVQASILMGRK 93 >SB_24074| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 87 Score = 35.1 bits (77), Expect = 0.050 Identities = 16/38 (42%), Positives = 26/38 (68%) Frame = +1 Query: 157 QIHDIVLVGGSTRIPKVXKLLQDFFNGKELNKSINPXE 270 +I + +VGGSTRIP + ++++ F GKEL ++N E Sbjct: 6 EIDSVEIVGGSTRIPAIKDIIKNVF-GKELMTTMNADE 42 >SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1068 Score = 32.3 bits (70), Expect = 0.35 Identities = 18/58 (31%), Positives = 31/58 (53%) Frame = +1 Query: 1 AQAXIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIV 174 ++ I I+ E D + + RA+FEEL ADL + P+ +L A+ K + ++V Sbjct: 339 SEIPINIECFMEDKDVHGRMKRAQFEELAADLLKLVEAPLRSAL--AQSGKYSVKNVV 394 >SB_26282| Best HMM Match : Tctex-1 (HMM E-Value=3.1e-14) Length = 273 Score = 31.5 bits (68), Expect = 0.62 Identities = 18/52 (34%), Positives = 27/52 (51%) Frame = -3 Query: 375 TEGKGCYIKQQQIXHLLRLVTVQDSSLDSCTISYGLXRVNRFVELLSIKEIL 220 T G I+QQQ LRLVT Q + ++ + L ++ FV LL K ++ Sbjct: 9 TAGAAVAIEQQQDSAYLRLVTPQRTETETYVVLCNLRQLQTFVSLLIAKYLI 60 >SB_8849| Best HMM Match : F-box (HMM E-Value=0.86) Length = 1222 Score = 31.1 bits (67), Expect = 0.81 Identities = 18/52 (34%), Positives = 32/52 (61%) Frame = -3 Query: 450 CXSLFSGDGSVTLDECGHDTSSSLNTEGKGCYIKQQQIXHLLRLVTVQDSSL 295 C S F DG+V LDE + +++SL++ G C + ++ + + TV++SSL Sbjct: 1155 CDSEF--DGAVLLDEWNYGSNASLSSCGSTC--SESRLSYFIGQDTVEESSL 1202 >SB_25455| Best HMM Match : DUF948 (HMM E-Value=0.11) Length = 260 Score = 28.3 bits (60), Expect = 5.7 Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 2/42 (4%) Frame = +1 Query: 19 IDSLFEGIDFYTSITRARFEELNAD--LFRSTMEPVEKSLRD 138 +DSL +DF T+ T A F +LN R T+ + SL + Sbjct: 168 LDSLAVRVDFTTNTTNALFTQLNTTDAAIRDTLSQINSSLSE 209 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 18,450,439 Number of Sequences: 59808 Number of extensions: 357537 Number of successful extensions: 3244 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 3122 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3231 length of database: 16,821,457 effective HSP length: 79 effective length of database: 12,096,625 effective search space used: 1657237625 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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