Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0988
(650 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 237 6e-63
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 227 8e-60
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 214 6e-56
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 188 5e-48
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 124 6e-29
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 97 1e-20
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 81 6e-16
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 2e-11
SB_47390| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_24074| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.050
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.35
SB_26282| Best HMM Match : Tctex-1 (HMM E-Value=3.1e-14) 31 0.62
SB_8849| Best HMM Match : F-box (HMM E-Value=0.86) 31 0.81
SB_25455| Best HMM Match : DUF948 (HMM E-Value=0.11) 28 5.7
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 237 bits (580), Expect = 6e-63
Identities = 126/203 (62%), Positives = 137/203 (67%), Gaps = 2/203 (0%)
Frame = +1
Query: 4 QAXIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKM--DKAQIHDIVL 177
QA IEIDSLFEGIDFYTSITRARFEELN DLF+ T EPVE+++RD+K+ K IHDIVL
Sbjct: 279 QASIEIDSLFEGIDFYTSITRARFEELNQDLFKKTTEPVEQAIRDSKIPGGKESIHDIVL 338
Query: 178 VGGSTRIPKVXKLLQDFFNGKELNKSINPXEXXXXXXXXXXXILHGDKXXXXXXXXXXXX 357
VGGSTRIPK+ K+LQ+ F GKELNKSINP E ILHGDK
Sbjct: 339 VGGSTRIPKIQKMLQELFGGKELNKSINPDEAVAYGAAVQAAILHGDKDDTVKDLLLLDV 398
Query: 358 XXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPXXLIQVFEGERAMTKR*QLA 537
GIETAGGVM+ LIKRN YSDNQP LIQVFEGER+MT L
Sbjct: 399 APLSMGIETAGGVMSVLIKRNSTIPTKQTQTFTTYSDNQPGVLIQVFEGERSMTAHNNLL 458
Query: 538 SVKFELTXIPPAPXGVPQIEVTF 606
KFELT IPPAP GVPQIEVTF
Sbjct: 459 G-KFELTGIPPAPRGVPQIEVTF 480
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 227 bits (554), Expect = 8e-60
Identities = 117/202 (57%), Positives = 139/202 (68%), Gaps = 1/202 (0%)
Frame = +1
Query: 4 QAXIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMD-KAQIHDIVLV 180
QA IEIDSL++GIDFYTSITRARFEE+NA LF+ T+EPVEK+++D+K++ K +I +IV+V
Sbjct: 372 QASIEIDSLYDGIDFYTSITRARFEEMNAHLFKKTLEPVEKAIKDSKLESKEKIDEIVMV 431
Query: 181 GGSTRIPKVXKLLQDFFNGKELNKSINPXEXXXXXXXXXXXILHGDKXXXXXXXXXXXXX 360
GGSTRIPK+ LLQ+FFNGKELNKSINP E ILHGDK
Sbjct: 432 GGSTRIPKIQSLLQNFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEATQDLLLLDVA 491
Query: 361 XXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPXXLIQVFEGERAMTKR*QLAS 540
G+ETAGGVMT IKRN YSDNQ LIQV+EGER++TK L
Sbjct: 492 PLTLGLETAGGVMTAAIKRNTTIPTKQTQTFTTYSDNQTSVLIQVYEGERSLTKDNNLLG 551
Query: 541 VKFELTXIPPAPXGVPQIEVTF 606
KFEL+ IPPAP GVPQI+VTF
Sbjct: 552 -KFELSGIPPAPRGVPQIDVTF 572
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 214 bits (522), Expect = 6e-56
Identities = 109/201 (54%), Positives = 132/201 (65%)
Frame = +1
Query: 4 QAXIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVG 183
+A IE+DSLFEGIDFYT I+RARFE+L +DLF S ++PV K+L DAK K+ IH++VLVG
Sbjct: 280 EASIEVDSLFEGIDFYTKISRARFEDLCSDLFLSCLDPVNKALSDAKFSKSDIHEVVLVG 339
Query: 184 GSTRIPKVXKLLQDFFNGKELNKSINPXEXXXXXXXXXXXILHGDKXXXXXXXXXXXXXX 363
GSTR+PK+ K+L+++F+GK LNKSINP E IL GDK
Sbjct: 340 GSTRVPKIQKMLEEYFSGKSLNKSINPDEAVAYGAAVQAAILSGDKSDEVKDVLLVDVAP 399
Query: 364 XXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPXXLIQVFEGERAMTKR*QLASV 543
GIETAG VMT LI+RN YSDNQP I+VFEGER +TK L
Sbjct: 400 LSLGIETAGEVMTKLIERNARIPTKATQTFTTYSDNQPAVTIRVFEGERPLTKHNNLLG- 458
Query: 544 KFELTXIPPAPXGVPQIEVTF 606
KF+L+ IPPAP GVPQIEVTF
Sbjct: 459 KFDLSGIPPAPRGVPQIEVTF 479
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 188 bits (457), Expect = 5e-48
Identities = 103/201 (51%), Positives = 124/201 (61%)
Frame = +1
Query: 4 QAXIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVG 183
QA +EI+S FEG DF +TRARFEELNA LF+ST++PV+K L DA + K++IH+IVLVG
Sbjct: 976 QARVEIESFFEGEDFSEMLTRARFEELNAKLFKSTLKPVQKVLEDADLKKSEIHEIVLVG 1035
Query: 184 GSTRIPKVXKLLQDFFNGKELNKSINPXEXXXXXXXXXXXILHGDKXXXXXXXXXXXXXX 363
GSTRIPKV +L++DFF GKE ++ INP E +L G++
Sbjct: 1036 GSTRIPKVQQLVKDFFEGKEPSRGINPDEAVAYGAAVQAGVLGGEE--DTGEVVLLDVNP 1093
Query: 364 XXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPXXLIQVFEGERAMTKR*QLASV 543
GIET GGVMT LI RN +DNQ IQVFEGER MTK
Sbjct: 1094 LTLGIETVGGVMTKLISRNTVIPTKKSQVFSTAADNQNTVTIQVFEGERPMTKDNHPLG- 1152
Query: 544 KFELTXIPPAPXGVPQIEVTF 606
KF+L IPPAP GVPQIEVTF
Sbjct: 1153 KFDLNGIPPAPRGVPQIEVTF 1173
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 124 bits (299), Expect = 6e-29
Identities = 73/183 (39%), Positives = 101/183 (55%)
Frame = +1
Query: 58 ITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVXKLLQDFFNG 237
++R++FE L ADL T+ P +K L+DA+++K +I D++LVGG TR+PKV + +QD F G
Sbjct: 108 LSRSKFESLVADLINRTVGPCKKCLQDAEINKGEIGDVLLVGGMTRMPKVQQTVQDIF-G 166
Query: 238 KELNKSINPXEXXXXXXXXXXXILHGDKXXXXXXXXXXXXXXXXXGIETAGGVMTTLIKR 417
+ +K++NP E +L GD GIET GGV T LI R
Sbjct: 167 RVPSKAVNPDEAVAIGAAIQGGVLAGD----VKDVLLLDVTPLSLGIETLGGVFTKLITR 222
Query: 418 NXXXXXXXXXXXXXYSDNQPXXLIQVFEGERAMTKR*QLASVKFELTXIPPAPXGVPQIE 597
N +D Q I+VF+GER M +L +F+L IPPAP GVPQ+E
Sbjct: 223 NTTIPTKKSQVFSTAADGQTQVEIKVFQGEREMAIDNKLLG-QFQLVGIPPAPRGVPQVE 281
Query: 598 VTF 606
VTF
Sbjct: 282 VTF 284
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 96.7 bits (230), Expect = 1e-20
Identities = 57/153 (37%), Positives = 81/153 (52%)
Frame = +1
Query: 58 ITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVXKLLQDFFNG 237
++R++FE L ADL T+ P +K L+DA+++K +I D++LVGG TR+PKV + +QD F G
Sbjct: 53 LSRSKFESLVADLINRTVGPCKKCLQDAEINKGEIGDVLLVGGMTRMPKVQQTVQDIF-G 111
Query: 238 KELNKSINPXEXXXXXXXXXXXILHGDKXXXXXXXXXXXXXXXXXGIETAGGVMTTLIKR 417
+ +K++NP E +L GD GIET GGV T LI R
Sbjct: 112 RVPSKAVNPDEAVAIGAAIQGGVLAGD----VKDVLLLDVTPLSLGIETLGGVFTKLITR 167
Query: 418 NXXXXXXXXXXXXXYSDNQPXXLIQVFEGERAM 516
N +D Q I+VF+GER M
Sbjct: 168 NTTIPTKKSQVFSTAADGQTQVEIKVFQGEREM 200
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 81.4 bits (192), Expect = 6e-16
Identities = 35/85 (41%), Positives = 60/85 (70%), Gaps = 3/85 (3%)
Frame = +1
Query: 19 IDSLFEG---IDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGS 189
+ SL EG + F +I+R FE +N DLF+ ++P+ + L + ++ K ++ ++VLVGGS
Sbjct: 314 LPSLSEGKKIVKFKETISRKMFETINEDLFKKVLQPIRRVLAEVELPKEEVDEVVLVGGS 373
Query: 190 TRIPKVXKLLQDFFNGKELNKSINP 264
TR+PK+ +L+Q+FF+GK N +I+P
Sbjct: 374 TRVPKIRQLIQEFFDGKPPNVAIDP 398
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 66.5 bits (155), Expect = 2e-11
Identities = 34/85 (40%), Positives = 46/85 (54%)
Frame = +1
Query: 16 EIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTR 195
+I+ +F+G DF +TR EE+ DLF PV ++L+ A M I +VLVGG R
Sbjct: 267 QIEGVFDGKDFRVKVTREELEEMCQDLFDRVAGPVNRALKSASMTMNDIDSVVLVGGGIR 326
Query: 196 IPKVXKLLQDFFNGKELNKSINPXE 270
+PKV L EL K+IN E
Sbjct: 327 VPKVQDALLRAVKKPELAKNINADE 351
>SB_47390| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 168
Score = 46.0 bits (104), Expect = 3e-05
Identities = 21/59 (35%), Positives = 36/59 (61%)
Frame = +1
Query: 145 MDKAQIHDIVLVGGSTRIPKVXKLLQDFFNGKELNKSINPXEXXXXXXXXXXXILHGDK 321
+ ++ + ++LVGG+TR PK+ +LL+++F GKE+ + I+P E IL G K
Sbjct: 35 LKQSSMIQVILVGGATRTPKIQQLLKNYFVGKEICRRISPDEVVAYGAAVQASILMGRK 93
>SB_24074| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 87
Score = 35.1 bits (77), Expect = 0.050
Identities = 16/38 (42%), Positives = 26/38 (68%)
Frame = +1
Query: 157 QIHDIVLVGGSTRIPKVXKLLQDFFNGKELNKSINPXE 270
+I + +VGGSTRIP + ++++ F GKEL ++N E
Sbjct: 6 EIDSVEIVGGSTRIPAIKDIIKNVF-GKELMTTMNADE 42
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 32.3 bits (70), Expect = 0.35
Identities = 18/58 (31%), Positives = 31/58 (53%)
Frame = +1
Query: 1 AQAXIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIV 174
++ I I+ E D + + RA+FEEL ADL + P+ +L A+ K + ++V
Sbjct: 339 SEIPINIECFMEDKDVHGRMKRAQFEELAADLLKLVEAPLRSAL--AQSGKYSVKNVV 394
>SB_26282| Best HMM Match : Tctex-1 (HMM E-Value=3.1e-14)
Length = 273
Score = 31.5 bits (68), Expect = 0.62
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = -3
Query: 375 TEGKGCYIKQQQIXHLLRLVTVQDSSLDSCTISYGLXRVNRFVELLSIKEIL 220
T G I+QQQ LRLVT Q + ++ + L ++ FV LL K ++
Sbjct: 9 TAGAAVAIEQQQDSAYLRLVTPQRTETETYVVLCNLRQLQTFVSLLIAKYLI 60
>SB_8849| Best HMM Match : F-box (HMM E-Value=0.86)
Length = 1222
Score = 31.1 bits (67), Expect = 0.81
Identities = 18/52 (34%), Positives = 32/52 (61%)
Frame = -3
Query: 450 CXSLFSGDGSVTLDECGHDTSSSLNTEGKGCYIKQQQIXHLLRLVTVQDSSL 295
C S F DG+V LDE + +++SL++ G C + ++ + + TV++SSL
Sbjct: 1155 CDSEF--DGAVLLDEWNYGSNASLSSCGSTC--SESRLSYFIGQDTVEESSL 1202
>SB_25455| Best HMM Match : DUF948 (HMM E-Value=0.11)
Length = 260
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +1
Query: 19 IDSLFEGIDFYTSITRARFEELNAD--LFRSTMEPVEKSLRD 138
+DSL +DF T+ T A F +LN R T+ + SL +
Sbjct: 168 LDSLAVRVDFTTNTTNALFTQLNTTDAAIRDTLSQINSSLSE 209
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,450,439
Number of Sequences: 59808
Number of extensions: 357537
Number of successful extensions: 3244
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3231
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1657237625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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