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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0988
         (650 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)                      237   6e-63
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)             227   8e-60
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)                       214   6e-56
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)                      188   5e-48
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)             124   6e-29
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)                 97   1e-20
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)                 81   6e-16
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)              66   2e-11
SB_47390| Best HMM Match : No HMM Matches (HMM E-Value=.)              46   3e-05
SB_24074| Best HMM Match : No HMM Matches (HMM E-Value=.)              35   0.050
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)              32   0.35 
SB_26282| Best HMM Match : Tctex-1 (HMM E-Value=3.1e-14)               31   0.62 
SB_8849| Best HMM Match : F-box (HMM E-Value=0.86)                     31   0.81 
SB_25455| Best HMM Match : DUF948 (HMM E-Value=0.11)                   28   5.7  

>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
          Length = 1097

 Score =  237 bits (580), Expect = 6e-63
 Identities = 126/203 (62%), Positives = 137/203 (67%), Gaps = 2/203 (0%)
 Frame = +1

Query: 4   QAXIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKM--DKAQIHDIVL 177
           QA IEIDSLFEGIDFYTSITRARFEELN DLF+ T EPVE+++RD+K+   K  IHDIVL
Sbjct: 279 QASIEIDSLFEGIDFYTSITRARFEELNQDLFKKTTEPVEQAIRDSKIPGGKESIHDIVL 338

Query: 178 VGGSTRIPKVXKLLQDFFNGKELNKSINPXEXXXXXXXXXXXILHGDKXXXXXXXXXXXX 357
           VGGSTRIPK+ K+LQ+ F GKELNKSINP E           ILHGDK            
Sbjct: 339 VGGSTRIPKIQKMLQELFGGKELNKSINPDEAVAYGAAVQAAILHGDKDDTVKDLLLLDV 398

Query: 358 XXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPXXLIQVFEGERAMTKR*QLA 537
                GIETAGGVM+ LIKRN             YSDNQP  LIQVFEGER+MT    L 
Sbjct: 399 APLSMGIETAGGVMSVLIKRNSTIPTKQTQTFTTYSDNQPGVLIQVFEGERSMTAHNNLL 458

Query: 538 SVKFELTXIPPAPXGVPQIEVTF 606
             KFELT IPPAP GVPQIEVTF
Sbjct: 459 G-KFELTGIPPAPRGVPQIEVTF 480


>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 746

 Score =  227 bits (554), Expect = 8e-60
 Identities = 117/202 (57%), Positives = 139/202 (68%), Gaps = 1/202 (0%)
 Frame = +1

Query: 4   QAXIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMD-KAQIHDIVLV 180
           QA IEIDSL++GIDFYTSITRARFEE+NA LF+ T+EPVEK+++D+K++ K +I +IV+V
Sbjct: 372 QASIEIDSLYDGIDFYTSITRARFEEMNAHLFKKTLEPVEKAIKDSKLESKEKIDEIVMV 431

Query: 181 GGSTRIPKVXKLLQDFFNGKELNKSINPXEXXXXXXXXXXXILHGDKXXXXXXXXXXXXX 360
           GGSTRIPK+  LLQ+FFNGKELNKSINP E           ILHGDK             
Sbjct: 432 GGSTRIPKIQSLLQNFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEATQDLLLLDVA 491

Query: 361 XXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPXXLIQVFEGERAMTKR*QLAS 540
               G+ETAGGVMT  IKRN             YSDNQ   LIQV+EGER++TK   L  
Sbjct: 492 PLTLGLETAGGVMTAAIKRNTTIPTKQTQTFTTYSDNQTSVLIQVYEGERSLTKDNNLLG 551

Query: 541 VKFELTXIPPAPXGVPQIEVTF 606
            KFEL+ IPPAP GVPQI+VTF
Sbjct: 552 -KFELSGIPPAPRGVPQIDVTF 572


>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
          Length = 640

 Score =  214 bits (522), Expect = 6e-56
 Identities = 109/201 (54%), Positives = 132/201 (65%)
 Frame = +1

Query: 4   QAXIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVG 183
           +A IE+DSLFEGIDFYT I+RARFE+L +DLF S ++PV K+L DAK  K+ IH++VLVG
Sbjct: 280 EASIEVDSLFEGIDFYTKISRARFEDLCSDLFLSCLDPVNKALSDAKFSKSDIHEVVLVG 339

Query: 184 GSTRIPKVXKLLQDFFNGKELNKSINPXEXXXXXXXXXXXILHGDKXXXXXXXXXXXXXX 363
           GSTR+PK+ K+L+++F+GK LNKSINP E           IL GDK              
Sbjct: 340 GSTRVPKIQKMLEEYFSGKSLNKSINPDEAVAYGAAVQAAILSGDKSDEVKDVLLVDVAP 399

Query: 364 XXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPXXLIQVFEGERAMTKR*QLASV 543
              GIETAG VMT LI+RN             YSDNQP   I+VFEGER +TK   L   
Sbjct: 400 LSLGIETAGEVMTKLIERNARIPTKATQTFTTYSDNQPAVTIRVFEGERPLTKHNNLLG- 458

Query: 544 KFELTXIPPAPXGVPQIEVTF 606
           KF+L+ IPPAP GVPQIEVTF
Sbjct: 459 KFDLSGIPPAPRGVPQIEVTF 479


>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
          Length = 1327

 Score =  188 bits (457), Expect = 5e-48
 Identities = 103/201 (51%), Positives = 124/201 (61%)
 Frame = +1

Query: 4    QAXIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVG 183
            QA +EI+S FEG DF   +TRARFEELNA LF+ST++PV+K L DA + K++IH+IVLVG
Sbjct: 976  QARVEIESFFEGEDFSEMLTRARFEELNAKLFKSTLKPVQKVLEDADLKKSEIHEIVLVG 1035

Query: 184  GSTRIPKVXKLLQDFFNGKELNKSINPXEXXXXXXXXXXXILHGDKXXXXXXXXXXXXXX 363
            GSTRIPKV +L++DFF GKE ++ INP E           +L G++              
Sbjct: 1036 GSTRIPKVQQLVKDFFEGKEPSRGINPDEAVAYGAAVQAGVLGGEE--DTGEVVLLDVNP 1093

Query: 364  XXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPXXLIQVFEGERAMTKR*QLASV 543
               GIET GGVMT LI RN              +DNQ    IQVFEGER MTK       
Sbjct: 1094 LTLGIETVGGVMTKLISRNTVIPTKKSQVFSTAADNQNTVTIQVFEGERPMTKDNHPLG- 1152

Query: 544  KFELTXIPPAPXGVPQIEVTF 606
            KF+L  IPPAP GVPQIEVTF
Sbjct: 1153 KFDLNGIPPAPRGVPQIEVTF 1173


>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 766

 Score =  124 bits (299), Expect = 6e-29
 Identities = 73/183 (39%), Positives = 101/183 (55%)
 Frame = +1

Query: 58  ITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVXKLLQDFFNG 237
           ++R++FE L ADL   T+ P +K L+DA+++K +I D++LVGG TR+PKV + +QD F G
Sbjct: 108 LSRSKFESLVADLINRTVGPCKKCLQDAEINKGEIGDVLLVGGMTRMPKVQQTVQDIF-G 166

Query: 238 KELNKSINPXEXXXXXXXXXXXILHGDKXXXXXXXXXXXXXXXXXGIETAGGVMTTLIKR 417
           +  +K++NP E           +L GD                  GIET GGV T LI R
Sbjct: 167 RVPSKAVNPDEAVAIGAAIQGGVLAGD----VKDVLLLDVTPLSLGIETLGGVFTKLITR 222

Query: 418 NXXXXXXXXXXXXXYSDNQPXXLIQVFEGERAMTKR*QLASVKFELTXIPPAPXGVPQIE 597
           N              +D Q    I+VF+GER M    +L   +F+L  IPPAP GVPQ+E
Sbjct: 223 NTTIPTKKSQVFSTAADGQTQVEIKVFQGEREMAIDNKLLG-QFQLVGIPPAPRGVPQVE 281

Query: 598 VTF 606
           VTF
Sbjct: 282 VTF 284


>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
          Length = 212

 Score = 96.7 bits (230), Expect = 1e-20
 Identities = 57/153 (37%), Positives = 81/153 (52%)
 Frame = +1

Query: 58  ITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVXKLLQDFFNG 237
           ++R++FE L ADL   T+ P +K L+DA+++K +I D++LVGG TR+PKV + +QD F G
Sbjct: 53  LSRSKFESLVADLINRTVGPCKKCLQDAEINKGEIGDVLLVGGMTRMPKVQQTVQDIF-G 111

Query: 238 KELNKSINPXEXXXXXXXXXXXILHGDKXXXXXXXXXXXXXXXXXGIETAGGVMTTLIKR 417
           +  +K++NP E           +L GD                  GIET GGV T LI R
Sbjct: 112 RVPSKAVNPDEAVAIGAAIQGGVLAGD----VKDVLLLDVTPLSLGIETLGGVFTKLITR 167

Query: 418 NXXXXXXXXXXXXXYSDNQPXXLIQVFEGERAM 516
           N              +D Q    I+VF+GER M
Sbjct: 168 NTTIPTKKSQVFSTAADGQTQVEIKVFQGEREM 200


>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
          Length = 437

 Score = 81.4 bits (192), Expect = 6e-16
 Identities = 35/85 (41%), Positives = 60/85 (70%), Gaps = 3/85 (3%)
 Frame = +1

Query: 19  IDSLFEG---IDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGS 189
           + SL EG   + F  +I+R  FE +N DLF+  ++P+ + L + ++ K ++ ++VLVGGS
Sbjct: 314 LPSLSEGKKIVKFKETISRKMFETINEDLFKKVLQPIRRVLAEVELPKEEVDEVVLVGGS 373

Query: 190 TRIPKVXKLLQDFFNGKELNKSINP 264
           TR+PK+ +L+Q+FF+GK  N +I+P
Sbjct: 374 TRVPKIRQLIQEFFDGKPPNVAIDP 398


>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1019

 Score = 66.5 bits (155), Expect = 2e-11
 Identities = 34/85 (40%), Positives = 46/85 (54%)
 Frame = +1

Query: 16  EIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTR 195
           +I+ +F+G DF   +TR   EE+  DLF     PV ++L+ A M    I  +VLVGG  R
Sbjct: 267 QIEGVFDGKDFRVKVTREELEEMCQDLFDRVAGPVNRALKSASMTMNDIDSVVLVGGGIR 326

Query: 196 IPKVXKLLQDFFNGKELNKSINPXE 270
           +PKV   L       EL K+IN  E
Sbjct: 327 VPKVQDALLRAVKKPELAKNINADE 351


>SB_47390| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 168

 Score = 46.0 bits (104), Expect = 3e-05
 Identities = 21/59 (35%), Positives = 36/59 (61%)
 Frame = +1

Query: 145 MDKAQIHDIVLVGGSTRIPKVXKLLQDFFNGKELNKSINPXEXXXXXXXXXXXILHGDK 321
           + ++ +  ++LVGG+TR PK+ +LL+++F GKE+ + I+P E           IL G K
Sbjct: 35  LKQSSMIQVILVGGATRTPKIQQLLKNYFVGKEICRRISPDEVVAYGAAVQASILMGRK 93


>SB_24074| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 87

 Score = 35.1 bits (77), Expect = 0.050
 Identities = 16/38 (42%), Positives = 26/38 (68%)
 Frame = +1

Query: 157 QIHDIVLVGGSTRIPKVXKLLQDFFNGKELNKSINPXE 270
           +I  + +VGGSTRIP +  ++++ F GKEL  ++N  E
Sbjct: 6   EIDSVEIVGGSTRIPAIKDIIKNVF-GKELMTTMNADE 42


>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1068

 Score = 32.3 bits (70), Expect = 0.35
 Identities = 18/58 (31%), Positives = 31/58 (53%)
 Frame = +1

Query: 1   AQAXIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIV 174
           ++  I I+   E  D +  + RA+FEEL ADL +    P+  +L  A+  K  + ++V
Sbjct: 339 SEIPINIECFMEDKDVHGRMKRAQFEELAADLLKLVEAPLRSAL--AQSGKYSVKNVV 394


>SB_26282| Best HMM Match : Tctex-1 (HMM E-Value=3.1e-14)
          Length = 273

 Score = 31.5 bits (68), Expect = 0.62
 Identities = 18/52 (34%), Positives = 27/52 (51%)
 Frame = -3

Query: 375 TEGKGCYIKQQQIXHLLRLVTVQDSSLDSCTISYGLXRVNRFVELLSIKEIL 220
           T G    I+QQQ    LRLVT Q +  ++  +   L ++  FV LL  K ++
Sbjct: 9   TAGAAVAIEQQQDSAYLRLVTPQRTETETYVVLCNLRQLQTFVSLLIAKYLI 60


>SB_8849| Best HMM Match : F-box (HMM E-Value=0.86)
          Length = 1222

 Score = 31.1 bits (67), Expect = 0.81
 Identities = 18/52 (34%), Positives = 32/52 (61%)
 Frame = -3

Query: 450  CXSLFSGDGSVTLDECGHDTSSSLNTEGKGCYIKQQQIXHLLRLVTVQDSSL 295
            C S F  DG+V LDE  + +++SL++ G  C   + ++ + +   TV++SSL
Sbjct: 1155 CDSEF--DGAVLLDEWNYGSNASLSSCGSTC--SESRLSYFIGQDTVEESSL 1202


>SB_25455| Best HMM Match : DUF948 (HMM E-Value=0.11)
          Length = 260

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = +1

Query: 19  IDSLFEGIDFYTSITRARFEELNAD--LFRSTMEPVEKSLRD 138
           +DSL   +DF T+ T A F +LN      R T+  +  SL +
Sbjct: 168 LDSLAVRVDFTTNTTNALFTQLNTTDAAIRDTLSQINSSLSE 209


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,450,439
Number of Sequences: 59808
Number of extensions: 357537
Number of successful extensions: 3244
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3231
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1657237625
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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