BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brP-0987 (700 letters) Database: tribolium 336 sequences; 122,585 total letters Searching.......................................................done Score E Sequences producing significant alignments: (bits) Value AY695258-1|AAW21975.1| 232|Tribolium castaneum muscle segment h... 24 1.0 EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2 p... 23 3.2 DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7 prot... 23 3.2 AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like prote... 22 4.2 AF225975-1|AAF74117.1| 256|Tribolium castaneum unknown protein. 22 5.5 DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 21 9.7 AY695256-1|AAW21973.1| 168|Tribolium castaneum ventral nerve co... 21 9.7 >AY695258-1|AAW21975.1| 232|Tribolium castaneum muscle segment homeodomain protein protein. Length = 232 Score = 24.2 bits (50), Expect = 1.0 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = +3 Query: 279 PSSLSPTPIQL*RCALREHLRCDPVPRDP 365 P + +PT + RCALR+H + + PR P Sbjct: 94 PQTSAPTGPPIVRCALRKH-KPNRKPRTP 121 >EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2 protein. Length = 535 Score = 22.6 bits (46), Expect = 3.2 Identities = 9/28 (32%), Positives = 14/28 (50%) Frame = -1 Query: 280 GSPLCSPRRCPANACPLYRWIRQRPGYP 197 G+P+C NA L +W + G+P Sbjct: 324 GNPICVQIPWDKNAEALAKWANGQTGFP 351 >DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7 protein. Length = 980 Score = 22.6 bits (46), Expect = 3.2 Identities = 9/25 (36%), Positives = 13/25 (52%) Frame = -1 Query: 277 SPLCSPRRCPANACPLYRWIRQRPG 203 SP+ R P C + W ++RPG Sbjct: 513 SPISKKVRPPQVLCYITSWSQKRPG 537 >AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like protein protein. Length = 314 Score = 22.2 bits (45), Expect = 4.2 Identities = 8/14 (57%), Positives = 10/14 (71%) Frame = +3 Query: 267 HRGEPSSLSPTPIQ 308 H GEP+ L+P IQ Sbjct: 217 HTGEPTDLTPEQIQ 230 >AF225975-1|AAF74117.1| 256|Tribolium castaneum unknown protein. Length = 256 Score = 21.8 bits (44), Expect = 5.5 Identities = 13/39 (33%), Positives = 19/39 (48%) Frame = +3 Query: 321 ALREHLRCDPVPRDPLPEG*RWNASGLPAGEEXHHPRHQ 437 A R+ ++ P PLP +N P ++ HHP HQ Sbjct: 16 AARDFVQGYPASVQPLPR--HFN----PPSDKLHHPIHQ 48 >DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation protein. Length = 947 Score = 21.0 bits (42), Expect = 9.7 Identities = 8/28 (28%), Positives = 13/28 (46%) Frame = -1 Query: 286 DDGSPLCSPRRCPANACPLYRWIRQRPG 203 ++G+ C CP CP + + PG Sbjct: 699 ENGNNKCFTMECPQVTCPDNMKLEKVPG 726 >AY695256-1|AAW21973.1| 168|Tribolium castaneum ventral nerve cord defective protein protein. Length = 168 Score = 21.0 bits (42), Expect = 9.7 Identities = 8/16 (50%), Positives = 11/16 (68%) Frame = -1 Query: 301 GVGDNDDGSPLCSPRR 254 G+ D + +PL SPRR Sbjct: 103 GMHDQQNNNPLPSPRR 118 Database: tribolium Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 122,585 Number of sequences in database: 336 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 163,361 Number of Sequences: 336 Number of extensions: 3870 Number of successful extensions: 7 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 7 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7 length of database: 122,585 effective HSP length: 55 effective length of database: 104,105 effective search space used: 18426585 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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