Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0987
(700 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0142 - 1121762-1122822,1123087-1123114 135 3e-32
01_06_1721 - 39426957-39428005,39428812-39428839 134 6e-32
05_04_0255 + 19462668-19462695,19463443-19464491 134 8e-32
06_03_0718 + 23840198-23840409,23841368-23841518,23842190-238422... 132 3e-31
11_01_0448 - 3469398-3469676,3470015-3470284,3470386-3470476,347... 122 3e-28
12_01_0448 + 3537661-3538018,3538920-3539047,3539740-3539763,354... 77 2e-14
02_05_0688 - 30918499-30919602 32 0.38
03_05_1085 + 30275567-30276178,30277024-30278680,30278835-30278968 31 0.67
07_03_1107 - 24024387-24024497,24025799-24026410 31 1.2
06_01_0093 - 776567-777335,777449-777747 30 1.5
10_05_0101 - 9167383-9167679,9167883-9167961,9168161-9168326,916... 30 2.0
01_01_0516 + 3778891-3779069,3779436-3779541,3780526-3780888 30 2.0
02_05_1121 + 34262019-34262040,34262144-34262211,34262909-342630... 29 3.5
06_01_1052 + 8312752-8312862,8312969-8313041,8313285-8313362,831... 29 4.7
01_01_0382 + 2965324-2966346 29 4.7
10_08_0570 + 18851451-18851723,18851894-18851928,18851929-188519... 28 6.2
07_03_0318 - 16721615-16722154 28 6.2
01_01_1067 + 8403584-8404195,8404532-8404693,8404837-8405346,840... 28 6.2
01_01_0366 + 2871188-2871655 28 6.2
01_01_0364 - 2856598-2857059 28 6.2
01_01_0362 - 2843659-2844468,2844669-2844699,2844824-2844903,284... 28 6.2
01_01_0360 - 2837046-2837507 28 6.2
01_01_0562 + 4126368-4128196,4128517-4128715,4128827-4128886,412... 24 8.1
11_05_0004 - 18269416-18269473,18270319-18270509,18271061-182720... 28 8.2
11_04_0454 - 17895935-17896093,17896878-17896911,17897114-178972... 28 8.2
10_06_0039 - 9966744-9967535,9968241-9968482,9969021-9969223,996... 28 8.2
06_03_0319 + 19537529-19538056 28 8.2
06_02_0240 + 13397512-13397856 28 8.2
02_02_0096 - 6727844-6727957,6728149-6728247,6728332-6728410,672... 28 8.2
>08_01_0142 - 1121762-1122822,1123087-1123114
Length = 362
Score = 135 bits (327), Expect = 3e-32
Identities = 81/167 (48%), Positives = 97/167 (58%), Gaps = 1/167 (0%)
Frame = +1
Query: 151 QEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDAVLSE 330
++EL + A I P KGILAADESTGT+GKRL IGVEN EENRR R+LLF++ L +
Sbjct: 9 KDELIRNAAYIGTPGKGILAADESTGTIGKRLASIGVENVEENRRALRELLFTAPGAL-D 67
Query: 331 NISGVILFHETLYQKADDGTPLVSLLEKXGIIPGIKVDKGVVPLFGSEDECTTPG-SGRP 507
+SGVILF ETLYQ DGTP V +L G++ GIKVDKG V L G++ E TT G G
Sbjct: 68 CLSGVILFEETLYQSTRDGTPFVDVLAAAGVLAGIKVDKGTVELAGTDRETTTQGHDGLG 127
Query: 508 RPALRPVQEGPAATSPSGVAC*RSAATPPRTKLXRKTANVLARYAXI 648
R G V A++ P A LARYA I
Sbjct: 128 ERCRRYYAAGARFAKWRAVLSIGRASSRPSQLAVDANAQGLARYAII 174
>01_06_1721 - 39426957-39428005,39428812-39428839
Length = 358
Score = 134 bits (324), Expect = 6e-32
Identities = 67/115 (58%), Positives = 83/115 (72%)
Frame = +1
Query: 151 QEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDAVLSE 330
++EL K A I P KGILAADESTGT+GKR I VEN EENRR R+LLF++ L +
Sbjct: 9 KDELIKNAAYIGTPGKGILAADESTGTIGKRFASINVENVEENRRSLRELLFTTPGAL-Q 67
Query: 331 NISGVILFHETLYQKADDGTPLVSLLEKXGIIPGIKVDKGVVPLFGSEDECTTPG 495
++SGVILF ETLYQK DG P V +L++ G++PGIKVDKG V + G+ E TT G
Sbjct: 68 HLSGVILFEETLYQKTKDGKPFVDVLKEGGVLPGIKVDKGTVEVAGTNKETTTQG 122
Score = 39.1 bits (87), Expect = 0.003
Identities = 24/54 (44%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = +3
Query: 540 GCHFAKWRCVLKIGRNTPSYQAXQENG*CARPVRLHXVKSQR--IVPIVEPRSL 695
G FAKWR VLKIG N PS + N A+ + + + Q +VPIVEP L
Sbjct: 137 GARFAKWRAVLKIGPNEPSQLSIDLN---AQGLARYAIICQENGLVPIVEPEIL 187
>05_04_0255 + 19462668-19462695,19463443-19464491
Length = 358
Score = 134 bits (323), Expect = 8e-32
Identities = 67/115 (58%), Positives = 82/115 (71%)
Frame = +1
Query: 151 QEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDAVLSE 330
++EL K A I P KGILAADESTGT+GKR I VEN EENRR R+LLF + L +
Sbjct: 9 KDELIKNAAYIGTPGKGILAADESTGTIGKRFASINVENVEENRRSLRELLFCTPGAL-Q 67
Query: 331 NISGVILFHETLYQKADDGTPLVSLLEKXGIIPGIKVDKGVVPLFGSEDECTTPG 495
+SGVILF ETLYQK DG P V +L++ G++PGIKVDKG + + G+E E TT G
Sbjct: 68 YLSGVILFEETLYQKTKDGKPFVDVLKEGGVLPGIKVDKGTIEVAGTEKETTTQG 122
Score = 40.3 bits (90), Expect = 0.001
Identities = 25/54 (46%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = +3
Query: 540 GCHFAKWRCVLKIGRNTPSYQAXQENG*CARPVRLHXVKSQR--IVPIVEPRSL 695
G FAKWR VLKIG N PS A N A+ + + + Q +VPIVEP L
Sbjct: 137 GARFAKWRAVLKIGPNEPSQLAIDLN---AQGLARYAIICQENGLVPIVEPEIL 187
>06_03_0718 +
23840198-23840409,23841368-23841518,23842190-23842294,
23843476-23843608,23844164-23844849,23844937-23845299
Length = 549
Score = 132 bits (319), Expect = 3e-31
Identities = 76/164 (46%), Positives = 93/164 (56%)
Frame = +1
Query: 157 ELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDAVLSENI 336
EL K A+ I P KGILAADESTGT+GKRL I VEN E NR+ R+LLF++ + +
Sbjct: 202 ELIKTAKYIATPGKGILAADESTGTIGKRLASINVENVEPNRQALRELLFTTPGAF-QYL 260
Query: 337 SGVILFHETLYQKADDGTPLVSLLEKXGIIPGIKVDKGVVPLFGSEDECTTPGSGRPRPA 516
SGVILF ETLYQ GTP V +L+ G++PGIKVDKG V + G+ E TT G
Sbjct: 261 SGVILFEETLYQSTAAGTPFVDVLKAGGVVPGIKVDKGTVDIAGTNGETTTQGLDSLGAR 320
Query: 517 LRPVQEGPAATSPSGVAC*RSAATPPRTKLXRKTANVLARYAXI 648
E A + AA P ++ A LARYA I
Sbjct: 321 CAKYYEAGARFAKWRAVLKIGAAGEPSELAVKQNAEGLARYALI 364
>11_01_0448 -
3469398-3469676,3470015-3470284,3470386-3470476,
3470581-3470690,3470867-3471136,3471768-3471914
Length = 388
Score = 122 bits (294), Expect = 3e-28
Identities = 78/182 (42%), Positives = 100/182 (54%), Gaps = 1/182 (0%)
Frame = +1
Query: 154 EELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDAVLSEN 333
+EL K A+ I +P +GILA DES T GKRL IG+ENTE NR+ YR LL ++ L +
Sbjct: 43 DELVKTAKTIASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPG-LGQY 101
Query: 334 ISGVILFHETLYQKADDGTPLVSLLEKXGIIPGIKVDKGVVPLFGSEDECTTPG-SGRPR 510
ISG ILF ETLYQ DG +V +L + I+PGIKVDKG+VPL GS +E G G
Sbjct: 102 ISGAILFEETLYQSTVDGKKIVDILTEQKIVPGIKVDKGLVPLAGSNNESWCQGLDGLAS 161
Query: 511 PALRPVQEGPAATSPSGVAC*RSAATPPRTKLXRKTANVLARYAXIXSKASASCRLSSPX 690
Q+G V S P ++ A LARYA I S+ + + P
Sbjct: 162 REAAYYQQGARFAKWRTVV---SIPNGPSELAVKEAAWGLARYAAI-SQDNGLVPIVEPE 217
Query: 691 VL 696
+L
Sbjct: 218 IL 219
>12_01_0448 +
3537661-3538018,3538920-3539047,3539740-3539763,
3542051-3542317,3542994-3543530
Length = 437
Score = 76.6 bits (180), Expect = 2e-14
Identities = 41/88 (46%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Frame = +1
Query: 235 GKRLQDIGVE-NTEENRRRYRQLLFSSDAVLSENISGVILFHETLYQKADDGTPLVSLLE 411
G+ +D+ E + NR+ YR LL ++ L + ISG ILF ETLYQ DG +V +L
Sbjct: 176 GRVERDVREEAGVDRNRQAYRTLLVTAPG-LGQYISGAILFEETLYQSTVDGRRIVDVLA 234
Query: 412 KXGIIPGIKVDKGVVPLFGSEDECTTPG 495
+ GI+PGI VDKG+VPL GS+ E G
Sbjct: 235 EQGIVPGINVDKGLVPLAGSDPESLEDG 262
>02_05_0688 - 30918499-30919602
Length = 367
Score = 32.3 bits (70), Expect = 0.38
Identities = 18/48 (37%), Positives = 22/48 (45%)
Frame = -3
Query: 623 LAVFLXSLVRGGVAADLQHATPLGEVAAGPSCTGRSAGRGRPDPGVVH 480
L V + ++V G V A L E G C AG G DPG+VH
Sbjct: 7 LVVVVVAVVVGDVGAALPRFAEAPEYRNGEGCPAAVAGAGVCDPGLVH 54
>03_05_1085 + 30275567-30276178,30277024-30278680,30278835-30278968
Length = 800
Score = 31.5 bits (68), Expect = 0.67
Identities = 18/66 (27%), Positives = 34/66 (51%)
Frame = +1
Query: 238 KRLQDIGVENTEENRRRYRQLLFSSDAVLSENISGVILFHETLYQKADDGTPLVSLLEKX 417
+R Q I V N+ + + +L+ + + V + +I+ TL+Q + DG P+ LL+
Sbjct: 582 RRSQFIDVFNSSPDETAFFRLMLNREGV----VGSLIMIQPTLFQYSFDGPPIPVLLDVS 637
Query: 418 GIIPGI 435
I P +
Sbjct: 638 SISPDV 643
>07_03_1107 - 24024387-24024497,24025799-24026410
Length = 240
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/63 (31%), Positives = 32/63 (50%)
Frame = -3
Query: 635 RASTLAVFLXSLVRGGVAADLQHATPLGEVAAGPSCTGRSAGRGRPDPGVVHSSSDPNSG 456
RA+ L + L LV +A Q ATP AA P+ T ++ + P P +++ P +
Sbjct: 3 RAAALCLALLCLVAASASA--QKATPTP--AAAPATTPPASSKKTPAPAAAPTTTTPPAA 58
Query: 455 TTP 447
+TP
Sbjct: 59 STP 61
>06_01_0093 - 776567-777335,777449-777747
Length = 355
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = -3
Query: 482 HSSSDPNSGTTPLSTLMPGMM 420
HSSSDP S + PL +L+P M+
Sbjct: 71 HSSSDPMSASNPLVSLLPAMV 91
>10_05_0101 -
9167383-9167679,9167883-9167961,9168161-9168326,
9169201-9169299,9169969-9171361
Length = 677
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +3
Query: 510 PSAAPSTRRTGCHFAKWRCVLKIGRNTPSYQAXQENG*CAR 632
P P C FAK RC+L++ P+ A + G C R
Sbjct: 457 PGDTPDYHVGTCTFAKKRCILRLYSIVPTDHAFKTQGSCTR 497
>01_01_0516 + 3778891-3779069,3779436-3779541,3780526-3780888
Length = 215
Score = 29.9 bits (64), Expect = 2.0
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = -3
Query: 251 SCKRLPIVPVDSSAARIPFAG 189
+C +LP+VP+D++AA FAG
Sbjct: 142 TCDKLPVVPLDAAAAHSIFAG 162
>02_05_1121 +
34262019-34262040,34262144-34262211,34262909-34263067,
34263146-34263313,34264125-34264278,34264845-34264924,
34265567-34265839,34265956-34266099,34266750-34266884,
34266994-34267092,34267530-34267586,34267673-34267877,
34268159-34268277,34268779-34268877,34268964-34269203
Length = 673
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = +1
Query: 202 ILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDAVLSENISGVILFHETLYQKA 378
ILA++E++ GK+ +D +++ + LL +LSE +S + H L QKA
Sbjct: 515 ILASNENSRRKGKKKKDHSKDSSRDTAFPSSCLLLQCYVLLSEGLSMRFIQHFDLLQKA 573
>06_01_1052 +
8312752-8312862,8312969-8313041,8313285-8313362,
8313443-8313523,8313706-8313779,8313865-8313919,
8314031-8314079,8314222-8314359,8314455-8314536,
8315131-8315209,8315357-8315400,8315479-8315673,
8316110-8316185,8317427-8317507,8317623-8317703,
8318128-8318204,8318402-8318499,8318672-8318809,
8319397-8319478,8319564-8319642,8319885-8319931,
8320014-8320228,8320330-8320450,8320529-8320648,
8320731-8320849,8320964-8321036,8321112-8321231,
8321538-8321606,8321756-8321926,8322004-8322051,
8322192-8322333,8323244-8323341,8323684-8323828,
8323928-8324013,8324112-8324222,8324456-8324530,
8324836-8324901,8325036-8325224,8325315-8325425,
8326616-8326696,8327192-8327371
Length = 1385
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/33 (51%), Positives = 21/33 (63%)
Frame = -3
Query: 245 KRLPIVPVDSSAARIPFAGATIA*AIFLSSSCS 147
K L IV +SS ARIP ++IA +FLS S S
Sbjct: 562 KDLGIVSHESSNARIPLHVSSIAHQLFLSGSAS 594
>01_01_0382 + 2965324-2966346
Length = 340
Score = 28.7 bits (61), Expect = 4.7
Identities = 18/60 (30%), Positives = 25/60 (41%)
Frame = -3
Query: 599 VRGGVAADLQHATPLGEVAAGPSCTGRSAGRGRPDPGVVHSSSDPNSGTTPLSTLMPGMM 420
V G AA VAAG G + G G D +V D GT P + ++ G++
Sbjct: 76 VAGAAAAGAPIGASTIPVAAGAGAVGMNGGGGGGDHPMVFFMHDILGGTNPSARIVAGIV 135
>10_08_0570 +
18851451-18851723,18851894-18851928,18851929-18851998,
18852089-18852187,18852276-18852365,18852430-18852920,
18853015-18853102,18853204-18853245,18853548-18853574,
18853817-18853996,18854249-18854416,18854501-18854710
Length = 590
Score = 28.3 bits (60), Expect = 6.2
Identities = 19/44 (43%), Positives = 20/44 (45%), Gaps = 5/44 (11%)
Frame = -2
Query: 591 GCCGRSSARNATWRSGSR----SFLYWAQRWARSSRPW-GGAFV 475
G CGRS R RS R S W + R S PW GGA V
Sbjct: 19 GGCGRSYGRGGCGRSYGRGSGGSSRSWERERRRQSEPWEGGAAV 62
>07_03_0318 - 16721615-16722154
Length = 179
Score = 28.3 bits (60), Expect = 6.2
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +1
Query: 427 PGIKVDKGVVPLFGSEDECTTPGSGRPRPALRPVQEGPAATSPSGVAC*RSAA 585
PG+ G G+ D+ G+ P PA+ P G A T+ S VA +AA
Sbjct: 98 PGMVATAGAPAPAGTADKVAPLGT--PAPAVSPAAAGTAGTAASAVATAGTAA 148
>01_01_1067 +
8403584-8404195,8404532-8404693,8404837-8405346,
8405434-8405493,8405721-8406137,8406576-8407100
Length = 761
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -3
Query: 500 PDPGVVHSSSDPNSGTTPLSTLMPGMMPFFSS 405
PD G+ H S +S T L L M FF+S
Sbjct: 615 PDSGIYHLSDSSSSSGTSLRRLRSAMSTFFNS 646
>01_01_0366 + 2871188-2871655
Length = 155
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/23 (52%), Positives = 18/23 (78%), Gaps = 1/23 (4%)
Frame = -1
Query: 412 SPAGR-PEAFHRQPSGKGSRGTG 347
+PAG+ P+A R P+GKG +G+G
Sbjct: 27 APAGKKPKAEKRLPAGKGEKGSG 49
>01_01_0364 - 2856598-2857059
Length = 153
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/23 (52%), Positives = 18/23 (78%), Gaps = 1/23 (4%)
Frame = -1
Query: 412 SPAGR-PEAFHRQPSGKGSRGTG 347
+PAG+ P+A R P+GKG +G+G
Sbjct: 27 APAGKKPKAEKRLPAGKGEKGSG 49
>01_01_0362 -
2843659-2844468,2844669-2844699,2844824-2844903,
2846680-2847831
Length = 690
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/23 (52%), Positives = 18/23 (78%), Gaps = 1/23 (4%)
Frame = -1
Query: 412 SPAGR-PEAFHRQPSGKGSRGTG 347
+PAG+ P+A R P+GKG +G+G
Sbjct: 564 APAGKKPKAEKRLPAGKGEKGSG 586
>01_01_0360 - 2837046-2837507
Length = 153
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/23 (52%), Positives = 18/23 (78%), Gaps = 1/23 (4%)
Frame = -1
Query: 412 SPAGR-PEAFHRQPSGKGSRGTG 347
+PAG+ P+A R P+GKG +G+G
Sbjct: 27 APAGKKPKAEKRLPAGKGEKGSG 49
>01_01_0562 +
4126368-4128196,4128517-4128715,4128827-4128886,
4129129-4129233,4129987-4130127,4130223-4130285,
4130925-4131152,4131250-4131333,4132000-4132157,
4132252-4132777,4133641-4133700,4133904-4134026,
4134906-4135181,4135282-4135347,4135500-4135631,
4135977-4136798,4137026-4137306,4137564-4137796,
4138022-4138260,4138367-4138558,4138808-4139080,
4139186-4139332
Length = 2078
Score = 24.2 bits (50), Expect(2) = 8.1
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = +3
Query: 396 GLPAGEEXHHPRHQGRQGCRPAVRIRR 476
GLPA E RH G +G + RR
Sbjct: 228 GLPAPSEGSPKRHSGEEGIDYRTKTRR 254
Score = 21.8 bits (44), Expect(2) = 8.1
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 3/37 (8%)
Frame = +3
Query: 255 RRGEHRGEPSSLSPTPIQL*RCALREH---LRCDPVP 356
+R H G S+SP I L C++ H C VP
Sbjct: 152 QREVHLGRVRSVSPLGITLHTCSIGPHAEEFSCAEVP 188
>11_05_0004 -
18269416-18269473,18270319-18270509,18271061-18272004,
18272083-18272254,18272332-18272407,18272498-18272617,
18272795-18272959,18273048-18273138,18273673-18273757,
18273873-18274043,18274151-18274207,18274290-18274385,
18275223-18275365,18275464-18275530
Length = 811
Score = 27.9 bits (59), Expect = 8.2
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = -3
Query: 536 PSCTGRSAGRGRPDPGVVHSSSDPNSGTTPLSTLMPGMMP 417
P G + R RPD V SDP+ PL T P +P
Sbjct: 665 PQTPGATEWR-RPDVTEVEKCSDPSKAMKPLDTPQPDSVP 703
>11_04_0454 -
17895935-17896093,17896878-17896911,17897114-17897252,
17897487-17897561,17897666-17897945
Length = 228
Score = 27.9 bits (59), Expect = 8.2
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = +3
Query: 351 VPRDPLPEG*RWNASGLPAGEEXHHPRHQGRQGCRPAVRIRRRMHHPR 494
V R+PL G R + A HH RH+ R+G +PA RR P+
Sbjct: 9 VSREPLRRG-RQDLRLRQARRRRHHQRHRRRRGGQPAPN-RRGTSSPK 54
>10_06_0039 -
9966744-9967535,9968241-9968482,9969021-9969223,
9969333-9970645
Length = 849
Score = 27.9 bits (59), Expect = 8.2
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = +1
Query: 511 PALRPVQEGPAATSPSGVAC*RSAATPPRTK 603
PA PV AA P RS TPPRT+
Sbjct: 277 PAAAPVPAPAAAAPPPAPPAPRSRRTPPRTR 307
>06_03_0319 + 19537529-19538056
Length = 175
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +3
Query: 408 GEEXHHPRHQGRQGCRPAVRIRRRMHHPRVWTTS 509
G+ H + G QGCR + IR MH+ TS
Sbjct: 131 GDGVHGIQGDGAQGCREEILIRMAMHYMSFSITS 164
>06_02_0240 + 13397512-13397856
Length = 114
Score = 27.9 bits (59), Expect = 8.2
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Frame = +3
Query: 195 KGYPGR*RIHRYNGQAFA---GHRRGEHRGEPSSL 290
+G PG R+HR+ +A + HR EHR PS L
Sbjct: 23 RGLPGTRRLHRHTLEAMSLRRCHRTVEHRTTPSLL 57
>02_02_0096 -
6727844-6727957,6728149-6728247,6728332-6728410,
6728534-6728634,6728740-6728808,6729180-6729220,
6729992-6730836,6730924-6731027,6731479-6732354
Length = 775
Score = 27.9 bits (59), Expect = 8.2
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +3
Query: 390 ASGLPAGEEXHHPRHQGRQGCRP 458
A+G P+GE H PR R +P
Sbjct: 22 AAGAPSGEHHHRPRQHRRSSAQP 44
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,110,968
Number of Sequences: 37544
Number of extensions: 517708
Number of successful extensions: 1824
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1710
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1814
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1792053856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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