Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0987
(700 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_26182| Best HMM Match : Glycolytic (HMM E-Value=0) 179 2e-45
SB_28080| Best HMM Match : Glycolytic (HMM E-Value=0) 179 2e-45
SB_31572| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.39
SB_53762| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_11748| Best HMM Match : Ank (HMM E-Value=1.7e-21) 31 1.2
SB_52129| Best HMM Match : Sec23_trunk (HMM E-Value=0) 30 1.6
SB_51702| Best HMM Match : SURF6 (HMM E-Value=4) 30 2.1
SB_24645| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_46245| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_35660| Best HMM Match : dTDP_sugar_isom (HMM E-Value=0) 29 2.7
SB_59586| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_36428| Best HMM Match : MutS_V (HMM E-Value=2.1e-33) 29 3.6
SB_24473| Best HMM Match : An_peroxidase (HMM E-Value=0) 29 3.6
SB_12185| Best HMM Match : AAA_5 (HMM E-Value=0.002) 29 3.6
SB_33166| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_56221| Best HMM Match : AOX (HMM E-Value=3.6) 28 6.3
SB_9614| Best HMM Match : GBP (HMM E-Value=1e-31) 28 6.3
SB_9510| Best HMM Match : Keratin_B2 (HMM E-Value=3.8e-05) 28 6.3
SB_47897| Best HMM Match : DUF156 (HMM E-Value=2.9) 28 6.3
SB_18385| Best HMM Match : RVT_1 (HMM E-Value=0.2) 28 6.3
SB_54954| Best HMM Match : zf-RanBP (HMM E-Value=2.1) 28 8.4
SB_47880| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_44302| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_35583| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_20978| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_19322| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_18905| Best HMM Match : Nop (HMM E-Value=0) 28 8.4
SB_9840| Best HMM Match : Dynein_heavy (HMM E-Value=1.3) 28 8.4
SB_45434| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_42153| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
>SB_26182| Best HMM Match : Glycolytic (HMM E-Value=0)
Length = 949
Score = 179 bits (435), Expect = 2e-45
Identities = 103/172 (59%), Positives = 118/172 (68%), Gaps = 2/172 (1%)
Frame = +1
Query: 139 TPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDA 318
TPEL+ ELK+IA+AIVA KGILAADESTGTMGKRL +IGVENTEENRR YRQLLF+S
Sbjct: 6 TPELKAELKRIAEAIVADGKGILAADESTGTMGKRLANIGVENTEENRRLYRQLLFTSGK 65
Query: 319 VLSENISGVILFHETLYQKADDGTPLVSLLEKXGIIPGIKVDKGVVPLFGSE-DECTTPG 495
+S ISGVILFHET+YQKADDGTP V LL GIIPGIKVDKGVV L G++ E TT G
Sbjct: 66 EMSNAISGVILFHETVYQKADDGTPFVRLLRDQGIIPGIKVDKGVVVLAGTDAGETTTQG 125
Query: 496 -SGRPRPALRPVQEGPAATSPSGVAC*RSAATPPRTKLXRKTANVLARYAXI 648
G + ++G V + P ++ ANVLARYA I
Sbjct: 126 LDGLGERCAQYKKDGCDFAKWRCVL--KITDYTPSELAMKENANVLARYASI 175
>SB_28080| Best HMM Match : Glycolytic (HMM E-Value=0)
Length = 304
Score = 179 bits (435), Expect = 2e-45
Identities = 103/172 (59%), Positives = 118/172 (68%), Gaps = 2/172 (1%)
Frame = +1
Query: 139 TPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDA 318
TPEL+ ELK+IA+AIVA KGILAADESTGTMGKRL +IGVENTEENRR YRQLLF+S
Sbjct: 6 TPELKAELKRIAEAIVADGKGILAADESTGTMGKRLANIGVENTEENRRLYRQLLFTSGK 65
Query: 319 VLSENISGVILFHETLYQKADDGTPLVSLLEKXGIIPGIKVDKGVVPLFGSE-DECTTPG 495
+S ISGVILFHET+YQKADDGTP V LL GIIPGIKVDKGVV L G++ E TT G
Sbjct: 66 EMSNAISGVILFHETVYQKADDGTPFVRLLRDQGIIPGIKVDKGVVVLAGTDAGETTTQG 125
Query: 496 -SGRPRPALRPVQEGPAATSPSGVAC*RSAATPPRTKLXRKTANVLARYAXI 648
G + ++G V + P ++ ANVLARYA I
Sbjct: 126 LDGLGERCAQYKKDGCDFAKWRCVL--KITDYTPSELAMKENANVLARYASI 175
>SB_31572| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 219
Score = 32.3 bits (70), Expect = 0.39
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = -2
Query: 594 RGCCGRSSARNATWRSGSRSFLYWAQRWA 508
RG GR + WR+G R FLY RWA
Sbjct: 179 RGRGGRGVGLHNAWRAGKRPFLYRGGRWA 207
>SB_53762| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1010
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 7/64 (10%)
Frame = +3
Query: 456 PAVRIRRRMHHPRV-WTTSPSAAPSTRRTGCH----FA--KWRCVLKIGRNTPSYQAXQE 614
P R +M H W + A +T + C FA KWRC K+ TP ++ +
Sbjct: 920 PKWRCNTKMAHATPKWRWNTKMAHATPKWRCDTKIAFATPKWRCNTKMAHATPKWRVQHQ 979
Query: 615 NG*C 626
NG C
Sbjct: 980 NGLC 983
>SB_11748| Best HMM Match : Ank (HMM E-Value=1.7e-21)
Length = 564
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = -3
Query: 563 TPLGEVAAGPSCTGRSAGRGRPDPGVVHSSSDPNSGTTPLSTLMPGMMPFFSSRE 399
TP E+ GP+ GRS+ G + SS+ P+ + ST+ + PF SSR+
Sbjct: 500 TPESEIE-GPATDGRSSS-GSTVKSLHMSSATPSGRSRKFSTISRSVTPFLSSRK 552
>SB_52129| Best HMM Match : Sec23_trunk (HMM E-Value=0)
Length = 942
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 7/58 (12%)
Frame = -3
Query: 590 GVAADLQHATPLGE----VAAGPSCTGRSA---GRGRPDPGVVHSSSDPNSGTTPLST 438
G+A+ QHA P + AG + TG+ A G G P + + P+S T PLS+
Sbjct: 173 GMASSGQHAQPQSQRPVQSIAGSTATGQHATPTGHGIPPSSTPQARAPPHSSTQPLSS 230
>SB_51702| Best HMM Match : SURF6 (HMM E-Value=4)
Length = 260
Score = 29.9 bits (64), Expect = 2.1
Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 6/112 (5%)
Frame = +1
Query: 163 KKIAQAIVAPA-KGILAADESTGTMGKRLQDIGVENT-EENRRRYRQLLFSSDAVLSENI 336
K +A++ +A K E TGT +QD G NT + ++ + + + S VLS +
Sbjct: 92 KHVARSFIAELEKRKQTGKEGTGTDASEMQDSGAVNTCQSDKHVFTKHVAESKVVLSPSS 151
Query: 337 ---SGVILFHE-TLYQKADDGTPLVSLLEKXGIIPGIKVDKGVVPLFGSEDE 480
GV++ E + QK D V+ E G + + G+ L ++E
Sbjct: 152 HGKQGVLMMPEYVVGQKPDKQKKKVTRDESQGSVKSQEKTVGITHLQVEQEE 203
>SB_24645| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 226
Score = 29.9 bits (64), Expect = 2.1
Identities = 27/94 (28%), Positives = 41/94 (43%)
Frame = +1
Query: 124 YFQYPTPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLL 303
Y Q E ELK+ Q+ + I + +S G GK + E EE RY +
Sbjct: 91 YLQMNDEESLPELKRARQSFITMVTRINNSSQSVGKDGKAKTSLFSE--EEKDTRYLVIA 148
Query: 304 FSSDAVLSENISGVILFHETLYQKADDGTPLVSL 405
FS+D S I+ + +T + + D L+SL
Sbjct: 149 FSNDHFTSAFIAESGITRKT--EDSADWLRLISL 180
>SB_46245| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 29.5 bits (63), Expect = 2.7
Identities = 22/62 (35%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Frame = -3
Query: 566 ATPLGEVAAGPSCTGRSAGRGRPDPGVVHSSSD-PNSGTTPLSTLMPGMMPFFSSRETRG 390
A PL VA+ P T S R PD VH +D G PL + +P SS R
Sbjct: 79 ALPLIAVASTPILTSSSLARAAPDLSAVHPYTDLQQFGALPLIS-VPSTPILTSSSLARA 137
Query: 389 VP 384
P
Sbjct: 138 AP 139
Score = 29.1 bits (62), Expect = 3.6
Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = -3
Query: 566 ATPLGEVAAGPSCTGRSAGRGRPDPGVVHSSSD-PNSGTTPLSTLMPGMMPFFSS 405
A PL VA+ P T S R PD VH +D G PL ++ + FSS
Sbjct: 183 ALPLIAVASTPILTSSSLARAAPDLSAVHPYTDLQQFGALPLISVPSTPILTFSS 237
Score = 27.9 bits (59), Expect = 8.4
Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
Frame = -3
Query: 578 DLQH--ATPLGEVAAGPSCTGRSAGRGRPDPGVVHSSSD-PNSGTTPLSTLMPGMMPFFS 408
DLQ A PL V + P T S R PD VH +D G PL ++ P S
Sbjct: 215 DLQQFGALPLISVPSTPILTFSSLARAAPDLSAVHPYTDLQQFGALPLISVPSTFTPDLS 274
Query: 407 SRE 399
+ +
Sbjct: 275 THQ 277
>SB_35660| Best HMM Match : dTDP_sugar_isom (HMM E-Value=0)
Length = 229
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/47 (40%), Positives = 22/47 (46%)
Frame = +1
Query: 385 GTPLVSLLEKXGIIPGIKVDKGVVPLFGSEDECTTPGSGRPRPALRP 525
G P VS E G + + KGV L C+ P SG P PA RP
Sbjct: 53 GMPYVSWYEFAGKVFELAEKKGV--LKNQPQLCSIPTSGYPTPAKRP 97
>SB_59586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +1
Query: 334 ISGVILFHETLYQKADDGTPLVSLL 408
+SG ++ +E L+Q DD TPLV +L
Sbjct: 103 LSGSVVSNEWLHQLMDDSTPLVQIL 127
>SB_36428| Best HMM Match : MutS_V (HMM E-Value=2.1e-33)
Length = 689
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/40 (47%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Frame = -2
Query: 384 IVSLLVKGLVE-QDHTGDVLGEHSVRAE*ELAITTTVLLC 268
+V+LLV G + QD TG V+G+ SV + + I TTVL C
Sbjct: 425 LVALLVFGQCDRQDETG-VVGDISVVVDTRVIIDTTVLKC 463
>SB_24473| Best HMM Match : An_peroxidase (HMM E-Value=0)
Length = 647
Score = 29.1 bits (62), Expect = 3.6
Identities = 22/85 (25%), Positives = 40/85 (47%)
Frame = +1
Query: 88 NTRIKK*STMSTYFQYPTPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVEN 267
NT+ + S + F++P+PE Q+ IA+A + I E + + ++ EN
Sbjct: 49 NTQPRSPSDLLALFRFPSPEAQQ----IARAAEVFERTIQLVHEHVADL--EMVNVTSEN 102
Query: 268 TEENRRRYRQLLFSSDAVLSENISG 342
E N+ + LL + + N+SG
Sbjct: 103 GERNQHSFFDLLSPAYIKMIANLSG 127
>SB_12185| Best HMM Match : AAA_5 (HMM E-Value=0.002)
Length = 3616
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = +1
Query: 145 ELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDAVL 324
E+Q+ L K AQ +V+ +KG+ D + + K + +N E++R R + S D
Sbjct: 1006 EIQQGLNKAAQCVVSVSKGVSQWDRTCRALRKAEKRDDSDN-EDSRSRSASNVGSDDESR 1064
Query: 325 SE 330
SE
Sbjct: 1065 SE 1066
>SB_33166| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 183
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/57 (29%), Positives = 24/57 (42%)
Frame = +2
Query: 524 QYKKDRLPLRQVALRAEDRPQHPLVPSYXGKRLMCSPGTPXXCQKPAHRADCRAPXS 694
+YKK R V R + P+V + CSPG P ++P R +P S
Sbjct: 29 KYKKSAEKRRLVRRRKNYQRCTPVVGMLPRRSNSCSPGDPLVLERPPPRWSSNSPYS 85
>SB_56221| Best HMM Match : AOX (HMM E-Value=3.6)
Length = 361
Score = 28.3 bits (60), Expect = 6.3
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +1
Query: 460 LFGSEDECTTPGS-GRPRPALRPVQEGPAATSPSGVAC*RSAATPPRTKLXRKT 618
++ E + T P + RP+ +L + +G A TSP+G++ T P L R T
Sbjct: 248 IYDKELQWTHPTTHARPKESLTKLPKGTATTSPTGISV--ETPTRPSPPLTRDT 299
>SB_9614| Best HMM Match : GBP (HMM E-Value=1e-31)
Length = 708
Score = 28.3 bits (60), Expect = 6.3
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +3
Query: 153 GGAQEDRSSNCSSRKGYPGR*RIHRYNG-QAFAGHRRGEHRGEPSS 287
GG+Q + +GYPG R + G QA AG G RG P +
Sbjct: 618 GGSQAEAGGMWGGARGYPGTGRKGGHGGSQAKAGGMWGGARGYPGT 663
>SB_9510| Best HMM Match : Keratin_B2 (HMM E-Value=3.8e-05)
Length = 500
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/45 (35%), Positives = 18/45 (40%)
Frame = -3
Query: 596 RGGVAADLQHATPLGEVAAGPSCTGRSAGRGRPDPGVVHSSSDPN 462
RGGV TPLG V AGP G+ V + D N
Sbjct: 227 RGGVTEPYAEKTPLGWVIAGPVSDSEGGGKRILRAHVQEAEDDTN 271
>SB_47897| Best HMM Match : DUF156 (HMM E-Value=2.9)
Length = 430
Score = 28.3 bits (60), Expect = 6.3
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -2
Query: 561 ATWRSGSRSFLYWAQRWA 508
+ WR+G R FLY RWA
Sbjct: 275 SAWRTGKRPFLYRGGRWA 292
>SB_18385| Best HMM Match : RVT_1 (HMM E-Value=0.2)
Length = 351
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/45 (35%), Positives = 18/45 (40%)
Frame = -3
Query: 596 RGGVAADLQHATPLGEVAAGPSCTGRSAGRGRPDPGVVHSSSDPN 462
RGGV TPLG V AGP G+ V + D N
Sbjct: 8 RGGVTEPYAEKTPLGWVMAGPVSDSEGGGKRILRAHVSEAEDDTN 52
>SB_54954| Best HMM Match : zf-RanBP (HMM E-Value=2.1)
Length = 172
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +1
Query: 484 TTPGSGRPRPALRPVQEGPAATSPSGVAC*RSAATPP 594
TTP +G P A P PAAT+P A +A TPP
Sbjct: 119 TTPPTGAP-AATTPPTAAPAATTPPTAA--PAATTPP 152
>SB_47880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 244
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +1
Query: 484 TTPGSGRPRPALRPVQEGPAATSPSGVAC*RSAATPP 594
TTP +G P A P PAAT+P A +A TPP
Sbjct: 186 TTPPTGAP-AATTPPTAAPAATTPPTAA--PAATTPP 219
>SB_44302| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 67
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +1
Query: 484 TTPGSGRPRPALRPVQEGPAATSPSGVAC*RSAATPP 594
TTP +G P A P PAAT+P A +A TPP
Sbjct: 9 TTPPTGAP-AATTPPTAAPAATTPPTAA--PAATTPP 42
>SB_35583| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 989
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/45 (35%), Positives = 18/45 (40%)
Frame = -3
Query: 596 RGGVAADLQHATPLGEVAAGPSCTGRSAGRGRPDPGVVHSSSDPN 462
RGGV TPLG V AGP G+ V + D N
Sbjct: 87 RGGVTEPYAEKTPLGWVIAGPVSYSEGGGKRILRARVSEAEDDTN 131
>SB_20978| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1683
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = -3
Query: 596 RGGVAADLQHATPLGEVAAGPSCTGRSAGR 507
RGGV TPLG V AGP G+
Sbjct: 671 RGGVTEPYAEKTPLGWVIAGPVSDSEGGGK 700
>SB_19322| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4994
Score = 27.9 bits (59), Expect = 8.4
Identities = 22/80 (27%), Positives = 37/80 (46%)
Frame = +1
Query: 304 FSSDAVLSENISGVILFHETLYQKADDGTPLVSLLEKXGIIPGIKVDKGVVPLFGSEDEC 483
+ +DA+ GVIL E ++++D TPL+ L G P ++ + G E
Sbjct: 4499 YIADAMGERYAEGVILNLEATWEESDTKTPLICFL-SMGSDPTGSIE-SLAKRKGIECRA 4556
Query: 484 TTPGSGRPRPALRPVQEGPA 543
+ G G+ A R +Q+ A
Sbjct: 4557 VSMGQGQEVHARRLIQQSCA 4576
>SB_18905| Best HMM Match : Nop (HMM E-Value=0)
Length = 194
Score = 27.9 bits (59), Expect = 8.4
Identities = 22/49 (44%), Positives = 29/49 (59%), Gaps = 6/49 (12%)
Frame = +1
Query: 124 YFQYPTPELQEELKKIAQAIVAPAKGILAA-----DEST-GTMGKRLQD 252
YF + ++++K A IVA AK LAA EST GT+GKRLQ+
Sbjct: 111 YFSPIVQNMPQDMRKKAARIVA-AKCTLAARVDSFHESTEGTIGKRLQE 158
>SB_9840| Best HMM Match : Dynein_heavy (HMM E-Value=1.3)
Length = 196
Score = 27.9 bits (59), Expect = 8.4
Identities = 22/80 (27%), Positives = 37/80 (46%)
Frame = +1
Query: 304 FSSDAVLSENISGVILFHETLYQKADDGTPLVSLLEKXGIIPGIKVDKGVVPLFGSEDEC 483
+ +DA+ GVIL E ++++D TPL+ L G P ++ + G E
Sbjct: 15 YIADAMGERYAEGVILNLEATWEESDTKTPLICFL-SMGSDPTGSIE-SLAKRKGIECRA 72
Query: 484 TTPGSGRPRPALRPVQEGPA 543
+ G G+ A R +Q+ A
Sbjct: 73 VSMGQGQEVHARRLIQQSCA 92
>SB_45434| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +2
Query: 575 DRPQHPLVPSYXGKRLMCSPGTPXXCQKPAHRADCRAPXS 694
DR +H + SY CSPG P ++P R +P S
Sbjct: 20 DRHEHVTICSYRISN-SCSPGDPLVLERPPPRWSSNSPYS 58
>SB_42153| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +1
Query: 484 TTPGSGRPRPALRPVQEGPAATSPSGVAC*RSAATPP 594
TTP +G P A P PAAT+P A +A TPP
Sbjct: 72 TTPPTGAP-AATTPPTAAPAATTPPTAA--PAATTPP 105
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,971,046
Number of Sequences: 59808
Number of extensions: 527734
Number of successful extensions: 2587
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 2355
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2574
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1829596184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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