Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0987
(700 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81115-1|CAB03291.1| 365|Caenorhabditis elegans Hypothetical pr... 177 5e-45
D83738-1|BAA12091.1| 366|Caenorhabditis elegans aldolase Ce1 pr... 177 5e-45
U13070-15|AAC46646.1| 366|Caenorhabditis elegans Hypothetical p... 136 1e-32
U13070-14|AAM22057.1| 259|Caenorhabditis elegans Hypothetical p... 136 1e-32
D83739-1|BAA12092.1| 366|Caenorhabditis elegans aldolase Ce2 pr... 136 1e-32
AC006672-8|AAY43997.1| 125|Caenorhabditis elegans Hypothetical ... 30 1.4
AC084158-18|AAK68583.1| 300|Caenorhabditis elegans Hypothetical... 29 3.2
Z78200-10|CAN86608.1| 1312|Caenorhabditis elegans Hypothetical p... 29 4.2
Z78200-9|CAB01581.1| 1298|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z75312-1|CAA99730.1| 1298|Caenorhabditis elegans RAD50 homologue... 29 4.2
Z81097-3|CAB03167.1| 296|Caenorhabditis elegans Hypothetical pr... 28 5.6
AL110501-7|CAB54508.2| 167|Caenorhabditis elegans Hypothetical ... 28 5.6
AC024775-8|AAK68458.1| 347|Caenorhabditis elegans Hypothetical ... 28 5.6
AC006620-2|AAF39777.1| 117|Caenorhabditis elegans Hypothetical ... 28 5.6
Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical pr... 28 7.4
AF022985-9|AAB69960.1| 314|Caenorhabditis elegans Collagen prot... 28 7.4
AC006672-7|AAM98004.1| 668|Caenorhabditis elegans Hypothetical ... 28 7.4
U50311-12|AAA92315.1| 169|Caenorhabditis elegans Hypothetical p... 27 9.8
AM085500-1|CAJ30198.1| 947|Caenorhabditis elegans autophagy pro... 27 9.8
AF101315-3|AAC69227.1| 880|Caenorhabditis elegans Hypothetical ... 27 9.8
>Z81115-1|CAB03291.1| 365|Caenorhabditis elegans Hypothetical
protein T05D4.1 protein.
Length = 365
Score = 177 bits (432), Expect = 5e-45
Identities = 98/195 (50%), Positives = 128/195 (65%)
Frame = +1
Query: 115 MSTYFQYPTPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYR 294
M++Y Q+ T ++EL+ IA AIV P KGILAADESTG+M KRL IG+ENTEENRR+YR
Sbjct: 1 MASYSQFLTKAQEDELRSIANAIVTPGKGILAADESTGSMDKRLNSIGLENTEENRRKYR 60
Query: 295 QLLFSSDAVLSENISGVILFHETLYQKADDGTPLVSLLEKXGIIPGIKVDKGVVPLFGSE 474
QLLF++ A L++ ISGVI+FHET YQK DDG P +LL++ GIIPGIKVDKGVVP+ G+
Sbjct: 61 QLLFTAGADLNKYISGVIMFHETFYQKTDDGKPFTALLQEQGIIPGIKVDKGVVPMAGTI 120
Query: 475 DECTTPGSGRPRPALRPVQEGPAATSPSGVAC*RSAATPPRTKLXRKTANVLARYAXIXS 654
E TT G ++ A + S+ TP T L ++ A+ LARYA I
Sbjct: 121 GEGTTQGLDDLNARCAQYKKDGAQFAKWRCVHKISSTTPSVTAL-KEIASNLARYASICQ 179
Query: 655 KASASCRLSSPXVLP 699
+ + + P +LP
Sbjct: 180 Q-NGLVPIVEPEILP 193
>D83738-1|BAA12091.1| 366|Caenorhabditis elegans aldolase Ce1
protein.
Length = 366
Score = 177 bits (432), Expect = 5e-45
Identities = 96/195 (49%), Positives = 126/195 (64%)
Frame = +1
Query: 115 MSTYFQYPTPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYR 294
M++Y Q+ T ++EL+ IA AIV P KGILAADESTG+M KRL IG+ENTEENRR+YR
Sbjct: 1 MASYSQFLTKAQEDELRSIANAIVTPGKGILAADESTGSMDKRLNSIGLENTEENRRKYR 60
Query: 295 QLLFSSDAVLSENISGVILFHETLYQKADDGTPLVSLLEKXGIIPGIKVDKGVVPLFGSE 474
QLLF++ A L++ ISGVI+FHET YQK DDG P +LL++ GIIPGIKVDKGVVP+ G+
Sbjct: 61 QLLFTAGADLNKYISGVIMFHETFYQKTDDGKPFTALLQEQGIIPGIKVDKGVVPMAGTI 120
Query: 475 DECTTPGSGRPRPALRPVQEGPAATSPSGVAC*RSAATPPRTKLXRKTANVLARYAXIXS 654
E TT G ++ A + S+ TP T L +N+ +RYA I
Sbjct: 121 GEGTTQGLDDLNARCAQYKKDGAQFAKWRCVHKISSTTPSVTALKEIASNLGSRYASICQ 180
Query: 655 KASASCRLSSPXVLP 699
+ + + P +LP
Sbjct: 181 Q-NGLVPIVEPEILP 194
>U13070-15|AAC46646.1| 366|Caenorhabditis elegans Hypothetical
protein F01F1.12a protein.
Length = 366
Score = 136 bits (329), Expect = 1e-32
Identities = 83/186 (44%), Positives = 109/186 (58%)
Frame = +1
Query: 139 TPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDA 318
T ++EL +IA IV KGILAADESTGT+GKRL I +EN E NR++YRQLLF++
Sbjct: 13 TQAQKDELHQIALKIVQDGKGILAADESTGTIGKRLDAINLENNETNRQKYRQLLFTTPN 72
Query: 319 VLSENISGVILFHETLYQKADDGTPLVSLLEKXGIIPGIKVDKGVVPLFGSEDECTTPGS 498
L+++ISGVIL+ ET +Q D G LL K GI+PGIK+D GVVPL G+ E TT G
Sbjct: 73 -LNQHISGVILYEETFHQSTDKGEKFTDLLIKQGIVPGIKLDLGVVPLAGTIGEGTTQGL 131
Query: 499 GRPRPALRPVQEGPAATSPSGVAC*RSAATPPRTKLXRKTANVLARYAXIXSKASASCRL 678
+ ++G + TP + + ANVLARYA I +A+ +
Sbjct: 132 DKLAERAAAFKKGGCGFAKWRCVLNIGTHTPSHLGML-ENANVLARYASI-CQANGLVPI 189
Query: 679 SSPXVL 696
P VL
Sbjct: 190 VEPEVL 195
>U13070-14|AAM22057.1| 259|Caenorhabditis elegans Hypothetical
protein F01F1.12b protein.
Length = 259
Score = 136 bits (329), Expect = 1e-32
Identities = 83/186 (44%), Positives = 109/186 (58%)
Frame = +1
Query: 139 TPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDA 318
T ++EL +IA IV KGILAADESTGT+GKRL I +EN E NR++YRQLLF++
Sbjct: 13 TQAQKDELHQIALKIVQDGKGILAADESTGTIGKRLDAINLENNETNRQKYRQLLFTTPN 72
Query: 319 VLSENISGVILFHETLYQKADDGTPLVSLLEKXGIIPGIKVDKGVVPLFGSEDECTTPGS 498
L+++ISGVIL+ ET +Q D G LL K GI+PGIK+D GVVPL G+ E TT G
Sbjct: 73 -LNQHISGVILYEETFHQSTDKGEKFTDLLIKQGIVPGIKLDLGVVPLAGTIGEGTTQGL 131
Query: 499 GRPRPALRPVQEGPAATSPSGVAC*RSAATPPRTKLXRKTANVLARYAXIXSKASASCRL 678
+ ++G + TP + + ANVLARYA I +A+ +
Sbjct: 132 DKLAERAAAFKKGGCGFAKWRCVLNIGTHTPSHLGML-ENANVLARYASI-CQANGLVPI 189
Query: 679 SSPXVL 696
P VL
Sbjct: 190 VEPEVL 195
>D83739-1|BAA12092.1| 366|Caenorhabditis elegans aldolase Ce2
protein.
Length = 366
Score = 136 bits (329), Expect = 1e-32
Identities = 83/186 (44%), Positives = 109/186 (58%)
Frame = +1
Query: 139 TPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDA 318
T ++EL +IA IV KGILAADESTGT+GKRL I +EN E NR++YRQLLF++
Sbjct: 13 TQAQKDELHQIALKIVQDGKGILAADESTGTIGKRLDAINLENNETNRQKYRQLLFTTPN 72
Query: 319 VLSENISGVILFHETLYQKADDGTPLVSLLEKXGIIPGIKVDKGVVPLFGSEDECTTPGS 498
L+++ISGVIL+ ET +Q D G LL K GI+PGIK+D GVVPL G+ E TT G
Sbjct: 73 -LNQHISGVILYEETFHQSTDKGEKFTDLLIKQGIVPGIKLDLGVVPLAGTIGEGTTQGL 131
Query: 499 GRPRPALRPVQEGPAATSPSGVAC*RSAATPPRTKLXRKTANVLARYAXIXSKASASCRL 678
+ ++G + TP + + ANVLARYA I +A+ +
Sbjct: 132 DKLAERAAAFKKGGCGFAKWRCVLNIGTHTPSHLGML-ENANVLARYASI-CQANGLVPI 189
Query: 679 SSPXVL 696
P VL
Sbjct: 190 VEPEVL 195
>AC006672-8|AAY43997.1| 125|Caenorhabditis elegans Hypothetical
protein K08D12.7 protein.
Length = 125
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +1
Query: 475 DECTTPGSGRPRPALRPVQEGPAATSPSG 561
DE TP G R A V+E PA +P G
Sbjct: 37 DEAVTPAGGGARVASMAVEEAPATVAPEG 65
>AC084158-18|AAK68583.1| 300|Caenorhabditis elegans Hypothetical
protein Y69A2AR.9 protein.
Length = 300
Score = 29.1 bits (62), Expect = 3.2
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +1
Query: 469 SEDECTTPGSGRPRPALRPVQEGPAATSPSGVAC*RSAATPPRTKLXRKT 618
S+++ +T P PA P GP A+SPS A TPP+T +T
Sbjct: 125 SDEKTSTTEKTNPGPAPGP-GPGPFASSPSPKDVTAEAPTPPKTTKTTQT 173
>Z78200-10|CAN86608.1| 1312|Caenorhabditis elegans Hypothetical
protein T04H1.4b protein.
Length = 1312
Score = 28.7 bits (61), Expect = 4.2
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 12/70 (17%)
Frame = +1
Query: 145 ELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQ-------DIGV-----ENTEENRRR 288
E++E+ +K++ + + ++ T+ +L+ D+GV E TEEN +R
Sbjct: 747 EVREKNRKLSTEMAEEKSNLSKNEKQLETVNAKLKLAEDLQTDVGVIQQLYEQTEENEKR 806
Query: 289 YRQLLFSSDA 318
Y QL+ SD+
Sbjct: 807 YEQLVSESDS 816
>Z78200-9|CAB01581.1| 1298|Caenorhabditis elegans Hypothetical
protein T04H1.4a protein.
Length = 1298
Score = 28.7 bits (61), Expect = 4.2
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 12/70 (17%)
Frame = +1
Query: 145 ELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQ-------DIGV-----ENTEENRRR 288
E++E+ +K++ + + ++ T+ +L+ D+GV E TEEN +R
Sbjct: 733 EVREKNRKLSTEMAEEKSNLSKNEKQLETVNAKLKLAEDLQTDVGVIQQLYEQTEENEKR 792
Query: 289 YRQLLFSSDA 318
Y QL+ SD+
Sbjct: 793 YEQLVSESDS 802
>Z75312-1|CAA99730.1| 1298|Caenorhabditis elegans RAD50 homologue
ceRAD50 protein.
Length = 1298
Score = 28.7 bits (61), Expect = 4.2
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 12/70 (17%)
Frame = +1
Query: 145 ELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQ-------DIGV-----ENTEENRRR 288
E++E+ +K++ + + ++ T+ +L+ D+GV E TEEN +R
Sbjct: 733 EVREKNRKLSTEMAEEKSNLSKNEKQLETVNAKLKLAEDLQTDVGVIQQLYEQTEENEKR 792
Query: 289 YRQLLFSSDA 318
Y QL+ SD+
Sbjct: 793 YEQLVSESDS 802
>Z81097-3|CAB03167.1| 296|Caenorhabditis elegans Hypothetical
protein K07A1.5 protein.
Length = 296
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = -3
Query: 590 GVAADLQHATPLGEVAAGPSCTGRSAGRGRPDPGVVHSSSDPNSGTTP 447
G+A +L A L + P C G+ + RP G SSS N TP
Sbjct: 8 GIALNLATAGSLAAIILLPGCGGK---KNRPAEGESSSSSKGNGAKTP 52
>AL110501-7|CAB54508.2| 167|Caenorhabditis elegans Hypothetical
protein Y79H2A.2 protein.
Length = 167
Score = 28.3 bits (60), Expect = 5.6
Identities = 19/54 (35%), Positives = 24/54 (44%)
Frame = -3
Query: 686 GLDNRHDALAFDXMXAYRASTLAVFLXSLVRGGVAADLQHATPLGEVAAGPSCT 525
G+DN +AL D +AV + LVR + T L VAAGP T
Sbjct: 111 GIDNEDEAL--DRSIVMELIAIAVLILLLVRYYAVLTVYRWTKLPRVAAGPRIT 162
>AC024775-8|AAK68458.1| 347|Caenorhabditis elegans Hypothetical
protein Y41D4A.8 protein.
Length = 347
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +1
Query: 382 DGTPLVSLLEKXGII--PGIKVDKGVVPLFGSEDECT 486
D +PLVS+L G+I P + + VPLF ED CT
Sbjct: 10 DPSPLVSVL---GLIKSPDLMIGSTEVPLFEEEDMCT 43
>AC006620-2|AAF39777.1| 117|Caenorhabditis elegans Hypothetical
protein C51G7.2 protein.
Length = 117
Score = 28.3 bits (60), Expect = 5.6
Identities = 19/54 (35%), Positives = 24/54 (44%)
Frame = -3
Query: 686 GLDNRHDALAFDXMXAYRASTLAVFLXSLVRGGVAADLQHATPLGEVAAGPSCT 525
G+DN +AL D +AV + LVR + T L VAAGP T
Sbjct: 61 GIDNEDEAL--DRSIVMELIAIAVLILLLVRYYAVLTVYRWTKLPRVAAGPRIT 112
>Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.4 protein.
Length = 290
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = -3
Query: 545 AAGPSCTGRSAGRGRPDP-GVVHSSSDPNSGTTPLSTLMPG 426
A GP G+S G G P P G + P + TP + PG
Sbjct: 213 AGGPGQPGQSGGAGAPGPAGAPGAPGGPGNAGTPGTPGAPG 253
>AF022985-9|AAB69960.1| 314|Caenorhabditis elegans Collagen protein
141 protein.
Length = 314
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/41 (36%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = -3
Query: 545 AAGPSCTGRSAGRGRP-DPGVVHSSSDPNSGTTPLSTLMPG 426
A GP G+S G G P PG + P TP + PG
Sbjct: 223 AGGPGQPGQSGGSGTPGQPGAPGAPGHPGQAGTPGTPGAPG 263
>AC006672-7|AAM98004.1| 668|Caenorhabditis elegans Hypothetical
protein K08D12.6 protein.
Length = 668
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +1
Query: 463 FGSEDECTTPGSGRPRPALRPVQEGPAAT-SPSGVA 567
+G E P + P PA PV++ P A +P+ VA
Sbjct: 225 YGDEQVTPAPAAAAPAPADAPVEQAPVAVPAPAPVA 260
>U50311-12|AAA92315.1| 169|Caenorhabditis elegans Hypothetical
protein C25E10.10 protein.
Length = 169
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +1
Query: 466 GSEDECTTPGSGRPRPALRPVQEGPAATSPSGVAC 570
GSED+C+ P P +P EG G AC
Sbjct: 56 GSEDDCSVDPKCVPIPIRKPECEGDEELKACGSAC 90
>AM085500-1|CAJ30198.1| 947|Caenorhabditis elegans autophagy
protein 9 protein.
Length = 947
Score = 27.5 bits (58), Expect = 9.8
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = -3
Query: 509 RGRPDPGVVHSSSDPNSGTTPLSTLMP-GMMPFFSSRETRGVPSSA 375
RG D ++HSSS GTT + P M F+ + G P+ A
Sbjct: 818 RGLHDESIIHSSSRNYGGTTSSFNMHPTAMQSVFAMPDGFGQPAPA 863
>AF101315-3|AAC69227.1| 880|Caenorhabditis elegans Hypothetical
protein T22H9.2a protein.
Length = 880
Score = 27.5 bits (58), Expect = 9.8
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = -3
Query: 509 RGRPDPGVVHSSSDPNSGTTPLSTLMP-GMMPFFSSRETRGVPSSA 375
RG D ++HSSS GTT + P M F+ + G P+ A
Sbjct: 751 RGLHDESIIHSSSRNYGGTTSSFNMHPTAMQSVFAMPDGFGQPAPA 796
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,406,190
Number of Sequences: 27780
Number of extensions: 378991
Number of successful extensions: 1235
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1090
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1217
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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