Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0987
(700 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g26520.1 68417.m03820 fructose-bisphosphate aldolase, cytopla... 140 1e-33
At4g26530.1 68417.m03822 fructose-bisphosphate aldolase, putativ... 136 1e-32
At2g36460.1 68415.m04475 fructose-bisphosphate aldolase, putativ... 134 4e-32
At3g52930.1 68416.m05834 fructose-bisphosphate aldolase, putativ... 129 2e-30
At2g21330.1 68415.m02538 fructose-bisphosphate aldolase, putativ... 125 3e-29
At4g38970.2 68417.m05522 fructose-bisphosphate aldolase, putativ... 123 1e-28
At4g38970.1 68417.m05521 fructose-bisphosphate aldolase, putativ... 123 1e-28
At5g03690.2 68418.m00329 fructose-bisphosphate aldolase, putativ... 122 3e-28
At2g01140.1 68415.m00023 fructose-bisphosphate aldolase, putativ... 122 3e-28
At5g03690.1 68418.m00328 fructose-bisphosphate aldolase, putativ... 121 5e-28
At3g46330.1 68416.m05017 leucine-rich repeat protein kinase, put... 28 5.2
At2g28290.2 68415.m03434 chromatin remodeling protein, putative ... 28 5.2
At2g28290.1 68415.m03433 chromatin remodeling protein, putative ... 28 5.2
At4g39410.1 68417.m05578 WRKY family transcription factor identi... 28 6.8
At1g79860.1 68414.m09329 expressed protein contains Pfam profile... 28 6.8
At1g03380.1 68414.m00317 expressed protein 28 6.8
At5g17970.1 68418.m02108 disease resistance protein (TIR-NBS-LRR... 27 9.0
At3g06360.1 68416.m00734 arabinogalactan-protein (AGP27) 27 9.0
At2g43900.1 68415.m05457 endonuclease/exonuclease/phosphatase fa... 27 9.0
At1g49850.1 68414.m05589 zinc finger (C3HC4-type RING finger) fa... 27 9.0
At1g11760.1 68414.m01349 expressed protein weak similarity to Pf... 27 9.0
At1g07730.2 68414.m00834 disease resistance-responsive family pr... 27 9.0
>At4g26520.1 68417.m03820 fructose-bisphosphate aldolase,
cytoplasmic identical to SP|P22197 Fructose-bisphosphate
aldolase, cytoplasmic isozyme (EC 4.1.2.13) {Arabidopsis
thaliana}
Length = 358
Score = 140 bits (338), Expect = 1e-33
Identities = 82/166 (49%), Positives = 99/166 (59%)
Frame = +1
Query: 151 QEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDAVLSE 330
++EL K A+ I P +GILAADEST T+GKR I VENTE NR+ YR+LLF+S
Sbjct: 9 EDELIKTAKYIATPGRGILAADESTETIGKRFAGINVENTESNRQAYRELLFTSPGSYP- 67
Query: 331 NISGVILFHETLYQKADDGTPLVSLLEKXGIIPGIKVDKGVVPLFGSEDECTTPGSGRPR 510
+SGVILF ETLYQK DG P V LL + G+IPGIKVDKG+V L G+ E TT G
Sbjct: 68 CLSGVILFEETLYQKTSDGKPFVDLLMENGVIPGIKVDKGLVDLAGTNGETTTQGLDSLG 127
Query: 511 PALRPVQEGPAATSPSGVAC*RSAATPPRTKLXRKTANVLARYAXI 648
+ E A A + AT P ++ A VLARYA I
Sbjct: 128 ARCQQYYEA-GARFAKWRAFFKIGATEPSVLSIQEDARVLARYAII 172
>At4g26530.1 68417.m03822 fructose-bisphosphate aldolase, putative
strong similarity to SP|P22197 Fructose-bisphosphate
aldolase, cytoplasmic isozyme (EC 4.1.2.13) {Arabidopsis
thaliana}
Length = 358
Score = 136 bits (329), Expect = 1e-32
Identities = 81/165 (49%), Positives = 96/165 (58%)
Frame = +1
Query: 154 EELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDAVLSEN 333
+EL K A+ I P KGILAADESTGT+GKR I VEN E NR+ R+LLF+S
Sbjct: 10 DELIKTAKYIATPGKGILAADESTGTIGKRFASINVENIESNRQALRELLFTSPGTFP-C 68
Query: 334 ISGVILFHETLYQKADDGTPLVSLLEKXGIIPGIKVDKGVVPLFGSEDECTTPGSGRPRP 513
+SGVILF ETLYQK DG P V LL + G+IPGIKVDKGVV L G+ E TT G
Sbjct: 69 LSGVILFEETLYQKTTDGKPFVELLMENGVIPGIKVDKGVVDLAGTNGETTTQGLDSLGA 128
Query: 514 ALRPVQEGPAATSPSGVAC*RSAATPPRTKLXRKTANVLARYAXI 648
+ + A A + AT P ++ A LARYA I
Sbjct: 129 RCQEYYKA-GARFAKWRAVLKIGATEPSELSIQENAKGLARYAII 172
>At2g36460.1 68415.m04475 fructose-bisphosphate aldolase, putative
similar to PIR|S65073 fructose-bisphosphate aldolase (EC
4.1.2.13) isoenzyme C-1, cytosolic [Oryza sativa];
contains Pfam profile PF00274 Fructose-bisphosphate
aldolase class-I
Length = 358
Score = 134 bits (325), Expect = 4e-32
Identities = 80/170 (47%), Positives = 96/170 (56%)
Frame = +1
Query: 139 TPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDA 318
T + +EL A I P KGILAADESTGT+GKRL I VEN E NRR R+LLF++
Sbjct: 5 TSKFADELIANAAYIGTPGKGILAADESTGTIGKRLASINVENVESNRRALRELLFTTPG 64
Query: 319 VLSENISGVILFHETLYQKADDGTPLVSLLEKXGIIPGIKVDKGVVPLFGSEDECTTPGS 498
L +SGVILF ETLYQK+ DGTP V +L+ G++PGIKVDKG V L G+ E TT G
Sbjct: 65 ALP-CLSGVILFEETLYQKSSDGTPFVDMLKSAGVLPGIKVDKGTVELAGTNGETTTQGL 123
Query: 499 GRPRPALRPVQEGPAATSPSGVAC*RSAATPPRTKLXRKTANVLARYAXI 648
+ E A A + P + A LARYA I
Sbjct: 124 DGLGDRCKKYYEA-GARFAKWRAVLKIGVNEPSQLAIHENAYGLARYAVI 172
>At3g52930.1 68416.m05834 fructose-bisphosphate aldolase, putative
similar to SP|O65735|ALF_CICAR Fructose-bisphosphate
aldolase, cytoplasmic isozyme {Cicer arietinum},
cytosolic aldolase [Fragaria x ananassa] GI:10645188;
contains Pfam profile PF00274 Fructose-bisphosphate
aldolase class-I
Length = 358
Score = 129 bits (311), Expect = 2e-30
Identities = 67/119 (56%), Positives = 82/119 (68%)
Frame = +1
Query: 139 TPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDA 318
T + +EL A I P KGILAADESTGT+GKRL I VEN E NRR R+LLF++
Sbjct: 5 TSKFADELIANAAYIGTPGKGILAADESTGTIGKRLASINVENVETNRRNLRELLFTAPG 64
Query: 319 VLSENISGVILFHETLYQKADDGTPLVSLLEKXGIIPGIKVDKGVVPLFGSEDECTTPG 495
L +SGVILF ETLYQK+ DG V +L++ G++PGIKVDKG V L G++ E TT G
Sbjct: 65 ALP-CLSGVILFEETLYQKSSDGKLFVDILKEGGVLPGIKVDKGTVELAGTDGETTTQG 122
Score = 42.7 bits (96), Expect = 2e-04
Identities = 26/54 (48%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = +3
Query: 540 GCHFAKWRCVLKIGRNTPSYQAXQENG*CARPVRLHXVKSQR--IVPIVEPRSL 695
G FAKWR VLKIG N PS + EN A + + V Q +VPIVEP L
Sbjct: 137 GARFAKWRAVLKIGENEPSEHSIHEN---AYGLARYAVICQENGLVPIVEPEIL 187
>At2g21330.1 68415.m02538 fructose-bisphosphate aldolase, putative
strong similarity to plastidic fructose-bisphosphate
aldolase (EC 4.1.2.13) from Nicotiana paniculata
(NPALDP1) [GI:4827251], Oryza sativa, PIR2:T02057
[SP|Q40677]
Length = 399
Score = 125 bits (301), Expect = 3e-29
Identities = 79/182 (43%), Positives = 99/182 (54%), Gaps = 1/182 (0%)
Frame = +1
Query: 154 EELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDAVLSEN 333
+EL K A+ I +P GI+A DES T GKRL IG+ENTE NR+ YR LL S+ L +
Sbjct: 54 DELVKTAKTIASPGHGIMAMDESNATCGKRLASIGLENTEANRQAYRTLLVSAPG-LGQY 112
Query: 334 ISGVILFHETLYQKADDGTPLVSLLEKXGIIPGIKVDKGVVPLFGSEDECTTPG-SGRPR 510
ISG ILF ETLYQ DG +V +L + I+PGIKVDKG+VPL GS DE G G
Sbjct: 113 ISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLVGSYDESWCQGLDGLAS 172
Query: 511 PALRPVQEGPAATSPSGVAC*RSAATPPRTKLXRKTANVLARYAXIXSKASASCRLSSPX 690
Q+G V S P ++ A LARYA I S+ S + P
Sbjct: 173 RTAAYYQQGARFAKWRTVV---SIPNGPSALAVKEAAWGLARYAAI-SQDSGLVPIVEPE 228
Query: 691 VL 696
++
Sbjct: 229 IM 230
>At4g38970.2 68417.m05522 fructose-bisphosphate aldolase, putative
strong similarity to plastidic fructose-bisphosphate
aldolase (EC 4.1.2.13) from Nicotiana paniculata
(NPALDP1) [GI:4827251], Oryza sativa, PIR2:T02057
[SP|Q40677]
Length = 381
Score = 123 bits (297), Expect = 1e-28
Identities = 77/182 (42%), Positives = 100/182 (54%), Gaps = 1/182 (0%)
Frame = +1
Query: 154 EELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDAVLSEN 333
+EL K A+ I +P +GILA DES T GKRL IG+ENTE NR+ +R LL S+ L +
Sbjct: 53 DELVKTAKTIASPGRGILAMDESNATCGKRLDSIGLENTEANRQAFRTLLVSAPG-LGQY 111
Query: 334 ISGVILFHETLYQKADDGTPLVSLLEKXGIIPGIKVDKGVVPLFGSEDECTTPG-SGRPR 510
+SG ILF ETLYQ +G +V +L + I+PGIKVDKG+VPL GS +E G G
Sbjct: 112 VSGAILFEETLYQSTTEGKKMVDVLVEQNIVPGIKVDKGLVPLVGSNNESWCQGLDGLSS 171
Query: 511 PALRPVQEGPAATSPSGVAC*RSAATPPRTKLXRKTANVLARYAXIXSKASASCRLSSPX 690
Q+G V S P ++ A LARYA I S+ S + P
Sbjct: 172 RTAAYYQQGARFAKWRTVV---SIPNGPSALAVKEAAWGLARYAAI-SQDSGLVPIVEPE 227
Query: 691 VL 696
+L
Sbjct: 228 IL 229
>At4g38970.1 68417.m05521 fructose-bisphosphate aldolase, putative
strong similarity to plastidic fructose-bisphosphate
aldolase (EC 4.1.2.13) from Nicotiana paniculata
(NPALDP1) [GI:4827251], Oryza sativa, PIR2:T02057
[SP|Q40677]
Length = 398
Score = 123 bits (297), Expect = 1e-28
Identities = 77/182 (42%), Positives = 100/182 (54%), Gaps = 1/182 (0%)
Frame = +1
Query: 154 EELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDAVLSEN 333
+EL K A+ I +P +GILA DES T GKRL IG+ENTE NR+ +R LL S+ L +
Sbjct: 53 DELVKTAKTIASPGRGILAMDESNATCGKRLDSIGLENTEANRQAFRTLLVSAPG-LGQY 111
Query: 334 ISGVILFHETLYQKADDGTPLVSLLEKXGIIPGIKVDKGVVPLFGSEDECTTPG-SGRPR 510
+SG ILF ETLYQ +G +V +L + I+PGIKVDKG+VPL GS +E G G
Sbjct: 112 VSGAILFEETLYQSTTEGKKMVDVLVEQNIVPGIKVDKGLVPLVGSNNESWCQGLDGLSS 171
Query: 511 PALRPVQEGPAATSPSGVAC*RSAATPPRTKLXRKTANVLARYAXIXSKASASCRLSSPX 690
Q+G V S P ++ A LARYA I S+ S + P
Sbjct: 172 RTAAYYQQGARFAKWRTVV---SIPNGPSALAVKEAAWGLARYAAI-SQDSGLVPIVEPE 227
Query: 691 VL 696
+L
Sbjct: 228 IL 229
>At5g03690.2 68418.m00329 fructose-bisphosphate aldolase, putative
similar to PIR|S65073 fructose-bisphosphate aldolase (EC
4.1.2.13) isoenzyme C-1, cytosolic [Oryza sativa];
contains Pfam profile PF00274 Fructose-bisphosphate
aldolase class-I
Length = 359
Score = 122 bits (293), Expect = 3e-28
Identities = 63/114 (55%), Positives = 77/114 (67%)
Frame = +1
Query: 154 EELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDAVLSEN 333
+EL A I P KGILAADESTGT+GKR I VEN E NRR R+LLF++ L +
Sbjct: 10 DELIANAAYIGTPGKGILAADESTGTIGKRFVSINVENVESNRRALRELLFTTPGAL-QY 68
Query: 334 ISGVILFHETLYQKADDGTPLVSLLEKXGIIPGIKVDKGVVPLFGSEDECTTPG 495
ISG+ILF ETLYQK G V ++++ G++PGIKVDKG V L G+ E TT G
Sbjct: 69 ISGIILFEETLYQKTASGKLFVDVMKEAGVLPGIKVDKGTVELAGTNGETTTTG 122
Score = 43.2 bits (97), Expect = 2e-04
Identities = 27/54 (50%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = +3
Query: 540 GCHFAKWRCVLKIGRNTPSYQAXQENG*CARPVRLHXVKSQR--IVPIVEPRSL 695
G FAKWR VLKIG N PS A EN A + + V Q +VPIVEP L
Sbjct: 137 GARFAKWRAVLKIGNNEPSELAIHEN---AYGLARYAVICQENGLVPIVEPEIL 187
>At2g01140.1 68415.m00023 fructose-bisphosphate aldolase, putative
similar to plastidic aldolase NPALDP1 from Nicotiana
paniculata [GI:4827251]; contains Pfam profile PF00274
Fructose-bisphosphate aldolase class-I
Length = 391
Score = 122 bits (293), Expect = 3e-28
Identities = 76/182 (41%), Positives = 100/182 (54%), Gaps = 1/182 (0%)
Frame = +1
Query: 154 EELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDAVLSEN 333
+EL K A++I +P +GILA DES T GKRL IG++NTE+NR+ YRQLL ++ L +
Sbjct: 46 DELVKTAKSIASPGRGILAIDESNATCGKRLASIGLDNTEDNRQAYRQLLLTTPG-LGDY 104
Query: 334 ISGVILFHETLYQKADDGTPLVSLLEKXGIIPGIKVDKGVVPLFGSEDECTTPG-SGRPR 510
ISG ILF ETLYQ DG V L I+PGIKVDKG+ PL GS +E G G
Sbjct: 105 ISGSILFEETLYQSTKDGKTFVDCLRDANIVPGIKVDKGLSPLAGSNEESWCQGLDGLAS 164
Query: 511 PALRPVQEGPAATSPSGVAC*RSAATPPRTKLXRKTANVLARYAXIXSKASASCRLSSPX 690
+ ++G V S P ++ A LARYA I S+ + + P
Sbjct: 165 RSAEYYKQGARFAKWRTVV---SVPCGPSALAVKEAAWGLARYAAI-SQDNGLVPIVEPE 220
Query: 691 VL 696
+L
Sbjct: 221 IL 222
>At5g03690.1 68418.m00328 fructose-bisphosphate aldolase, putative
similar to PIR|S65073 fructose-bisphosphate aldolase (EC
4.1.2.13) isoenzyme C-1, cytosolic [Oryza sativa];
contains Pfam profile PF00274 Fructose-bisphosphate
aldolase class-I
Length = 393
Score = 121 bits (291), Expect = 5e-28
Identities = 63/113 (55%), Positives = 76/113 (67%)
Frame = +1
Query: 157 ELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDAVLSENI 336
EL A I P KGILAADESTGT+GKR I VEN E NRR R+LLF++ L + I
Sbjct: 45 ELIANAAYIGTPGKGILAADESTGTIGKRFVSINVENVESNRRALRELLFTTPGAL-QYI 103
Query: 337 SGVILFHETLYQKADDGTPLVSLLEKXGIIPGIKVDKGVVPLFGSEDECTTPG 495
SG+ILF ETLYQK G V ++++ G++PGIKVDKG V L G+ E TT G
Sbjct: 104 SGIILFEETLYQKTASGKLFVDVMKEAGVLPGIKVDKGTVELAGTNGETTTTG 156
Score = 43.2 bits (97), Expect = 2e-04
Identities = 27/54 (50%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = +3
Query: 540 GCHFAKWRCVLKIGRNTPSYQAXQENG*CARPVRLHXVKSQR--IVPIVEPRSL 695
G FAKWR VLKIG N PS A EN A + + V Q +VPIVEP L
Sbjct: 171 GARFAKWRAVLKIGNNEPSELAIHEN---AYGLARYAVICQENGLVPIVEPEIL 221
>At3g46330.1 68416.m05017 leucine-rich repeat protein kinase,
putative similar to light repressible receptor protein
kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376;
contains leucine rich repeat (LRR) domains,
Pfam:PF00560; contains protein kinase domain,
Pfam:PF00069
Length = 878
Score = 28.3 bits (60), Expect = 5.2
Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = +2
Query: 200 VSWPLTNPPVQWASVCRTSAWRTQRRTVVVIANS---YSALTLCSPRTSPV 343
++W TNP +CR +TQ+ T+ + N+ YS L L +T+ +
Sbjct: 317 MTWLTTNPRQCNGGICRMQLTKTQKSTLPPLLNAFEVYSVLQLPQSQTNEI 367
>At2g28290.2 68415.m03434 chromatin remodeling protein, putative (SYD)
similar to transcriptional activator HBRM [Homo sapiens]
GI:414117; contains Pfam profiles PF00271: Helicase
conserved C-terminal domain, PF00176: SNF2 family
N-terminal domain; identical to cDNA putative chromatin
remodeling protein SYD (SPLAYED) GI:13603720
Length = 3529
Score = 28.3 bits (60), Expect = 5.2
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = -3
Query: 563 TPLGEVAAGPSCTGRSAGRGRPDPGVVHSSSDPNSGTTPLST 438
TP+ G S GR AGRGR GV+H S+ + T +T
Sbjct: 1528 TPIRGRGRGRS-RGRGAGRGRRVEGVLHGSNSSITQRTETAT 1568
>At2g28290.1 68415.m03433 chromatin remodeling protein, putative (SYD)
similar to transcriptional activator HBRM [Homo sapiens]
GI:414117; contains Pfam profiles PF00271: Helicase
conserved C-terminal domain, PF00176: SNF2 family
N-terminal domain; identical to cDNA putative chromatin
remodeling protein SYD (SPLAYED) GI:13603720
Length = 3574
Score = 28.3 bits (60), Expect = 5.2
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = -3
Query: 563 TPLGEVAAGPSCTGRSAGRGRPDPGVVHSSSDPNSGTTPLST 438
TP+ G S GR AGRGR GV+H S+ + T +T
Sbjct: 1528 TPIRGRGRGRS-RGRGAGRGRRVEGVLHGSNSSITQRTETAT 1568
>At4g39410.1 68417.m05578 WRKY family transcription factor identical
to WRKY transcription factor 13 GI:15991729 from
[Arabidopsis thaliana]
Length = 304
Score = 27.9 bits (59), Expect = 6.8
Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 3/53 (5%)
Frame = +3
Query: 360 DPLPEG*RWNASGLPAGEEXHHPRHQGR---QGCRPAVRIRRRMHHPRVWTTS 509
D L +G RW G + HPR R CR R+ R PR+ T+
Sbjct: 220 DVLDDGYRWRKYGQKVVKNTQHPRSYYRCTQDKCRVKKRVERLADDPRMVITT 272
>At1g79860.1 68414.m09329 expressed protein contains Pfam profile
PF03759: Domain of unknown function (DUF315)
Length = 515
Score = 27.9 bits (59), Expect = 6.8
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +2
Query: 470 PKTNAPPQGLDDLAQRCAQYKKD 538
P PP GL + ++R QY+KD
Sbjct: 241 PTVKVPPDGLSEASRRFLQYQKD 263
>At1g03380.1 68414.m00317 expressed protein
Length = 926
Score = 27.9 bits (59), Expect = 6.8
Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 2/63 (3%)
Frame = +2
Query: 224 PVQWASVCRTSAW-RTQRRTVVVIA-NSYSALTLCSPRTSPV*SCSTRPFTRRLTMERLW 397
P+QW VCR S W T+ R I Y T+ + TS +C + + ++
Sbjct: 591 PIQWWDVCRRSDWLETEERLPKSITEKQYDLETVSNHLTSHEDACLSLDMNSHFSEDKYL 650
Query: 398 SPC 406
C
Sbjct: 651 KSC 653
>At5g17970.1 68418.m02108 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 780
Score = 27.5 bits (58), Expect = 9.0
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +1
Query: 217 ESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDAVLSE 330
+ TG GK I TEE R+R+RQ L + + E
Sbjct: 118 KQTGDFGKAFDKICDVRTEEERQRWRQALTNVGNIAGE 155
>At3g06360.1 68416.m00734 arabinogalactan-protein (AGP27)
Length = 125
Score = 27.5 bits (58), Expect = 9.0
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -3
Query: 500 PDPGVVHSSSDPNSGTTPLSTLMPGMMPFF 411
PDP S+S P S LS+ PG+ +F
Sbjct: 78 PDPAFAPSASPPASSLASLSSQAPGVFIYF 107
>At2g43900.1 68415.m05457 endonuclease/exonuclease/phosphatase
family protein belongs to Pfam:PF03372:
Endonuclease/Exonuclease/phosphatase family; contains 3
WD-40 repeats (PF00400);similar to Type II
inositol-1,4,5-trisphosphate 5-phosphatase EC 3.1.3.56
(5PTASE) (INPP5B) (SP:P32019) [Homo sapiens]
Length = 1305
Score = 27.5 bits (58), Expect = 9.0
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +3
Query: 165 EDRSSNCSSRKGYPGR*RIHRYNGQAFAGHRRGEHRGEPSSLSPTP 302
+D S+ P +IH Y+ Q A ++G HR SL P
Sbjct: 14 DDEEEALSAMSSVPPPRKIHSYSHQLRATGQKGHHRQRQHSLDDIP 59
>At1g49850.1 68414.m05589 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 250
Score = 27.5 bits (58), Expect = 9.0
Identities = 12/28 (42%), Positives = 14/28 (50%), Gaps = 4/28 (14%)
Frame = +3
Query: 420 HHPRHQGRQGC----RPAVRIRRRMHHP 491
HH + GC RP R+RR HHP
Sbjct: 44 HHNQRHDSDGCDPLRRPTPRLRRFFHHP 71
>At1g11760.1 68414.m01349 expressed protein weak similarity to Pfam
PF01648: 4'-phosphopantetheinyl transferase superfamily
Length = 393
Score = 27.5 bits (58), Expect = 9.0
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +1
Query: 154 EELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYR 294
+ L K + V + G+L + ES G L D +EN +E +R
Sbjct: 28 DSLNKAYEKFVLASAGVLESKESAGGQKALLTDTALENFKEKWELFR 74
>At1g07730.2 68414.m00834 disease resistance-responsive family
protein contains Pfam PF03018: Plant disease resistance
response protein
Length = 389
Score = 27.5 bits (58), Expect = 9.0
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = -3
Query: 560 PLGEVAAGPSCTGRSAGRGRPDPGVVHSSSDPNSGTTPLSTLMPGMMPFFSS 405
P +GP+ TG ++G G G+ S N+G PLST ++P SS
Sbjct: 51 PFPTANSGPA-TGIASGTGSASGGL--GSLGTNTGPGPLSTTGSSLLPVASS 99
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,657,257
Number of Sequences: 28952
Number of extensions: 349753
Number of successful extensions: 1010
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 946
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 988
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1496852856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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