Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0983
(450 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr... 31 0.39
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p... 31 0.39
Z81086-3|CAD56586.1| 711|Caenorhabditis elegans Hypothetical pr... 30 0.89
Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical pr... 30 0.89
Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical pr... 29 1.6
Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical pr... 29 1.6
Z99710-12|CAI79158.1| 333|Caenorhabditis elegans Hypothetical p... 28 2.7
Z32683-4|CAA83629.1| 443|Caenorhabditis elegans Hypothetical pr... 28 2.7
AL034393-28|CAI79175.1| 333|Caenorhabditis elegans Hypothetical... 28 2.7
AF273836-1|AAG15184.1| 362|Caenorhabditis elegans nuclear recep... 28 2.7
AC024776-15|AAK68482.2| 354|Caenorhabditis elegans Nuclear horm... 28 2.7
AF078788-7|AAC26958.1| 227|Caenorhabditis elegans Hypothetical ... 27 4.8
Z68108-19|CAD44153.1| 1895|Caenorhabditis elegans Hypothetical p... 27 8.3
Z68108-18|CAB60299.4| 1868|Caenorhabditis elegans Hypothetical p... 27 8.3
Z68108-17|CAB60298.3| 1898|Caenorhabditis elegans Hypothetical p... 27 8.3
Z54270-6|CAA91028.1| 572|Caenorhabditis elegans Hypothetical pr... 27 8.3
Z50740-6|CAD44124.1| 1895|Caenorhabditis elegans Hypothetical pr... 27 8.3
Z50740-5|CAB60282.4| 1868|Caenorhabditis elegans Hypothetical pr... 27 8.3
Z50740-4|CAB60281.3| 1898|Caenorhabditis elegans Hypothetical pr... 27 8.3
AF179216-1|AAF67040.1| 233|Caenorhabditis elegans NHR-25 protein. 27 8.3
AF179214-1|AAF67038.1| 568|Caenorhabditis elegans NHR-25 alpha ... 27 8.3
AF044576-1|AAC38963.1| 1898|Caenorhabditis elegans phospholipase... 27 8.3
>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical protein
F25H8.3 protein.
Length = 2165
Score = 31.1 bits (67), Expect = 0.39
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 11/76 (14%)
Frame = +1
Query: 166 NREACRYVR-GAWSECDSK----TNIRSRKLTLKKGD--PAN-C-EVVKTIQKKCKR-TC 315
N AC + + G WS+C +K R T + P + C ++ K I K C R +C
Sbjct: 1125 NEHACTWWQFGVWSDCSAKCGDGVQYRDANCTDRHRSVLPEHRCLKMEKIITKPCHRESC 1184
Query: 316 -RYEKSSWSECSINGE 360
+Y+ WS+CS++ E
Sbjct: 1185 PKYKLGEWSQCSVSCE 1200
>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
protein F25H8.3 protein.
Length = 2165
Score = 31.1 bits (67), Expect = 0.39
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 11/76 (14%)
Frame = +1
Query: 166 NREACRYVR-GAWSECDSK----TNIRSRKLTLKKGD--PAN-C-EVVKTIQKKCKR-TC 315
N AC + + G WS+C +K R T + P + C ++ K I K C R +C
Sbjct: 1125 NEHACTWWQFGVWSDCSAKCGDGVQYRDANCTDRHRSVLPEHRCLKMEKIITKPCHRESC 1184
Query: 316 -RYEKSSWSECSINGE 360
+Y+ WS+CS++ E
Sbjct: 1185 PKYKLGEWSQCSVSCE 1200
>Z81086-3|CAD56586.1| 711|Caenorhabditis elegans Hypothetical
protein F53B6.2b protein.
Length = 711
Score = 29.9 bits (64), Expect = 0.89
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 18/79 (22%)
Frame = +1
Query: 166 NREACRYVRGAWSECDSKT----NIRSRKLTLK---KGDPAN-----CEVVKTIQKKCKR 309
N R+ G WSEC KT ++R ++ K G+ N CE + +++ R
Sbjct: 472 NELVARWDIGHWSECRQKTCHVAGYQARGISCKVTFHGEIRNVDNSICESLASVRPPETR 531
Query: 310 TC------RYEKSSWSECS 348
C R+E S WSECS
Sbjct: 532 PCHREDCPRWEASQWSECS 550
>Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical protein
F53B6.2a protein.
Length = 1045
Score = 29.9 bits (64), Expect = 0.89
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 18/79 (22%)
Frame = +1
Query: 166 NREACRYVRGAWSECDSKT----NIRSRKLTLK---KGDPAN-----CEVVKTIQKKCKR 309
N R+ G WSEC KT ++R ++ K G+ N CE + +++ R
Sbjct: 806 NELVARWDIGHWSECRQKTCHVAGYQARGISCKVTFHGEIRNVDNSICESLASVRPPETR 865
Query: 310 TC------RYEKSSWSECS 348
C R+E S WSECS
Sbjct: 866 PCHREDCPRWEASQWSECS 884
>Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 29.1 bits (62), Expect = 1.6
Identities = 25/104 (24%), Positives = 44/104 (42%)
Frame = +1
Query: 115 WEENDHEVLIRSARGAKNREACRYVRGAWSECDSKTNIRSRKLTLKKGDPANCEVVKTIQ 294
W E DH+ L + + + V+G S+ + +T + S KK D + +
Sbjct: 172 WMETDHKELFSITEDGELSDETKKVKGHDSKIEKQT-VPSSSSNPKK-DEHKRNRNRRSR 229
Query: 295 KKCKRTCRYEKSSWSECSINGEMSRTDKLKSNSDSTCDQSRRKT 426
+ + R + S S+ S + SR + SNS S D S ++
Sbjct: 230 SRTRSRERTSRRSRSKESPRSKRSRRSRSSSNSSSESDSSSSRS 273
>Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 29.1 bits (62), Expect = 1.6
Identities = 25/104 (24%), Positives = 44/104 (42%)
Frame = +1
Query: 115 WEENDHEVLIRSARGAKNREACRYVRGAWSECDSKTNIRSRKLTLKKGDPANCEVVKTIQ 294
W E DH+ L + + + V+G S+ + +T + S KK D + +
Sbjct: 172 WMETDHKELFSITEDGELSDETKKVKGHDSKIEKQT-VPSSSSNPKK-DEHKRNRNRRSR 229
Query: 295 KKCKRTCRYEKSSWSECSINGEMSRTDKLKSNSDSTCDQSRRKT 426
+ + R + S S+ S + SR + SNS S D S ++
Sbjct: 230 SRTRSRERTSRRSRSKESPRSKRSRRSRSSSNSSSESDSSSSRS 273
>Z99710-12|CAI79158.1| 333|Caenorhabditis elegans Hypothetical
protein Y18D10A.22 protein.
Length = 333
Score = 28.3 bits (60), Expect = 2.7
Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Frame = -2
Query: 296 FWMVLTTSQLAGSPFFRVNFLERIFVL--ESHSLQAPRTYRHASLF 165
FW +L + QL P F + L E HS TYRH + F
Sbjct: 45 FWNLLESIQLEKHPVMTWKFCNLVHKLLQEGHSTVPQETYRHLNRF 90
>Z32683-4|CAA83629.1| 443|Caenorhabditis elegans Hypothetical
protein R07E5.6 protein.
Length = 443
Score = 28.3 bits (60), Expect = 2.7
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 283 KTIQKKCKRTCRYEKSSWSECSINGEMSRTDKLKSNSDSTC 405
K ++K KR +K+ + SIN EMSR DK + +C
Sbjct: 285 KKKEEKEKRRKEVKKNREEQLSINPEMSRNDKKDVVEEKSC 325
>AL034393-28|CAI79175.1| 333|Caenorhabditis elegans Hypothetical
protein Y18D10A.22 protein.
Length = 333
Score = 28.3 bits (60), Expect = 2.7
Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Frame = -2
Query: 296 FWMVLTTSQLAGSPFFRVNFLERIFVL--ESHSLQAPRTYRHASLF 165
FW +L + QL P F + L E HS TYRH + F
Sbjct: 45 FWNLLESIQLEKHPVMTWKFCNLVHKLLQEGHSTVPQETYRHLNRF 90
>AF273836-1|AAG15184.1| 362|Caenorhabditis elegans nuclear receptor
NHR-92 protein.
Length = 362
Score = 28.3 bits (60), Expect = 2.7
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 217 KTNIRSRKLTLKKGDPANCEVVKTIQKKCKRTCRYEK 327
+T +R + K+ + NC +V TI+ CK+ CRY K
Sbjct: 39 RTVVRGHEYRCKQME--NCLIVSTIRNMCKK-CRYTK 72
>AC024776-15|AAK68482.2| 354|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 92 protein.
Length = 354
Score = 28.3 bits (60), Expect = 2.7
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 217 KTNIRSRKLTLKKGDPANCEVVKTIQKKCKRTCRYEK 327
+T +R + K+ + NC +V TI+ CK+ CRY K
Sbjct: 31 RTVVRGHEYRCKQME--NCLIVSTIRNMCKK-CRYTK 64
>AF078788-7|AAC26958.1| 227|Caenorhabditis elegans Hypothetical
protein ZC190.8 protein.
Length = 227
Score = 27.5 bits (58), Expect = 4.8
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Frame = +1
Query: 217 KTNIRSRKLTLKKGDPANCEVVKTIQKKCKRTCR----YEKSSWSECSINGEMSRTDKLK 384
K+N +S + + G P N + T +K K++ R EK+ +E S + E +TDK +
Sbjct: 158 KSNRKSTDSSTELGSPTNSQYSTTTRKSSKKSTRSDRKMEKTQRNEKSEHTE-EQTDKTE 216
Query: 385 SNSDSTCDQ 411
ST +
Sbjct: 217 KTVKSTASR 225
>Z68108-19|CAD44153.1| 1895|Caenorhabditis elegans Hypothetical
protein F31B12.1c protein.
Length = 1895
Score = 26.6 bits (56), Expect = 8.3
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +3
Query: 72 GPLIGSGSCRRWRGVGGE*P 131
G +G SC+ WR GGE P
Sbjct: 680 GRSVGGRSCKSWRSRGGETP 699
>Z68108-18|CAB60299.4| 1868|Caenorhabditis elegans Hypothetical
protein F31B12.1b protein.
Length = 1868
Score = 26.6 bits (56), Expect = 8.3
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +3
Query: 72 GPLIGSGSCRRWRGVGGE*P 131
G +G SC+ WR GGE P
Sbjct: 680 GRSVGGRSCKSWRSRGGETP 699
>Z68108-17|CAB60298.3| 1898|Caenorhabditis elegans Hypothetical
protein F31B12.1a protein.
Length = 1898
Score = 26.6 bits (56), Expect = 8.3
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +3
Query: 72 GPLIGSGSCRRWRGVGGE*P 131
G +G SC+ WR GGE P
Sbjct: 680 GRSVGGRSCKSWRSRGGETP 699
>Z54270-6|CAA91028.1| 572|Caenorhabditis elegans Hypothetical
protein F11C1.6a protein.
Length = 572
Score = 26.6 bits (56), Expect = 8.3
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +1
Query: 265 ANCEVVKTIQKKCKRTCRYEK 327
ANC V +T +K+C +CR++K
Sbjct: 58 ANCHVDRTCRKRCP-SCRFQK 77
>Z50740-6|CAD44124.1| 1895|Caenorhabditis elegans Hypothetical
protein F31B12.1c protein.
Length = 1895
Score = 26.6 bits (56), Expect = 8.3
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +3
Query: 72 GPLIGSGSCRRWRGVGGE*P 131
G +G SC+ WR GGE P
Sbjct: 680 GRSVGGRSCKSWRSRGGETP 699
>Z50740-5|CAB60282.4| 1868|Caenorhabditis elegans Hypothetical
protein F31B12.1b protein.
Length = 1868
Score = 26.6 bits (56), Expect = 8.3
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +3
Query: 72 GPLIGSGSCRRWRGVGGE*P 131
G +G SC+ WR GGE P
Sbjct: 680 GRSVGGRSCKSWRSRGGETP 699
>Z50740-4|CAB60281.3| 1898|Caenorhabditis elegans Hypothetical
protein F31B12.1a protein.
Length = 1898
Score = 26.6 bits (56), Expect = 8.3
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +3
Query: 72 GPLIGSGSCRRWRGVGGE*P 131
G +G SC+ WR GGE P
Sbjct: 680 GRSVGGRSCKSWRSRGGETP 699
>AF179216-1|AAF67040.1| 233|Caenorhabditis elegans NHR-25 protein.
Length = 233
Score = 26.6 bits (56), Expect = 8.3
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +1
Query: 265 ANCEVVKTIQKKCKRTCRYEK 327
ANC V +T +K+C +CR++K
Sbjct: 58 ANCHVDRTCRKRCP-SCRFQK 77
>AF179214-1|AAF67038.1| 568|Caenorhabditis elegans NHR-25 alpha
protein.
Length = 568
Score = 26.6 bits (56), Expect = 8.3
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +1
Query: 265 ANCEVVKTIQKKCKRTCRYEK 327
ANC V +T +K+C +CR++K
Sbjct: 54 ANCHVDRTCRKRCP-SCRFQK 73
>AF044576-1|AAC38963.1| 1898|Caenorhabditis elegans phospholipase C
PLC210 protein.
Length = 1898
Score = 26.6 bits (56), Expect = 8.3
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +3
Query: 72 GPLIGSGSCRRWRGVGGE*P 131
G +G SC+ WR GGE P
Sbjct: 680 GRSVGGRSCKSWRSRGGETP 699
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,169,112
Number of Sequences: 27780
Number of extensions: 203201
Number of successful extensions: 660
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 624
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 658
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 788595652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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